####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS492_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 18 - 37 4.98 17.08 LCS_AVERAGE: 41.94 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.91 14.63 LCS_AVERAGE: 17.41 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.78 14.48 LCS_AVERAGE: 13.27 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 15 0 4 5 5 5 7 10 11 13 15 15 16 18 18 20 24 25 27 28 28 LCS_GDT V 3 V 3 4 6 15 3 4 5 5 5 8 10 11 13 15 15 17 19 21 23 24 27 27 28 28 LCS_GDT Q 4 Q 4 4 6 15 3 4 5 5 5 8 10 11 13 15 15 17 19 21 23 24 27 27 28 28 LCS_GDT G 5 G 5 4 6 19 3 4 5 5 5 7 8 11 13 15 16 18 20 21 23 24 27 27 28 29 LCS_GDT P 6 P 6 4 6 19 0 3 5 5 5 7 8 10 11 15 16 19 20 21 23 24 27 27 30 31 LCS_GDT W 7 W 7 3 6 19 3 3 4 4 7 7 7 10 12 15 18 20 23 25 28 30 31 33 34 34 LCS_GDT V 8 V 8 3 10 19 3 3 4 5 6 9 10 11 12 15 18 21 25 25 28 30 31 33 34 34 LCS_GDT G 9 G 9 9 10 19 3 9 9 10 10 11 11 11 11 13 14 19 22 25 28 30 31 33 34 34 LCS_GDT S 10 S 10 9 10 19 3 3 9 10 10 11 11 13 15 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT S 11 S 11 9 10 19 7 9 9 10 10 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT Y 12 Y 12 9 10 19 7 9 9 10 10 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT V 13 V 13 9 10 19 7 9 9 10 10 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT A 14 A 14 9 10 19 7 9 9 10 10 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT E 15 E 15 9 10 19 7 9 9 10 10 11 11 12 15 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT T 16 T 16 9 10 19 7 9 9 10 10 11 11 12 13 15 16 19 23 25 28 30 31 33 34 34 LCS_GDT G 17 G 17 9 10 19 7 9 9 10 10 11 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT Q 18 Q 18 3 4 20 3 4 4 7 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT N 19 N 19 3 4 20 3 3 5 5 7 9 10 11 13 15 17 21 25 25 28 30 31 32 34 34 LCS_GDT W 20 W 20 8 9 20 6 8 8 9 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT A 21 A 21 8 9 20 6 8 8 9 9 9 11 12 15 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT S 22 S 22 8 9 20 6 8 8 9 9 9 10 11 13 16 17 20 25 25 28 30 31 33 34 34 LCS_GDT L 23 L 23 8 9 20 6 8 8 9 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT A 24 A 24 8 9 20 6 8 8 9 9 9 10 11 13 15 18 20 22 25 28 30 31 33 34 34 LCS_GDT A 25 A 25 8 9 20 6 8 8 9 9 9 10 11 13 15 16 19 20 21 23 25 30 33 34 34 LCS_GDT N 26 N 26 8 9 20 5 8 8 9 9 9 10 11 13 15 18 20 22 25 28 29 31 33 34 34 LCS_GDT E 27 E 27 8 9 20 5 8 8 9 9 9 10 11 13 15 15 17 21 24 27 27 30 33 34 34 LCS_GDT L 28 L 28 3 9 20 3 4 5 9 9 9 10 11 12 13 15 17 19 21 23 24 27 27 30 32 LCS_GDT R 29 R 29 4 7 20 3 4 5 6 7 8 9 11 12 14 16 19 20 21 23 25 27 30 31 32 LCS_GDT V 30 V 30 4 7 20 3 4 5 6 7 8 9 10 12 13 17 19 21 24 27 27 30 33 34 34 LCS_GDT T 31 T 31 4 7 20 3 4 5 6 7 8 9 12 14 15 18 20 22 25 28 30 31 33 34 34 LCS_GDT E 32 E 32 4 7 20 3 5 5 6 7 10 11 13 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT R 33 R 33 4 7 20 3 4 4 5 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT P 34 P 34 4 7 20 2 4 4 5 6 9 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT F 35 F 35 3 6 20 3 3 4 4 6 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT