####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS492_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 18 - 41 4.92 12.92 LCS_AVERAGE: 48.40 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.54 10.94 LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.93 17.22 LCS_AVERAGE: 18.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.92 18.63 LCS_AVERAGE: 12.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 11 3 4 4 6 6 7 8 8 8 8 10 11 16 17 18 18 18 22 22 23 LCS_GDT V 3 V 3 4 6 15 3 4 4 6 6 7 8 8 8 8 11 13 16 17 18 20 22 24 33 33 LCS_GDT Q 4 Q 4 4 6 18 3 4 4 6 6 7 8 9 14 16 18 22 25 28 31 33 34 36 38 39 LCS_GDT G 5 G 5 4 6 20 2 4 4 6 6 8 12 16 18 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT P 6 P 6 4 6 20 1 3 4 6 6 10 14 17 18 21 22 24 27 29 32 34 36 36 38 39 LCS_GDT W 7 W 7 4 6 20 3 3 4 6 6 10 14 17 18 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT V 8 V 8 3 10 20 3 3 9 10 11 12 14 16 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT G 9 G 9 7 10 20 3 6 9 10 11 12 14 16 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT S 10 S 10 7 10 20 4 6 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT S 11 S 11 7 10 20 3 6 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT Y 12 Y 12 7 10 20 3 6 7 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT V 13 V 13 7 10 20 3 6 7 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT A 14 A 14 7 10 20 3 6 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT E 15 E 15 7 10 20 4 4 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT T 16 T 16 5 10 20 4 4 9 10 11 12 14 16 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT G 17 G 17 4 10 21 4 4 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT Q 18 Q 18 4 4 24 3 3 4 4 7 10 14 17 18 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT N 19 N 19 4 10 24 3 3 4 6 7 9 11 13 14 16 18 20 25 28 32 34 36 36 38 39 LCS_GDT W 20 W 20 9 10 24 6 7 9 9 9 9 11 13 16 21 22 23 26 28 31 33 36 36 38 39 LCS_GDT A 21 A 21 9 10 24 6 7 9 9 9 9 11 13 16 20 22 23 27 29 32 34 36 36 38 39 LCS_GDT S 22 S 22 9 10 24 6 7 9 9 9 9 10 11 13 19 22 23 24 27 30 33 34 36 38 39 LCS_GDT L 23 L 23 9 10 24 6 7 9 9 9 9 12 15 18 21 22 24 27 29 32 34 36 36 38 39 LCS_GDT A 24 A 24 9 10 24 6 7 9 9 9 9 11 13 14 15 17 24 27 29 32 34 36 36 38 39 LCS_GDT A 25 A 25 9 10 24 6 7 9 9 9 9 10 11 12 15 17 19 21 23 32 34 36 36 38 39 LCS_GDT N 26 N 26 9 10 24 5 7 9 9 9 9 10 11 13 15 17 19 26 29 32 34 36 36 38 39 LCS_GDT E 27 E 27 9 10 24 5 7 9 9 9 9 11 13 14 15 17 19 21 26 32 34 36 36 38 39 LCS_GDT L 28 L 28 9 10 24 5 5 9 9 9 9 11 13 14 15 17 19 21 23 24 24 32 36 38 38 LCS_GDT R 29 R 29 3 7 24 3 3 5 7 8 9 11 13 14 15 17 19 21 26 32 34 36 36 38 39 LCS_GDT V 30 V 30 3 7 24 0 3 3 5 7 9 11 13 14 15 17 19 23 29 32 34 36 36 38 39 LCS_GDT T 31 T 31 4 7 24 3 4 5 7 8 9 11 16 19 20 23 24 27 29 32 34 36 36 38 39 LCS_GDT E 32 E 32 4 7 24 3 4 5 7 8 9 14 16 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT R 33 R 33 4 7 24 3 4 4 7 8 9 14 16 19 21 23 24 27 29 31 34 36 36 38 39 LCS_GDT P 34 P 34 4 7 24 2 4 5 7 8 9 11 13 14 16 17 19 24 24 30 34 36 36 38 39 LCS_GDT F 35 F 