####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS471_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 32 - 41 4.93 62.05 LONGEST_CONTINUOUS_SEGMENT: 10 33 - 42 4.17 63.22 LONGEST_CONTINUOUS_SEGMENT: 10 34 - 43 4.44 64.38 LONGEST_CONTINUOUS_SEGMENT: 10 35 - 44 4.74 65.78 LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 4.24 67.25 LCS_AVERAGE: 21.07 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.98 43.91 LCS_AVERAGE: 11.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 3 - 7 0.98 76.12 LONGEST_CONTINUOUS_SEGMENT: 5 28 - 32 0.85 41.17 LCS_AVERAGE: 8.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 4 4 6 6 6 7 8 8 8 9 9 9 9 9 9 9 9 9 LCS_GDT V 3 V 3 5 6 9 3 4 5 5 6 6 6 7 8 8 8 9 9 9 9 9 9 9 11 11 LCS_GDT Q 4 Q 4 5 6 9 3 4 5 5 6 6 6 7 8 8 8 9 9 9 9 9 10 10 11 11 LCS_GDT G 5 G 5 5 6 9 3 4 5 5 6 6 6 7 8 8 8 9 9 9 9 9 10 10 11 12 LCS_GDT P 6 P 6 5 6 9 3 3 5 5 6 6 6 7 8 8 8 9 9 9 9 9 11 11 12 12 LCS_GDT W 7 W 7 5 6 9 3 3 5 5 6 6 6 7 8 8 8 9 9 9 9 9 11 11 12 12 LCS_GDT V 8 V 8 4 5 9 3 3 4 4 5 5 6 7 8 8 8 9 9 9 9 9 11 11 12 12 LCS_GDT G 9 G 9 4 5 9 0 3 4 4 5 5 6 7 8 8 8 9 9 9 9 9 11 11 12 12 LCS_GDT S 10 S 10 3 3 9 0 3 3 3 4 5 6 6 7 8 8 9 9 9 9 9 11 11 12 12 LCS_GDT S 11 S 11 3 3 9 0 3 3 3 3 4 4 5 6 7 8 8 9 9 9 9 11 11 12 12 LCS_GDT Y 12 Y 12 3 3 9 0 3 3 3 3 4 4 5 6 7 8 8 9 9 9 9 11 11 12 12 LCS_GDT V 13 V 13 3 3 9 0 3 3 3 3 4 4 5 6 6 8 8 9 9 9 9 11 11 12 12 LCS_GDT A 14 A 14 3 3 9 3 3 3 3 3 4 6 7 7 8 9 9 9 9 9 9 11 11 12 12 LCS_GDT E 15 E 15 3 6 9 3 3 3 5 6 6 6 7 7 8 9 9 9 9 9 9 11 11 12 12 LCS_GDT T 16 T 16 3 6 9 3 3 3 5 6 6 6 7 7 8 9 9 9 9 9 9 11 11 12 12 LCS_GDT G 17 G 17 4 6 9 3 3 4 5 6 6 6 7 7 8 9 9 9 9 9 9 10 10 12 12 LCS_GDT Q 18 Q 18 4 6 9 3 3 4 5 6 6 6 7 7 8 9 9 9 9 9 9 10 10 10 11 LCS_GDT N 19 N 19 4 6 9 3 3 4 5 6 6 6 7 7 8 9 9 9 9 9 9 10 11 11 11 LCS_GDT W 20 W 20 4 6 9 3 3 4 5 6 6 6 7 7 8 9 9 9 9 9 10 10 11 11 11 LCS_GDT A 21 A 21 3 5 9 3 3 4 5 5 6 6 6 6 8 9 9 9 9 9 10 10 11 11 11 LCS_GDT S 22 S 22 3 4 9 1 3 4 4 4 6 6 6 6 7 9 9 9 9 9 10 10 11 11 11 LCS_GDT L 23 L 23 3 3 9 1 3 3 3 3 4 4 5 6 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT A 24 A 24 3 3 8 0 3 3 3 3 4 4 5 6 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT A 25 A 25 3 3 8 0 3 3 3 3 4 4 5 6 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT N 26 N 26 3 3 9 0 3 3 3 3 4 4 5 6 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT E 27 E 27 3 6 9 1 3 3 4 5 6 6 7 7 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT L 28 L 28 5 7 9 0 4 5 5 6 7 7 7 7 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT R 29 R 29 5 7 9 2 4 5 6 6 7 7 7 7 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT V 30 V 30 5 7 9 3 4 5 6 6 7 7 7 7 8 8 8 8 9 9 10 10 10 10 11 LCS_GDT T 31 T 31 5 7 9 3 4 5 6 6 7 7 7 7 8 8 8 8 9 9 10 10 10 11 11 LCS_GDT E 32 E 32 5 7 10 3 4 5 6 6 7 7 7 7 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT R 33 R 33 4 7 10 3 4 5 6 6 7 7 7 7 8 9 10 10 10 10 10 10 12 12 12 LCS_GDT P 34 P 34 4 7 10 3 4 5 6 6 7 7 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT F 35 F 35 4 6 10 3 4 5 6 6 6 6 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT W 36 W 36 4 6 10 3 4 5 6 6 6 6 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT I 37 I 37 4 6 10 