W 36 W 36 5 7 20 4 4 5 6 6 10 10 12 14 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT I 37 I 37 5 7 20 4 4 5 7 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT S 38 S 38 5 7 15 4 4 5 7 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT S 39 S 39 5 7 15 4 4 5 7 9 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT F 40 F 40 5 7 15 3 4 5 7 8 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT I 41 I 41 5 7 15 4 5 5 7 8 11 11 13 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT G 42 G 42 5 7 15 4 9 9 10 10 11 11 13 16 17 19 21 25 25 28 30 31 33 34 34 LCS_GDT R 43 R 43 5 5 15 4 4 5 5 5 6 7 9 13 13 15 18 22 24 26 27 29 31 31 33 LCS_GDT S 44 S 44 5 5 15 4 4 5 5 5 5 7 8 9 12 13 14 15 16 17 18 20 24 28 29 LCS_GDT K 45 K 45 5 5 15 0 3 5 5 5 5 7 8 9 12 13 14 15 16 17 18 20 20 21 23 LCS_AVERAGE LCS_A: 24.21 ( 13.27 17.41 41.94 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 9 10 10 12 15 15 16 17 19 21 25 25 28 30 31 33 34 34 GDT PERCENT_AT 15.91 20.45 20.45 22.73 22.73 27.27 34.09 34.09 36.36 38.64 43.18 47.73 56.82 56.82 63.64 68.18 70.45 75.00 77.27 77.27 GDT RMS_LOCAL 0.32 0.56 0.56 0.84 0.84 2.38 2.75 2.75 3.08 3.12 3.50 3.97 4.54 4.54 4.97 5.36 5.52 6.11 6.21 6.21 GDT RMS_ALL_AT 14.58 14.60 14.60 14.56 14.56 11.48 11.59 11.59 11.40 11.55 11.65 11.11 11.21 11.21 11.08 10.86 10.83 10.74 10.78 10.78 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 26.316 0 0.036 0.042 27.846 0.000 0.000 - LGA V 3 V 3 22.094 0 0.066 0.117 23.209 0.000 0.000 19.615 LGA Q 4 Q 4 22.236 0 0.064 0.750 26.092 0.000 0.000 25.553 LGA G 5 G 5 20.067 0 0.074 0.074 20.937 0.000 0.000 - LGA P 6 P 6 16.729 0 0.671 0.611 18.373 0.000 0.000 17.749 LGA W 7 W 7 9.652 0 0.340 1.188 12.210 0.000 0.000 11.606 LGA V 8 V 8 7.876 0 0.096 0.191 9.281 0.000 0.000 7.757 LGA G 9 G 9 7.508 0 0.424 0.424 7.508 0.000 0.000 - LGA S 10 S 10 5.949 0 0.648 0.832 7.841 2.727 1.818 7.841 LGA S 11 S 11 2.316 0 0.092 0.735 3.767 49.091 47.576 1.829 LGA Y 12 Y 12 2.793 0 0.064 1.319 10.246 30.909 10.455 10.246 LGA V 13 V 13 2.654 0 0.035 0.239 5.600 50.455 31.169 4.256 LGA A 14 A 14 2.637 0 0.028 0.040 4.884 30.455 25.455 - LGA E 15 E 15 5.232 0 0.058 1.534 7.610 2.727 1.414 6.597 LGA T 16 T 16 6.789 0 0.155 1.066 9.021 0.000 0.000 6.405 LGA G 17 G 17 3.725 0 0.084 0.084 4.459 36.818 36.818 - LGA Q 18 Q 18 2.341 0 0.573 0.648 6.431 37.273 17.172 5.576 LGA N 19 N 19 6.944 0 0.142 1.022 11.271 0.000 0.000 10.943 LGA W 20 W 20 3.226 0 0.636 0.492 11.257 17.273 6.234 10.638 LGA A 21 A 21 7.325 0 0.063 0.070 9.683 0.000 0.000 - LGA S 22 S 22 8.363 0 0.047 0.623 9.158 0.000 0.000 9.076 LGA L 23 L 23 2.965 0 0.036 0.214 7.061 9.545 14.091 5.613 LGA A 24 A 24 8.955 0 0.046 0.052 12.957 0.000 0.000 - LGA A 25 A 25 13.207 0 0.072 0.069 15.173 0.000 0.000 - LGA N 26 N 26 10.512 0 0.061 0.926 13.650 0.000 0.000 9.046 LGA E 27 E 27 14.247 0 0.594 1.110 16.218 0.000 0.000 15.315 LGA L 28 L 28 18.722 0 0.172 0.264 21.228 0.000 0.000 21.228 LGA R 29 R 29 19.500 0 0.232 1.333 27.391 0.000 0.000 27.391 LGA V 30 V 30 14.692 0 0.113 0.180 16.390 0.000 0.000 12.437 LGA T 31 T 31 11.605 0 0.665 1.121 15.950 