####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS472_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 7 - 26 4.99 8.93 LONGEST_CONTINUOUS_SEGMENT: 20 8 - 27 4.97 9.01 LCS_AVERAGE: 41.79 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.65 15.63 LCS_AVERAGE: 14.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.65 15.63 LCS_AVERAGE: 11.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 12 0 3 3 3 5 5 7 7 10 11 11 14 14 18 19 21 21 24 26 28 LCS_GDT V 3 V 3 3 5 12 1 3 3 4 5 5 6 7 9 9 9 10 14 14 16 21 21 24 26 28 LCS_GDT Q 4 Q 4 3 5 12 1 3 3 4 5 7 9 11 12 14 14 15 17 20 23 28 30 35 38 39 LCS_GDT G 5 G 5 3 5 13 0 3 3 4 6 8 10 12 13 15 17 20 24 26 30 34 35 36 38 39 LCS_GDT P 6 P 6 3 5 17 3 3 4 4 5 6 7 9 11 14 16 19 23 26 30 34 35 36 38 39 LCS_GDT W 7 W 7 3 5 20 3 3 4 4 5 5 6 9 10 13 16 20 23 26 30 34 35 36 38 39 LCS_GDT V 8 V 8 3 4 20 3 3 4 4 5 6 8 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT G 9 G 9 3 5 20 3 3 4 4 5 7 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT S 10 S 10 4 5 20 4 4 4 4 5 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT S 11 S 11 4 5 20 4 4 4 4 5 7 9 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT Y 12 Y 12 4 5 20 4 4 4 4 5 5 6 9 11 13 16 20 23 26 27 30 33 36 38 39 LCS_GDT V 13 V 13 4 5 20 4 4 4 4 5 6 8 11 15 18 22 24 25 27 30 34 35 36 38 39 LCS_GDT A 14 A 14 3 6 20 3 3 6 6 7 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT E 15 E 15 4 6 20 3 4 4 5 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT T 16 T 16 4 6 20 3 4 4 4 5 7 9 11 15 17 21 24 25 27 30 34 35 36 38 39 LCS_GDT G 17 G 17 4 6 20 3 4 4 5 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT Q 18 Q 18 4 6 20 3 4 5 6 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT N 19 N 19 4 6 20 3 3 4 4 6 8 10 12 13 15 20 24 25 27 30 34 35 36 38 39 LCS_GDT W 20 W 20 10 10 20 6 10 10 10 10 10 10 12 15 18 22 24 25 27 30 34 35 36 38 39 LCS_GDT A 21 A 21 10 10 20 6 10 10 10 10 10 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT S 22 S 22 10 10 20 6 10 10 10 10 10 11 13 15 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT L 23 L 23 10 10 20 6 10 10 10 10 10 10 12 15 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT A 24 A 24 10 10 20 6 10 10 10 10 10 10 12 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT A 25 A 25 10 10 20 6 10 10 10 10 10 10 12 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT N 26 N 26 10 10 20 4 10 10 10 10 10 10 12 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT E 27 E 27 10 10 20 4 10 10 10 10 10 10 12 13 14 18 19 24 25 28 31 33 36 37 39 LCS_GDT L 28 L 28 10 10 19 4 10 10 10 10 10 10 12 13 14 16 19 20 21 24 28 29 31 34 35 LCS_GDT R 29 R 29 10 10 19 4 10 10 10 10 10 10 12 13 14 18 22 24 25 29 31 32 34 35 37 LCS_GDT V 30 V 30 3 4 19 3 3 5 6 8 9 9 11 14 19 22 24 25 27 29 33 35 36 38 39 LCS_GDT T 31 T 31 3 4 19 3 3 5 5 5 6 7 11 15 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT E 32 E 32 4 7 19 3 4 5 5 6 7 8 11 15 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT R 33 R 33 4 7 19 2 4 5 5 8 9 9 11 12 14 19 22 25 27 30 34 35 36 38 39 LCS_GDT P 34 P 34 4 7 19 3 4 5 6 