####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS472_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 7 - 26 4.82 8.65 LONGEST_CONTINUOUS_SEGMENT: 20 8 - 27 4.88 8.42 LONGEST_CONTINUOUS_SEGMENT: 20 13 - 32 4.93 8.46 LONGEST_CONTINUOUS_SEGMENT: 20 23 - 42 4.77 9.50 LCS_AVERAGE: 43.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.82 14.33 LCS_AVERAGE: 15.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.65 15.99 LCS_AVERAGE: 11.78 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 13 3 3 3 3 4 5 7 7 8 10 12 15 15 16 19 21 23 28 29 31 LCS_GDT V 3 V 3 4 6 13 3 3 4 5 5 5 6 6 8 10 10 11 12 14 16 17 18 20 22 23 LCS_GDT Q 4 Q 4 4 6 13 3 3 4 5 5 5 7 7 10 14 15 20 23 24 27 34 36 38 39 39 LCS_GDT G 5 G 5 4 6 19 3 3 4 8 10 11 12 14 15 17 20 24 26 29 33 35 36 38 39 39 LCS_GDT P 6 P 6 4 6 19 3 3 4 5 5 6 8 10 11 16 19 21 26 28 33 35 36 38 39 39 LCS_GDT W 7 W 7 3 6 20 3 3 4 5 5 6 7 8 11 17 19 21 26 29 33 35 36 38 39 39 LCS_GDT V 8 V 8 3 4 20 3 3 3 4 5 6 9 12 17 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT G 9 G 9 3 4 20 0 3 3 4 6 9 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT S 10 S 10 4 4 20 4 4 4 4 10 11 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT S 11 S 11 4 4 20 4 4 4 6 6 7 11 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT Y 12 Y 12 4 4 20 4 4 4 4 4 5 6 8 11 12 16 18 21 27 28 32 35 38 39 39 LCS_GDT V 13 V 13 4 4 20 4 4 4 4 5 6 8 9 12 17 22 24 26 29 31 35 36 38 39 39 LCS_GDT A 14 A 14 4 4 20 3 3 4 6 6 9 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT E 15 E 15 4 5 20 3 3 4 6 8 9 10 14 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT T 16 T 16 4 5 20 3 3 4 4 5 9 10 12 16 17 19 24 26 29 33 35 36 38 39 39 LCS_GDT G 17 G 17 3 5 20 3 3 4 6 8 9 10 13 16 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT Q 18 Q 18 4 5 20 3 4 4 6 8 9 11 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT N 19 N 19 4 11 20 3 4 4 8 10 11 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT W 20 W 20 10 11 20 6 10 10 10 10 10 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT A 21 A 21 10 11 20 6 10 10 10 10 11 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT S 22 S 22 10 11 20 6 10 10 10 10 11 12 16 17 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT L 23 L 23 10 11 20 6 10 10 10 10 10 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT A 24 A 24 10 11 20 6 10 10 10 10 11 12 14 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT A 25 A 25 10 11 20 6 10 10 10 10 11 12 14 17 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT N 26 N 26 10 11 20 5 10 10 10 10 11 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT E 27 E 27 10 11 20 5 10 10 10 10 11 12 14 15 16 19 24 26 29 33 35 36 37 39 39 LCS_GDT L 28 L 28 10 11 20 5 10 10 10 10 11 12 14 14 16 19 21 23 26 28 29 32 35 36 39 LCS_GDT R 29 R 29 10 11 20 5 10 10 10 10 11 12 14 15 16 20 24 25 28 30 31 34 35 36 39 LCS_GDT V 30 V 30 4 5 20 3 4 4 5 6 9 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT T 31 T 31 4 5 20 3 4 4 5 5 6 12 16 18 20 23 25 26 29 33 35 36 38 39 39 LCS_GDT E 32 E 32 4 7 20 3 4 5 6 6 8 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT