####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS471_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 31 - 45 4.56 47.88 LCS_AVERAGE: 29.49 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 27 - 33 1.62 31.89 LCS_AVERAGE: 11.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.81 49.64 LONGEST_CONTINUOUS_SEGMENT: 4 4 - 7 0.62 47.53 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.78 49.14 LONGEST_CONTINUOUS_SEGMENT: 4 16 - 19 0.62 34.69 LONGEST_CONTINUOUS_SEGMENT: 4 17 - 20 0.83 31.98 LONGEST_CONTINUOUS_SEGMENT: 4 30 - 33 0.48 31.03 LONGEST_CONTINUOUS_SEGMENT: 4 36 - 39 0.44 35.80 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.88 53.93 LCS_AVERAGE: 8.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 4 12 3 3 4 4 4 5 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT V 3 V 3 4 5 12 3 3 4 5 5 6 7 9 9 9 11 11 12 12 12 16 17 17 17 18 LCS_GDT Q 4 Q 4 4 5 12 3 4 4 5 5 6 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT G 5 G 5 4 5 12 3 4 4 5 5 6 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT P 6 P 6 4 5 12 3 4 4 5 5 6 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT W 7 W 7 4 5 12 3 4 4 5 5 5 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT V 8 V 8 4 5 12 3 4 4 4 5 6 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT G 9 G 9 4 5 12 0 4 4 4 5 6 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT S 10 S 10 3 5 12 1 3 3 3 4 5 7 9 9 9 11 11 12 12 13 16 17 17 17 18 LCS_GDT S 11 S 11 3 3 12 0 3 3 3 3 4 4 5 6 8 11 11 12 12 13 16 17 17 17 18 LCS_GDT Y 12 Y 12 3 3 12 1 3 3 3 3 4 4 5 6 8 8 10 12 12 13 16 17 17 17 18 LCS_GDT V 13 V 13 3 3 12 3 3 3 3 4 4 4 5 6 8 11 11 12 12 13 16 17 17 17 18 LCS_GDT A 14 A 14 3 3 11 3 3 3 3 4 4 6 8 9 9 9 10 11 11 13 16 17 17 17 18 LCS_GDT E 15 E 15 3 6 11 3 3 3 5 6 7 7 8 9 9 9 10 11 11 12 14 17 17 17 18 LCS_GDT T 16 T 16 4 6 11 3 4 5 5 5 7 7 8 9 9 9 9 11 11 13 16 17 17 17 18 LCS_GDT G 17 G 17 4 6 11 3 4 5 5 6 7 7 8 9 9 9 9 10 11 12 16 17 17 17 18 LCS_GDT Q 18 Q 18 4 6 11 3 4 5 5 6 7 7 8 9 9 9 9 10 11 13 16 17 17 17 18 LCS_GDT N 19 N 19 4 6 11 3 4 5 5 6 7 7 8 9 9 10 10 11 11 11 12 12 13 15 18 LCS_GDT W 20 W 20 4 6 11 3 4 5 5 6 7 7 8 9 9 10 10 11 11 11 12 12 14 17 18 LCS_GDT A 21 A 21 3 5 11 3 3 4 4 6 7 7 8 9 9 10 10 11 11 11 12 12 14 16 18 LCS_GDT S 22 S 22 3 5 11 3 3 4 4 6 7 7 8 9 9 10 10 11 11 11 12 14 14 17 18 LCS_GDT L 23 L 23 3 4 11 3 3 3 3 4 4 5 6 7 9 10 10 11 11 11 12 12 13 13 16 LCS_GDT A 24 A 24 3 4 11 3 3 3 3 4 4 5 6 7 9 10 10 11 11 11 12 12 13 13 15 LCS_GDT A 25 A 25 3 4 11 0 3 3 3 4 5 6 6 7 9 10 10 11 11 11 12 12 13 13 15 LCS_GDT N 26 N 26 3 3 14 0 3 3 3 4 4 6 6 6 9 10 10 11 12 13 14 14 14 16 16 LCS_GDT E 27 E 27 3 7 14 1 3 4 6 7 7 8 8 9 11 12 12 13 13 13 14 14 14 16 16 LCS_GDT L 28 L 28 3 7 14 0 5 5 6 7 7 8 9 10 11 12 12 13 13 13 14 14 14 16 