35 3 4 24 2 3 4 4 5 9 11 16 19 21 23 24 26 29 31 34 36 36 38 39 LCS_GDT W 36 W 36 5 7 24 3 4 5 7 8 10 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT I 37 I 37 5 7 24 3 5 5 6 7 10 14 17 19 21 22 24 27 29 32 34 36 36 38 39 LCS_GDT S 38 S 38 5 7 24 4 5 5 6 7 9 13 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT S 39 S 39 5 7 24 4 5 6 8 10 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT F 40 F 40 5 7 24 4 5 5 6 6 11 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT I 41 I 41 5 7 24 4 5 5 7 10 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT G 42 G 42 4 7 14 3 3 9 9 11 11 14 17 19 21 23 24 27 29 32 34 36 36 38 39 LCS_GDT R 43 R 43 4 6 14 3 3 4 4 6 9 11 12 13 16 18 22 26 28 31 33 34 36 38 39 LCS_GDT S 44 S 44 4 6 14 3 3 4 4 6 7 8 9 12 13 15 17 18 22 26 30 32 34 35 35 LCS_GDT K 45 K 45 4 6 14 1 3 4 4 6 7 8 9 12 13 13 13 16 17 18 20 21 22 26 28 LCS_AVERAGE LCS_A: 26.43 ( 12.65 18.23 48.40 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 7 9 10 11 12 14 17 19 21 23 24 27 29 32 34 36 36 38 39 GDT PERCENT_AT 13.64 15.91 20.45 22.73 25.00 27.27 31.82 38.64 43.18 47.73 52.27 54.55 61.36 65.91 72.73 77.27 81.82 81.82 86.36 88.64 GDT RMS_LOCAL 0.22 0.40 0.92 1.54 1.55 2.01 2.68 3.18 3.18 3.56 3.89 3.97 4.68 4.90 5.69 5.79 5.99 5.99 6.23 6.39 GDT RMS_ALL_AT 19.04 19.22 18.63 10.94 10.92 10.49 9.77 9.23 9.71 9.47 9.12 9.13 8.67 8.74 8.85 8.86 8.84 8.84 8.46 8.50 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 21.860 0 0.088 0.114 23.408 0.000 0.000 - LGA V 3 V 3 15.918 0 0.044 0.720 19.010 0.000 0.000 15.887 LGA Q 4 Q 4 9.293 0 0.467 0.400 13.297 0.000 0.000 9.949 LGA G 5 G 5 4.565 0 0.574 0.574 6.186 2.273 2.273 - LGA P 6 P 6 3.505 0 0.687 0.619 6.496 29.091 16.883 6.496 LGA W 7 W 7 2.532 0 0.296 1.135 12.195 34.545 10.260 10.976 LGA V 8 V 8 5.166 0 0.620 0.961 8.472 6.818 3.896 8.472 LGA G 9 G 9 6.975 0 0.390 0.390 6.975 0.455 0.455 - LGA S 10 S 10 3.125 0 0.043 0.112 5.157 24.545 18.182 5.157 LGA S 11 S 11 3.139 0 0.031 0.046 4.042 25.455 19.697 3.980 LGA Y 12 Y 12 3.342 0 0.046 1.301 15.324 18.182 6.212 15.324 LGA V 13 V 13 3.650 0 0.049 0.133 4.878 13.182 10.130 4.345 LGA A 14 A 14 2.512 0 0.126 0.125 4.218 25.455 28.000 - LGA E 15 E 15 3.960 0 0.036 0.835 5.893 7.727 16.970 3.556 LGA T 16 T 16 5.623 0 0.171 0.179 6.360 0.455 0.519 4.937 LGA G 17 G 17 3.944 0 0.124 0.124 4.328 29.545 29.545 - LGA Q 18 Q 18 2.861 0 0.582 0.594 6.473 23.182 13.535 3.995 LGA N 19 N 19 9.087 0 0.094 1.037 11.965 0.000 0.000 11.831 LGA W 20 W 20 7.122 0 0.656 0.435 17.704 0.455 0.130 17.704 LGA A 21 A 21 6.171 0 0.032 0.033 8.249 0.000 0.000 - LGA S 22 S 22 7.629 0 0.067 0.625 9.772 0.000 0.000 9.772 LGA L 23 L 23 4.816 0 0.027 0.194 10.034 0.455 0.227 10.034 LGA A 24 A 24 7.306 0 0.028 0.037 10.590 0.000 0.000 - LGA A 25 A 25 10.341 0 0.029 0.034 12.663 0.000 0.000 - LGA N 26 N 26 9.062 0 0.044 0.560 11.912 0.000 0.000 9.193 LGA E 27 E 27 12.567 0 0.031 0.619 16.406 0.000 0.000 11.346 LGA L 28 L 28 15.925 0 0.190 1.393 21.251 0.000 0.000 18.175 LGA R 29 R 29 15.686 0 0.450 1.561 21.702 0.000 0.000 21.694 LGA V 30 V 30 13.981 0 0.180 0.355 16.659 