3 3 5 6 6 6 6 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT S 38 S 38 4 6 10 0 3 5 6 6 6 6 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT S 39 S 39 3 4 10 2 3 3 4 4 6 7 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT F 40 F 40 3 5 10 3 3 3 4 4 6 7 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT I 41 I 41 3 5 10 3 3 3 5 5 6 7 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT G 42 G 42 4 5 10 4 4 4 5 5 6 7 7 8 9 9 10 10 10 10 11 11 12 12 12 LCS_GDT R 43 R 43 4 5 10 4 4 4 5 5 6 7 7 8 8 9 9 9 10 10 11 11 12 12 12 LCS_GDT S 44 S 44 4 5 10 4 4 4 5 5 6 7 7 8 8 9 9 9 10 10 11 11 12 12 12 LCS_GDT K 45 K 45 4 5 10 4 4 4 5 5 5 7 7 8 8 8 9 9 10 10 10 10 10 10 12 LCS_AVERAGE LCS_A: 13.91 ( 8.73 11.93 21.07 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 6 6 7 7 7 8 9 9 10 10 10 10 11 11 12 12 12 GDT PERCENT_AT 9.09 9.09 11.36 13.64 13.64 15.91 15.91 15.91 18.18 20.45 20.45 22.73 22.73 22.73 22.73 25.00 25.00 27.27 27.27 27.27 GDT RMS_LOCAL 0.21 0.21 0.85 1.20 1.20 1.98 1.98 1.98 2.87 3.65 3.65 4.17 4.17 4.17 4.17 5.06 5.06 5.69 5.69 5.69 GDT RMS_ALL_AT 75.13 75.13 41.17 59.93 59.93 43.91 43.91 43.91 69.06 63.64 63.64 63.22 63.22 63.22 63.22 65.17 65.17 64.61 64.61 64.61 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 72.666 0 0.586 0.576 73.516 0.000 0.000 - LGA V 3 V 3 73.314 0 0.108 0.122 74.172 0.000 0.000 73.480 LGA Q 4 Q 4 73.584 0 0.051 0.918 73.765 0.000 0.000 73.685 LGA G 5 G 5 74.700 0 0.025 0.025 74.700 0.000 0.000 - LGA P 6 P 6 75.735 0 0.720 0.614 76.331 0.000 0.000 74.978 LGA W 7 W 7 73.417 0 0.383 1.037 74.106 0.000 0.000 72.893 LGA V 8 V 8 69.779 0 0.668 1.476 71.374 0.000 0.000 71.374 LGA G 9 G 9 68.187 0 0.550 0.550 68.876 0.000 0.000 - LGA S 10 S 10 62.426 0 0.673 0.631 64.483 0.000 0.000 61.711 LGA S 11 S 11 56.067 0 0.623 0.973 58.474 0.000 0.000 55.646 LGA Y 12 Y 12 53.929 0 0.653 1.111 65.335 0.000 0.000 65.335 LGA V 13 V 13 51.328 0 0.607 0.602 54.847 0.000 0.000 50.915 LGA A 14 A 14 44.635 0 0.625 0.609 47.008 0.000 0.000 - LGA E 15 E 15 39.261 0 0.651 1.269 41.449 0.000 0.000 34.464 LGA T 16 T 16 39.460 0 0.702 1.023 43.877 0.000 0.000 43.877 LGA G 17 G 17 37.107 0 0.713 0.713 39.619 0.000 0.000 - LGA Q 18 Q 18 38.212 0 0.113 0.933 39.125 0.000 0.000 39.125 LGA N 19 N 19 38.818 0 0.649 1.367 40.241 0.000 0.000 37.029 LGA W 20 W 20 37.295 0 0.033 0.138 44.480 0.000 0.000 44.026 LGA A 21 A 21 33.917 0 0.661 0.620 35.661 0.000 0.000 - LGA S 22 S 22 30.970 0 0.623 0.799 32.249 0.000 0.000 30.971 LGA L 23 L 23 25.184 0 0.664 1.413 27.454 0.000 0.000 25.732 LGA A 24 A 24 19.431 0 0.622 0.588 21.729 0.000 0.000 - LGA A 25 A 25 17.191 0 0.624 0.612 19.125 0.000 0.000 - LGA N 26 N 26 12.745 0 0.632 1.040 16.770 0.000 0.000 13.647 LGA E 27 E 27 6.757 0 0.652 1.227 9.208 0.455 0.202 8.755 LGA L 28 L 28 2.955 0 0.569 1.410 4.985 25.455 26.818 4.985 LGA R 29 R 29 0.815 0 0.513 1.313 8.516 70.000 35.372 8.516 LGA V 30 V 30 0.697 0 0.136 1.000 2.799 81.818 71.688 2.799 LGA T 31 T 31 1.454 0 0.693 0.962 3.856 54.091 42.338 3.037 LGA E 32 E 32 2.259 0 0.041 1.131 9.205 45.000 21.212 9.205 LGA R 33 R 33 1.479 0 0.038 1.405 13.067 62.727 24.463 13.067 LGA P 34 P 34 2.843 0 0.080 0.404 5.934 23.182 26.494 2.556 LGA F 35 F 35 9.581 