8 9 9 11 12 14 16 19 20 25 29 34 35 36 38 39 LCS_GDT F 35 F 35 4 7 19 3 4 5 5 8 9 9 10 12 14 16 20 22 25 29 34 35 36 38 39 LCS_GDT W 36 W 36 4 7 19 3 3 5 6 8 9 9 11 12 14 16 20 24 27 29 34 35 36 38 39 LCS_GDT I 37 I 37 4 7 19 3 3 4 6 8 9 9 11 12 14 17 22 24 27 30 34 35 36 38 39 LCS_GDT S 38 S 38 4 7 19 0 3 4 6 8 9 9 12 16 19 21 24 25 27 30 34 35 36 38 39 LCS_GDT S 39 S 39 3 4 19 2 3 6 6 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT F 40 F 40 3 4 19 3 3 6 6 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT I 41 I 41 4 5 19 3 4 6 6 8 8 11 13 16 19 22 24 25 27 30 34 35 36 38 39 LCS_GDT G 42 G 42 4 5 19 3 4 4 5 6 8 9 11 12 15 18 22 24 27 30 34 35 36 38 39 LCS_GDT R 43 R 43 4 5 16 3 4 4 5 5 6 7 9 10 14 18 21 23 25 29 34 35 36 38 39 LCS_GDT S 44 S 44 4 5 11 3 4 4 5 5 6 7 9 10 14 16 19 22 25 29 33 35 36 38 39 LCS_GDT K 45 K 45 3 5 11 1 3 4 5 5 6 7 9 11 14 16 18 18 21 26 29 31 35 38 39 LCS_AVERAGE LCS_A: 22.62 ( 11.47 14.62 41.79 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 10 10 10 10 11 13 16 19 22 24 25 27 30 34 35 36 38 39 GDT PERCENT_AT 13.64 22.73 22.73 22.73 22.73 22.73 25.00 29.55 36.36 43.18 50.00 54.55 56.82 61.36 68.18 77.27 79.55 81.82 86.36 88.64 GDT RMS_LOCAL 0.20 0.65 0.65 0.65 0.65 0.65 2.83 3.09 3.59 3.86 4.09 4.30 4.59 4.80 5.53 5.95 6.00 6.11 6.52 6.65 GDT RMS_ALL_AT 15.58 15.63 15.63 15.63 15.63 15.63 9.06 8.92 9.02 9.00 8.93 8.99 8.89 8.91 8.16 8.10 8.11 8.13 7.93 7.90 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.066 0 0.038 0.038 20.066 0.000 0.000 - LGA V 3 V 3 19.354 0 0.571 0.564 21.492 0.000 0.000 19.473 LGA Q 4 Q 4 16.610 0 0.370 1.318 20.269 0.000 0.000 20.269 LGA G 5 G 5 10.914 0 0.357 0.357 13.685 0.000 0.000 - LGA P 6 P 6 10.779 0 0.238 0.230 11.634 0.000 0.000 11.228 LGA W 7 W 7 9.603 0 0.530 1.381 17.511 0.000 0.000 16.925 LGA V 8 V 8 4.226 0 0.639 0.968 6.148 12.727 9.610 3.871 LGA G 9 G 9 3.925 0 0.551 0.551 5.506 8.636 8.636 - LGA S 10 S 10 3.593 0 0.489 0.843 5.049 18.636 13.333 5.049 LGA S 11 S 11 3.834 0 0.063 0.092 6.594 9.545 8.182 5.286 LGA Y 12 Y 12 7.344 0 0.112 1.018 18.627 0.000 0.000 18.627 LGA V 13 V 13 5.117 0 0.557 0.552 5.852 0.455 1.039 4.255 LGA A 14 A 14 2.790 0 0.454 0.433 3.893 36.818 31.636 - LGA E 15 E 15 3.418 0 0.615 1.159 7.517 12.727 6.869 7.517 LGA T 16 T 16 4.726 0 0.461 0.958 9.258 12.273 7.013 7.399 LGA G 17 G 17 3.291 0 0.342 0.342 3.291 23.182 23.182 - LGA Q 18 Q 18 2.675 0 0.639 1.521 4.932 19.545 15.758 4.305 LGA N 19 N 19 6.397 0 0.234 1.195 10.922 0.455 0.227 10.922 LGA W 20 W 20 5.341 0 0.590 1.203 11.801 9.091 2.597 9.052 LGA A 21 A 21 1.941 0 0.058 0.064 4.617 48.182 38.909 - LGA S 22 S 22 2.374 0 0.023 0.632 5.071 41.818 28.182 5.071 LGA L 23 L 23 5.268 0 0.116 1.353 11.766 4.545 2.273 11.766 LGA A 24 A 24 6.442 0 0.024 0.029 8.750 0.000 0.000 - LGA A 25 A 25 6.211 0 0.149 0.150 8.350 0.000 0.000 - LGA N 26 N 26 6.310 0 0.088 0.517 10.046 0.000 6.136 2.502 LGA E 27 E 27 12.070 0 0.048 0.211 15.008 0.000 0.000 12.273 LGA L 28 L 28 13.932 0 0.195 0.181 15.944 0.000 0.000 13.230 LGA R 29 R 29 12.418 0 0.298 1.507 15.547 0.000 0.000 15.547 LGA V 30 V 30 8.221 