16 LCS_GDT R 29 R 29 3 7 14 3 3 4 5 7 7 8 9 10 11 12 12 13 13 13 14 14 14 16 16 LCS_GDT V 30 V 30 4 7 14 3 5 5 6 7 7 8 9 10 11 12 12 13 13 13 14 14 14 16 16 LCS_GDT T 31 T 31 4 7 15 3 5 5 6 7 7 8 9 10 11 12 12 13 14 14 15 15 15 16 16 LCS_GDT E 32 E 32 4 7 15 3 5 5 6 7 7 8 9 10 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT R 33 R 33 4 7 15 3 5 5 6 7 7 8 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT P 34 P 34 3 5 15 3 3 3 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT F 35 F 35 3 4 15 3 3 3 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT W 36 W 36 4 5 15 3 4 4 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT I 37 I 37 4 5 15 3 4 4 4 6 7 8 9 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT S 38 S 38 4 5 15 3 4 4 4 6 7 8 10 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT S 39 S 39 4 5 15 3 4 4 4 8 9 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT F 40 F 40 3 5 15 3 3 3 4 6 8 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT I 41 I 41 3 5 15 3 3 4 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 16 16 LCS_GDT G 42 G 42 4 5 15 3 3 4 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 15 15 LCS_GDT R 43 R 43 4 5 15 3 3 4 4 5 9 9 11 11 11 13 14 14 14 14 15 15 15 15 15 LCS_GDT S 44 S 44 4 5 15 3 3 4 5 8 9 9 11 11 11 13 14 14 14 14 15 15 15 15 15 LCS_GDT K 45 K 45 4 5 15 0 3 4 4 8 9 9 11 11 11 12 14 14 14 14 15 15 15 15 15 LCS_AVERAGE LCS_A: 16.41 ( 8.11 11.62 29.49 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 5 5 6 8 9 9 11 11 11 13 14 14 14 14 16 17 17 17 18 GDT PERCENT_AT 6.82 11.36 11.36 13.64 18.18 20.45 20.45 25.00 25.00 25.00 29.55 31.82 31.82 31.82 31.82 36.36 38.64 38.64 38.64 40.91 GDT RMS_LOCAL 0.05 0.59 0.59 1.30 1.92 2.07 2.07 2.63 2.63 2.63 3.70 3.84 3.84 3.84 3.84 6.25 6.50 6.50 6.50 6.96 GDT RMS_ALL_AT 34.54 31.15 31.15 31.57 49.25 49.39 49.39 49.23 49.23 49.23 47.58 48.05 48.05 48.05 48.05 38.23 37.81 37.81 37.81 37.52 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 79.126 0 0.041 0.044 81.878 0.000 0.000 - LGA V 3 V 3 80.599 0 0.103 0.104 81.032 0.000 0.000 81.032 LGA Q 4 Q 4 82.417 0 0.086 0.700 91.526 0.000 0.000 91.526 LGA G 5 G 5 81.284 0 0.122 0.122 81.412 0.000 0.000 - LGA P 6 P 6 78.613 0 0.729 0.633 82.981 0.000 0.000 81.889 LGA W 7 W 7 77.302 0 0.341 1.322 77.882 0.000 0.000 72.065 LGA V 8 V 8 75.344 0 0.670 0.684 75.785 0.000 0.000 74.614 LGA G 9 G 9 75.460 0 0.537 0.537 75.544 0.000 0.000 - LGA S 10 S 10 76.593 0 0.678 0.870 77.941 0.000 0.000 76.314 LGA S 11 S 11 73.794 0 0.605 0.566 74.171 0.000 0.000 73.008 LGA Y 12 Y 12 68.623 0 0.657 0.987 70.494 0.000 0.000 61.224 LGA V 13 V 13 69.338 0 0.602 0.612 70.620 0.000 0.000 70.620 LGA A 14 A 14 68.800 0 0.630 0.609 69.230 0.000 0.000 - LGA E 15 E 15 63.481 0 0.636 1.354 64.865 0.000 0.000 