0.000 0.000 12.499 LGA T 31 T 31 12.320 0 0.659 0.543 16.796 0.000 0.000 16.216 LGA E 32 E 32 9.580 0 0.104 0.980 10.607 0.000 0.000 8.548 LGA R 33 R 33 10.430 0 0.038 1.321 17.121 0.000 0.000 16.463 LGA P 34 P 34 10.573 0 0.658 0.717 12.779 0.000 0.000 12.779 LGA F 35 F 35 8.240 0 0.681 1.037 12.694 0.000 0.000 12.694 LGA W 36 W 36 2.376 0 0.575 1.210 12.578 30.000 9.481 12.578 LGA I 37 I 37 2.947 0 0.105 1.301 6.325 22.727 18.409 2.809 LGA S 38 S 38 3.810 0 0.169 0.182 5.306 20.909 13.939 5.306 LGA S 39 S 39 2.955 0 0.145 0.693 5.982 27.727 20.303 5.982 LGA F 40 F 40 2.809 0 0.150 0.495 8.827 33.636 12.397 8.827 LGA I 41 I 41 2.869 0 0.639 1.601 9.421 36.818 18.409 9.421 LGA G 42 G 42 3.100 0 0.563 0.563 7.698 17.273 17.273 - LGA R 43 R 43 9.679 0 0.053 1.111 15.504 0.000 0.000 15.504 LGA S 44 S 44 14.618 0 0.315 0.756 18.955 0.000 0.000 14.323 LGA K 45 K 45 21.104 0 0.084 0.809 28.002 0.000 0.000 28.002 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.176 8.144 9.587 9.793 6.526 1.922 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 3.18 38.636 32.997 0.518 LGA_LOCAL RMSD: 3.179 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.232 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.176 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.912784 * X + -0.004712 * Y + 0.408415 * Z + -4.345038 Y_new = -0.109943 * X + 0.965861 * Y + -0.234573 * Z + 44.888767 Z_new = -0.393366 * X + -0.259017 * Y + -0.882141 * Z + 1.337211 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.021722 0.404290 -2.855996 [DEG: -173.1319 23.1641 -163.6365 ] ZXZ: 1.049450 2.651186 -2.153098 [DEG: 60.1291 151.9017 -123.3634 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS492_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 3.18 32.997 8.18 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS492_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 REFINED PARENT N/A ATOM 9 N ALA 2 13.461 44.541 -7.660 1.00 2.00 ATOM 10 CA ALA 2 12.603 43.478 -7.121 1.00 2.00 ATOM 11 C ALA 2 12.671 43.490 -5.578 1.00 2.00 ATOM 12 O ALA 2 13.761 43.575 -5.009 1.00 2.00 ATOM 13 CB ALA 2 13.043 42.137 -7.725 1.00 2.10 ATOM 14 N VAL 3 11.516 43.422 -4.901 1.00 1.20 ATOM 15 CA VAL 3 11.402 43.556 -3.430 1.00 1.20 ATOM 16 C VAL 3 10.324 42.623 -2.872 1.00 1.20 ATOM 17 O VAL 3 9.174 42.643 -3.302 1.00 1.20 ATOM 18 CB VAL 3 11.192 45.020 -2.975 1.00 1.50 ATOM 19 CG1 VAL 3 12.523 45.610 -2.508 1.00 1.50 ATOM 20 CG2 VAL 3 10.633 45.967 -4.048 1.00 1.50 ATOM 21 N GLN 4 10.705 41.802 -1.895 1.00 0.90 ATOM 22 CA GLN 4 9.956 40.632 -1.420 1.00 0.90 ATOM 23 C GLN 4 9.270 40.827 -0.052 1.00 0.90 ATOM 24 O GLN 4 9.435 40.022 0.861 1.00 0.90 ATOM 25 CB GLN 4 10.924 39.433 -1.468 1.00 1.90 ATOM 26 CG GLN 4 11.257 39.044 -2.924 1.00 1.90 ATOM 27 CD GLN 4 12.288 37.921 -3.059 1.00 1.90 ATOM 28 OE1 GLN 4 12.890 37.439 -2.109 1.00 1.90 ATOM 29 NE2 GLN 4 12.548 37.468 -4.268 1.00 1.90 ATOM 30 N GLY 5 8.479 41.897 0.097 1.00 0.90 ATOM 31 CA GLY 5 7.749 42.205 1.341 1.00 0.90 ATOM 32 C GLY 5 6.917 41.045 1.921 1.00 0.90 ATOM 33 O GLY 5 7.084 40.745 3.105 1.00 0.90 ATOM 34 N PRO 6 6.037 