0 0.603 0.551 9.608 0.000 0.000 6.447 LGA T 31 T 31 8.975 0 0.054 1.169 12.537 0.000 0.000 11.085 LGA E 32 E 32 7.799 0 0.630 1.139 11.996 0.000 0.000 9.639 LGA R 33 R 33 8.226 0 0.556 1.193 10.822 0.000 0.000 10.417 LGA P 34 P 34 10.693 0 0.655 0.648 11.138 0.000 0.000 9.945 LGA F 35 F 35 10.357 0 0.617 1.266 19.371 0.000 0.000 19.371 LGA W 36 W 36 8.994 0 0.067 1.218 12.079 0.000 0.000 12.079 LGA I 37 I 37 8.654 0 0.642 1.464 13.329 0.000 0.000 13.329 LGA S 38 S 38 5.180 0 0.638 0.564 6.063 5.909 3.939 5.623 LGA S 39 S 39 2.390 0 0.729 0.907 6.118 42.273 28.485 6.118 LGA F 40 F 40 1.869 0 0.620 0.929 7.000 30.455 23.140 7.000 LGA I 41 I 41 2.657 0 0.032 0.628 4.504 22.727 30.682 1.856 LGA G 42 G 42 6.193 0 0.533 0.533 9.451 0.455 0.455 - LGA R 43 R 43 9.409 0 0.131 1.126 16.140 0.000 0.000 16.140 LGA S 44 S 44 11.575 0 0.499 0.618 13.016 0.000 0.000 12.047 LGA K 45 K 45 15.632 0 0.126 0.759 21.694 0.000 0.000 21.631 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.755 7.631 9.442 8.192 6.597 2.857 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.09 38.068 30.499 0.408 LGA_LOCAL RMSD: 3.088 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.924 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.755 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.332112 * X + 0.874141 * Y + -0.354372 * Z + 32.268322 Y_new = -0.941629 * X + -0.285305 * Y + 0.178708 * Z + 34.422138 Z_new = 0.055112 * X + 0.393038 * Y + 0.917869 * Z + -48.832870 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.909874 -0.055140 0.404584 [DEG: -109.4277 -3.1593 23.1809 ] ZXZ: -2.037875 0.408118 0.139313 [DEG: -116.7616 23.3835 7.9820 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS472_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.09 30.499 7.75 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS472_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 3.280 39.009 -4.060 1.00 1.00 ATOM 10 CA ALA 2 2.619 38.083 -4.938 1.00 1.00 ATOM 11 CB ALA 2 2.516 36.715 -4.239 1.00 1.00 ATOM 12 C ALA 2 1.232 38.604 -5.262 1.00 1.00 ATOM 13 O ALA 2 0.723 39.490 -4.574 1.00 1.00 ATOM 14 N VAL 3 0.605 38.046 -6.307 1.00 1.00 ATOM 15 CA VAL 3 -0.811 38.140 -6.612 1.00 1.00 ATOM 16 CB VAL 3 -1.092 37.820 -8.078 1.00 1.00 ATOM 17 CG1 VAL 3 -2.600 37.934 -8.378 1.00 1.00 ATOM 18 CG2 VAL 3 -0.297 38.796 -8.970 1.00 1.00 ATOM 19 C VAL 3 -1.534 37.166 -5.698 1.00 1.00 ATOM 20 O VAL 3 -2.512 37.504 -5.030 1.00 1.00 ATOM 21 N GLN 4 -0.992 35.937 -5.554 1.00 1.00 ATOM 22 CA GLN 4 -1.315 35.049 -4.451 1.00 1.00 ATOM 23 CB GLN 4 -0.896 33.591 -4.772 1.00 1.00 ATOM 24 CG GLN 4 -1.451 32.549 -3.767 1.00 1.00 ATOM 25 CD GLN 4 -0.836 31.163 -3.962 1.00 1.00 ATOM 26 OE1 GLN 4 -1.483 30.226 -4.430 1.00 1.00 ATOM 27 NE2 GLN 4 0.445 31.015 -3.559 1.00 1.00 ATOM 28 C GLN 4 -0.619 35.531 -3.172 1.00 1.00 ATOM 29 O GLN 4 0.302 34.913 -2.640 1.00 1.00 ATOM 30 N GLY 5 -1.037 36.702 -2.657 1.00 1.00 ATOM 31 CA GLY 5 -0.377 37.399 -1.561 1.00 1.00 ATOM 32 C GLY 5 -1.186 37.409 -0.291 1.00 1.00 ATOM 33 O GLY 5 -1.896 38.388 -0.066 1.00 1.00 ATOM 34 N PRO 6 -1.129 36.417 0.594 1.00 1.00 ATOM 35 