61.678 LGA T 16 T 16 60.289 0 0.714 1.391 61.718 0.000 0.000 58.870 LGA G 17 G 17 60.398 0 0.069 0.069 60.398 0.000 0.000 - LGA Q 18 Q 18 55.968 0 0.040 1.594 57.439 0.000 0.000 55.202 LGA N 19 N 19 52.008 0 0.671 1.232 55.829 0.000 0.000 55.829 LGA W 20 W 20 46.026 0 0.044 1.107 48.024 0.000 0.000 41.243 LGA A 21 A 21 43.684 0 0.649 0.606 44.562 0.000 0.000 - LGA S 22 S 22 40.988 0 0.621 0.599 41.608 0.000 0.000 40.120 LGA L 23 L 23 42.463 0 0.599 0.541 46.521 0.000 0.000 46.521 LGA A 24 A 24 39.974 0 0.630 0.607 40.701 0.000 0.000 - LGA A 25 A 25 33.362 0 0.605 0.601 35.404 0.000 0.000 - LGA N 26 N 26 31.910 0 0.644 0.763 32.366 0.000 0.000 29.087 LGA E 27 E 27 32.119 0 0.670 1.170 33.759 0.000 0.000 31.745 LGA L 28 L 28 27.836 0 0.639 0.556 30.974 0.000 0.000 29.946 LGA R 29 R 29 22.725 0 0.519 1.608 26.878 0.000 0.000 26.878 LGA V 30 V 30 17.646 0 0.139 1.175 19.545 0.000 0.000 18.053 LGA T 31 T 31 11.516 0 0.623 0.947 13.796 0.000 0.000 11.326 LGA E 32 E 32 7.352 0 0.123 1.213 14.991 0.000 0.000 14.991 LGA R 33 R 33 3.905 0 0.390 1.647 14.734 7.727 2.810 14.734 LGA P 34 P 34 2.855 0 0.623 0.580 5.567 35.909 22.078 5.567 LGA F 35 F 35 1.838 0 0.550 1.322 3.543 46.364 40.661 3.250 LGA W 36 W 36 1.346 0 0.599 0.623 7.248 41.818 20.909 4.832 LGA I 37 I 37 7.715 0 0.103 0.802 13.506 0.000 0.000 13.506 LGA S 38 S 38 7.251 0 0.186 0.183 8.116 0.455 0.303 6.800 LGA S 39 S 39 2.335 0 0.206 0.650 5.218 25.909 20.303 5.218 LGA F 40 F 40 3.671 0 0.659 0.943 10.193 20.909 7.603 10.193 LGA I 41 I 41 1.243 0 0.068 0.158 1.984 70.000 66.136 1.235 LGA G 42 G 42 2.139 0 0.707 0.707 4.926 29.545 29.545 - LGA R 43 R 43 3.313 0 0.105 0.815 11.303 33.636 12.231 10.579 LGA S 44 S 44 1.662 0 0.663 0.794 5.791 58.182 39.697 5.791 LGA K 45 K 45 2.998 0 0.527 1.004 8.577 33.636 17.576 8.577 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 24.412 24.350 24.374 9.184 6.360 2.442 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.63 21.591 19.293 0.402 LGA_LOCAL RMSD: 2.635 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 49.231 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 24.412 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.077064 * X + 0.880257 * Y + -0.468197 * Z + -27.544065 Y_new = 0.916659 * X + 0.122156 * Y + 0.380545 * Z + -40.511936 Z_new = 0.392171 * X + -0.458503 * Y + -0.797482 * Z + 27.189192 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.486923 -0.402991 -2.619805 [DEG: 85.1944 -23.0897 -150.1038 ] ZXZ: -2.253288 2.493906 2.434012 [DEG: -129.1039 142.8903 139.4586 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS471_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.63 19.293 24.41 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS471_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT 1SRP_A 1GO7_P 