40.394 1.128 1.00 0.80 ATOM 35 CA PRO 6 5.267 39.214 1.548 1.00 0.80 ATOM 36 C PRO 6 6.167 38.048 2.010 1.00 0.80 ATOM 37 O PRO 6 7.322 37.955 1.595 1.00 0.80 ATOM 38 CB PRO 6 4.386 38.854 0.343 1.00 0.90 ATOM 39 CG PRO 6 4.236 40.189 -0.391 1.00 0.90 ATOM 40 CD PRO 6 5.606 40.822 -0.196 1.00 0.90 ATOM 41 N TRP 7 5.647 37.153 2.865 1.00 0.80 ATOM 42 CA TRP 7 6.431 36.135 3.592 1.00 0.80 ATOM 43 C TRP 7 7.498 35.390 2.760 1.00 0.80 ATOM 44 O TRP 7 7.197 34.844 1.698 1.00 0.80 ATOM 45 CB TRP 7 5.511 35.043 4.146 1.00 0.80 ATOM 46 CG TRP 7 4.349 35.380 5.025 1.00 0.80 ATOM 47 CD1 TRP 7 4.400 35.997 6.227 1.00 0.80 ATOM 48 CD2 TRP 7 2.963 34.955 4.854 1.00 0.80 ATOM 49 NE1 TRP 7 3.164 35.911 6.841 1.00 0.80 ATOM 50 CE2 TRP 7 2.254 35.241 6.056 1.00 0.80 ATOM 51 CE3 TRP 7 2.248 34.308 3.822 1.00 0.80 ATOM 52 CZ2 TRP 7 0.929 34.838 6.254 1.00 0.80 ATOM 53 CZ3 TRP 7 0.917 33.892 4.012 1.00 0.80 ATOM 54 CH2 TRP 7 0.266 34.132 5.235 1.00 0.80 ATOM 55 N VAL 8 8.724 35.272 3.289 1.00 1.00 ATOM 56 CA VAL 8 9.776 34.399 2.733 1.00 1.00 ATOM 57 C VAL 8 9.674 32.982 3.316 1.00 1.00 ATOM 58 O VAL 8 9.873 32.776 4.516 1.00 1.00 ATOM 59 CB VAL 8 11.185 35.021 2.875 1.00 1.20 ATOM 60 CG1 VAL 8 11.573 35.454 4.296 1.00 1.20 ATOM 61 CG2 VAL 8 12.273 34.070 2.356 1.00 1.20 ATOM 62 N GLY 9 9.371 32.001 2.457 1.00 1.40 ATOM 63 CA GLY 9 9.310 30.572 2.800 1.00 1.40 ATOM 64 C GLY 9 8.405 30.237 3.994 1.00 1.40 ATOM 65 O GLY 9 7.466 30.965 4.320 1.00 1.40 ATOM 66 N SER 10 8.717 29.140 4.688 1.00 1.60 ATOM 67 CA SER 10 8.073 28.757 5.958 1.00 1.60 ATOM 68 C SER 10 8.439 29.682 7.133 1.00 1.60 ATOM 69 O SER 10 7.713 29.711 8.126 1.00 1.60 ATOM 70 CB SER 10 8.429 27.302 6.294 1.00 2.00 ATOM 71 OG SER 10 9.836 27.122 6.413 1.00 2.00 ATOM 72 N SER 11 9.523 30.463 7.023 1.00 1.60 ATOM 73 CA SER 11 10.128 31.223 8.132 1.00 1.60 ATOM 74 C SER 11 9.171 32.220 8.808 1.00 1.60 ATOM 75 O SER 11 9.136 32.294 10.039 1.00 1.60 ATOM 76 CB SER 11 11.398 31.924 7.634 1.00 1.90 ATOM 77 OG SER 11 12.168 32.405 8.726 1.00 1.90 ATOM 78 N TYR 12 8.337 32.923 8.024 1.00 1.40 ATOM 79 CA TYR 12 7.227 33.738 8.548 1.00 1.40 ATOM 80 C TYR 12 5.832 33.114 8.329 1.00 1.40 ATOM 81 O TYR 12 4.922 33.398 9.106 1.00 1.40 ATOM 82 CB TYR 12 7.288 35.163 7.980 1.00 1.70 ATOM 83 CG TYR 12 8.552 35.965 8.251 1.00 1.70 ATOM 84 CD1 TYR 12 9.185 36.650 7.194 1.00 1.70 ATOM 85 CD2 TYR 12 9.057 36.092 9.562 1.00 1.70 ATOM 86 CE1 TYR 12 10.333 37.431 7.433 1.00 1.70 ATOM 87 CE2 TYR 12 10.201 36.877 9.807 1.00 1.70 ATOM 88 CZ TYR 12 10.847 37.544 8.744 1.00 1.70 ATOM 89 OH TYR 12 11.955 38.299 8.989 1.00 1.70 ATOM 90 N VAL 13 5.642 32.229 7.334 1.00 1.10 ATOM 91 CA VAL 13 4.351 31.531 7.115 1.00 1.10 ATOM 92 C VAL 13 3.948 30.677 8.326 1.00 1.10 ATOM 93 O VAL 13 2.774 30.649 8.683 1.00 1.10 ATOM 94 CB VAL 13 4.387 30.670 5.833 1.00 1.20 ATOM 95 CG1 VAL 13 3.224 29.678 5.696 1.00 1.20 ATOM 96 CG2 VAL 13 4.350 31.554 4.585 1.00 1.20 ATOM 97 N ALA 14 4.897 30.022 9.007 1.00 1.20 ATOM 98 CA ALA 14 4.607 29.153 10.156 1.00 1.20 ATOM 99 C ALA 14 3.943 29.879 11.349 1.00 1.20 ATOM 100 O ALA 14 3.336 29.235 12.209 1.00 1.20 ATOM 