0 0.109 1.273 13.492 0.000 0.000 13.492 LGA W 36 W 36 14.584 0 0.095 0.213 18.229 0.000 0.000 9.963 LGA I 37 I 37 21.350 0 0.663 1.382 24.449 0.000 0.000 23.279 LGA S 38 S 38 26.276 0 0.687 0.785 29.144 0.000 0.000 24.416 LGA S 39 S 39 29.146 0 0.718 0.602 31.649 0.000 0.000 27.178 LGA F 40 F 40 34.899 0 0.670 0.890 38.085 0.000 0.000 31.660 LGA I 41 I 41 38.778 0 0.096 0.107 40.876 0.000 0.000 33.924 LGA G 42 G 42 45.342 0 0.654 0.654 46.947 0.000 0.000 - LGA R 43 R 43 47.794 0 0.070 1.224 50.238 0.000 0.000 47.198 LGA S 44 S 44 53.632 0 0.020 0.649 56.998 0.000 0.000 56.998 LGA K 45 K 45 56.913 0 0.039 0.664 60.506 0.000 0.000 58.635 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 35.609 35.556 35.228 8.244 5.650 2.130 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 7 1.98 15.909 15.423 0.337 LGA_LOCAL RMSD: 1.977 Number of atoms: 7 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 43.909 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 35.609 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.658935 * X + -0.734200 * Y + 0.163570 * Z + -46.614017 Y_new = 0.741450 * X + 0.670607 * Y + 0.023185 * Z + -10.161535 Z_new = -0.126713 * X + 0.106002 * Y + 0.986259 * Z + -30.873129 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.844253 0.127055 0.107067 [DEG: 48.3721 7.2797 6.1345 ] ZXZ: 1.711601 0.165966 -0.874165 [DEG: 98.0675 9.5091 -50.0860 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS471_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 7 1.98 15.423 35.61 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS471_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 1SRP_A 1GO7_P 1OMJ_A 4PEU_A 3P4G_A ATOM 9 N ALA 2 72.782 27.228 49.677 1.00 0.50 N ATOM 10 CA ALA 2 72.149 27.505 50.930 1.00 0.50 C ATOM 11 C ALA 2 70.945 28.328 50.629 1.00 0.50 C ATOM 12 O ALA 2 69.872 28.105 51.189 1.00 0.50 O ATOM 13 CB ALA 2 73.114 28.212 51.869 1.00 0.50 C ATOM 14 N VAL 3 71.106 29.299 49.711 1.00 0.50 N ATOM 15 CA VAL 3 70.030 30.163 49.324 1.00 0.50 C ATOM 16 C VAL 3 69.856 31.169 50.410 1.00 0.50 C ATOM 17 O VAL 3 70.194 30.915 51.566 1.00 0.50 O ATOM 18 CB VAL 3 68.729 29.367 49.070 1.00 0.50 C ATOM 19 CG1 VAL 3 67.585 30.312 48.730 1.00 0.50 C ATOM 20 CG2 VAL 3 68.933 28.356 47.954 1.00 0.50 C ATOM 21 N GLN 4 69.340 32.357 50.053 1.00 0.49 N ATOM 22 CA GLN 4 69.149 33.375 51.041 1.00 0.49 C ATOM 23 C GLN 4 67.717 33.781 50.996 1.00 0.49 C ATOM 24 O GLN 4 67.039 33.611 49.983 1.00 0.49 O ATOM 25 CB GLN 4 70.088 34.555 50.784 1.00 0.49 C ATOM 26 CG GLN 4 71.563 34.190 50.804 1.00 0.49 C ATOM 27 CD GLN 4 72.048 33.782 52.180 1.00 0.49 C ATOM 28 OE1 GLN 4 71.875 34.517 53.152 1.00 0.49 O ATOM 29 NE2 GLN 4 72.656 32.604 52.269 1.00 0.49 N ATOM 30 N GLY 5 67.213 34.314 52.124 1.00 0.53 N ATOM 31 CA GLY 5 65.855 34.763 52.179 1.00 0.53 C ATOM 32 C GLY 5 65.024 33.628 52.673 1.00 0.53 C ATOM 33 O GLY 5 65.431 32.468 52.662 1.00 0.53 O ATOM 34 N PRO 6 63.851 33.975 53.118 1.00 0.49 N ATOM 35 CA PRO 6 62.946 32.964 53.589 1.00 0.49 C ATOM 36 C PRO 6 62.368 32.249 52.417 1.00 0.49 C ATOM 37 O PRO 6 62.412 32.791 51.312 1.00 0.49 O ATOM 38 CB PRO 6 61.901 33.765 54.367 1.00 0.49 C ATOM 39 CG PRO 6 61.851 35.090 53.672 1.00 0.49 C ATOM 40 CD PRO 6 63.269 