R 33 R 33 4 7 20 3 4 5 6 6 9 9 10 14 19 23 25 26 29 33 35 36 38 39 39 LCS_GDT P 34 P 34 4 7 20 2 4 5 6 6 9 9 10 12 14 19 20 24 29 33 35 36 38 39 39 LCS_GDT F 35 F 35 4 7 20 3 4 4 5 6 9 9 10 12 14 19 23 26 29 33 35 36 38 39 39 LCS_GDT W 36 W 36 4 7 20 3 3 4 6 6 9 9 10 12 15 20 23 26 29 33 35 36 38 39 39 LCS_GDT I 37 I 37 4 7 20 3 3 5 6 6 9 9 10 12 18 21 25 26 29 33 35 36 38 39 39 LCS_GDT S 38 S 38 4 7 20 0 3 5 6 6 9 9 12 16 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT S 39 S 39 3 4 20 2 3 4 6 8 9 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT F 40 F 40 3 4 20 3 3 4 6 8 9 12 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT I 41 I 41 4 5 20 3 3 4 6 8 9 11 16 18 21 23 25 26 29 33 35 36 38 39 39 LCS_GDT G 42 G 42 4 5 20 3 3 4 6 8 9 10 12 16 17 21 24 26 29 33 35 36 38 39 39 LCS_GDT R 43 R 43 4 5 15 3 3 4 5 5 6 7 10 11 14 19 21 24 26 28 32 36 38 39 39 LCS_GDT S 44 S 44 4 5 11 3 3 4 5 5 6 7 10 11 14 17 21 24 26 27 32 33 38 39 39 LCS_GDT K 45 K 45 3 5 11 0 3 4 5 5 6 7 9 10 13 17 19 20 22 23 30 32 34 35 39 LCS_AVERAGE LCS_A: 23.40 ( 11.78 15.34 43.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 10 10 10 11 12 16 18 21 23 25 26 29 33 35 36 38 39 39 GDT PERCENT_AT 13.64 22.73 22.73 22.73 22.73 25.00 27.27 36.36 40.91 47.73 52.27 56.82 59.09 65.91 75.00 79.55 81.82 86.36 88.64 88.64 GDT RMS_LOCAL 0.32 0.65 0.65 0.65 0.65 1.95 2.21 3.16 3.48 3.85 4.01 4.33 4.45 4.88 5.45 5.64 5.95 6.22 6.31 6.31 GDT RMS_ALL_AT 17.10 15.99 15.99 15.99 15.99 11.92 11.91 8.66 8.57 8.46 8.56 8.51 8.39 8.61 7.79 7.77 7.52 7.48 7.46 7.46 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 17.735 0 0.105 0.135 17.974 0.000 0.000 - LGA V 3 V 3 17.615 0 0.603 0.585 19.750 0.000 0.000 17.970 LGA Q 4 Q 4 14.760 0 0.077 1.366 20.283 0.000 0.000 18.899 LGA G 5 G 5 9.834 0 0.096 0.096 12.363 0.000 0.000 - LGA P 6 P 6 11.080 0 0.366 0.348 12.863 0.000 0.000 12.863 LGA W 7 W 7 10.491 0 0.533 1.440 19.573 0.000 0.000 19.472 LGA V 8 V 8 5.864 0 0.626 0.777 7.406 2.727 1.558 5.700 LGA G 9 G 9 3.254 0 0.500 0.500 4.521 12.273 12.273 - LGA S 10 S 10 3.137 0 0.638 0.661 5.333 17.273 13.333 5.333 LGA S 11 S 11 3.694 0 0.116 0.768 7.510 12.273 13.030 3.607 LGA Y 12 Y 12 8.412 0 0.669 0.953 16.868 0.000 0.000 16.868 LGA V 13 V 13 6.273 0 0.554 0.660 7.114 0.000 0.260 4.920 LGA A 14 A 14 2.549 0 0.090 0.103 5.035 12.727 30.182 - LGA E 15 E 15 6.620 0 0.589 1.189 11.597 0.455 0.202 11.597 LGA T 16 T 16 9.607 0 0.704 0.968 13.341 0.000 0.000 10.078 LGA G 17 G 17 8.381 0 0.661 0.661 8.757 0.000 0.000 - LGA Q 18 Q 18 5.249 0 0.399 0.475 11.313 4.545 2.020 7.320 LGA N 19 N 19 2.271 0 0.199 1.243 6.119 38.182 20.455 6.119 LGA W 20 W 20 2.378 0 0.604 1.237 10.395 52.273 15.195 8.284 LGA A 21 A 21 3.784 0 0.052 0.054 5.983 19.545 15.636 - LGA S 22 S 22 3.672 0 0.018 0.680 5.316 32.727 22.121 4.890 LGA L 23 L 23 2.908 0 0.119 1.384 9.658 25.455 12.955 9.148 LGA A 24 A 24 5.583 0 0.087 0.097 6.955 2.727 2.182 - LGA A 25 A 25 6.016 0 0.074 0.071 6.745 0.000 0.000 - LGA N 26 N 26 2.930 0 0.081 0.123 5.279 12.727 27.727 2.792 LGA E 27 E 27 7.047 0 0.042 0.083 9.719 0.000 0.000 7.466 LGA L 28 L 