1OMJ_A 4PEU_A 3P4G_A ATOM 9 N ALA 2 -44.996 92.151 9.292 1.00 0.50 N ATOM 10 CA ALA 2 -44.550 92.811 8.106 1.00 0.50 C ATOM 11 CB ALA 2 -44.341 91.861 6.916 1.00 0.50 C ATOM 12 C ALA 2 -45.594 93.805 7.725 1.00 0.50 C ATOM 13 O ALA 2 -46.758 93.683 8.107 1.00 0.50 O ATOM 14 N VAL 3 -45.182 94.840 6.972 1.00 0.51 N ATOM 15 CA VAL 3 -46.101 95.858 6.569 1.00 0.51 C ATOM 16 CB VAL 3 -45.533 97.243 6.664 1.00 0.51 C ATOM 17 CG1 VAL 3 -46.565 98.241 6.111 1.00 0.51 C ATOM 18 CG2 VAL 3 -45.133 97.504 8.127 1.00 0.51 C ATOM 19 C VAL 3 -46.442 95.611 5.137 1.00 0.51 C ATOM 20 O VAL 3 -45.654 95.035 4.387 1.00 0.51 O ATOM 21 N GLN 4 -47.657 96.026 4.736 1.00 0.53 N ATOM 22 CA GLN 4 -48.096 95.836 3.387 1.00 0.53 C ATOM 23 CB GLN 4 -49.607 96.034 3.178 1.00 0.53 C ATOM 24 CG GLN 4 -50.069 97.469 3.432 1.00 0.53 C ATOM 25 CD GLN 4 -51.564 97.534 3.164 1.00 0.53 C ATOM 26 OE1 GLN 4 -52.212 98.543 3.439 1.00 0.53 O ATOM 27 NE2 GLN 4 -52.129 96.428 2.612 1.00 0.53 N ATOM 28 C GLN 4 -47.412 96.850 2.540 1.00 0.53 C ATOM 29 O GLN 4 -46.809 97.798 3.042 1.00 0.53 O ATOM 30 N GLY 5 -47.467 96.647 1.210 1.00 0.58 N ATOM 31 CA GLY 5 -46.837 97.557 0.307 1.00 0.58 C ATOM 32 C GLY 5 -45.794 96.769 -0.401 1.00 0.58 C ATOM 33 O GLY 5 -45.845 95.540 -0.435 1.00 0.58 O ATOM 34 N PRO 6 -44.852 97.446 -0.978 1.00 0.53 N ATOM 35 CA PRO 6 -43.796 96.723 -1.614 1.00 0.53 C ATOM 36 CD PRO 6 -45.134 98.705 -1.648 1.00 0.53 C ATOM 37 CB PRO 6 -43.065 97.739 -2.486 1.00 0.53 C ATOM 38 CG PRO 6 -44.166 98.757 -2.842 1.00 0.53 C ATOM 39 C PRO 6 -42.985 96.114 -0.522 1.00 0.53 C ATOM 40 O PRO 6 -42.978 96.661 0.580 1.00 0.53 O ATOM 41 N TRP 7 -42.314 94.979 -0.782 1.00 0.45 N ATOM 42 CA TRP 7 -41.584 94.373 0.289 1.00 0.45 C ATOM 43 CB TRP 7 -40.970 93.012 -0.074 1.00 0.45 C ATOM 44 CG TRP 7 -40.204 92.375 1.059 1.00 0.45 C ATOM 45 CD2 TRP 7 -39.247 91.319 0.890 1.00 0.45 C ATOM 46 CD1 TRP 7 -40.237 92.656 2.393 1.00 0.45 C ATOM 47 NE1 TRP 7 -39.367 91.834 3.068 1.00 0.45 N ATOM 48 CE2 TRP 7 -38.748 91.007 2.155 1.00 0.45 C ATOM 49 CE3 TRP 7 -38.820 90.663 -0.229 1.00 0.45 C ATOM 50 CZ2 TRP 7 -37.810 90.030 2.320 1.00 0.45 C ATOM 51 CZ3 TRP 7 -37.873 89.679 -0.059 1.00 0.45 C ATOM 52 CH2 TRP 7 -37.378 89.368 1.192 1.00 0.45 C ATOM 53 C TRP 7 -40.470 95.294 0.645 1.00 0.45 C ATOM 54 O TRP 7 -39.700 95.715 -0.216 1.00 0.45 O ATOM 55 N VAL 8 -40.373 95.645 1.941 1.00 0.47 N ATOM 56 CA VAL 8 -39.324 96.515 2.376 1.00 0.47 C ATOM 57 CB VAL 8 -39.679 97.968 2.243 1.00 0.47 C ATOM 58 CG1 VAL 8 -38.519 98.823 2.779 1.00 0.47 C ATOM 59 CG2 VAL 8 -40.040 98.249 0.775 1.00 0.47 C ATOM 60 C VAL 8 -39.115 96.240 3.828 1.00 0.47 C ATOM 61 O VAL 8 -40.005 95.734 4.508 1.00 0.47 O ATOM 62 N GLY 9 -37.909 96.550 4.342 1.00 0.47 N ATOM 63 CA GLY 9 -37.676 96.376 5.744 1.00 0.47 C ATOM 64 C GLY 9 -36.360 95.697 5.923 1.00 0.47 C ATOM 65 O GLY 9 -35.897 94.968 5.047 1.00 0.47 O ATOM 66 N SER 10 -35.732 95.932 7.091 1.00 0.50 N ATOM 67 CA SER 10 -34.476 95.318 7.394 1.00 0.50 C ATOM 68 CB SER 10 -33.283 96.284 7.282 1.00 0.50 C ATOM 69 OG SER 10 -32.076 95.608 7.599 1.00 0.50 O ATOM 70 C SER 10 -34.561 94.892 8.821 1.00 0.50 C ATOM 71 O SER 10 -35.160 95.578 9.646 1.00 0.50 O ATOM 72 N SER 11 -33.978 93.723 9.154 1.00 0.54 N ATOM 73 CA SER 11 -34.036 93.309 10.521 1.00 0.54 C ATOM 74 CB SER 11 -35.357 92.618 10.891 1.00 0.54 C ATOM 75 OG SER 11 -35.348 92.232 12.256 1.00 0.54 O ATOM 76 C SER 11 -32.942 92.325 10.763 1.00 0.54 C ATOM 77 O SER 11 -32.432 91.698 9.838 1.00 0.54 O ATOM 78 N TYR 12 -32.543 92.185 12.044 1.00 0.47 N ATOM 79 CA TYR 12 -31.547 91.221 12.400 1.00 0.47 C ATOM 80 CB TYR 12 -30.296 91.831 13.061 1.00 0.47 C ATOM 81 CG TYR 12 -29.362 90.711 13.374 1.00 0.47 C ATOM 82 CD1 TYR 12 -28.544 90.185 12.401 1.00 0.47 C ATOM 83 CD2 TYR 12 -29.307 90.187 14.645 1.00 0.47 C ATOM 84 CE1 TYR 12 -27.682 89.154 12.693 1.00 0.47 C ATOM 85 CE2 TYR 12 -28.448 89.156 14.944 1.00 0.47 C ATOM 86 CZ TYR 12 -27.636 88.637 13.964 1.00 0.47 C ATOM 87 OH TYR 12 -26.753 87.579 14.266 1.00 0.47 O ATOM 88 C TYR 12 -32.188 90.324 13.401 1.00 0.47 C ATOM 89 O TYR 12 -32.762 90.786 14.385 1.00 0.47 O ATOM 90 N VAL 13 -32.122 89.001 13.163 1.00 0.50 N ATOM 91 CA VAL 13 -32.729 88.091 14.083 1.00 0.50 C ATOM 92 CB VAL 13 -33.893 87.347 13.499 1.00 0.50 C ATOM 93 CG1 VAL 13 -34.426 86.361 14.551 1.00 0.50 C ATOM 94 CG2 VAL 13 -34.934 88.372 13.015 1.00 0.50 C ATOM 95 C VAL 13 -31.695 87.082 14.445 1.00 0.50 C ATOM 96 O VAL 13 -30.766 86.826 13.680 1.00 0.50 O ATOM 97 N ALA 14 -31.821 86.491 15.648 1.00 0.51 N ATOM 98 CA ALA 14 -30.867 85.506 16.056 1.00 0.51 C ATOM 99 CB ALA 14 -31.050 85.030 17.508 1.00 0.51 C ATOM 100 C ALA 14 -31.056 84.330 15.161 1.00 0.51 C ATOM 101 O ALA 14 -32.164 84.056 14.703 1.00 0.51 O ATOM 102 N GLU 15 -29.958 83.612 14.870 1.00 0.49 N ATOM 103 CA GLU 15 -30.070 82.477 14.007 1.00 0.49 C ATOM 104 CB GLU 15 -28.833 82.267 13.116 1.00 0.49 C ATOM 105 CG GLU 15 -28.627 83.388 12.095 1.00 0.49 C ATOM 106 CD GLU 15 -27.349 83.096 11.323 1.00 0.49 C ATOM 107 OE1 GLU 15 -27.213 81.951 10.811 1.00 0.49 O ATOM 108 OE2 GLU 15 -26.488 84.010 11.239 1.00 0.49 O ATOM 109 C GLU 15 -30.196 81.278 14.881 1.00 0.49 C ATOM 110 O GLU 15 -29.311 80.985 15.685 1.00 0.49 O ATOM 111 N THR 16 -31.328 80.559 14.760 1.00 0.48 N ATOM 112 CA THR 16 -31.506 79.392 15.563 1.00 0.48 C ATOM 113 CB THR 16 -32.453 79.590 16.711 1.00 0.48 C ATOM 114 OG1 THR 16 -32.446 78.447 17.553 1.00 0.48 O ATOM 115 CG2 THR 16 -33.864 79.835 16.151 1.00 0.48 C ATOM 116 C THR 16 -32.081 78.329 14.695 1.00 0.48 C ATOM 117 O THR 16 -32.644 78.605 13.637 1.00 0.48 O ATOM 