35.374 53.243 1.00 0.49 C ATOM 41 N TRP 7 61.841 31.032 52.624 1.00 0.41 N ATOM 42 CA TRP 7 61.268 30.319 51.525 1.00 0.41 C ATOM 43 C TRP 7 60.046 31.065 51.109 1.00 0.41 C ATOM 44 O TRP 7 59.272 31.524 51.946 1.00 0.41 O ATOM 45 CB TRP 7 60.956 28.875 51.927 1.00 0.41 C ATOM 46 CG TRP 7 60.403 28.041 50.810 1.00 0.41 C ATOM 47 CD1 TRP 7 61.114 27.306 49.906 1.00 0.41 C ATOM 48 CD2 TRP 7 59.019 27.860 50.480 1.00 0.41 C ATOM 49 NE1 TRP 7 60.261 26.675 49.031 1.00 0.41 N ATOM 50 CE2 TRP 7 58.968 26.998 49.361 1.00 0.41 C ATOM 51 CE3 TRP 7 57.821 28.341 51.020 1.00 0.41 C ATOM 52 CZ2 TRP 7 57.760 26.608 48.771 1.00 0.41 C ATOM 53 CZ3 TRP 7 56.621 27.952 50.434 1.00 0.41 C ATOM 54 CH2 TRP 7 56.600 27.094 49.322 1.00 0.41 C ATOM 55 N VAL 8 59.859 31.220 49.786 1.00 0.43 N ATOM 56 CA VAL 8 58.712 31.927 49.309 1.00 0.43 C ATOM 57 C VAL 8 58.060 31.063 48.285 1.00 0.43 C ATOM 58 O VAL 8 58.713 30.250 47.631 1.00 0.43 O ATOM 59 CB VAL 8 59.097 33.308 48.730 1.00 0.43 C ATOM 60 CG1 VAL 8 59.716 34.184 49.808 1.00 0.43 C ATOM 61 CG2 VAL 8 60.057 33.147 47.560 1.00 0.43 C ATOM 62 N GLY 9 56.730 31.206 48.138 1.00 0.44 N ATOM 63 CA GLY 9 56.026 30.438 47.158 1.00 0.44 C ATOM 64 C GLY 9 54.719 31.118 46.939 1.00 0.44 C ATOM 65 O GLY 9 54.181 31.762 47.839 1.00 0.44 O ATOM 66 N SER 10 54.167 30.987 45.719 1.00 0.46 N ATOM 67 CA SER 10 52.910 31.609 45.438 1.00 0.46 C ATOM 68 C SER 10 52.164 30.691 44.532 1.00 0.46 C ATOM 69 O SER 10 52.738 29.773 43.947 1.00 0.46 O ATOM 70 CB SER 10 53.124 32.990 44.815 1.00 0.46 C ATOM 71 OG SER 10 53.755 32.881 43.551 1.00 0.46 O ATOM 72 N SER 11 50.842 30.909 44.412 1.00 0.43 N ATOM 73 CA SER 11 50.060 30.081 43.545 1.00 0.43 C ATOM 74 C SER 11 49.422 30.989 42.548 1.00 0.43 C ATOM 75 O SER 11 49.126 32.145 42.845 1.00 0.43 O ATOM 76 CB SER 11 49.033 29.281 44.348 1.00 0.43 C ATOM 77 OG SER 11 49.677 28.394 45.248 1.00 0.43 O ATOM 78 N TYR 12 49.213 30.483 41.319 1.00 0.40 N ATOM 79 CA TYR 12 48.596 31.297 40.317 1.00 0.40 C ATOM 80 C TYR 12 47.324 30.622 39.935 1.00 0.40 C ATOM 81 O TYR 12 47.310 29.433 39.621 1.00 0.40 O ATOM 82 CB TYR 12 49.538 31.484 39.127 1.00 0.40 C ATOM 83 CG TYR 12 50.798 32.248 39.458 1.00 0.40 C ATOM 84 CD1 TYR 12 51.912 31.592 39.978 1.00 0.40 C ATOM 85 CD2 TYR 12 50.875 33.624 39.250 1.00 0.40 C ATOM 86 CE1 TYR 12 53.077 32.291 40.288 1.00 0.40 C ATOM 87 CE2 TYR 12 52.032 34.333 39.552 1.00 0.40 C ATOM 88 CZ TYR 12 53.131 33.657 40.072 1.00 0.40 C ATOM 89 OH TYR 12 54.279 34.351 40.376 1.00 0.40 O ATOM 90 N VAL 13 46.208 31.372 39.970 1.00 0.42 N ATOM 91 CA VAL 13 44.955 30.794 39.599 1.00 0.42 C ATOM 92 C VAL 13 44.382 31.654 38.524 1.00 0.42 C ATOM 93 O VAL 13 44.518 32.876 38.553 1.00 0.42 O ATOM 94 CB VAL 13 44.002 30.677 40.810 1.00 0.42 C ATOM 95 CG1 VAL 13 42.656 30.116 40.378 1.00 0.42 C ATOM 96 CG2 VAL 13 44.620 29.806 41.892 1.00 0.42 C ATOM 97 N ALA 14 43.738 31.023 37.523 1.00 0.43 N ATOM 98 CA ALA 14 43.149 31.787 36.467 1.00 0.43 C ATOM 99 C ALA 14 41.885 31.096 36.082 1.00 0.43 C ATOM 100 O ALA 14 41.736 29.893 36.283 1.00 0.43 O ATOM 101 CB ALA 14 44.115 31.916 35.299 1.00 0.43 C ATOM 102 N GLU 15 40.926 31.862 35.533 1.00 0.43 N ATOM 103 CA GLU 15 39.696 31.266 35.108 1.00 0.43 C ATOM 104 C GLU 15 