CD PRO 6 -0.261 35.245 0.450 1.00 1.00 ATOM 36 CA PRO 6 -2.014 36.307 1.760 1.00 1.00 ATOM 37 CB PRO 6 -1.843 34.829 2.162 1.00 1.00 ATOM 38 CG PRO 6 -0.401 34.505 1.771 1.00 1.00 ATOM 39 C PRO 6 -1.640 37.237 2.912 1.00 1.00 ATOM 40 O PRO 6 -1.853 36.872 4.065 1.00 1.00 ATOM 41 N TRP 7 -1.113 38.449 2.632 1.00 1.00 ATOM 42 CA TRP 7 -0.695 39.456 3.596 1.00 1.00 ATOM 43 CB TRP 7 -1.907 39.949 4.445 1.00 1.00 ATOM 44 CG TRP 7 -1.593 40.974 5.515 1.00 1.00 ATOM 45 CD1 TRP 7 -1.434 42.329 5.428 1.00 1.00 ATOM 46 NE1 TRP 7 -1.059 42.837 6.653 1.00 1.00 ATOM 47 CE2 TRP 7 -0.952 41.797 7.546 1.00 1.00 ATOM 48 CD2 TRP 7 -1.310 40.612 6.875 1.00 1.00 ATOM 49 CE3 TRP 7 -1.327 39.387 7.534 1.00 1.00 ATOM 50 CZ3 TRP 7 -0.933 39.359 8.876 1.00 1.00 ATOM 51 CZ2 TRP 7 -0.563 41.766 8.876 1.00 1.00 ATOM 52 CH2 TRP 7 -0.536 40.527 9.535 1.00 1.00 ATOM 53 C TRP 7 0.554 39.071 4.407 1.00 1.00 ATOM 54 O TRP 7 1.595 39.721 4.311 1.00 1.00 ATOM 55 N VAL 8 0.485 37.995 5.207 1.00 1.00 ATOM 56 CA VAL 8 1.573 37.490 6.027 1.00 1.00 ATOM 57 CB VAL 8 1.050 36.691 7.228 1.00 1.00 ATOM 58 CG1 VAL 8 0.031 35.622 6.788 1.00 1.00 ATOM 59 CG2 VAL 8 2.185 36.073 8.072 1.00 1.00 ATOM 60 C VAL 8 2.559 36.682 5.192 1.00 1.00 ATOM 61 O VAL 8 2.189 35.930 4.293 1.00 1.00 ATOM 62 N GLY 9 3.872 36.846 5.459 1.00 1.00 ATOM 63 CA GLY 9 4.921 36.124 4.747 1.00 1.00 ATOM 64 C GLY 9 5.746 35.277 5.668 1.00 1.00 ATOM 65 O GLY 9 6.545 35.801 6.444 1.00 1.00 ATOM 66 N SER 10 5.616 33.937 5.599 1.00 1.00 ATOM 67 CA SER 10 6.452 33.041 6.398 1.00 1.00 ATOM 68 CB SER 10 5.711 31.904 7.145 1.00 1.00 ATOM 69 OG SER 10 6.481 31.442 8.265 1.00 1.00 ATOM 70 C SER 10 7.588 32.500 5.557 1.00 1.00 ATOM 71 O SER 10 7.598 31.387 5.038 1.00 1.00 ATOM 72 N SER 11 8.628 33.335 5.423 1.00 1.00 ATOM 73 CA SER 11 9.894 33.025 4.781 1.00 1.00 ATOM 74 CB SER 11 10.668 34.358 4.560 1.00 1.00 ATOM 75 OG SER 11 12.003 34.201 4.081 1.00 1.00 ATOM 76 C SER 11 10.682 32.020 5.623 1.00 1.00 ATOM 77 O SER 11 11.425 31.172 5.132 1.00 1.00 ATOM 78 N TYR 12 10.513 32.041 6.953 1.00 1.00 ATOM 79 CA TYR 12 11.159 31.089 7.826 1.00 1.00 ATOM 80 CB TYR 12 11.401 31.702 9.220 1.00 1.00 ATOM 81 CG TYR 12 12.577 31.016 9.850 1.00 1.00 ATOM 82 CD1 TYR 12 13.873 31.375 9.458 1.00 1.00 ATOM 83 CE1 TYR 12 14.988 30.757 10.034 1.00 1.00 ATOM 84 CZ TYR 12 14.805 29.766 11.000 1.00 1.00 ATOM 85 OH TYR 12 15.925 29.221 11.640 1.00 1.00 ATOM 86 CD2 TYR 12 12.404 29.984 10.783 1.00 1.00 ATOM 87 CE2 TYR 12 13.517 29.363 11.369 1.00 1.00 ATOM 88 C TYR 12 10.425 29.757 7.973 1.00 1.00 ATOM 89 O TYR 12 11.024 28.706 7.740 1.00 1.00 ATOM 90 N VAL 13 9.149 29.781 8.412 1.00 1.00 ATOM 91 CA VAL 13 8.402 28.632 8.917 1.00 1.00 ATOM 92 CB VAL 13 8.051 27.581 7.864 1.00 1.00 ATOM 93 CG1 VAL 13 7.101 26.518 8.456 1.00 1.00 ATOM 94 CG2 VAL 13 7.367 28.273 6.670 1.00 1.00 ATOM 95 C VAL 13 9.007 28.005 10.178 1.00 1.00 ATOM 96 O VAL 13 9.951 27.217 10.137 1.00 1.00 ATOM 97 N ALA 14 8.464 28.360 11.359 1.00 1.00 ATOM 98 CA ALA 14 8.831 27.733 12.620 1.00 1.00 ATOM 99 CB ALA 14 10.166 28.282 13.169 1.00 1.00 ATOM 100 C ALA 14 7.723 27.967 13.635 1.00 1.00 ATOM 101 