0.000 0.000 14.840 LGA E 32 E 32 7.128 0 0.080 1.014 10.790 0.000 0.000 10.372 LGA R 33 R 33 2.175 0 0.176 1.513 10.039 16.818 9.587 10.039 LGA P 34 P 34 3.250 0 0.609 0.617 4.068 19.545 19.221 3.382 LGA F 35 F 35 2.917 0 0.665 1.242 12.134 16.364 6.942 12.134 LGA W 36 W 36 5.319 0 0.579 0.426 16.799 12.273 3.506 16.799 LGA I 37 I 37 2.206 0 0.065 0.336 4.923 33.182 27.727 1.600 LGA S 38 S 38 3.136 0 0.028 0.624 4.157 31.364 23.636 3.706 LGA S 39 S 39 1.372 0 0.234 0.551 3.489 50.000 42.727 3.489 LGA F 40 F 40 2.673 0 0.108 1.063 5.261 20.909 33.058 3.016 LGA I 41 I 41 6.775 0 0.357 0.718 9.771 0.000 0.000 7.856 LGA G 42 G 42 8.138 0 0.286 0.286 10.201 0.000 0.000 - LGA R 43 R 43 12.989 0 0.082 1.045 16.992 0.000 0.000 16.992 LGA S 44 S 44 19.313 0 0.645 0.731 22.706 0.000 0.000 19.370 LGA K 45 K 45 23.782 0 0.435 0.718 29.465 0.000 0.000 29.465 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.936 9.812 11.253 10.630 8.150 4.935 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.75 36.364 30.578 0.527 LGA_LOCAL RMSD: 2.748 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.591 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.936 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.148035 * X + 0.240389 * Y + -0.959322 * Z + -16.027802 Y_new = -0.969383 * X + -0.156886 * Y + -0.188900 * Z + 40.139484 Z_new = -0.195914 * X + 0.957914 * Y + 0.209804 * Z + 0.899786 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.419256 0.197189 1.355179 [DEG: -81.3174 11.2981 77.6460 ] ZXZ: -1.376373 1.359421 -0.201739 [DEG: -78.8604 77.8891 -11.5588 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS492_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS492_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.75 30.578 9.94 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS492_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 REFINED PARENT N/A ATOM 9 N ALA 2 -9.654 19.203 5.384 1.00 7.60 ATOM 10 CA ALA 2 -8.314 19.494 5.920 1.00 7.60 ATOM 11 C ALA 2 -7.243 19.266 4.830 1.00 7.60 ATOM 12 O ALA 2 -7.400 18.389 3.974 1.00 7.60 ATOM 13 CB ALA 2 -8.091 18.653 7.183 1.00 7.70 ATOM 14 N VAL 3 -6.163 20.058 4.848 1.00 7.80 ATOM 15 CA VAL 3 -5.177 20.152 3.746 1.00 7.80 ATOM 16 C VAL 3 -3.742 19.835 4.203 1.00 7.80 ATOM 17 O VAL 3 -3.390 20.060 5.361 1.00 7.80 ATOM 18 CB VAL 3 -5.293 21.546 3.078 1.00 8.00 ATOM 19 CG1 VAL 3 -4.337 21.724 1.894 1.00 8.00 ATOM 20 CG2 VAL 3 -6.714 21.802 2.553 1.00 8.00 ATOM 21 N GLN 4 -2.904 19.337 3.283 1.00 9.00 ATOM 22 CA GLN 4 -1.485 19.000 3.492 1.00 9.00 ATOM 23 C GLN 4 -0.644 19.314 2.233 1.00 9.00 ATOM 24 O GLN 4 -1.075 19.022 1.114 1.00 9.00 ATOM 25 CB GLN 4 -1.405 17.514 3.897 1.00 9.90 ATOM 26 CG GLN 4 0.019 17.020 4.208 1.00 9.90 ATOM 27 CD GLN 4 0.053 15.615 4.822 1.00 9.90 ATOM 28 OE1 GLN 4 -0.933 14.890 4.901 1.00 9.90 ATOM 29 NE2 GLN 4 1.202 15.162 5.284 1.00 9.90 ATOM 30 N GLY 5 0.552 19.899 2.398 1.00 10.90 ATOM 31 CA GLY 5 1.478 20.195 1.287 1.00 10.90 ATOM 32 C GLY 5 2.739 21.004 1.669 1.00 10.90 ATOM 33 O GLY 5 2.880 21.402 2.831 1.00 10.90 ATOM 34 N PRO 6 3.661 21.249 0.708 1.00 11.40 ATOM 35 CA PRO 6 4.991 21.827 