39.711 31.281 33.618 1.00 0.43 C ATOM 105 O GLU 15 40.075 32.282 33.002 1.00 0.43 O ATOM 106 CB GLU 15 38.503 32.029 35.691 1.00 0.43 C ATOM 107 CG GLU 15 37.151 31.434 35.330 1.00 0.43 C ATOM 108 CD GLU 15 35.995 32.180 35.965 1.00 0.43 C ATOM 109 OE1 GLU 15 36.239 33.238 36.587 1.00 0.43 O ATOM 110 OE2 GLU 15 34.844 31.711 35.843 1.00 0.43 O ATOM 111 N THR 16 39.333 30.151 32.995 1.00 0.43 N ATOM 112 CA THR 16 39.335 30.114 31.565 1.00 0.43 C ATOM 113 C THR 16 37.951 29.782 31.116 1.00 0.43 C ATOM 114 O THR 16 37.252 28.991 31.746 1.00 0.43 O ATOM 115 CB THR 16 40.349 29.084 31.027 1.00 0.43 C ATOM 116 OG1 THR 16 41.667 29.437 31.469 1.00 0.43 O ATOM 117 CG2 THR 16 40.329 29.059 29.507 1.00 0.43 C ATOM 118 N GLY 17 37.517 30.415 30.012 1.00 0.44 N ATOM 119 CA GLY 17 36.218 30.142 29.480 1.00 0.44 C ATOM 120 C GLY 17 35.238 30.979 30.226 1.00 0.44 C ATOM 121 O GLY 17 35.572 31.608 31.229 1.00 0.44 O ATOM 122 N GLN 18 33.985 31.004 29.738 1.00 0.43 N ATOM 123 CA GLN 18 32.957 31.749 30.395 1.00 0.43 C ATOM 124 C GLN 18 31.767 30.854 30.462 1.00 0.43 C ATOM 125 O GLN 18 31.662 29.887 29.707 1.00 0.43 O ATOM 126 CB GLN 18 32.672 33.049 29.639 1.00 0.43 C ATOM 127 CG GLN 18 33.860 33.993 29.559 1.00 0.43 C ATOM 128 CD GLN 18 33.543 35.271 28.808 1.00 0.43 C ATOM 129 OE1 GLN 18 32.885 35.245 27.768 1.00 0.43 O ATOM 130 NE2 GLN 18 34.008 36.398 29.335 1.00 0.43 N ATOM 131 N ASN 19 30.841 31.138 31.395 1.00 0.41 N ATOM 132 CA ASN 19 29.672 30.319 31.474 1.00 0.41 C ATOM 133 C ASN 19 28.622 31.003 30.669 1.00 0.41 C ATOM 134 O ASN 19 28.247 32.140 30.953 1.00 0.41 O ATOM 135 CB ASN 19 29.255 30.119 32.934 1.00 0.41 C ATOM 136 CG ASN 19 28.082 29.172 33.084 1.00 0.41 C ATOM 137 OD1 ASN 19 27.124 29.227 32.311 1.00 0.41 O ATOM 138 ND2 ASN 19 28.153 28.295 34.078 1.00 0.41 N ATOM 139 N TRP 20 28.134 30.323 29.616 1.00 0.39 N ATOM 140 CA TRP 20 27.130 30.917 28.789 1.00 0.39 C ATOM 141 C TRP 20 25.882 30.123 28.948 1.00 0.39 C ATOM 142 O TRP 20 25.889 28.898 28.825 1.00 0.39 O ATOM 143 CB TRP 20 27.595 30.962 27.332 1.00 0.39 C ATOM 144 CG TRP 20 28.721 31.922 27.085 1.00 0.39 C ATOM 145 CD1 TRP 20 30.056 31.636 27.083 1.00 0.39 C ATOM 146 CD2 TRP 20 28.608 33.323 26.804 1.00 0.39 C ATOM 147 NE1 TRP 20 30.784 32.773 26.819 1.00 0.39 N ATOM 148 CE2 TRP 20 29.917 33.825 26.642 1.00 0.39 C ATOM 149 CE3 TRP 20 27.525 34.201 26.674 1.00 0.39 C ATOM 150 CZ2 TRP 20 30.175 35.169 26.356 1.00 0.39 C ATOM 151 CZ3 TRP 20 27.781 35.540 26.387 1.00 0.39 C ATOM 152 CH2 TRP 20 29.098 36.009 26.233 1.00 0.39 C ATOM 153 N ALA 21 24.771 30.815 29.255 1.00 0.41 N ATOM 154 CA ALA 21 23.511 30.147 29.368 1.00 0.41 C ATOM 155 C ALA 21 22.496 31.085 28.813 1.00 0.41 C ATOM 156 O ALA 21 22.622 32.299 28.961 1.00 0.41 O ATOM 157 CB ALA 21 23.236 29.772 30.816 1.00 0.41 C ATOM 158 N SER 22 21.468 30.549 28.135 1.00 0.43 N ATOM 159 CA SER 22 20.470 31.428 27.610 1.00 0.43 C ATOM 160 C SER 22 19.174 30.695 27.604 1.00 0.43 C ATOM 161 O SER 22 19.133 29.473 27.477 1.00 0.43 O ATOM 162 CB SER 22 20.860 31.905 26.210 1.00 0.43 C ATOM 163 OG SER 22 19.871 32.771 25.680 1.00 0.43 O ATOM 164 N LEU 23 18.068 31.444 27.773 1.00 0.44 N ATOM 165 CA LEU 23 16.766 30.856 27.715 1.00 0.44 C ATOM 166 C LEU 23 16.092 31.570 