O ALA 14 7.933 28.485 14.731 1.00 1.00 ATOM 102 N GLU 15 6.483 27.614 13.266 1.00 1.00 ATOM 103 CA GLU 15 5.313 28.069 13.978 1.00 1.00 ATOM 104 CB GLU 15 4.761 29.327 13.279 1.00 1.00 ATOM 105 CG GLU 15 4.409 29.136 11.783 1.00 1.00 ATOM 106 CD GLU 15 4.056 30.464 11.136 1.00 1.00 ATOM 107 OE1 GLU 15 4.811 30.903 10.232 1.00 1.00 ATOM 108 OE2 GLU 15 3.033 31.060 11.562 1.00 1.00 ATOM 109 C GLU 15 4.261 26.978 14.098 1.00 1.00 ATOM 110 O GLU 15 4.060 26.155 13.206 1.00 1.00 ATOM 111 N THR 16 3.564 26.910 15.249 1.00 1.00 ATOM 112 CA THR 16 2.702 25.768 15.562 1.00 1.00 ATOM 113 CB THR 16 2.680 25.353 17.035 1.00 1.00 ATOM 114 OG1 THR 16 3.998 25.169 17.521 1.00 1.00 ATOM 115 CG2 THR 16 2.001 23.985 17.220 1.00 1.00 ATOM 116 C THR 16 1.273 25.986 15.112 1.00 1.00 ATOM 117 O THR 16 0.383 26.275 15.910 1.00 1.00 ATOM 118 N GLY 17 1.001 25.826 13.799 1.00 1.00 ATOM 119 CA GLY 17 -0.343 25.631 13.240 1.00 1.00 ATOM 120 C GLY 17 -1.286 26.811 13.233 1.00 1.00 ATOM 121 O GLY 17 -1.657 27.323 12.184 1.00 1.00 ATOM 122 N GLN 18 -1.724 27.262 14.423 1.00 1.00 ATOM 123 CA GLN 18 -2.675 28.346 14.610 1.00 1.00 ATOM 124 CB GLN 18 -3.091 28.437 16.109 1.00 1.00 ATOM 125 CG GLN 18 -4.088 29.583 16.442 1.00 1.00 ATOM 126 CD GLN 18 -4.465 29.642 17.924 1.00 1.00 ATOM 127 OE1 GLN 18 -3.957 28.898 18.764 1.00 1.00 ATOM 128 NE2 GLN 18 -5.377 30.575 18.281 1.00 1.00 ATOM 129 C GLN 18 -2.111 29.687 14.170 1.00 1.00 ATOM 130 O GLN 18 -2.832 30.539 13.657 1.00 1.00 ATOM 131 N ASN 19 -0.794 29.881 14.384 1.00 1.00 ATOM 132 CA ASN 19 -0.060 31.129 14.289 1.00 1.00 ATOM 133 CB ASN 19 1.445 30.822 14.452 1.00 1.00 ATOM 134 CG ASN 19 2.223 32.090 14.776 1.00 1.00 ATOM 135 OD1 ASN 19 2.145 32.594 15.898 1.00 1.00 ATOM 136 ND2 ASN 19 2.962 32.630 13.788 1.00 1.00 ATOM 137 C ASN 19 -0.365 31.995 13.058 1.00 1.00 ATOM 138 O ASN 19 -1.133 32.945 13.166 1.00 1.00 ATOM 139 N TRP 20 0.202 31.678 11.876 1.00 1.00 ATOM 140 CA TRP 20 -0.072 32.263 10.567 1.00 1.00 ATOM 141 CB TRP 20 0.398 31.224 9.514 1.00 1.00 ATOM 142 CG TRP 20 0.663 31.753 8.121 1.00 1.00 ATOM 143 CD1 TRP 20 1.809 32.322 7.639 1.00 1.00 ATOM 144 NE1 TRP 20 1.671 32.604 6.296 1.00 1.00 ATOM 145 CE2 TRP 20 0.411 32.217 5.898 1.00 1.00 ATOM 146 CD2 TRP 20 -0.255 31.679 7.018 1.00 1.00 ATOM 147 CE3 TRP 20 -1.558 31.193 6.919 1.00 1.00 ATOM 148 CZ3 TRP 20 -2.191 31.264 5.668 1.00 1.00 ATOM 149 CZ2 TRP 20 -0.214 32.284 4.665 1.00 1.00 ATOM 150 CH2 TRP 20 -1.527 31.801 4.554 1.00 1.00 ATOM 151 C TRP 20 -1.523 32.677 10.275 1.00 1.00 ATOM 152 O TRP 20 -1.820 33.810 9.897 1.00 1.00 ATOM 153 N ALA 21 -2.480 31.750 10.480 1.00 1.00 ATOM 154 CA ALA 21 -3.891 31.970 10.245 1.00 1.00 ATOM 155 CB ALA 21 -4.611 30.608 10.288 1.00 1.00 ATOM 156 C ALA 21 -4.528 32.936 11.243 1.00 1.00 ATOM 157 O ALA 21 -5.280 33.836 10.876 1.00 1.00 ATOM 158 N SER 22 -4.214 32.781 12.543 1.00 1.00 ATOM 159 CA SER 22 -4.656 33.670 13.615 1.00 1.00 ATOM 160 CB SER 22 -4.274 33.087 14.998 1.00 1.00 ATOM 161 OG SER 22 -4.720 33.883 16.095 1.00 1.00 ATOM 162 C SER 22 -4.081 35.065 13.470 1.00 1.00 ATOM 163 O SER 22 -4.784 36.056 13.618 1.00 1.00 ATOM 164 N LEU 23 -2.791 35.173 13.109 1.00 1.00 ATOM 165 CA LEU 23 -2.092 36.403 12.780 1.00 1.00 ATOM 166 CB LEU 23 -0.654 36.016 12.369 1.00 1.00 ATOM 167 CG LEU 23 0.339 37.153 12.077 1.00 1.00 ATOM 168 CD1 LEU 23 0.335 38.283 13.120 1.00 1.00 ATOM 169 CD2 LEU 23 1.738 36.534 11.962 1.00 1.00 ATOM 170 C LEU 23 -2.778 37.207 11.682 1.00 1.00 ATOM 171 O LEU 23 -3.150 38.362 11.873 1.00 1.00 ATOM 172 N ALA 24 -3.042 36.582 10.517 1.00 1.00 ATOM 173 CA ALA 24 -3.819 37.183 9.447 1.00 1.00 ATOM 174 CB ALA 24 -3.859 36.200 8.261 1.00 1.00 ATOM 175 C ALA 24 -5.239 37.584 9.858 1.00 1.00 ATOM 176 O ALA 24 -5.749 38.643 9.498 1.00 1.00 ATOM 177 N ALA 25 -5.911 36.743 10.664 1.00 1.00 ATOM 178 CA ALA 25 -7.234 37.019 11.173 1.00 1.00 ATOM 179 CB ALA 25 -7.848 35.698 11.678 1.00 1.00 ATOM 180 C ALA 25 -7.300 38.083 12.276 1.00 1.00 ATOM 181 O ALA 25 -8.372 38.639 12.520 1.00 1.00 ATOM 182 N ASN 26 -6.188 38.379 12.982 1.00 1.00 ATOM 183 CA ASN 26 -6.098 39.362 14.056 1.00 1.00 ATOM 184 CB ASN 26 -4.802 39.209 14.905 1.00 1.00 ATOM 185 CG ASN 26 -5.135 38.407 16.149 1.00 1.00 ATOM 186 OD1 ASN 26 -6.075 38.746 16.881 1.00 1.00 ATOM 187 ND2 ASN 26 -4.390 37.316 16.405 1.00 1.00 ATOM 188 C ASN 26 -6.173 40.786 13.566 1.00 1.00 ATOM 189 O ASN 26 -7.038 41.549 13.989 1.00 1.00 ATOM 190 N GLU 27 -5.276 41.188 12.660 1.00 1.00 ATOM 191 CA GLU 27 -5.115 42.562 12.224 1.00 1.00 ATOM 192 CB GLU 27 -3.948 42.637 11.228 1.00 1.00 ATOM 193 CG GLU 27 -2.679 41.909 11.735 1.00 1.00 ATOM 194 CD GLU 27 -2.181 42.373 13.090 1.00 1.00 ATOM 195 OE1 GLU 27 -2.211 41.564 14.050 1.00 1.00 ATOM 196 OE2 GLU 27 -1.716 43.540 13.173 1.00 1.00 ATOM 197 C GLU 27 -6.365 43.189 11.620 1.00 1.00 ATOM 198 O GLU 27 -6.643 44.373 11.798 1.00 1.00 ATOM 199 N LEU 28 -7.199 42.365 10.958 1.00 1.00 ATOM 200 CA LEU 28 -8.526 42.703 10.471 1.00 1.00 ATOM 201 CB LEU 28 -9.153 41.464 9.781 1.00 1.00 ATOM 202 CG LEU 28 -8.343 40.900 8.595 1.00 1.00 ATOM 203 CD1 LEU 28 -8.990 39.603 8.087 1.00 1.00 ATOM 204 CD2 LEU 28 -8.206 41.909 7.445 1.00 1.00 ATOM 205 C LEU 28 -9.495 43.187 11.553 1.00 1.00 ATOM 206 O LEU 28 -10.361 44.021 11.305 1.00 1.00 ATOM 207 N ARG 29 -9.355 42.684 12.796 1.00 1.00 ATOM 208 CA ARG 29 -10.161 43.067 13.946 1.00 1.00 ATOM 209 CB ARG 29 -10.003 42.034 15.102 1.00 1.00 ATOM 210 CG ARG 29 -10.141 40.554 14.683 1.00 1.00 ATOM 211 CD ARG 29 -9.658 39.573 15.762 1.00 1.00 ATOM 212 NE ARG 29 -9.430 38.261 15.073 1.00 1.00 ATOM 213 CZ ARG 29 -8.882 37.194 15.667 1.00 1.00 ATOM 214 NH1 ARG 29 -8.429 37.254 16.904 1.00 1.00 ATOM 215 NH2 ARG 29 -8.693 36.075 14.979 1.00 1.00 ATOM 216 C ARG 29 -9.725 44.421 14.492 1.00 1.00 ATOM 217 O ARG 29 -10.511 45.162 15.073 1.00 1.00 ATOM 218 N VAL 30 -8.425 44.737 14.331 1.00 1.00 ATOM 219 CA VAL 30 -7.782 45.918 14.875 1.00 1.00 ATOM 220 CB VAL 30 -6.319 45.641 15.229 1.00 1.00 ATOM 221 CG1 VAL 30 -5.676 46.871 15.907 1.00 1.00 ATOM 222 CG2 VAL 30 -6.246 44.434 16.185 1.00 1.00 ATOM 223 C VAL 30 -7.861 47.103 13.927 1.00 1.00 ATOM 224 O VAL 30 -8.313 48.175 14.317 1.00 1.00 ATOM 225 N THR 31 -7.405 46.954 12.659 1.00 1.00 ATOM 226 CA THR 31 -7.114 48.030 11.693 1.00 