0.964 1.00 11.40 ATOM 36 C PRO 6 4.995 23.298 1.419 1.00 11.40 ATOM 37 O PRO 6 3.994 24.012 1.309 1.00 11.40 ATOM 38 CB PRO 6 5.803 21.629 -0.326 1.00 11.80 ATOM 39 CG PRO 6 5.054 20.528 -1.070 1.00 11.80 ATOM 40 CD PRO 6 3.604 20.787 -0.676 1.00 11.80 ATOM 41 N TRP 7 6.145 23.751 1.928 1.00 9.60 ATOM 42 CA TRP 7 6.329 25.027 2.634 1.00 9.60 ATOM 43 C TRP 7 6.838 26.212 1.794 1.00 9.60 ATOM 44 O TRP 7 7.702 26.065 0.927 1.00 9.60 ATOM 45 CB TRP 7 7.227 24.772 3.861 1.00 10.90 ATOM 46 CG TRP 7 8.509 24.014 3.635 1.00 10.90 ATOM 47 CD1 TRP 7 8.638 22.669 3.717 1.00 10.90 ATOM 48 CD2 TRP 7 9.849 24.516 3.314 1.00 10.90 ATOM 49 NE1 TRP 7 9.946 22.304 3.464 1.00 10.90 ATOM 50 CE2 TRP 7 10.743 23.404 3.235 1.00 10.90 ATOM 51 CE3 TRP 7 10.411 25.796 3.113 1.00 10.90 ATOM 52 CZ2 TRP 7 12.115 23.552 2.982 1.00 10.90 ATOM 53 CZ3 TRP 7 11.789 25.959 2.864 1.00 10.90 ATOM 54 CH2 TRP 7 12.642 24.843 2.801 1.00 10.90 ATOM 55 N VAL 8 6.338 27.413 2.134 1.00 9.80 ATOM 56 CA VAL 8 6.807 28.712 1.606 1.00 9.80 ATOM 57 C VAL 8 8.188 29.096 2.152 1.00 9.80 ATOM 58 O VAL 8 9.071 29.452 1.369 1.00 9.80 ATOM 59 CB VAL 8 5.755 29.812 1.894 1.00 9.90 ATOM 60 CG1 VAL 8 6.289 31.249 1.926 1.00 9.90 ATOM 61 CG2 VAL 8 4.674 29.771 0.813 1.00 9.90 ATOM 62 N GLY 9 8.387 29.037 3.477 1.00 10.20 ATOM 63 CA GLY 9 9.636 29.462 4.127 1.00 10.20 ATOM 64 C GLY 9 9.477 30.005 5.553 1.00 10.20 ATOM 65 O GLY 9 8.428 29.857 6.188 1.00 10.20 ATOM 66 N SER 10 10.539 30.659 6.034 1.00 10.90 ATOM 67 CA SER 10 10.612 31.345 7.336 1.00 10.90 ATOM 68 C SER 10 9.494 32.386 7.522 1.00 10.90 ATOM 69 O SER 10 8.955 32.912 6.544 1.00 10.90 ATOM 70 CB SER 10 11.992 32.002 7.480 1.00 11.40 ATOM 71 OG SER 10 12.156 32.588 8.762 1.00 11.40 ATOM 72 N SER 11 9.141 32.676 8.780 1.00 9.90 ATOM 73 CA SER 11 7.974 33.463 9.226 1.00 9.90 ATOM 74 C SER 11 6.635 32.797 8.889 1.00 9.90 ATOM 75 O SER 11 5.874 32.451 9.795 1.00 9.90 ATOM 76 CB SER 11 8.013 34.915 8.717 1.00 10.10 ATOM 77 OG SER 11 9.250 35.544 9.036 1.00 10.10 ATOM 78 N TYR 12 6.371 32.541 7.606 1.00 8.60 ATOM 79 CA TYR 12 5.105 31.994 7.121 1.00 8.60 ATOM 80 C TYR 12 4.819 30.589 7.663 1.00 8.60 ATOM 81 O TYR 12 3.689 30.342 8.062 1.00 8.60 ATOM 82 CB TYR 12 5.065 32.045 5.586 1.00 9.00 ATOM 83 CG TYR 12 5.338 33.432 5.024 1.00 9.00 ATOM 84 CD1 TYR 12 6.578 33.724 4.422 1.00 9.00 ATOM 85 CD2 TYR 12 4.373 34.449 5.164 1.00 9.00 ATOM 86 CE1 TYR 12 6.852 35.023 3.953 1.00 9.00 ATOM 87 CE2 TYR 12 4.657 35.755 4.723 1.00 9.00 ATOM 88 CZ TYR 12 5.897 36.045 4.118 1.00 9.00 ATOM 89 OH TYR 12 6.188 37.319 3.729 1.00 9.00 ATOM 90 N VAL 13 5.809 29.695 7.782 1.00 9.20 ATOM 91 CA VAL 13 5.616 28.360 8.400 1.00 9.20 ATOM 92 C VAL 13 5.037 28.450 9.823 1.00 9.20 ATOM 93 O VAL 13 4.102 27.717 10.145 1.00 9.20 ATOM 94 CB VAL 13 6.939 27.555 8.355 1.00 9.60 ATOM 95 CG1 VAL 13 7.070 26.453 9.414 1.00 9.60 ATOM 96 CG2 VAL 13 7.075 26.882 6.984 1.00 9.60 ATOM 97 N ALA 14 5.532 29.365 10.663 1.00 9.80 ATOM 98 CA ALA 14 5.037 29.550 12.032 1.00 9.80 ATOM 99 C ALA 14 3.702 30.316 12.084 1.00 9.80 ATOM 100 O ALA 14 2.770 29.921 12.782 1.00 9.80 ATOM 101 CB ALA 14 6.126 30.261 12.844 1.00 10.00 