101 CB ALA 14 5.911 28.471 10.584 1.00 1.30 ATOM 102 N GLU 15 4.006 31.213 11.395 1.00 1.30 ATOM 103 CA GLU 15 3.329 32.039 12.401 1.00 1.30 ATOM 104 C GLU 15 1.794 31.977 12.276 1.00 1.30 ATOM 105 O GLU 15 1.094 32.088 13.287 1.00 1.30 ATOM 106 CB GLU 15 3.831 33.490 12.295 1.00 2.30 ATOM 107 CG GLU 15 5.364 33.635 12.389 1.00 2.30 ATOM 108 CD GLU 15 5.953 33.245 13.761 1.00 2.30 ATOM 109 OE1 GLU 15 5.212 33.178 14.770 1.00 2.30 ATOM 110 OE2 GLU 15 7.184 33.007 13.839 1.00 2.30 ATOM 111 N THR 16 1.248 31.732 11.073 1.00 1.20 ATOM 112 CA THR 16 -0.199 31.522 10.882 1.00 1.20 ATOM 113 C THR 16 -0.670 30.224 11.541 1.00 1.20 ATOM 114 O THR 16 -1.667 30.229 12.259 1.00 1.20 ATOM 115 CB THR 16 -0.627 31.512 9.395 1.00 1.40 ATOM 116 OG1 THR 16 -0.240 30.333 8.723 1.00 1.40 ATOM 117 CG2 THR 16 -0.084 32.691 8.599 1.00 1.40 ATOM 118 N GLY 17 0.067 29.125 11.353 1.00 1.10 ATOM 119 CA GLY 17 -0.361 27.769 11.710 1.00 1.10 ATOM 120 C GLY 17 -0.544 27.487 13.206 1.00 1.10 ATOM 121 O GLY 17 -1.235 26.527 13.551 1.00 1.10 ATOM 122 N GLN 18 0.046 28.304 14.089 1.00 1.30 ATOM 123 CA GLN 18 -0.042 28.138 15.550 1.00 1.30 ATOM 124 C GLN 18 -0.220 29.465 16.309 1.00 1.30 ATOM 125 O GLN 18 -1.181 29.615 17.066 1.00 1.30 ATOM 126 CB GLN 18 1.199 27.389 16.087 1.00 2.50 ATOM 127 CG GLN 18 1.489 26.003 15.475 1.00 2.50 ATOM 128 CD GLN 18 0.466 24.910 15.806 1.00 2.50 ATOM 129 OE1 GLN 18 -0.488 25.079 16.557 1.00 2.50 ATOM 130 NE2 GLN 18 0.650 23.717 15.275 1.00 2.50 ATOM 131 N ASN 19 0.684 30.436 16.115 1.00 1.20 ATOM 132 CA ASN 19 0.741 31.644 16.951 1.00 1.20 ATOM 133 C ASN 19 -0.444 32.598 16.724 1.00 1.20 ATOM 134 O ASN 19 -1.097 32.997 17.692 1.00 1.20 ATOM 135 CB ASN 19 2.115 32.323 16.784 1.00 1.90 ATOM 136 CG ASN 19 3.241 31.524 17.434 1.00 1.90 ATOM 137 OD1 ASN 19 3.068 30.847 18.439 1.00 1.90 ATOM 138 ND2 ASN 19 4.436 31.560 16.895 1.00 1.90 ATOM 139 N TRP 20 -0.780 32.918 15.470 1.00 0.80 ATOM 140 CA TRP 20 -1.961 33.742 15.155 1.00 0.80 ATOM 141 C TRP 20 -3.279 32.944 15.122 1.00 0.80 ATOM 142 O TRP 20 -4.351 33.515 15.331 1.00 0.80 ATOM 143 CB TRP 20 -1.707 34.536 13.868 1.00 0.90 ATOM 144 CG TRP 20 -0.406 35.289 13.807 1.00 0.90 ATOM 145 CD1 TRP 20 0.464 35.250 12.774 1.00 0.90 ATOM 146 CD2 TRP 20 0.194 36.202 14.785 1.00 0.90 ATOM 147 NE1 TRP 20 1.508 36.126 12.999 1.00 0.90 ATOM 148 CE2 TRP 20 1.407 36.722 14.235 1.00 0.90 ATOM 149 CE3 TRP 20 -0.137 36.618 16.094 1.00 0.90 ATOM 150 CZ2 TRP 20 2.224 37.628 14.928 1.00 0.90 ATOM 151 CZ3 TRP 20 0.688 37.508 16.806 1.00 0.90 ATOM 152 CH2 TRP 20 1.861 38.024 16.226 1.00 0.90 ATOM 153 N ALA 21 -3.222 31.619 14.929 1.00 0.90 ATOM 154 CA ALA 21 -4.398 30.740 14.947 1.00 0.90 ATOM 155 C ALA 21 -5.161 30.760 16.286 1.00 0.90 ATOM 156 O ALA 21 -6.392 30.686 16.287 1.00 0.90 ATOM 157 CB ALA 21 -3.954 29.314 14.590 1.00 1.00 ATOM 158 N SER 22 -4.454 30.908 17.414 1.00 1.30 ATOM 159 CA SER 22 -5.061 30.922 18.755 1.00 1.30 ATOM 160 C SER 22 -6.078 32.062 18.925 1.00 1.30 ATOM 161 O SER 22 -7.231 31.822 19.296 1.00 1.30 ATOM 162 CB SER 22 -3.959 30.997 19.820 1.00 1.60 ATOM 163 OG SER 22 -4.519 30.931 21.122 1.00 1.60 ATOM 