28 9.900 0 0.260 0.296 13.263 0.000 0.000 11.627 LGA R 29 R 29 8.217 0 0.275 1.104 15.688 0.000 0.000 15.630 LGA V 30 V 30 3.841 0 0.601 0.569 5.687 7.727 5.195 5.079 LGA T 31 T 31 3.255 0 0.104 1.189 7.083 25.455 14.545 5.526 LGA E 32 E 32 2.882 0 0.494 1.379 9.161 16.818 7.475 9.161 LGA R 33 R 33 8.308 0 0.589 1.168 10.618 0.000 0.000 8.763 LGA P 34 P 34 12.967 0 0.568 0.651 14.722 0.000 0.000 14.071 LGA F 35 F 35 10.913 0 0.581 1.345 19.379 0.000 0.000 19.379 LGA W 36 W 36 11.318 0 0.129 1.133 17.303 0.000 0.000 17.303 LGA I 37 I 37 9.267 0 0.622 1.489 13.372 0.000 0.000 13.372 LGA S 38 S 38 7.438 0 0.660 0.577 9.226 3.182 2.121 8.864 LGA S 39 S 39 2.667 0 0.553 0.773 4.165 19.545 14.848 4.165 LGA F 40 F 40 2.569 0 0.636 0.874 8.434 25.909 14.380 8.192 LGA I 41 I 41 4.052 0 0.097 0.659 7.144 4.091 12.273 2.720 LGA G 42 G 42 8.342 0 0.505 0.505 11.536 0.000 0.000 - LGA R 43 R 43 11.723 0 0.125 1.320 15.588 0.000 0.000 15.588 LGA S 44 S 44 14.257 0 0.487 0.570 15.446 0.000 0.000 15.102 LGA K 45 K 45 16.362 0 0.151 1.281 23.064 0.000 0.000 23.064 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.340 7.148 9.193 7.924 5.908 2.130 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 3.16 40.341 32.354 0.490 LGA_LOCAL RMSD: 3.162 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.656 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.340 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.401327 * X + 0.826581 * Y + -0.394588 * Z + 35.448219 Y_new = -0.807390 * X + -0.522680 * Y + -0.273728 * Z + 59.906696 Z_new = -0.432501 * X + 0.208733 * Y + 0.877139 * Z + -42.763615 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.032095 0.447265 0.233624 [DEG: -116.4305 25.6264 13.3857 ] ZXZ: -0.964308 0.500924 -1.121152 [DEG: -55.2508 28.7008 -64.2373 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS472_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 3.16 32.354 7.34 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS472_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 5.388 44.177 -0.604 1.00 1.00 ATOM 10 CA ALA 2 5.653 43.690 -1.935 1.00 1.00 ATOM 11 CB ALA 2 6.169 42.237 -1.904 1.00 1.00 ATOM 12 C ALA 2 4.367 43.781 -2.724 1.00 1.00 ATOM 13 O ALA 2 3.350 44.236 -2.206 1.00 1.00 ATOM 14 N VAL 3 4.392 43.345 -3.994 1.00 1.00 ATOM 15 CA VAL 3 3.294 43.476 -4.945 1.00 1.00 ATOM 16 CB VAL 3 3.725 42.977 -6.326 1.00 1.00 ATOM 17 CG1 VAL 3 2.633 43.268 -7.377 1.00 1.00 ATOM 18 CG2 VAL 3 5.034 43.684 -6.743 1.00 1.00 ATOM 19 C VAL 3 1.989 42.798 -4.524 1.00 1.00 ATOM 20 O VAL 3 0.914 43.383 -4.619 1.00 1.00 ATOM 21 N GLN 4 2.034 41.536 -4.055 1.00 1.00 ATOM 22 CA GLN 4 0.828 40.825 -3.674 1.00 1.00 ATOM 23 CB GLN 4 0.286 40.017 -4.888 1.00 1.00 ATOM 24 CG GLN 4 -1.081 39.302 -4.694 1.00 1.00 ATOM 25 CD GLN 4 -0.995 37.921 -4.036 1.00 1.00 ATOM 26 OE1 GLN 4 -1.548 37.676 -2.963 1.00 1.00 ATOM 27 NE2 GLN 4 -0.302 36.977 -4.709 1.00 1.00 ATOM 28 C GLN 4 1.093 39.913 -2.491 1.00 1.00 ATOM 29 O GLN 4 2.062 39.157 -2.477 1.00 1.00 ATOM 30 N GLY 5 0.220 39.962 -1.463 1.00 1.00 ATOM 31 CA GLY 5 0.175 38.938 -0.429 1.00 1.00 ATOM 32 C GLY 5 -0.622 39.382 0.776 