ATOM 102 N GLU 15 3.573 31.401 11.322 1.00 8.90 ATOM 103 CA GLU 15 2.369 32.243 11.321 1.00 8.90 ATOM 104 C GLU 15 1.161 31.500 10.734 1.00 8.90 ATOM 105 O GLU 15 0.081 31.489 11.324 1.00 8.90 ATOM 106 CB GLU 15 2.670 33.543 10.556 1.00 9.00 ATOM 107 CG GLU 15 3.673 34.419 11.332 1.00 9.00 ATOM 108 CD GLU 15 4.474 35.415 10.465 1.00 9.00 ATOM 109 OE1 GLU 15 4.270 35.506 9.231 1.00 9.00 ATOM 110 OE2 GLU 15 5.334 36.128 11.041 1.00 9.00 ATOM 111 N THR 16 1.369 30.802 9.617 1.00 8.30 ATOM 112 CA THR 16 0.360 29.987 8.918 1.00 8.30 ATOM 113 C THR 16 0.064 28.692 9.688 1.00 8.30 ATOM 114 O THR 16 -1.100 28.320 9.849 1.00 8.30 ATOM 115 CB THR 16 0.850 29.668 7.486 1.00 8.30 ATOM 116 OG1 THR 16 1.243 30.849 6.821 1.00 8.30 ATOM 117 CG2 THR 16 -0.198 29.088 6.558 1.00 8.30 ATOM 118 N GLY 17 1.104 28.015 10.187 1.00 9.40 ATOM 119 CA GLY 17 1.031 26.661 10.755 1.00 9.40 ATOM 120 C GLY 17 0.868 26.558 12.278 1.00 9.40 ATOM 121 O GLY 17 0.601 25.459 12.768 1.00 9.40 ATOM 122 N GLN 18 1.001 27.659 13.031 1.00 9.90 ATOM 123 CA GLN 18 0.809 27.693 14.494 1.00 9.90 ATOM 124 C GLN 18 -0.135 28.817 14.943 1.00 9.90 ATOM 125 O GLN 18 -1.151 28.527 15.571 1.00 9.90 ATOM 126 CB GLN 18 2.156 27.772 15.244 1.00 10.40 ATOM 127 CG GLN 18 3.124 26.599 14.997 1.00 10.40 ATOM 128 CD GLN 18 2.727 25.283 15.675 1.00 10.40 ATOM 129 OE1 GLN 18 1.665 25.119 16.267 1.00 10.40 ATOM 130 NE2 GLN 18 3.588 24.286 15.642 1.00 10.40 ATOM 131 N ASN 19 0.138 30.086 14.606 1.00 9.10 ATOM 132 CA ASN 19 -0.681 31.213 15.090 1.00 9.10 ATOM 133 C ASN 19 -2.097 31.212 14.487 1.00 9.10 ATOM 134 O ASN 19 -3.083 31.119 15.223 1.00 9.10 ATOM 135 CB ASN 19 0.053 32.551 14.870 1.00 9.10 ATOM 136 CG ASN 19 1.307 32.701 15.722 1.00 9.10 ATOM 137 OD1 ASN 19 1.417 32.182 16.826 1.00 9.10 ATOM 138 ND2 ASN 19 2.298 33.424 15.249 1.00 9.10 ATOM 139 N TRP 20 -2.220 31.235 13.155 1.00 8.80 ATOM 140 CA TRP 20 -3.527 31.134 12.490 1.00 8.80 ATOM 141 C TRP 20 -4.170 29.749 12.643 1.00 8.80 ATOM 142 O TRP 20 -5.389 29.655 12.769 1.00 8.80 ATOM 143 CB TRP 20 -3.410 31.567 11.024 1.00 9.30 ATOM 144 CG TRP 20 -3.182 33.039 10.848 1.00 9.30 ATOM 145 CD1 TRP 20 -2.115 33.619 10.253 1.00 9.30 ATOM 146 CD2 TRP 20 -4.043 34.141 11.278 1.00 9.30 ATOM 147 NE1 TRP 20 -2.254 34.993 10.288 1.00 9.30 ATOM 148 CE2 TRP 20 -3.416 35.372 10.925 1.00 9.30 ATOM 149 CE3 TRP 20 -5.281 34.224 11.950 1.00 9.30 ATOM 150 CZ2 TRP 20 -3.987 36.618 11.230 1.00 9.30 ATOM 151 CZ3 TRP 20 -5.866 35.467 12.258 1.00 9.30 ATOM 152 CH2 TRP 20 -5.215 36.663 11.909 1.00 9.30 ATOM 153 N ALA 21 -3.368 28.680 12.736 1.00 10.10 ATOM 154 CA ALA 21 -3.864 27.333 13.048 1.00 10.10 ATOM 155 C ALA 21 -4.550 27.265 14.432 1.00 10.10 ATOM 156 O ALA 21 -5.631 26.687 14.565 1.00 10.10 ATOM 157 CB ALA 21 -2.689 26.351 12.956 1.00 10.10 ATOM 158 N SER 22 -3.966 27.907 15.453 1.00 10.60 ATOM 159 CA SER 22 -4.548 28.012 16.799 1.00 10.60 ATOM 160 C SER 22 -5.830 28.853 16.805 1.00 10.60 ATOM 161 O SER 22 -6.848 28.416 17.343 1.00 10.60 ATOM 162 CB SER 22 -3.519 28.600 17.773 1.00 10.60 ATOM 163 OG SER 22 -4.075 28.724 19.073 1.00 10.60 ATOM 164 N LEU 23 -5.828 30.018 16.143 1.00 10.20 ATOM 165 