26.597 1.00 0.44 C ATOM 167 O LEU 23 16.170 32.793 26.502 1.00 0.44 O ATOM 168 CB LEU 23 16.051 31.001 29.060 1.00 0.44 C ATOM 169 CG LEU 23 14.617 30.474 29.125 1.00 0.44 C ATOM 170 CD1 LEU 23 14.593 28.965 28.939 1.00 0.44 C ATOM 171 CD2 LEU 23 13.969 30.859 30.446 1.00 0.44 C ATOM 172 N ALA 24 15.421 30.827 25.696 1.00 0.53 N ATOM 173 CA ALA 24 14.780 31.521 24.623 1.00 0.53 C ATOM 174 C ALA 24 13.316 31.264 24.714 1.00 0.53 C ATOM 175 O ALA 24 12.875 30.122 24.829 1.00 0.53 O ATOM 176 CB ALA 24 15.346 31.073 23.285 1.00 0.53 C ATOM 177 N ALA 25 12.523 32.348 24.686 1.00 0.54 N ATOM 178 CA ALA 25 11.098 32.222 24.688 1.00 0.54 C ATOM 179 C ALA 25 10.593 33.418 23.960 1.00 0.54 C ATOM 180 O ALA 25 11.147 34.510 24.088 1.00 0.54 O ATOM 181 CB ALA 25 10.574 32.125 26.111 1.00 0.54 C ATOM 182 N ASN 26 9.532 33.249 23.151 1.00 0.47 N ATOM 183 CA ASN 26 9.033 34.400 22.463 1.00 0.47 C ATOM 184 C ASN 26 7.546 34.326 22.469 1.00 0.47 C ATOM 185 O ASN 26 6.961 33.262 22.268 1.00 0.47 O ATOM 186 CB ASN 26 9.592 34.457 21.040 1.00 0.47 C ATOM 187 CG ASN 26 9.196 35.723 20.306 1.00 0.47 C ATOM 188 OD1 ASN 26 8.028 35.919 19.972 1.00 0.47 O ATOM 189 ND2 ASN 26 10.169 36.591 20.054 1.00 0.47 N ATOM 190 N GLU 27 6.891 35.473 22.728 1.00 0.50 N ATOM 191 CA GLU 27 5.464 35.504 22.671 1.00 0.50 C ATOM 192 C GLU 27 5.125 36.543 21.658 1.00 0.50 C ATOM 193 O GLU 27 5.508 37.704 21.799 1.00 0.50 O ATOM 194 CB GLU 27 4.878 35.802 24.053 1.00 0.50 C ATOM 195 CG GLU 27 3.358 35.802 24.097 1.00 0.50 C ATOM 196 CD GLU 27 2.815 36.050 25.491 1.00 0.50 C ATOM 197 OE1 GLU 27 3.617 36.072 26.448 1.00 0.50 O ATOM 198 OE2 GLU 27 1.584 36.221 25.628 1.00 0.50 O ATOM 199 N LEU 28 4.414 36.149 20.589 1.00 0.50 N ATOM 200 CA LEU 28 4.067 37.125 19.603 1.00 0.50 C ATOM 201 C LEU 28 2.579 37.164 19.558 1.00 0.50 C ATOM 202 O LEU 28 1.929 36.152 19.299 1.00 0.50 O ATOM 203 CB LEU 28 4.688 36.766 18.251 1.00 0.50 C ATOM 204 CG LEU 28 4.347 37.692 17.084 1.00 0.50 C ATOM 205 CD1 LEU 28 4.899 39.087 17.330 1.00 0.50 C ATOM 206 CD2 LEU 28 4.891 37.127 15.780 1.00 0.50 C ATOM 207 N ARG 29 1.995 38.345 19.827 1.00 0.48 N ATOM 208 CA ARG 29 0.571 38.446 19.762 1.00 0.48 C ATOM 209 C ARG 29 0.256 39.656 18.952 1.00 0.48 C ATOM 210 O ARG 29 0.825 40.726 19.166 1.00 0.48 O ATOM 211 CB ARG 29 -0.025 38.519 21.170 1.00 0.48 C ATOM 212 CG ARG 29 0.226 37.281 22.015 1.00 0.48 C ATOM 213 CD ARG 29 -0.572 36.091 21.510 1.00 0.48 C ATOM 214 NE ARG 29 -0.373 34.906 22.343 1.00 0.48 N ATOM 215 CZ ARG 29 0.598 34.016 22.165 1.00 0.48 C ATOM 216 NH1 ARG 29 1.471 34.173 21.178 1.00 0.48 N ATOM 217 NH2 ARG 29 0.694 32.971 22.976 1.00 0.48 N ATOM 218 N VAL 30 -0.654 39.506 17.973 1.00 0.50 N ATOM 219 CA VAL 30 -1.030 40.635 17.181 1.00 0.50 C ATOM 220 C VAL 30 -2.513 40.588 17.050 1.00 0.50 C ATOM 221 O VAL 30 -3.104 39.513 16.949 1.00 0.50 O ATOM 222 CB VAL 30 -0.327 40.622 15.804 1.00 0.50 C ATOM 223 CG1 VAL 30 -0.714 39.377 15.021 1.00 0.50 C ATOM 224 CG2 VAL 30 -0.675 41.875 15.017 1.00 0.50 C ATOM 225 N THR 31 -3.163 41.765 17.071 1.00 0.50 N ATOM 226 CA THR 31 -4.586 41.778 16.917 1.00 0.50 C ATOM 227 C THR 31 -4.889 42.687 15.777 1.00 0.50 C ATOM 228 O THR 31 -4.303 43.762 15.654 1.00 0.50 O ATOM 229 CB THR 31 -5.289 42.238 