1.00 1.00 ATOM 33 O GLY 5 -0.583 40.562 1.127 1.00 1.00 ATOM 34 N PRO 6 -1.372 38.518 1.448 1.00 1.00 ATOM 35 CD PRO 6 -1.382 37.072 1.201 1.00 1.00 ATOM 36 CA PRO 6 -2.393 38.928 2.413 1.00 1.00 ATOM 37 CB PRO 6 -3.312 37.690 2.435 1.00 1.00 ATOM 38 CG PRO 6 -2.357 36.511 2.227 1.00 1.00 ATOM 39 C PRO 6 -1.841 39.248 3.804 1.00 1.00 ATOM 40 O PRO 6 -2.256 38.619 4.776 1.00 1.00 ATOM 41 N TRP 7 -0.939 40.246 3.936 1.00 1.00 ATOM 42 CA TRP 7 -0.398 40.757 5.198 1.00 1.00 ATOM 43 CB TRP 7 -1.500 41.410 6.096 1.00 1.00 ATOM 44 CG TRP 7 -1.096 41.836 7.513 1.00 1.00 ATOM 45 CD1 TRP 7 -0.007 42.552 7.942 1.00 1.00 ATOM 46 NE1 TRP 7 0.013 42.609 9.322 1.00 1.00 ATOM 47 CE2 TRP 7 -1.087 41.941 9.805 1.00 1.00 ATOM 48 CD2 TRP 7 -1.809 41.439 8.701 1.00 1.00 ATOM 49 CE3 TRP 7 -2.977 40.698 8.883 1.00 1.00 ATOM 50 CZ3 TRP 7 -3.419 40.479 10.198 1.00 1.00 ATOM 51 CZ2 TRP 7 -1.524 41.723 11.103 1.00 1.00 ATOM 52 CH2 TRP 7 -2.708 40.993 11.291 1.00 1.00 ATOM 53 C TRP 7 0.474 39.782 5.997 1.00 1.00 ATOM 54 O TRP 7 1.669 40.016 6.189 1.00 1.00 ATOM 55 N VAL 8 -0.107 38.697 6.522 1.00 1.00 ATOM 56 CA VAL 8 0.485 37.823 7.518 1.00 1.00 ATOM 57 CB VAL 8 -0.430 37.776 8.741 1.00 1.00 ATOM 58 CG1 VAL 8 -1.604 36.789 8.562 1.00 1.00 ATOM 59 CG2 VAL 8 0.374 37.543 10.036 1.00 1.00 ATOM 60 C VAL 8 0.809 36.451 6.924 1.00 1.00 ATOM 61 O VAL 8 0.445 36.140 5.790 1.00 1.00 ATOM 62 N GLY 9 1.550 35.592 7.653 1.00 1.00 ATOM 63 CA GLY 9 1.940 34.255 7.200 1.00 1.00 ATOM 64 C GLY 9 3.426 34.077 7.121 1.00 1.00 ATOM 65 O GLY 9 4.191 35.035 7.112 1.00 1.00 ATOM 66 N SER 10 3.883 32.820 7.070 1.00 1.00 ATOM 67 CA SER 10 5.289 32.470 6.903 1.00 1.00 ATOM 68 CB SER 10 5.541 30.954 7.108 1.00 1.00 ATOM 69 OG SER 10 5.050 30.493 8.368 1.00 1.00 ATOM 70 C SER 10 5.820 32.802 5.520 1.00 1.00 ATOM 71 O SER 10 5.170 32.528 4.517 1.00 1.00 ATOM 72 N SER 11 7.016 33.412 5.411 1.00 1.00 ATOM 73 CA SER 11 7.550 33.832 4.116 1.00 1.00 ATOM 74 CB SER 11 8.583 34.972 4.205 1.00 1.00 ATOM 75 OG SER 11 8.187 36.003 5.107 1.00 1.00 ATOM 76 C SER 11 8.186 32.702 3.339 1.00 1.00 ATOM 77 O SER 11 7.690 32.276 2.302 1.00 1.00 ATOM 78 N TYR 12 9.300 32.140 3.849 1.00 1.00 ATOM 79 CA TYR 12 9.653 30.771 3.536 1.00 1.00 ATOM 80 CB TYR 12 11.179 30.543 3.721 1.00 1.00 ATOM 81 CG TYR 12 11.595 29.144 3.358 1.00 1.00 ATOM 82 CD1 TYR 12 11.882 28.800 2.027 1.00 1.00 ATOM 83 CE1 TYR 12 12.258 27.488 1.692 1.00 1.00 ATOM 84 CZ TYR 12 12.353 26.515 2.693 1.00 1.00 ATOM 85 OH TYR 12 12.728 25.191 2.395 1.00 1.00 ATOM 86 CD2 TYR 12 11.691 28.156 4.352 1.00 1.00 ATOM 87 CE2 TYR 12 12.067 26.847 4.020 1.00 1.00 ATOM 88 C TYR 12 8.791 29.915 4.466 1.00 1.00 ATOM 89 O TYR 12 8.547 30.285 5.614 1.00 1.00 ATOM 90 N VAL 13 8.230 28.795 3.980 1.00 1.00 ATOM 91 CA VAL 13 7.114 28.154 4.659 1.00 1.00 ATOM 92 CB VAL 13 6.294 27.248 3.739 1.00 1.00 ATOM 93 CG1 VAL 13 4.888 27.049 4.338 1.00 1.00 ATOM 94 CG2 VAL 13 6.195 27.847 2.322 1.00 1.00 ATOM 95 C VAL 13 7.515 27.380 5.917 1.00 1.00 ATOM 96 O VAL 13 7.912 26.216 5.871 1.00 1.00 ATOM 97 N ALA 14 7.395 28.010 7.098 1.00 1.00 ATOM 98 CA ALA 14 7.570 27.375 8.385 1.00 1.00 ATOM 99 CB ALA 14 