118 N GLY 17 -31.929 77.064 15.126 1.00 0.48 N ATOM 119 CA GLY 17 -32.478 75.972 14.381 1.00 0.48 C ATOM 120 C GLY 17 -31.559 75.690 13.240 1.00 0.48 C ATOM 121 O GLY 17 -31.892 74.919 12.342 1.00 0.48 O ATOM 122 N GLN 18 -30.365 76.309 13.245 1.00 0.48 N ATOM 123 CA GLN 18 -29.478 76.060 12.151 1.00 0.48 C ATOM 124 CB GLN 18 -28.286 77.029 12.063 1.00 0.48 C ATOM 125 CG GLN 18 -27.284 76.896 13.211 1.00 0.48 C ATOM 126 CD GLN 18 -27.980 77.280 14.507 1.00 0.48 C ATOM 127 OE1 GLN 18 -28.589 76.442 15.170 1.00 0.48 O ATOM 128 NE2 GLN 18 -27.886 78.583 14.884 1.00 0.48 N ATOM 129 C GLN 18 -28.926 74.690 12.343 1.00 0.48 C ATOM 130 O GLN 18 -28.570 74.302 13.455 1.00 0.48 O ATOM 131 N ASN 19 -28.868 73.910 11.251 1.00 0.47 N ATOM 132 CA ASN 19 -28.329 72.589 11.351 1.00 0.47 C ATOM 133 CB ASN 19 -29.341 71.477 11.016 1.00 0.47 C ATOM 134 CG ASN 19 -29.744 71.618 9.554 1.00 0.47 C ATOM 135 OD1 ASN 19 -29.985 72.721 9.063 1.00 0.47 O ATOM 136 ND2 ASN 19 -29.814 70.469 8.831 1.00 0.47 N ATOM 137 C ASN 19 -27.230 72.504 10.351 1.00 0.47 C ATOM 138 O ASN 19 -27.252 73.188 9.329 1.00 0.47 O ATOM 139 N TRP 20 -26.216 71.666 10.634 1.00 0.47 N ATOM 140 CA TRP 20 -25.145 71.536 9.697 1.00 0.47 C ATOM 141 CB TRP 20 -24.059 70.555 10.175 1.00 0.47 C ATOM 142 CG TRP 20 -22.898 70.364 9.229 1.00 0.47 C ATOM 143 CD2 TRP 20 -22.860 69.385 8.180 1.00 0.47 C ATOM 144 CD1 TRP 20 -21.705 71.027 9.181 1.00 0.47 C ATOM 145 NE1 TRP 20 -20.927 70.519 8.168 1.00 0.47 N ATOM 146 CE2 TRP 20 -21.626 69.507 7.544 1.00 0.47 C ATOM 147 CE3 TRP 20 -23.783 68.458 7.778 1.00 0.47 C ATOM 148 CZ2 TRP 20 -21.293 68.705 6.492 1.00 0.47 C ATOM 149 CZ3 TRP 20 -23.441 67.646 6.721 1.00 0.47 C ATOM 150 CH2 TRP 20 -22.220 67.768 6.091 1.00 0.47 C ATOM 151 C TRP 20 -25.756 70.974 8.460 1.00 0.47 C ATOM 152 O TRP 20 -26.371 69.909 8.490 1.00 0.47 O ATOM 153 N ALA 21 -25.621 71.693 7.330 1.00 0.49 N ATOM 154 CA ALA 21 -26.178 71.174 6.120 1.00 0.49 C ATOM 155 CB ALA 21 -27.490 71.860 5.699 1.00 0.49 C ATOM 156 C ALA 21 -25.188 71.414 5.033 1.00 0.49 C ATOM 157 O ALA 21 -24.536 72.456 4.983 1.00 0.49 O ATOM 158 N SER 22 -25.036 70.416 4.144 1.00 0.54 N ATOM 159 CA SER 22 -24.164 70.549 3.018 1.00 0.54 C ATOM 160 CB SER 22 -22.738 71.002 3.372 1.00 0.54 C ATOM 161 OG SER 22 -22.074 69.995 4.121 1.00 0.54 O ATOM 162 C SER 22 -24.066 69.191 2.413 1.00 0.54 C ATOM 163 O SER 22 -24.522 68.210 3.000 1.00 0.54 O ATOM 164 N LEU 23 -23.485 69.096 1.206 1.00 0.56 N ATOM 165 CA LEU 23 -23.346 67.794 0.634 1.00 0.56 C ATOM 166 CB LEU 23 -23.782 67.722 -0.838 1.00 0.56 C ATOM 167 CG LEU 23 -25.280 68.016 -1.040 1.00 0.56 C ATOM 168 CD1 LEU 23 -25.688 67.881 -2.515 1.00 0.56 C ATOM 169 CD2 LEU 23 -26.145 67.161 -0.100 1.00 0.56 C ATOM 170 C LEU 23 -21.896 67.449 0.693 1.00 0.56 C ATOM 171 O LEU 23 -21.099 67.922 -0.115 1.00 0.56 O ATOM 172 N ALA 24 -21.516 66.618 1.680 1.00 0.70 N ATOM 173 CA ALA 24 -20.149 66.211 1.781 1.00 0.70 C ATOM 174 CB ALA 24 -19.175 67.372 2.046 1.00 0.70 C ATOM 175 C ALA 24 -20.059 65.286 2.946 1.00 0.70 C ATOM 176 O ALA 24 -20.902 65.316 3.842 1.00 0.70 O ATOM 177 N ALA 25 -19.034 64.415 2.955 1.00 0.70 N ATOM 178 CA ALA 25 -18.882 63.534 4.071 1.00 0.70 C ATOM 179 CB ALA 25 -19.858 62.345 4.056 1.00 0.70 C ATOM 180 C ALA 25 -17.503 62.971 4.006 1.00 0.70 C ATOM 181 O ALA 25 -16.889 62.921 2.942 1.00 0.70 O ATOM 182 N ASN 26 -16.977 62.541 5.166 1.00 0.60 N ATOM 183 CA ASN 26 -15.677 61.944 5.181 1.00 0.60 C ATOM 184 CB ASN 26 -14.841 62.296 6.423 1.00 0.60 C ATOM 185 CG ASN 26 -13.425 61.796 6.172 1.00 0.60 C ATOM 186 OD1 ASN 26 -13.050 61.507 5.038 1.00 0.60 O ATOM 187 ND2 ASN 26 -12.617 61.684 7.261 1.00 0.60 N ATOM 188 C ASN 26 -15.908 60.473 5.207 1.00 0.60 C ATOM 189 O ASN 26 -16.932 60.009 5.704 1.00 0.60 O ATOM 190 N GLU 27 -14.970 59.694 4.638 1.00 0.54 N ATOM 191 CA GLU 27 -15.169 58.278 4.646 1.00 0.54 C ATOM 192 CB GLU 27 -14.235 57.511 3.692 1.00 0.54 C ATOM 193 CG GLU 27 -14.551 56.015 3.596 1.00 0.54 C ATOM 194 CD GLU 27 -13.560 55.381 2.628 1.00 0.54 C ATOM 195 OE1 GLU 27 -12.607 56.091 2.207 1.00 0.54 O ATOM 196 OE2 GLU 27 -13.742 54.180 2.295 1.00 0.54 O ATOM 197 C GLU 27 -14.911 57.793 6.031 1.00 0.54 C ATOM 198 O GLU 27 -14.013 58.279 6.718 1.00 0.54 O ATOM 199 N LEU 28 -15.725 56.822 6.484 1.00 0.56 N ATOM 200 CA LEU 28 -15.534 56.256 7.785 1.00 0.56 C ATOM 201 CB LEU 28 -16.819 56.173 8.625 1.00 0.56 C ATOM 202 CG LEU 28 -17.395 57.542 9.032 1.00 0.56 C ATOM 203 CD1 LEU 28 -18.672 57.385 9.871 1.00 0.56 C ATOM 204 CD2 LEU 28 -16.330 58.405 9.729 1.00 0.56 C ATOM 205 C LEU 28 -15.073 54.858 7.561 1.00 0.56 C ATOM 206 O LEU 28 -15.546 54.176 6.653 1.00 0.56 O ATOM 207 N ARG 29 -14.109 54.398 8.377 1.00 0.49 N ATOM 208 CA ARG 29 -13.650 53.056 8.206 1.00 0.49 C ATOM 209 CB ARG 29 -12.129 52.954 8.001 1.00 0.49 C ATOM 210 CG ARG 29 -11.673 53.649 6.716 1.00 0.49 C ATOM 211 CD ARG 29 -10.168 53.585 6.450 1.00 0.49 C ATOM 212 NE ARG 29 -9.925 54.311 5.170 1.00 0.49 N ATOM 213 CZ ARG 29 -8.652 54.528 4.731 1.00 0.49 C ATOM 214 NH1 ARG 29 -7.589 54.076 5.460 1.00 0.49 N ATOM 215 NH2 ARG 29 -8.441 55.203 3.564 1.00 0.49 N ATOM 216 C ARG 29 -14.016 52.319 9.448 1.00 0.49 C ATOM 217 O ARG 29 -13.802 52.803 10.559 1.00 0.49 O ATOM 218 N VAL 30 -14.605 51.119 9.285 1.00 0.50 N ATOM 219 CA VAL 30 -15.006 50.352 10.425 1.00 0.50 C ATOM 220 CB VAL 30 -16.016 49.289 10.108 1.00 0.50 C ATOM 221 CG1 VAL 30 -17.307 49.968 9.620 1.00 0.50 C ATOM 222 CG2 VAL 30 -15.399 48.319 9.085 1.00 0.50 C ATOM 223 C VAL 30 -13.792 49.674 10.960 1.00 0.50 C ATOM 224 O VAL 30 -12.904 49.279 10.205 1.00 0.50 O ATOM 225 N THR 