164 N LEU 23 -5.699 33.298 18.577 1.00 1.10 ATOM 165 CA LEU 23 -6.590 34.466 18.646 1.00 1.10 ATOM 166 C LEU 23 -7.655 34.463 17.540 1.00 1.10 ATOM 167 O LEU 23 -8.801 34.827 17.807 1.00 1.10 ATOM 168 CB LEU 23 -5.750 35.753 18.591 1.00 1.40 ATOM 169 CG LEU 23 -4.930 36.036 19.863 1.00 1.40 ATOM 170 CD1 LEU 23 -3.930 37.161 19.593 1.00 1.40 ATOM 171 CD2 LEU 23 -5.820 36.462 21.034 1.00 1.40 ATOM 172 N ALA 24 -7.322 34.005 16.328 1.00 0.90 ATOM 173 CA ALA 24 -8.283 33.912 15.225 1.00 0.90 ATOM 174 C ALA 24 -9.493 33.017 15.570 1.00 0.90 ATOM 175 O ALA 24 -10.634 33.387 15.291 1.00 0.90 ATOM 176 CB ALA 24 -7.550 33.396 13.983 1.00 1.00 ATOM 177 N ALA 25 -9.253 31.874 16.224 1.00 1.40 ATOM 178 CA ALA 25 -10.309 30.969 16.678 1.00 1.40 ATOM 179 C ALA 25 -11.107 31.520 17.879 1.00 1.40 ATOM 180 O ALA 25 -12.337 31.429 17.897 1.00 1.40 ATOM 181 CB ALA 25 -9.666 29.619 17.019 1.00 1.50 ATOM 182 N ASN 26 -10.421 32.075 18.889 1.00 1.60 ATOM 183 CA ASN 26 -11.045 32.465 20.161 1.00 1.60 ATOM 184 C ASN 26 -11.766 33.827 20.130 1.00 1.60 ATOM 185 O ASN 26 -12.795 33.973 20.793 1.00 1.60 ATOM 186 CB ASN 26 -9.991 32.406 21.282 1.00 2.10 ATOM 187 CG ASN 26 -9.720 30.977 21.727 1.00 2.10 ATOM 188 OD1 ASN 26 -10.479 30.387 22.486 1.00 2.10 ATOM 189 ND2 ASN 26 -8.649 30.365 21.277 1.00 2.10 ATOM 190 N GLU 27 -11.258 34.823 19.391 1.00 1.60 ATOM 191 CA GLU 27 -11.828 36.188 19.387 1.00 1.60 ATOM 192 C GLU 27 -12.823 36.423 18.230 1.00 1.60 ATOM 193 O GLU 27 -13.764 37.201 18.388 1.00 1.60 ATOM 194 CB GLU 27 -10.712 37.240 19.468 1.00 2.60 ATOM 195 CG GLU 27 -9.751 36.958 20.643 1.00 2.60 ATOM 196 CD GLU 27 -9.237 38.230 21.347 1.00 2.60 ATOM 197 OE1 GLU 27 -8.947 39.249 20.674 1.00 2.60 ATOM 198 OE2 GLU 27 -9.109 38.214 22.597 1.00 2.60 ATOM 199 N LEU 28 -12.645 35.709 17.107 1.00 1.80 ATOM 200 CA LEU 28 -13.577 35.486 15.980 1.00 1.80 ATOM 201 C LEU 28 -14.162 36.679 15.174 1.00 1.80 ATOM 202 O LEU 28 -14.481 36.502 13.997 1.00 1.80 ATOM 203 CB LEU 28 -14.677 34.565 16.552 1.00 2.10 ATOM 204 CG LEU 28 -15.660 33.918 15.563 1.00 2.10 ATOM 205 CD1 LEU 28 -14.958 32.974 14.587 1.00 2.10 ATOM 206 CD2 LEU 28 -16.678 33.101 16.360 1.00 2.10 ATOM 207 N ARG 29 -14.322 37.873 15.757 1.00 1.80 ATOM 208 CA ARG 29 -14.913 39.076 15.129 1.00 1.80 ATOM 209 C ARG 29 -14.102 39.540 13.908 1.00 1.80 ATOM 210 O ARG 29 -12.923 39.819 14.065 1.00 1.80 ATOM 211 CB ARG 29 -15.002 40.172 16.216 1.00 3.70 ATOM 212 CG ARG 29 -15.311 41.600 15.724 1.00 3.70 ATOM 213 CD ARG 29 -15.568 42.517 16.932 1.00 3.70 ATOM 214 NE ARG 29 -15.373 43.949 16.613 1.00 3.70 ATOM 215 CZ ARG 29 -15.293 44.935 17.493 1.00 3.70 ATOM 216 NH1 ARG 29 -14.989 46.143 17.111 1.00 3.70 ATOM 217 NH2 ARG 29 -15.502 44.747 18.766 1.00 3.70 ATOM 218 N VAL 30 -14.764 39.668 12.745 1.00 1.10 ATOM 219 CA VAL 30 -14.300 40.284 11.471 1.00 1.10 ATOM 220 C VAL 30 -12.987 39.726 10.864 1.00 1.10 ATOM 221 O VAL 30 -12.137 39.114 11.508 1.00 1.10 ATOM 222 CB VAL 30 -14.427 41.831 11.529 1.00 1.60 ATOM 223 CG1 VAL 30 -13.733 42.613 10.404 1.00 1.60 ATOM 224 CG2 VAL 30 -15.920 42.197 11.452 1.00 1.60 ATOM 225 N THR 31 -12.861 39.870 