7.927 28.444 9.440 1.00 1.00 ATOM 100 C ALA 14 6.313 26.618 8.799 1.00 1.00 ATOM 101 O ALA 14 6.331 25.408 9.018 1.00 1.00 ATOM 102 N GLU 15 5.167 27.314 8.881 1.00 1.00 ATOM 103 CA GLU 15 3.906 26.737 9.312 1.00 1.00 ATOM 104 CB GLU 15 2.866 27.867 9.478 1.00 1.00 ATOM 105 CG GLU 15 2.351 28.447 8.136 1.00 1.00 ATOM 106 CD GLU 15 1.682 29.797 8.310 1.00 1.00 ATOM 107 OE1 GLU 15 0.462 29.837 8.600 1.00 1.00 ATOM 108 OE2 GLU 15 2.404 30.819 8.174 1.00 1.00 ATOM 109 C GLU 15 3.339 25.651 8.392 1.00 1.00 ATOM 110 O GLU 15 3.726 25.508 7.230 1.00 1.00 ATOM 111 N THR 16 2.407 24.824 8.905 1.00 1.00 ATOM 112 CA THR 16 1.703 23.832 8.094 1.00 1.00 ATOM 113 CB THR 16 2.322 22.435 8.104 1.00 1.00 ATOM 114 OG1 THR 16 3.692 22.507 7.732 1.00 1.00 ATOM 115 CG2 THR 16 1.664 21.521 7.057 1.00 1.00 ATOM 116 C THR 16 0.281 23.748 8.598 1.00 1.00 ATOM 117 O THR 16 0.044 23.839 9.801 1.00 1.00 ATOM 118 N GLY 17 -0.717 23.598 7.702 1.00 1.00 ATOM 119 CA GLY 17 -2.118 23.419 8.087 1.00 1.00 ATOM 120 C GLY 17 -2.796 24.676 8.577 1.00 1.00 ATOM 121 O GLY 17 -2.457 25.788 8.178 1.00 1.00 ATOM 122 N GLN 18 -3.787 24.550 9.486 1.00 1.00 ATOM 123 CA GLN 18 -4.537 25.692 10.001 1.00 1.00 ATOM 124 CB GLN 18 -5.943 25.287 10.517 1.00 1.00 ATOM 125 CG GLN 18 -6.892 24.788 9.405 1.00 1.00 ATOM 126 CD GLN 18 -7.264 25.876 8.394 1.00 1.00 ATOM 127 OE1 GLN 18 -6.929 27.055 8.509 1.00 1.00 ATOM 128 NE2 GLN 18 -8.002 25.464 7.339 1.00 1.00 ATOM 129 C GLN 18 -3.814 26.486 11.082 1.00 1.00 ATOM 130 O GLN 18 -4.290 26.673 12.201 1.00 1.00 ATOM 131 N ASN 19 -2.648 27.041 10.723 1.00 1.00 ATOM 132 CA ASN 19 -1.996 28.100 11.454 1.00 1.00 ATOM 133 CB ASN 19 -0.465 27.996 11.244 1.00 1.00 ATOM 134 CG ASN 19 0.292 29.061 12.026 1.00 1.00 ATOM 135 OD1 ASN 19 0.564 28.923 13.219 1.00 1.00 ATOM 136 ND2 ASN 19 0.644 30.170 11.347 1.00 1.00 ATOM 137 C ASN 19 -2.594 29.420 10.971 1.00 1.00 ATOM 138 O ASN 19 -3.288 30.098 11.724 1.00 1.00 ATOM 139 N TRP 20 -2.367 29.775 9.688 1.00 1.00 ATOM 140 CA TRP 20 -2.808 30.977 8.992 1.00 1.00 ATOM 141 CB TRP 20 -2.666 30.779 7.457 1.00 1.00 ATOM 142 CG TRP 20 -2.427 32.087 6.727 1.00 1.00 ATOM 143 CD1 TRP 20 -1.236 32.731 6.542 1.00 1.00 ATOM 144 NE1 TRP 20 -1.452 33.985 6.008 1.00 1.00 ATOM 145 CE2 TRP 20 -2.805 34.169 5.863 1.00 1.00 ATOM 146 CD2 TRP 20 -3.453 32.984 6.272 1.00 1.00 ATOM 147 CE3 TRP 20 -4.840 32.868 6.225 1.00 1.00 ATOM 148 CZ3 TRP 20 -5.576 33.967 5.757 1.00 1.00 ATOM 149 CZ2 TRP 20 -3.534 35.259 5.416 1.00 1.00 ATOM 150 CH2 TRP 20 -4.932 35.150 5.362 1.00 1.00 ATOM 151 C TRP 20 -4.185 31.569 9.337 1.00 1.00 ATOM 152 O TRP 20 -4.316 32.760 9.614 1.00 1.00 ATOM 153 N ALA 21 -5.260 30.759 9.364 1.00 1.00 ATOM 154 CA ALA 21 -6.588 31.227 9.733 1.00 1.00 ATOM 155 CB ALA 21 -7.603 30.094 9.495 1.00 1.00 ATOM 156 C ALA 21 -6.691 31.724 11.180 1.00 1.00 ATOM 157 O ALA 21 -7.295 32.755 11.473 1.00 1.00 ATOM 158 N SER 22 -6.058 31.007 12.130 1.00 1.00 ATOM 159 CA SER 22 -6.017 31.413 13.531 1.00 1.00 ATOM 160 CB SER 22 -5.760 30.223 14.492 1.00 1.00 ATOM 161 OG SER 22 -6.039 30.584 15.851 1.00 1.00 ATOM 162 C SER 22 -5.002 32.525 13.752 1.00 1.00 ATOM 163 O SER 22 -5.233 33.443 14.528 1.00 1.00 ATOM 164 N LEU 23 -3.875 32.523 13.010 1.00 1.00 ATOM 165 CA LEU 23 -2.898 33.608 12.933 1.00 1.00 ATOM 166 CB LEU 23 -1.839 33.255 11.858 1.00 1.00 ATOM 167 CG LEU 23 -0.811 34.330 11.454 1.00 1.00 ATOM 168 CD1 LEU 23 0.062 34.810 12.614 1.00 1.00 ATOM 169 CD2 LEU 23 0.069 33.759 10.334 1.00 1.00 ATOM 170 C LEU 23 -3.539 34.949 12.624 1.00 1.00 ATOM 171 O LEU 23 -3.412 35.901 13.391 1.00 1.00 ATOM 172 N ALA 24 -4.319 35.027 11.529 1.00 1.00 ATOM 173 CA ALA 24 -5.140 36.172 11.207 1.00 1.00 ATOM 174 CB ALA 24 -5.900 35.888 9.895 1.00 1.00 ATOM 175 C ALA 24 -6.111 36.552 12.328 1.00 1.00 ATOM 176 O ALA 24 -6.089 37.669 12.832 1.00 1.00 ATOM 177 N ALA 25 -6.954 35.609 12.795 1.00 1.00 ATOM 178 CA ALA 25 -7.912 35.832 13.866 1.00 1.00 ATOM 179 CB ALA 25 -8.704 34.530 14.101 1.00 1.00 ATOM 180 C ALA 25 -7.324 36.312 15.199 1.00 1.00 ATOM 181 O ALA 25 -7.923 37.111 15.916 1.00 1.00 ATOM 182 N ASN 26 -6.131 35.831 15.584 1.00 1.00 ATOM 183 CA ASN 26 -5.454 36.231 16.805 1.00 1.00 ATOM 184 CB ASN 26 -4.445 35.154 17.275 1.00 1.00 ATOM 185 CG ASN 26 -5.222 33.883 17.592 1.00 1.00 ATOM 186 OD1 ASN 26 -6.412 33.917 17.925 1.00 1.00 ATOM 187 ND2 ASN 26 -4.555 32.717 17.469 1.00 1.00 ATOM 188 C ASN 26 -4.773 37.581 16.658 1.00 1.00 ATOM 189 O ASN 26 -5.034 38.486 17.446 1.00 1.00 ATOM 190 N GLU 27 -3.926 37.780 15.629 1.00 1.00 ATOM 191 CA GLU 27 -3.218 39.035 15.414 1.00 1.00 ATOM 192 CB GLU 27 -2.153 38.881 14.301 1.00 1.00 ATOM 193 CG GLU 27 -1.033 37.846 14.607 1.00 1.00 ATOM 194 CD GLU 27 -0.114 38.230 15.756 1.00 1.00 ATOM 195 OE1 GLU 27 0.425 39.367 15.733 1.00 1.00 ATOM 196 OE2 GLU 27 0.106 37.381 16.663 1.00 1.00 ATOM 197 C GLU 27 -4.150 40.212 15.102 1.00 1.00 ATOM 198 O GLU 27 -3.893 41.352 15.495 1.00 1.00 ATOM 199 N LEU 28 -5.309 39.974 14.444 1.00 1.00 ATOM 200 CA LEU 28 -6.354 40.981 14.295 1.00 1.00 ATOM 201 CB LEU 28 -7.497 40.524 13.354 1.00 1.00 ATOM 202 CG LEU 28 -7.108 40.490 11.859 1.00 1.00 ATOM 203 CD1 LEU 28 -8.199 39.785 11.039 1.00 1.00 ATOM 204 CD2 LEU 28 -6.846 41.891 11.286 1.00 1.00 ATOM 205 C LEU 28 -6.947 41.450 15.624 1.00 1.00 ATOM 206 O LEU 28 -7.116 42.648 15.847 1.00 1.00 ATOM 207 N ARG 29 -7.232 40.524 16.564 1.00 1.00 ATOM 208 CA ARG 29 -7.733 40.849 17.895 1.00 1.00 ATOM 209 CB ARG 29 -8.298 39.587 18.587 1.00 1.00 ATOM 210 CG ARG 29 -9.626 39.148 17.938 1.00 1.00 ATOM 211 CD ARG 29 -10.286 37.928 18.581 1.00 1.00 ATOM 212 NE ARG 29 -9.441 36.738 18.241 1.00 1.00 ATOM 213 CZ ARG 29 -9.814 35.478 18.472 1.00 1.00 ATOM 214 NH1 ARG 29 -10.896 35.188 19.185 1.00 1.00 ATOM 215 NH2 ARG 29 -9.117 34.466 17.978 1.00 1.00 ATOM 216 C ARG 29 -6.704 41.536 18.786 1.00 1.00 ATOM 217 O ARG 29 -7.027 42.245 19.736 1.00 1.00 ATOM 218 N VAL 30 -5.409 41.375 18.471 1.00 1.00 ATOM 219 CA VAL 30 -4.353 42.178 19.059 1.00 1.00 ATOM 220 CB VAL 30 -2.990 41.522 18.890 1.00 1.00 ATOM 221 CG1 VAL 30 -1.895 42.420 19.489 1.00 1.00 ATOM 222 CG2 VAL 30 -2.991 40.165 19.616 1.00 1.00 ATOM 223 C VAL 30 -4.332 43.582 18.469 1.00 1.00 ATOM 224 O VAL 30 -4.353 44.576 19.195 1.00 1.00 ATOM 225 N THR 31 -4.287 43.721 17.124 1.00 1.00 ATOM 226 CA