1.00 ATOM 227 CB THR 31 -6.538 47.488 10.376 1.00 1.00 ATOM 228 OG1 THR 31 -6.012 48.510 9.533 1.00 1.00 ATOM 229 CG2 THR 31 -7.595 46.723 9.565 1.00 1.00 ATOM 230 C THR 31 -8.239 49.016 11.390 1.00 1.00 ATOM 231 O THR 31 -7.996 50.153 10.979 1.00 1.00 ATOM 232 N GLU 32 -9.506 48.629 11.623 1.00 1.00 ATOM 233 CA GLU 32 -10.661 49.495 11.502 1.00 1.00 ATOM 234 CB GLU 32 -11.972 48.663 11.470 1.00 1.00 ATOM 235 CG GLU 32 -12.150 47.558 12.549 1.00 1.00 ATOM 236 CD GLU 32 -12.717 48.053 13.861 1.00 1.00 ATOM 237 OE1 GLU 32 -13.904 48.477 13.893 1.00 1.00 ATOM 238 OE2 GLU 32 -11.998 48.012 14.886 1.00 1.00 ATOM 239 C GLU 32 -10.667 50.649 12.509 1.00 1.00 ATOM 240 O GLU 32 -11.032 51.774 12.178 1.00 1.00 ATOM 241 N ARG 33 -10.185 50.435 13.747 1.00 1.00 ATOM 242 CA ARG 33 -10.043 51.490 14.739 1.00 1.00 ATOM 243 CB ARG 33 -10.015 50.878 16.166 1.00 1.00 ATOM 244 CG ARG 33 -11.409 50.809 16.809 1.00 1.00 ATOM 245 CD ARG 33 -11.513 49.877 18.017 1.00 1.00 ATOM 246 NE ARG 33 -11.514 48.497 17.450 1.00 1.00 ATOM 247 CZ ARG 33 -12.250 47.502 17.946 1.00 1.00 ATOM 248 NH1 ARG 33 -12.642 47.468 19.206 1.00 1.00 ATOM 249 NH2 ARG 33 -12.646 46.552 17.115 1.00 1.00 ATOM 250 C ARG 33 -8.882 52.478 14.507 1.00 1.00 ATOM 251 O ARG 33 -9.162 53.632 14.178 1.00 1.00 ATOM 252 N PRO 34 -7.586 52.192 14.667 1.00 1.00 ATOM 253 CD PRO 34 -7.022 50.846 14.761 1.00 1.00 ATOM 254 CA PRO 34 -6.548 53.218 14.724 1.00 1.00 ATOM 255 CB PRO 34 -5.402 52.463 15.423 1.00 1.00 ATOM 256 CG PRO 34 -5.510 51.042 14.869 1.00 1.00 ATOM 257 C PRO 34 -6.084 53.709 13.358 1.00 1.00 ATOM 258 O PRO 34 -5.058 54.386 13.313 1.00 1.00 ATOM 259 N PHE 35 -6.754 53.360 12.238 1.00 1.00 ATOM 260 CA PHE 35 -6.352 53.680 10.864 1.00 1.00 ATOM 261 CB PHE 35 -6.289 55.204 10.555 1.00 1.00 ATOM 262 CG PHE 35 -7.678 55.774 10.433 1.00 1.00 ATOM 263 CD1 PHE 35 -8.417 56.146 11.569 1.00 1.00 ATOM 264 CE1 PHE 35 -9.709 56.675 11.439 1.00 1.00 ATOM 265 CZ PHE 35 -10.271 56.847 10.168 1.00 1.00 ATOM 266 CD2 PHE 35 -8.261 55.936 9.165 1.00 1.00 ATOM 267 CE2 PHE 35 -9.547 56.476 9.029 1.00 1.00 ATOM 268 C PHE 35 -5.106 52.948 10.365 1.00 1.00 ATOM 269 O PHE 35 -5.049 52.492 9.224 1.00 1.00 ATOM 270 N TRP 36 -4.091 52.792 11.224 1.00 1.00 ATOM 271 CA TRP 36 -2.896 51.982 11.075 1.00 1.00 ATOM 272 CB TRP 36 -2.306 51.836 12.506 1.00 1.00 ATOM 273 CG TRP 36 -1.147 50.886 12.731 1.00 1.00 ATOM 274 CD1 TRP 36 0.193 51.135 12.682 1.00 1.00 ATOM 275 NE1 TRP 36 0.896 50.015 13.055 1.00 1.00 ATOM 276 CE2 TRP 36 0.006 49.019 13.379 1.00 1.00 ATOM 277 CD2 TRP 36 -1.294 49.521 13.169 1.00 1.00 ATOM 278 CE3 TRP 36 -2.420 48.731 13.404 1.00 1.00 ATOM 279 CZ3 TRP 36 -2.219 47.413 13.841 1.00 1.00 ATOM 280 CZ2 TRP 36 0.203 47.725 13.842 1.00 1.00 ATOM 281 CH2 TRP 36 -0.926 46.918 14.064 1.00 1.00 ATOM 282 C TRP 36 -3.103 50.612 10.409 1.00 1.00 ATOM 283 O TRP 36 -3.991 49.839 10.770 1.00 1.00 ATOM 284 N ILE 37 -2.284 50.300 9.386 1.00 1.00 ATOM 285 CA ILE 37 -2.295 49.006 8.715 1.00 1.00 ATOM 286 CB ILE 37 -2.484 49.091 7.197 1.00 1.00 ATOM 287 CG2 ILE 37 -2.649 47.660 6.630 1.00 1.00 ATOM 288 CG1 ILE 37 -3.701 49.969 6.828 1.00 1.00 