9.544 1.00 0.80 ATOM 226 CA THR 31 -11.869 39.205 8.684 1.00 0.80 ATOM 227 C THR 31 -10.562 39.950 8.429 1.00 0.80 ATOM 228 O THR 31 -10.427 41.145 8.674 1.00 0.80 ATOM 229 CB THR 31 -12.548 38.839 7.362 1.00 1.20 ATOM 230 OG1 THR 31 -13.171 39.976 6.817 1.00 1.20 ATOM 231 CG2 THR 31 -13.599 37.746 7.580 1.00 1.20 ATOM 232 N GLU 32 -9.571 39.220 7.910 1.00 0.70 ATOM 233 CA GLU 32 -8.247 39.731 7.536 1.00 0.70 ATOM 234 C GLU 32 -7.830 39.244 6.144 1.00 0.70 ATOM 235 O GLU 32 -8.446 38.344 5.570 1.00 0.70 ATOM 236 CB GLU 32 -7.198 39.312 8.584 1.00 1.70 ATOM 237 CG GLU 32 -7.527 39.851 9.981 1.00 1.70 ATOM 238 CD GLU 32 -6.270 40.141 10.823 1.00 1.70 ATOM 239 OE1 GLU 32 -5.256 39.417 10.674 1.00 1.70 ATOM 240 OE2 GLU 32 -6.337 41.083 11.645 1.00 1.70 ATOM 241 N ARG 33 -6.761 39.833 5.593 1.00 0.70 ATOM 242 CA ARG 33 -6.090 39.354 4.371 1.00 0.70 ATOM 243 C ARG 33 -4.595 39.140 4.713 1.00 0.70 ATOM 244 O ARG 33 -4.008 40.007 5.360 1.00 0.70 ATOM 245 CB ARG 33 -6.415 40.303 3.188 1.00 1.20 ATOM 246 CG ARG 33 -7.937 40.390 2.932 1.00 1.20 ATOM 247 CD ARG 33 -8.411 41.397 1.871 1.00 1.20 ATOM 248 NE ARG 33 -7.891 41.182 0.496 1.00 1.20 ATOM 249 CZ ARG 33 -8.238 40.259 -0.379 1.00 1.20 ATOM 250 NH1 ARG 33 -7.864 40.357 -1.615 1.00 1.20 ATOM 251 NH2 ARG 33 -8.976 39.246 -0.064 1.00 1.20 ATOM 252 N PRO 34 -3.953 38.031 4.283 1.00 0.70 ATOM 253 CA PRO 34 -2.633 37.583 4.775 1.00 0.70 ATOM 254 C PRO 34 -1.442 38.547 4.903 1.00 0.70 ATOM 255 O PRO 34 -0.600 38.300 5.758 1.00 0.70 ATOM 256 CB PRO 34 -2.282 36.385 3.894 1.00 0.80 ATOM 257 CG PRO 34 -3.642 35.717 3.767 1.00 0.80 ATOM 258 CD PRO 34 -4.564 36.913 3.554 1.00 0.80 ATOM 259 N PHE 35 -1.345 39.659 4.160 1.00 0.70 ATOM 260 CA PHE 35 -0.210 40.594 4.330 1.00 0.70 ATOM 261 C PHE 35 -0.254 41.378 5.664 1.00 0.70 ATOM 262 O PHE 35 0.775 41.875 6.106 1.00 0.70 ATOM 263 CB PHE 35 -0.017 41.446 3.068 1.00 1.20 ATOM 264 CG PHE 35 1.213 42.335 3.037 1.00 1.20 ATOM 265 CD1 PHE 35 2.412 41.851 2.488 1.00 1.20 ATOM 266 CD2 PHE 35 1.160 43.653 3.526 1.00 1.20 ATOM 267 CE1 PHE 35 3.547 42.679 2.426 1.00 1.20 ATOM 268 CE2 PHE 35 2.298 44.479 3.456 1.00 1.20 ATOM 269 CZ PHE 35 3.493 43.993 2.909 1.00 1.20 ATOM 270 N TRP 36 -1.393 41.422 6.380 1.00 0.70 ATOM 271 CA TRP 36 -1.422 41.871 7.798 1.00 0.70 ATOM 272 C TRP 36 -0.461 40.981 8.606 1.00 0.70 ATOM 273 O TRP 36 0.431 41.419 9.331 1.00 0.70 ATOM 274 CB TRP 36 -2.865 41.724 8.346 1.00 0.70 ATOM 275 CG TRP 36 -3.155 42.181 9.759 1.00 0.70 ATOM 276 CD1 TRP 36 -4.016 43.177 10.060 1.00 0.70 ATOM 277 CD2 TRP 36 -2.673 41.702 11.069 1.00 0.70 ATOM 278 NE1 TRP 36 -4.028 43.426 11.416 1.00 0.70 ATOM 279 CE2 TRP 36 -3.181 42.574 12.083 1.00 0.70 ATOM 280 CE3 TRP 36 -1.828 40.662 11.526 1.00 0.70 ATOM 281 CZ2 TRP 36 -2.803 42.479 13.429 1.00 0.70 ATOM 282 CZ3 TRP 36 -1.395 40.589 12.864 1.00 0.70 ATOM 283 CH2 TRP 36 -1.861 41.516 13.812 1.00 0.70 ATOM 284 N ILE 37 -0.617 39.683 8.354 1.00 0.70 ATOM 285 CA ILE 37 0.014 38.536 9.000 1.00 0.70 ATOM 286 C ILE 37 1.479 38.346 8.541 1.00 0.70 ATOM 287 O ILE 37 2.185 37.481 9.059 1.00 0.70 ATOM 288 CB ILE 37 -0.920 37.299 8.826 1.00 0.80 