THR 31 -4.160 45.030 16.478 1.00 1.00 ATOM 227 CB THR 31 -3.730 44.995 15.003 1.00 1.00 ATOM 228 OG1 THR 31 -3.268 46.262 14.537 1.00 1.00 ATOM 229 CG2 THR 31 -4.864 44.579 14.065 1.00 1.00 ATOM 230 C THR 31 -5.358 45.946 16.660 1.00 1.00 ATOM 231 O THR 31 -5.159 47.157 16.755 1.00 1.00 ATOM 232 N GLU 32 -6.612 45.421 16.743 1.00 1.00 ATOM 233 CA GLU 32 -7.878 46.136 16.972 1.00 1.00 ATOM 234 CB GLU 32 -8.780 45.367 17.990 1.00 1.00 ATOM 235 CG GLU 32 -9.706 44.224 17.515 1.00 1.00 ATOM 236 CD GLU 32 -10.510 43.750 18.725 1.00 1.00 ATOM 237 OE1 GLU 32 -11.111 44.626 19.407 1.00 1.00 ATOM 238 OE2 GLU 32 -10.503 42.546 19.074 1.00 1.00 ATOM 239 C GLU 32 -7.760 47.553 17.554 1.00 1.00 ATOM 240 O GLU 32 -7.838 48.574 16.868 1.00 1.00 ATOM 241 N ARG 33 -7.552 47.597 18.877 1.00 1.00 ATOM 242 CA ARG 33 -7.659 48.752 19.733 1.00 1.00 ATOM 243 CB ARG 33 -8.239 48.323 21.119 1.00 1.00 ATOM 244 CG ARG 33 -9.298 47.201 21.005 1.00 1.00 ATOM 245 CD ARG 33 -9.980 46.733 22.295 1.00 1.00 ATOM 246 NE ARG 33 -10.738 45.505 21.883 1.00 1.00 ATOM 247 CZ ARG 33 -10.701 44.336 22.526 1.00 1.00 ATOM 248 NH1 ARG 33 -10.421 44.251 23.815 1.00 1.00 ATOM 249 NH2 ARG 33 -10.958 43.229 21.843 1.00 1.00 ATOM 250 C ARG 33 -6.365 49.564 19.872 1.00 1.00 ATOM 251 O ARG 33 -6.399 50.744 19.519 1.00 1.00 ATOM 252 N PRO 34 -5.219 49.073 20.367 1.00 1.00 ATOM 253 CD PRO 34 -4.849 47.648 20.383 1.00 1.00 ATOM 254 CA PRO 34 -4.128 49.915 20.861 1.00 1.00 ATOM 255 CB PRO 34 -3.360 48.917 21.745 1.00 1.00 ATOM 256 CG PRO 34 -3.438 47.602 20.967 1.00 1.00 ATOM 257 C PRO 34 -3.214 50.453 19.769 1.00 1.00 ATOM 258 O PRO 34 -2.018 50.588 20.018 1.00 1.00 ATOM 259 N PHE 35 -3.726 50.761 18.558 1.00 1.00 ATOM 260 CA PHE 35 -2.979 51.269 17.407 1.00 1.00 ATOM 261 CB PHE 35 -2.195 52.584 17.696 1.00 1.00 ATOM 262 CG PHE 35 -3.109 53.646 18.243 1.00 1.00 ATOM 263 CD1 PHE 35 -3.123 53.939 19.617 1.00 1.00 ATOM 264 CE1 PHE 35 -3.980 54.919 20.133 1.00 1.00 ATOM 265 CZ PHE 35 -4.829 55.626 19.270 1.00 1.00 ATOM 266 CD2 PHE 35 -3.960 54.366 17.389 1.00 1.00 ATOM 267 CE2 PHE 35 -4.815 55.353 17.897 1.00 1.00 ATOM 268 C PHE 35 -2.059 50.239 16.750 1.00 1.00 ATOM 269 O PHE 35 -2.082 50.042 15.538 1.00 1.00 ATOM 270 N TRP 36 -1.233 49.570 17.569 1.00 1.00 ATOM 271 CA TRP 36 -0.168 48.640 17.260 1.00 1.00 ATOM 272 CB TRP 36 0.187 47.887 18.562 1.00 1.00 ATOM 273 CG TRP 36 1.468 47.084 18.521 1.00 1.00 ATOM 274 CD1 TRP 36 2.751 47.509 18.699 1.00 1.00 ATOM 275 NE1 TRP 36 3.619 46.440 18.667 1.00 1.00 ATOM 276 CE2 TRP 36 2.888 45.297 18.426 1.00 1.00 ATOM 277 CD2 TRP 36 1.534 45.669 18.297 1.00 1.00 ATOM 278 CE3 TRP 36 0.547 44.730 18.014 1.00 1.00 ATOM 279 CZ3 TRP 36 0.946 43.398 17.845 1.00 1.00 ATOM 280 CZ2 TRP 36 3.271 43.971 18.304 1.00 1.00 ATOM 281 CH2 TRP 36 2.289 43.028 17.994 1.00 1.00 ATOM 282 C TRP 36 -0.373 47.648 16.113 1.00 1.00 ATOM 283 O TRP 36 -1.251 46.790 16.146 1.00 1.00 ATOM 284 N ILE 37 0.462 47.741 15.063 1.00 1.00 ATOM 285 CA ILE 37 0.436 46.847 13.913 1.00 1.00 ATOM 286 CB ILE 37 0.667 47.608 12.602 1.00 1.00 ATOM 287 CG2 ILE 37 0.358 46.669 11.413 1.00 1.00 ATOM 288 CG1 ILE 37 -0.182 48.903 12.528 