ATOM 289 CD1 ILE 37 -3.911 50.119 5.313 1.00 1.00 ATOM 290 C ILE 37 -0.971 48.326 8.997 1.00 1.00 ATOM 291 O ILE 37 0.095 48.896 8.776 1.00 1.00 ATOM 292 N SER 38 -0.989 47.086 9.498 1.00 1.00 ATOM 293 CA SER 38 0.203 46.300 9.749 1.00 1.00 ATOM 294 CB SER 38 -0.020 45.377 10.969 1.00 1.00 ATOM 295 OG SER 38 -1.304 44.762 10.887 1.00 1.00 ATOM 296 C SER 38 0.615 45.447 8.562 1.00 1.00 ATOM 297 O SER 38 -0.038 45.373 7.521 1.00 1.00 ATOM 298 N SER 39 1.766 44.774 8.681 1.00 1.00 ATOM 299 CA SER 39 2.176 43.689 7.808 1.00 1.00 ATOM 300 CB SER 39 2.937 44.145 6.546 1.00 1.00 ATOM 301 OG SER 39 2.014 44.719 5.626 1.00 1.00 ATOM 302 C SER 39 3.047 42.808 8.654 1.00 1.00 ATOM 303 O SER 39 3.640 43.290 9.616 1.00 1.00 ATOM 304 N PHE 40 3.134 41.496 8.374 1.00 1.00 ATOM 305 CA PHE 40 3.929 40.622 9.218 1.00 1.00 ATOM 306 CB PHE 40 3.038 39.824 10.204 1.00 1.00 ATOM 307 CG PHE 40 3.780 39.571 11.491 1.00 1.00 ATOM 308 CD1 PHE 40 3.456 40.310 12.639 1.00 1.00 ATOM 309 CE1 PHE 40 4.152 40.110 13.837 1.00 1.00 ATOM 310 CZ PHE 40 5.191 39.175 13.894 1.00 1.00 ATOM 311 CD2 PHE 40 4.813 38.621 11.565 1.00 1.00 ATOM 312 CE2 PHE 40 5.521 38.429 12.756 1.00 1.00 ATOM 313 C PHE 40 4.799 39.692 8.395 1.00 1.00 ATOM 314 O PHE 40 4.329 38.924 7.555 1.00 1.00 ATOM 315 N ILE 41 6.117 39.753 8.638 1.00 1.00 ATOM 316 CA ILE 41 7.100 38.904 8.002 1.00 1.00 ATOM 317 CB ILE 41 8.168 39.716 7.273 1.00 1.00 ATOM 318 CG2 ILE 41 9.190 38.784 6.588 1.00 1.00 ATOM 319 CG1 ILE 41 7.551 40.703 6.252 1.00 1.00 ATOM 320 CD1 ILE 41 6.703 40.044 5.157 1.00 1.00 ATOM 321 C ILE 41 7.750 38.031 9.059 1.00 1.00 ATOM 322 O ILE 41 8.241 38.501 10.086 1.00 1.00 ATOM 323 N GLY 42 7.787 36.708 8.828 1.00 1.00 ATOM 324 CA GLY 42 8.578 35.782 9.624 1.00 1.00 ATOM 325 C GLY 42 9.709 35.296 8.786 1.00 1.00 ATOM 326 O GLY 42 9.519 34.420 7.952 1.00 1.00 ATOM 327 N ARG 43 10.917 35.860 8.949 1.00 1.00 ATOM 328 CA ARG 43 12.034 35.566 8.073 1.00 1.00 ATOM 329 CB ARG 43 12.432 36.795 7.208 1.00 1.00 ATOM 330 CG ARG 43 13.124 37.958 7.952 1.00 1.00 ATOM 331 CD ARG 43 13.683 39.011 6.991 1.00 1.00 ATOM 332 NE ARG 43 14.487 39.991 7.784 1.00 1.00 ATOM 333 CZ ARG 43 14.920 41.152 7.281 1.00 1.00 ATOM 334 NH1 ARG 43 14.880 41.395 5.980 1.00 1.00 ATOM 335 NH2 ARG 43 15.420 42.087 8.069 1.00 1.00 ATOM 336 C ARG 43 13.249 35.042 8.806 1.00 1.00 ATOM 337 O ARG 43 13.234 34.683 9.979 1.00 1.00 ATOM 338 N SER 44 14.361 34.969 8.071 1.00 1.00 ATOM 339 CA SER 44 15.663 34.556 8.540 1.00 1.00 ATOM 340 CB SER 44 16.510 34.173 7.325 1.00 1.00 ATOM 341 OG SER 44 16.174 32.845 6.929 1.00 1.00 ATOM 342 C SER 44 16.410 35.599 9.333 1.00 1.00 ATOM 343 O SER 44 16.475 35.510 10.556 1.00 1.00 ATOM 344 N LYS 45 17.025 36.577 8.645 1.00 1.00 ATOM 345 CA LYS 45 17.656 37.736 9.229 1.00 1.00 ATOM 346 CB LYS 45 18.834 37.448 10.209 1.00 1.00 ATOM 347 CG LYS 45 19.949 36.514 9.708 1.00 1.00 ATOM 348 CD LYS 45 21.294 36.821 10.400 1.00 1.00 ATOM 349 CE LYS 45 22.437 35.819 10.174 1.00 1.00 ATOM 350 NZ LYS 45 22.128 34.533 10.797 1.00 1.00 ATOM 351 C LYS 45 18.083 38.640 8.091 1.00 1.00 ATOM 352 O LYS 45 17.843 38.333 6.925 1.00 1.00 TER END