CA LEU 23 -7.017 30.877 16.039 1.00 10.20 ATOM 166 C LEU 23 -8.183 30.175 15.313 1.00 10.20 ATOM 167 O LEU 23 -9.330 30.299 15.747 1.00 10.20 ATOM 168 CB LEU 23 -6.632 32.216 15.378 1.00 9.80 ATOM 169 CG LEU 23 -5.779 33.125 16.291 1.00 9.80 ATOM 170 CD1 LEU 23 -5.171 34.275 15.492 1.00 9.80 ATOM 171 CD2 LEU 23 -6.605 33.738 17.426 1.00 9.80 ATOM 172 N ALA 24 -7.899 29.368 14.283 1.00 10.60 ATOM 173 CA ALA 24 -8.889 28.510 13.628 1.00 10.60 ATOM 174 C ALA 24 -9.486 27.449 14.568 1.00 10.60 ATOM 175 O ALA 24 -10.706 27.297 14.633 1.00 10.60 ATOM 176 CB ALA 24 -8.237 27.845 12.408 1.00 10.60 ATOM 177 N ALA 25 -8.639 26.733 15.317 1.00 12.10 ATOM 178 CA ALA 25 -9.077 25.712 16.269 1.00 12.10 ATOM 179 C ALA 25 -9.858 26.298 17.466 1.00 12.10 ATOM 180 O ALA 25 -10.782 25.658 17.976 1.00 12.10 ATOM 181 CB ALA 25 -7.838 24.936 16.731 1.00 12.10 ATOM 182 N ASN 26 -9.513 27.516 17.904 1.00 12.40 ATOM 183 CA ASN 26 -10.160 28.216 19.014 1.00 12.40 ATOM 184 C ASN 26 -11.608 28.641 18.694 1.00 12.40 ATOM 185 O ASN 26 -12.517 28.341 19.471 1.00 12.40 ATOM 186 CB ASN 26 -9.294 29.428 19.402 1.00 12.10 ATOM 187 CG ASN 26 -9.918 30.232 20.533 1.00 12.10 ATOM 188 OD1 ASN 26 -10.088 29.756 21.647 1.00 12.10 ATOM 189 ND2 ASN 26 -10.294 31.469 20.287 1.00 12.10 ATOM 190 N GLU 27 -11.833 29.340 17.574 1.00 12.70 ATOM 191 CA GLU 27 -13.153 29.885 17.219 1.00 12.70 ATOM 192 C GLU 27 -13.326 30.077 15.699 1.00 12.70 ATOM 193 O GLU 27 -12.718 30.958 15.087 1.00 12.70 ATOM 194 CB GLU 27 -13.387 31.190 18.004 1.00 13.10 ATOM 195 CG GLU 27 -14.814 31.732 17.837 1.00 13.10 ATOM 196 CD GLU 27 -15.224 32.696 18.971 1.00 13.10 ATOM 197 OE1 GLU 27 -14.370 33.448 19.503 1.00 13.10 ATOM 198 OE2 GLU 27 -16.427 32.711 19.329 1.00 13.10 ATOM 199 N LEU 28 -14.186 29.251 15.087 1.00 12.80 ATOM 200 CA LEU 28 -14.367 29.165 13.626 1.00 12.80 ATOM 201 C LEU 28 -15.174 30.338 13.029 1.00 12.80 ATOM 202 O LEU 28 -14.993 30.685 11.862 1.00 12.80 ATOM 203 CB LEU 28 -15.055 27.820 13.307 1.00 13.10 ATOM 204 CG LEU 28 -14.205 26.578 13.653 1.00 13.10 ATOM 205 CD1 LEU 28 -15.097 25.343 13.788 1.00 13.10 ATOM 206 CD2 LEU 28 -13.155 26.299 12.577 1.00 13.10 ATOM 207 N ARG 29 -16.067 30.953 13.822 1.00 13.00 ATOM 208 CA ARG 29 -16.957 32.054 13.387 1.00 13.00 ATOM 209 C ARG 29 -16.297 33.438 13.328 1.00 13.00 ATOM 210 O ARG 29 -16.878 34.350 12.749 1.00 13.00 ATOM 211 CB ARG 29 -18.238 32.068 14.251 1.00 14.60 ATOM 212 CG ARG 29 -17.972 32.382 15.731 1.00 14.60 ATOM 213 CD ARG 29 -19.244 32.371 16.583 1.00 14.60 ATOM 214 NE ARG 29 -18.890 32.560 18.000 1.00 14.60 ATOM 215 CZ ARG 29 -19.678 32.638 19.050 1.00 14.60 ATOM 216 NH1 ARG 29 -19.120 32.772 20.215 1.00 14.60 ATOM 217 NH2 ARG 29 -20.978 32.583 18.971 1.00 14.60 ATOM 218 N VAL 30 -15.127 33.639 13.939 1.00 11.10 ATOM 219 CA VAL 30 -14.451 34.954 13.986 1.00 11.10 ATOM 220 C VAL 30 -13.368 35.075 12.907 1.00 11.10 ATOM 221 O VAL 30 -12.639 34.125 12.612 1.00 11.10 ATOM 222 CB VAL 30 -13.916 35.279 15.398 1.00 10.90 ATOM 223 CG1 VAL 30 -13.180 36.626 15.461 1.00 10.90 ATOM 224 CG2 VAL 30 -15.079 35.373 16.395 1.00 10.90 ATOM 225 N THR 31 -13.247 36.276 12.339 1.00 9.80 