1.00 1.00 ATOM 289 CD1 ILE 37 0.075 49.737 11.266 1.00 1.00 ATOM 290 C ILE 37 1.518 45.775 14.041 1.00 1.00 ATOM 291 O ILE 37 2.702 46.096 14.127 1.00 1.00 ATOM 292 N SER 38 1.168 44.468 14.024 1.00 1.00 ATOM 293 CA SER 38 2.170 43.409 13.921 1.00 1.00 ATOM 294 CB SER 38 1.779 42.062 14.599 1.00 1.00 ATOM 295 OG SER 38 0.604 41.456 14.066 1.00 1.00 ATOM 296 C SER 38 2.546 43.129 12.478 1.00 1.00 ATOM 297 O SER 38 1.854 43.490 11.526 1.00 1.00 ATOM 298 N SER 39 3.702 42.484 12.250 1.00 1.00 ATOM 299 CA SER 39 4.098 42.086 10.906 1.00 1.00 ATOM 300 CB SER 39 4.769 43.216 10.093 1.00 1.00 ATOM 301 OG SER 39 3.764 44.100 9.610 1.00 1.00 ATOM 302 C SER 39 5.055 40.931 10.971 1.00 1.00 ATOM 303 O SER 39 6.233 41.090 11.275 1.00 1.00 ATOM 304 N PHE 40 4.558 39.716 10.690 1.00 1.00 ATOM 305 CA PHE 40 5.347 38.503 10.713 1.00 1.00 ATOM 306 CB PHE 40 4.404 37.317 11.060 1.00 1.00 ATOM 307 CG PHE 40 5.115 35.994 11.115 1.00 1.00 ATOM 308 CD1 PHE 40 6.226 35.800 11.948 1.00 1.00 ATOM 309 CE1 PHE 40 6.885 34.566 11.971 1.00 1.00 ATOM 310 CZ PHE 40 6.459 33.524 11.142 1.00 1.00 ATOM 311 CD2 PHE 40 4.679 34.936 10.308 1.00 1.00 ATOM 312 CE2 PHE 40 5.356 33.713 10.306 1.00 1.00 ATOM 313 C PHE 40 6.098 38.267 9.395 1.00 1.00 ATOM 314 O PHE 40 5.552 38.461 8.305 1.00 1.00 ATOM 315 N ILE 41 7.376 37.851 9.490 1.00 1.00 ATOM 316 CA ILE 41 8.226 37.436 8.382 1.00 1.00 ATOM 317 CB ILE 41 9.235 38.533 8.006 1.00 1.00 ATOM 318 CG2 ILE 41 10.395 38.052 7.100 1.00 1.00 ATOM 319 CG1 ILE 41 8.536 39.760 7.375 1.00 1.00 ATOM 320 CD1 ILE 41 7.885 39.519 6.007 1.00 1.00 ATOM 321 C ILE 41 8.974 36.183 8.811 1.00 1.00 ATOM 322 O ILE 41 9.345 36.030 9.972 1.00 1.00 ATOM 323 N GLY 42 9.243 35.253 7.870 1.00 1.00 ATOM 324 CA GLY 42 10.114 34.104 8.117 1.00 1.00 ATOM 325 C GLY 42 11.242 34.057 7.124 1.00 1.00 ATOM 326 O GLY 42 11.066 33.561 6.013 1.00 1.00 ATOM 327 N ARG 43 12.432 34.573 7.491 1.00 1.00 ATOM 328 CA ARG 43 13.598 34.586 6.619 1.00 1.00 ATOM 329 CB ARG 43 14.372 35.939 6.658 1.00 1.00 ATOM 330 CG ARG 43 15.140 36.275 7.959 1.00 1.00 ATOM 331 CD ARG 43 16.043 37.517 7.826 1.00 1.00 ATOM 332 NE ARG 43 16.517 37.879 9.207 1.00 1.00 ATOM 333 CZ ARG 43 16.395 39.106 9.729 1.00 1.00 ATOM 334 NH1 ARG 43 16.023 40.136 8.980 1.00 1.00 ATOM 335 NH2 ARG 43 16.608 39.308 11.022 1.00 1.00 ATOM 336 C ARG 43 14.538 33.424 6.914 1.00 1.00 ATOM 337 O ARG 43 14.229 32.504 7.670 1.00 1.00 ATOM 338 N SER 44 15.733 33.432 6.301 1.00 1.00 ATOM 339 CA SER 44 16.772 32.443 6.529 1.00 1.00 ATOM 340 CB SER 44 17.859 32.523 5.442 1.00 1.00 ATOM 341 OG SER 44 17.367 32.080 4.187 1.00 1.00 ATOM 342 C SER 44 17.469 32.620 7.861 1.00 1.00 ATOM 343 O SER 44 17.181 31.911 8.823 1.00 1.00 ATOM 344 N LYS 45 18.421 33.561 7.928 1.00 1.00 ATOM 345 CA LYS 45 19.053 33.997 9.147 1.00 1.00 ATOM 346 CB LYS 45 20.275 33.116 9.524 1.00 1.00 ATOM 347 CG LYS 45 21.509 33.263 8.620 1.00 1.00 ATOM 348 CD LYS 45 22.257 31.945 8.344 1.00 1.00 ATOM 349 CE LYS 45 21.626 31.055 7.259 1.00 1.00 ATOM 350 NZ LYS 45 21.729 31.682 5.935 1.00 1.00 ATOM 351 C LYS 45 19.414 35.447 8.912 1.00 1.00 ATOM 352 O LYS 45 19.052 35.998 7.877 1.00 1.00 TER END