18.208 1.00 0.50 C ATOM 230 OG1 THR 31 -4.950 41.353 19.281 1.00 0.50 O ATOM 231 CG2 THR 31 -6.800 42.232 18.022 1.00 0.50 C ATOM 232 N GLU 32 -5.807 42.264 14.890 1.00 0.51 N ATOM 233 CA GLU 32 -6.168 43.111 13.796 1.00 0.51 C ATOM 234 C GLU 32 -7.642 43.307 13.884 1.00 0.51 C ATOM 235 O GLU 32 -8.394 42.353 14.077 1.00 0.51 O ATOM 236 CB GLU 32 -5.737 42.484 12.468 1.00 0.51 C ATOM 237 CG GLU 32 -6.032 43.345 11.250 1.00 0.51 C ATOM 238 CD GLU 32 -5.540 42.722 9.959 1.00 0.51 C ATOM 239 OE1 GLU 32 -4.900 41.649 10.021 1.00 0.51 O ATOM 240 OE2 GLU 32 -5.795 43.301 8.882 1.00 0.51 O ATOM 241 N ARG 33 -8.099 44.568 13.766 1.00 0.52 N ATOM 242 CA ARG 33 -9.510 44.789 13.802 1.00 0.52 C ATOM 243 C ARG 33 -9.868 45.470 12.527 1.00 0.52 C ATOM 244 O ARG 33 -9.312 46.508 12.174 1.00 0.52 O ATOM 245 CB ARG 33 -9.893 45.614 15.032 1.00 0.52 C ATOM 246 CG ARG 33 -11.385 45.875 15.167 1.00 0.52 C ATOM 247 CD ARG 33 -11.697 46.693 16.408 1.00 0.52 C ATOM 248 NE ARG 33 -13.131 46.926 16.563 1.00 0.52 N ATOM 249 CZ ARG 33 -13.794 47.936 16.009 1.00 0.52 C ATOM 250 NH1 ARG 33 -13.151 48.818 15.257 1.00 0.52 N ATOM 251 NH2 ARG 33 -15.099 48.062 16.209 1.00 0.52 N ATOM 252 N PRO 34 -10.774 44.873 11.810 1.00 0.52 N ATOM 253 CA PRO 34 -11.220 45.466 10.585 1.00 0.52 C ATOM 254 C PRO 34 -12.215 46.528 10.903 1.00 0.52 C ATOM 255 O PRO 34 -12.834 46.463 11.964 1.00 0.52 O ATOM 256 CB PRO 34 -11.835 44.288 9.829 1.00 0.52 C ATOM 257 CG PRO 34 -12.357 43.385 10.901 1.00 0.52 C ATOM 258 CD PRO 34 -11.366 43.489 12.031 1.00 0.52 C ATOM 259 N PHE 35 -12.374 47.524 10.014 1.00 0.47 N ATOM 260 CA PHE 35 -13.362 48.528 10.262 1.00 0.47 C ATOM 261 C PHE 35 -14.346 48.418 9.150 1.00 0.47 C ATOM 262 O PHE 35 -13.974 48.448 7.976 1.00 0.47 O ATOM 263 CB PHE 35 -12.712 49.911 10.344 1.00 0.47 C ATOM 264 CG PHE 35 -11.760 50.065 11.494 1.00 0.47 C ATOM 265 CD1 PHE 35 -10.430 49.677 11.372 1.00 0.47 C ATOM 266 CD2 PHE 35 -12.191 50.598 12.704 1.00 0.47 C ATOM 267 CE1 PHE 35 -9.547 49.820 12.439 1.00 0.47 C ATOM 268 CE2 PHE 35 -11.307 50.741 13.772 1.00 0.47 C ATOM 269 CZ PHE 35 -9.992 50.355 13.643 1.00 0.47 C ATOM 270 N TRP 36 -15.639 48.267 9.488 1.00 0.46 N ATOM 271 CA TRP 36 -16.617 48.189 8.450 1.00 0.46 C ATOM 272 C TRP 36 -17.732 49.101 8.829 1.00 0.46 C ATOM 273 O TRP 36 -18.002 49.314 10.012 1.00 0.46 O ATOM 274 CB TRP 36 -17.090 46.745 8.265 1.00 0.46 C ATOM 275 CG TRP 36 -16.004 45.804 7.832 1.00 0.46 C ATOM 276 CD1 TRP 36 -15.098 45.175 8.636 1.00 0.46 C ATOM 277 CD2 TRP 36 -15.715 45.388 6.492 1.00 0.46 C ATOM 278 NE1 TRP 36 -14.259 44.389 7.880 1.00 0.46 N ATOM 279 CE2 TRP 36 -14.615 44.502 6.559 1.00 0.46 C ATOM 280 CE3 TRP 36 -16.278 45.676 5.244 1.00 0.46 C ATOM 281 CZ2 TRP 36 -14.068 43.902 5.420 1.00 0.46 C ATOM 282 CZ3 TRP 36 -15.732 45.080 4.111 1.00 0.46 C ATOM 283 CH2 TRP 36 -14.637 44.202 4.209 1.00 0.46 C ATOM 284 N ILE 37 -18.398 49.687 7.820 1.00 0.48 N ATOM 285 CA ILE 37 -19.493 50.560 8.099 1.00 0.48 C ATOM 286 C ILE 37 -20.685 49.995 7.408 1.00 0.48 C ATOM 287 O ILE 37 -20.604 49.571 6.256 1.00 0.48 O ATOM 288 CB ILE 37 -19.195 52.007 7.641 1.00 0.48 C ATOM 289 CG1 ILE 37 -17.981 52.562 8.392 1.00 0.48 C ATOM 290 CG2 ILE 37 -20.411 52.896 7.856 1.00 0.48 C ATOM 291 CD1 ILE 