ATOM 289 CG1 ILE 37 -2.436 37.661 8.794 1.00 0.80 ATOM 290 CG2 ILE 37 -0.659 36.307 9.965 1.00 0.80 ATOM 291 CD1 ILE 37 -3.420 36.491 8.689 1.00 0.80 ATOM 292 N SER 38 1.964 39.181 7.608 1.00 0.70 ATOM 293 CA SER 38 3.379 39.314 7.229 1.00 0.70 ATOM 294 C SER 38 3.967 40.655 7.698 1.00 0.70 ATOM 295 O SER 38 4.997 40.655 8.370 1.00 0.70 ATOM 296 CB SER 38 3.569 39.083 5.724 1.00 0.80 ATOM 297 OG SER 38 3.068 40.152 4.952 1.00 0.80 ATOM 298 N SER 39 3.298 41.794 7.456 1.00 0.80 ATOM 299 CA SER 39 3.785 43.140 7.828 1.00 0.80 ATOM 300 C SER 39 4.160 43.278 9.302 1.00 0.80 ATOM 301 O SER 39 5.151 43.930 9.632 1.00 0.80 ATOM 302 CB SER 39 2.729 44.210 7.526 1.00 1.10 ATOM 303 OG SER 39 2.998 44.768 6.260 1.00 1.10 ATOM 304 N PHE 40 3.373 42.675 10.197 1.00 1.20 ATOM 305 CA PHE 40 3.512 42.874 11.645 1.00 1.20 ATOM 306 C PHE 40 4.362 41.808 12.348 1.00 1.20 ATOM 307 O PHE 40 4.561 41.881 13.561 1.00 1.20 ATOM 308 CB PHE 40 2.125 43.113 12.248 1.00 1.20 ATOM 309 CG PHE 40 1.314 44.117 11.449 1.00 1.20 ATOM 310 CD1 PHE 40 1.904 45.301 10.970 1.00 1.20 ATOM 311 CD2 PHE 40 -0.013 43.831 11.110 1.00 1.20 ATOM 312 CE1 PHE 40 1.184 46.189 10.160 1.00 1.20 ATOM 313 CE2 PHE 40 -0.739 44.709 10.293 1.00 1.20 ATOM 314 CZ PHE 40 -0.141 45.888 9.831 1.00 1.20 ATOM 315 N ILE 41 4.931 40.875 11.572 1.00 1.20 ATOM 316 CA ILE 41 5.943 39.913 12.031 1.00 1.20 ATOM 317 C ILE 41 7.282 40.033 11.271 1.00 1.20 ATOM 318 O ILE 41 8.329 39.695 11.827 1.00 1.20 ATOM 319 CB ILE 41 5.316 38.502 12.072 1.00 1.30 ATOM 320 CG1 ILE 41 6.073 37.495 12.961 1.00 1.30 ATOM 321 CG2 ILE 41 5.145 37.901 10.667 1.00 1.30 ATOM 322 CD1 ILE 41 6.388 37.993 14.378 1.00 1.30 ATOM 323 N GLY 42 7.277 40.591 10.051 1.00 1.10 ATOM 324 CA GLY 42 8.476 41.000 9.308 1.00 1.10 ATOM 325 C GLY 42 8.307 41.053 7.780 1.00 1.10 ATOM 326 O GLY 42 8.079 40.024 7.139 1.00 1.10 ATOM 327 N ARG 43 8.464 42.249 7.185 1.00 1.00 ATOM 328 CA ARG 43 8.598 42.440 5.722 1.00 1.00 ATOM 329 C ARG 43 10.039 42.109 5.298 1.00 1.00 ATOM 330 O ARG 43 10.972 42.464 6.022 1.00 1.00 ATOM 331 CB ARG 43 8.281 43.896 5.310 1.00 2.40 ATOM 332 CG ARG 43 6.876 44.392 5.686 1.00 2.40 ATOM 333 CD ARG 43 6.688 45.870 5.301 1.00 2.40 ATOM 334 NE ARG 43 5.331 46.336 5.648 1.00 2.40 ATOM 335 CZ ARG 43 4.806 47.532 5.447 1.00 2.40 ATOM 336 NH1 ARG 43 3.572 47.747 5.800 1.00 2.40 ATOM 337 NH2 ARG 43 5.446 48.517 4.892 1.00 2.40 ATOM 338 N SER 44 10.250 41.516 4.117 1.00 1.10 ATOM 339 CA SER 44 11.599 41.346 3.534 1.00 1.10 ATOM 340 C SER 44 11.867 42.348 2.394 1.00 1.10 ATOM 341 O SER 44 11.728 42.040 1.209 1.00 1.10 ATOM 342 CB SER 44 11.872 39.881 3.166 1.00 1.30 ATOM 343 OG SER 44 13.253 39.706 2.884 1.00 1.30 ATOM 344 N LYS 45 12.270 43.568 2.790 1.00 1.10 ATOM 345 CA LYS 45 12.602 44.747 1.951 1.00 1.10 ATOM 346 C LYS 45 11.426 45.411 1.207 1.00 1.10 ATOM 347 O LYS 45 10.439 44.780 0.834 1.00 1.10 ATOM 348 CB LYS 45 13.767 44.435 0.984 1.00 2.20 ATOM 349 CG LYS 45 15.013 43.818 1.640 1.00 2.20 ATOM 350 CD LYS 45 16.088 43.552 0.576 1.00 2.20 ATOM 351 CE LYS 45 17.302 42.849 1.196 1.00 2.20 ATOM 352 NZ LYS 45 18.361 42.591 0.182 1.00 2.20 TER END