ATOM 226 CA THR 31 -12.200 36.671 11.386 1.00 9.80 ATOM 227 C THR 31 -11.656 38.050 11.778 1.00 9.80 ATOM 228 O THR 31 -12.415 38.988 12.033 1.00 9.80 ATOM 229 CB THR 31 -12.662 36.535 9.919 1.00 10.40 ATOM 230 OG1 THR 31 -12.114 37.500 9.054 1.00 10.40 ATOM 231 CG2 THR 31 -14.160 36.564 9.683 1.00 10.40 ATOM 232 N GLU 32 -10.333 38.129 11.967 1.00 7.90 ATOM 233 CA GLU 32 -9.651 39.288 12.570 1.00 7.90 ATOM 234 C GLU 32 -9.455 40.463 11.589 1.00 7.90 ATOM 235 O GLU 32 -9.505 40.274 10.376 1.00 7.90 ATOM 236 CB GLU 32 -8.295 38.865 13.165 1.00 7.70 ATOM 237 CG GLU 32 -8.315 37.682 14.149 1.00 7.70 ATOM 238 CD GLU 32 -9.191 37.902 15.401 1.00 7.70 ATOM 239 OE1 GLU 32 -9.431 39.065 15.811 1.00 7.70 ATOM 240 OE2 GLU 32 -9.622 36.891 16.007 1.00 7.70 ATOM 241 N ARG 33 -9.216 41.673 12.124 1.00 8.70 ATOM 242 CA ARG 33 -9.081 42.956 11.389 1.00 8.70 ATOM 243 C ARG 33 -7.680 43.175 10.737 1.00 8.70 ATOM 244 O ARG 33 -6.782 42.361 10.960 1.00 8.70 ATOM 245 CB ARG 33 -9.582 44.075 12.335 1.00 10.80 ATOM 246 CG ARG 33 -8.632 44.403 13.499 1.00 10.80 ATOM 247 CD ARG 33 -9.171 45.548 14.370 1.00 10.80 ATOM 248 NE ARG 33 -8.770 46.878 13.853 1.00 10.80 ATOM 249 CZ ARG 33 -8.405 47.929 14.574 1.00 10.80 ATOM 250 NH1 ARG 33 -8.008 49.028 13.998 1.00 10.80 ATOM 251 NH2 ARG 33 -8.424 47.918 15.877 1.00 10.80 ATOM 252 N PRO 34 -7.428 44.266 9.971 1.00 8.90 ATOM 253 CA PRO 34 -6.232 44.414 9.118 1.00 8.90 ATOM 254 C PRO 34 -4.855 44.353 9.791 1.00 8.90 ATOM 255 O PRO 34 -3.929 43.792 9.212 1.00 8.90 ATOM 256 CB PRO 34 -6.364 45.774 8.425 1.00 9.80 ATOM 257 CG PRO 34 -7.854 46.065 8.449 1.00 9.80 ATOM 258 CD PRO 34 -8.347 45.365 9.707 1.00 9.80 ATOM 259 N PHE 35 -4.683 44.923 10.989 1.00 8.80 ATOM 260 CA PHE 35 -3.345 45.100 11.589 1.00 8.80 ATOM 261 C PHE 35 -2.622 43.768 11.874 1.00 8.80 ATOM 262 O PHE 35 -1.390 43.731 11.888 1.00 8.80 ATOM 263 CB PHE 35 -3.440 45.986 12.843 1.00 10.30 ATOM 264 CG PHE 35 -3.414 47.481 12.546 1.00 10.30 ATOM 265 CD1 PHE 35 -4.509 48.118 11.926 1.00 10.30 ATOM 266 CD2 PHE 35 -2.272 48.239 12.876 1.00 10.30 ATOM 267 CE1 PHE 35 -4.457 49.494 11.635 1.00 10.30 ATOM 268 CE2 PHE 35 -2.224 49.617 12.591 1.00 10.30 ATOM 269 CZ PHE 35 -3.315 50.243 11.968 1.00 10.30 ATOM 270 N TRP 36 -3.366 42.665 12.019 1.00 6.50 ATOM 271 CA TRP 36 -2.807 41.310 12.072 1.00 6.50 ATOM 272 C TRP 36 -2.168 40.915 10.733 1.00 6.50 ATOM 273 O TRP 36 -0.994 40.547 10.683 1.00 6.50 ATOM 274 CB TRP 36 -3.912 40.317 12.462 1.00 7.90 ATOM 275 CG TRP 36 -4.555 40.541 13.797 1.00 7.90 ATOM 276 CD1 TRP 36 -5.663 41.282 14.025 1.00 7.90 ATOM 277 CD2 TRP 36 -4.146 40.031 15.104 1.00 7.90 ATOM 278 NE1 TRP 36 -5.977 41.256 15.370 1.00 7.90 ATOM 279 CE2 TRP 36 -5.084 40.485 16.081 1.00 7.90 ATOM 280 CE3 TRP 36 -3.088 39.216 15.564 1.00 7.90 ATOM 281 CZ2 TRP 36 -4.988 40.138 17.437 1.00 7.90 ATOM 282 CZ3 TRP 36 -2.983 38.857 16.923 1.00 7.90 ATOM 283 CH2 TRP 36 -3.931 39.314 17.858 1.00 7.90 ATOM 284 N ILE 37 -2.908 41.021 9.621 1.00 5.30 ATOM 285 CA ILE 37 -2.414 40.561 8.314 1.00 5.30 ATOM 286 C ILE 37 -1.377 41.499 7.701 1.00 5.30 ATOM 287 O ILE 37 -0.440 41.019 7.072 1.00 5.30 ATOM 288 CB ILE 37 -3.577 