37 -17.470 53.879 7.845 1.00 0.48 C ATOM 292 N SER 38 -21.831 49.955 8.111 1.00 0.50 N ATOM 293 CA SER 38 -23.013 49.440 7.492 1.00 0.50 C ATOM 294 C SER 38 -23.963 50.578 7.376 1.00 0.50 C ATOM 295 O SER 38 -24.075 51.406 8.282 1.00 0.50 O ATOM 296 CB SER 38 -23.585 48.281 8.311 1.00 0.50 C ATOM 297 OG SER 38 -22.688 47.185 8.330 1.00 0.50 O ATOM 298 N SER 39 -24.660 50.667 6.230 1.00 0.52 N ATOM 299 CA SER 39 -25.597 51.734 6.053 1.00 0.52 C ATOM 300 C SER 39 -26.700 51.214 5.195 1.00 0.52 C ATOM 301 O SER 39 -26.563 50.180 4.544 1.00 0.52 O ATOM 302 CB SER 39 -24.910 52.952 5.433 1.00 0.52 C ATOM 303 OG SER 39 -24.476 52.669 4.116 1.00 0.52 O ATOM 304 N PHE 40 -27.843 51.923 5.195 1.00 0.51 N ATOM 305 CA PHE 40 -28.938 51.525 4.368 1.00 0.51 C ATOM 306 C PHE 40 -28.967 52.505 3.247 1.00 0.51 C ATOM 307 O PHE 40 -28.847 53.710 3.464 1.00 0.51 O ATOM 308 CB PHE 40 -30.238 51.498 5.175 1.00 0.51 C ATOM 309 CG PHE 40 -30.262 50.453 6.250 1.00 0.51 C ATOM 310 CD1 PHE 40 -29.729 50.715 7.507 1.00 0.51 C ATOM 311 CD2 PHE 40 -30.817 49.200 6.011 1.00 0.51 C ATOM 312 CE1 PHE 40 -29.751 49.745 8.506 1.00 0.51 C ATOM 313 CE2 PHE 40 -30.839 48.229 7.009 1.00 0.51 C ATOM 314 CZ PHE 40 -30.310 48.498 8.252 1.00 0.51 C ATOM 315 N ILE 41 -29.107 52.013 2.003 1.00 0.52 N ATOM 316 CA ILE 41 -29.085 52.927 0.902 1.00 0.52 C ATOM 317 C ILE 41 -30.308 52.731 0.075 1.00 0.52 C ATOM 318 O ILE 41 -30.801 51.618 -0.086 1.00 0.52 O ATOM 319 CB ILE 41 -27.814 52.746 0.040 1.00 0.52 C ATOM 320 CG1 ILE 41 -26.561 53.005 0.880 1.00 0.52 C ATOM 321 CG2 ILE 41 -27.851 53.674 -1.165 1.00 0.52 C ATOM 322 CD1 ILE 41 -25.266 52.635 0.185 1.00 0.52 C ATOM 323 N GLY 42 -30.843 53.849 -0.452 1.00 0.53 N ATOM 324 CA GLY 42 -31.978 53.797 -1.322 1.00 0.53 C ATOM 325 C GLY 42 -33.200 54.093 -0.524 1.00 0.53 C ATOM 326 O GLY 42 -33.388 53.572 0.574 1.00 0.53 O ATOM 327 N ARG 43 -34.071 54.956 -1.078 1.00 0.51 N ATOM 328 CA ARG 43 -35.309 55.279 -0.438 1.00 0.51 C ATOM 329 C ARG 43 -36.289 55.513 -1.539 1.00 0.51 C ATOM 330 O ARG 43 -35.923 55.997 -2.608 1.00 0.51 O ATOM 331 CB ARG 43 -35.139 56.496 0.474 1.00 0.51 C ATOM 332 CG ARG 43 -34.771 57.776 -0.260 1.00 0.51 C ATOM 333 CD ARG 43 -34.566 58.931 0.706 1.00 0.51 C ATOM 334 NE ARG 43 -34.111 60.140 0.022 1.00 0.51 N ATOM 335 CZ ARG 43 -34.916 61.024 -0.560 1.00 0.51 C ATOM 336 NH1 ARG 43 -36.228 60.836 -0.545 1.00 0.51 N ATOM 337 NH2 ARG 43 -34.405 62.092 -1.156 1.00 0.51 N ATOM 338 N SER 44 -37.565 55.155 -1.315 1.00 0.51 N ATOM 339 CA SER 44 -38.528 55.376 -2.350 1.00 0.51 C ATOM 340 C SER 44 -39.711 56.038 -1.730 1.00 0.51 C ATOM 341 O SER 44 -40.079 55.742 -0.593 1.00 0.51 O ATOM 342 CB SER 44 -38.901 54.056 -3.028 1.00 0.51 C ATOM 343 OG SER 44 -39.902 54.260 -4.008 1.00 0.51 O ATOM 344 N LYS 45 -40.330 56.978 -2.467 1.00 0.50 N ATOM 345 CA LYS 45 -41.490 57.641 -1.958 1.00 0.50 C ATOM 346 C LYS 45 -42.443 57.799 -3.093 1.00 0.50 C ATOM 347 O LYS 45 -42.038 57.874 -4.255 1.00 0.50 O ATOM 348 CB LYS 45 -41.108 58.985 -1.333 1.00 0.50 C ATOM 349 CG LYS 45 -40.544 59.992 -2.322 1.00 0.50 C ATOM 350 CD LYS 45 -40.140 61.284 -1.631 1.00 0.50 C ATOM 351 CE LYS 45 -39.637 62.315 -2.630 1.00 0.50 C ATOM 352 NZ LYS 45 -39.235 63.584 -1.964 1.00 0.50 N TER END