40.225 7.361 1.00 5.90 ATOM 289 CG1 ILE 37 -3.214 39.177 6.301 1.00 5.90 ATOM 290 CG2 ILE 37 -4.215 41.445 6.676 1.00 5.90 ATOM 291 CD1 ILE 37 -2.751 37.832 6.870 1.00 5.90 ATOM 292 N SER 38 -1.458 42.807 7.958 1.00 6.40 ATOM 293 CA SER 38 -0.398 43.758 7.591 1.00 6.40 ATOM 294 C SER 38 0.925 43.493 8.330 1.00 6.40 ATOM 295 O SER 38 1.988 43.870 7.831 1.00 6.40 ATOM 296 CB SER 38 -0.856 45.198 7.849 1.00 7.20 ATOM 297 OG SER 38 -2.007 45.501 7.071 1.00 7.20 ATOM 298 N SER 39 0.887 42.824 9.493 1.00 5.60 ATOM 299 CA SER 39 2.084 42.354 10.206 1.00 5.60 ATOM 300 C SER 39 2.637 41.050 9.608 1.00 5.60 ATOM 301 O SER 39 3.807 40.996 9.217 1.00 5.60 ATOM 302 CB SER 39 1.787 42.191 11.703 1.00 6.10 ATOM 303 OG SER 39 2.970 41.842 12.404 1.00 6.10 ATOM 304 N PHE 40 1.805 40.005 9.490 1.00 4.00 ATOM 305 CA PHE 40 2.248 38.678 9.037 1.00 4.00 ATOM 306 C PHE 40 2.531 38.613 7.523 1.00 4.00 ATOM 307 O PHE 40 3.598 38.158 7.108 1.00 4.00 ATOM 308 CB PHE 40 1.226 37.621 9.478 1.00 5.10 ATOM 309 CG PHE 40 0.947 37.581 10.976 1.00 5.10 ATOM 310 CD1 PHE 40 -0.380 37.565 11.444 1.00 5.10 ATOM 311 CD2 PHE 40 2.004 37.549 11.908 1.00 5.10 ATOM 312 CE1 PHE 40 -0.651 37.491 12.822 1.00 5.10 ATOM 313 CE2 PHE 40 1.736 37.490 13.288 1.00 5.10 ATOM 314 CZ PHE 40 0.408 37.456 13.746 1.00 5.10 ATOM 315 N ILE 41 1.638 39.151 6.683 1.00 4.40 ATOM 316 CA ILE 41 1.851 39.368 5.236 1.00 4.40 ATOM 317 C ILE 41 2.574 40.722 5.036 1.00 4.40 ATOM 318 O ILE 41 2.175 41.592 4.261 1.00 4.40 ATOM 319 CB ILE 41 0.529 39.150 4.443 1.00 5.40 ATOM 320 CG1 ILE 41 -0.071 37.745 4.703 1.00 5.40 ATOM 321 CG2 ILE 41 0.671 39.332 2.920 1.00 5.40 ATOM 322 CD1 ILE 41 0.734 36.551 4.175 1.00 5.40 ATOM 323 N GLY 42 3.661 40.915 5.791 1.00 3.90 ATOM 324 CA GLY 42 4.494 42.122 5.830 1.00 3.90 ATOM 325 C GLY 42 5.497 42.214 4.674 1.00 3.90 ATOM 326 O GLY 42 6.691 42.415 4.912 1.00 3.90 ATOM 327 N ARG 43 5.030 42.020 3.431 1.00 3.70 ATOM 328 CA ARG 43 5.849 41.975 2.205 1.00 3.70 ATOM 329 C ARG 43 5.314 42.938 1.139 1.00 3.70 ATOM 330 O ARG 43 4.113 42.969 0.872 1.00 3.70 ATOM 331 CB ARG 43 5.897 40.521 1.683 1.00 4.70 ATOM 332 CG ARG 43 7.145 40.184 0.842 1.00 4.70 ATOM 333 CD ARG 43 8.449 40.100 1.653 1.00 4.70 ATOM 334 NE ARG 43 8.390 39.043 2.685 1.00 4.70 ATOM 335 CZ ARG 43 9.323 38.727 3.565 1.00 4.70 ATOM 336 NH1 ARG 43 9.076 37.814 4.459 1.00 4.70 ATOM 337 NH2 ARG 43 10.495 39.296 3.580 1.00 4.70 ATOM 338 N SER 44 6.212 43.694 0.507 1.00 4.70 ATOM 339 CA SER 44 5.895 44.607 -0.607 1.00 4.70 ATOM 340 C SER 44 5.802 43.886 -1.963 1.00 4.70 ATOM 341 O SER 44 4.948 44.221 -2.787 1.00 4.70 ATOM 342 CB SER 44 6.958 45.711 -0.655 1.00 5.30 ATOM 343 OG SER 44 8.261 45.156 -0.792 1.00 5.30 ATOM 344 N LYS 45 6.651 42.870 -2.191 1.00 4.10 ATOM 345 CA LYS 45 6.782 42.109 -3.453 1.00 4.10 ATOM 346 C LYS 45 5.745 40.982 -3.604 1.00 4.10 ATOM 347 O LYS 45 6.081 39.805 -3.744 1.00 4.10 ATOM 348 CB LYS 45 8.239 41.632 -3.627 1.00 4.80 ATOM 349 CG LYS 45 9.205 42.819 -3.779 1.00 4.80 ATOM 350 CD LYS 45 10.630 42.353 -4.099 1.00 4.80 ATOM 351 CE LYS 45 11.542 43.575 -4.272 1.00 4.80 ATOM 352 NZ LYS 45 12.931 43.181 -4.631 1.00 4.80 TER END