31 -13.713 49.548 12.296 1.00 0.51 N ATOM 226 CA THR 31 -12.585 48.877 12.862 1.00 0.51 C ATOM 227 CB THR 31 -12.550 48.937 14.362 1.00 0.51 C ATOM 228 OG1 THR 31 -12.483 50.289 14.794 1.00 0.51 O ATOM 229 CG2 THR 31 -11.329 48.151 14.865 1.00 0.51 C ATOM 230 C THR 31 -12.712 47.445 12.467 1.00 0.51 C ATOM 231 O THR 31 -13.624 46.747 12.908 1.00 0.51 O ATOM 232 N GLU 32 -11.798 46.976 11.600 1.00 0.56 N ATOM 233 CA GLU 32 -11.882 45.612 11.183 1.00 0.56 C ATOM 234 CB GLU 32 -13.029 45.352 10.192 1.00 0.56 C ATOM 235 CG GLU 32 -13.255 43.872 9.885 1.00 0.56 C ATOM 236 CD GLU 32 -14.508 43.765 9.028 1.00 0.56 C ATOM 237 OE1 GLU 32 -15.106 44.831 8.718 1.00 0.56 O ATOM 238 OE2 GLU 32 -14.886 42.616 8.673 1.00 0.56 O ATOM 239 C GLU 32 -10.600 45.263 10.504 1.00 0.56 C ATOM 240 O GLU 32 -9.785 46.131 10.197 1.00 0.56 O ATOM 241 N ARG 33 -10.394 43.955 10.266 1.00 0.62 N ATOM 242 CA ARG 33 -9.208 43.487 9.613 1.00 0.62 C ATOM 243 CB ARG 33 -9.148 43.910 8.136 1.00 0.62 C ATOM 244 CG ARG 33 -7.918 43.407 7.386 1.00 0.62 C ATOM 245 CD ARG 33 -7.915 43.836 5.918 1.00 0.62 C ATOM 246 NE ARG 33 -8.120 45.311 5.890 1.00 0.62 N ATOM 247 CZ ARG 33 -7.499 46.065 4.937 1.00 0.62 C ATOM 248 NH1 ARG 33 -6.656 45.476 4.042 1.00 0.62 N ATOM 249 NH2 ARG 33 -7.727 47.410 4.881 1.00 0.62 N ATOM 250 C ARG 33 -8.018 44.031 10.338 1.00 0.62 C ATOM 251 O ARG 33 -7.087 44.560 9.732 1.00 0.62 O ATOM 252 N PRO 34 -8.030 43.899 11.634 1.00 0.60 N ATOM 253 CA PRO 34 -6.959 44.414 12.433 1.00 0.60 C ATOM 254 CD PRO 34 -8.688 42.777 12.289 1.00 0.60 C ATOM 255 CB PRO 34 -7.264 43.958 13.854 1.00 0.60 C ATOM 256 CG PRO 34 -7.952 42.599 13.629 1.00 0.60 C ATOM 257 C PRO 34 -5.675 43.807 11.968 1.00 0.60 C ATOM 258 O PRO 34 -4.632 44.427 12.159 1.00 0.60 O ATOM 259 N PHE 35 -5.720 42.586 11.399 1.00 0.55 N ATOM 260 CA PHE 35 -4.510 41.931 10.998 1.00 0.55 C ATOM 261 CB PHE 35 -4.762 40.537 10.395 1.00 0.55 C ATOM 262 CG PHE 35 -5.372 39.676 11.448 1.00 0.55 C ATOM 263 CD1 PHE 35 -6.726 39.724 11.686 1.00 0.55 C ATOM 264 CD2 PHE 35 -4.596 38.813 12.189 1.00 0.55 C ATOM 265 CE1 PHE 35 -7.298 38.930 12.650 1.00 0.55 C ATOM 266 CE2 PHE 35 -5.163 38.016 13.154 1.00 0.55 C ATOM 267 CZ PHE 35 -6.516 38.075 13.389 1.00 0.55 C ATOM 268 C PHE 35 -3.844 42.736 9.928 1.00 0.55 C ATOM 269 O PHE 35 -2.670 43.089 10.037 1.00 0.55 O ATOM 270 N TRP 36 -4.601 43.071 8.869 1.00 0.52 N ATOM 271 CA TRP 36 -4.043 43.779 7.755 1.00 0.52 C ATOM 272 CB TRP 36 -5.035 43.942 6.595 1.00 0.52 C ATOM 273 CG TRP 36 -5.207 42.697 5.763 1.00 0.52 C ATOM 274 CD2 TRP 36 -4.757 42.599 4.404 1.00 0.52 C ATOM 275 CD1 TRP 36 -5.805 41.509 6.060 1.00 0.52 C ATOM 276 NE1 TRP 36 -5.745 40.669 4.972 1.00 0.52 N ATOM 277 CE2 TRP 36 -5.104 41.332 3.945 1.00 0.52 C ATOM 278 CE3 TRP 36 -4.108 43.498 3.607 1.00 0.52 C ATOM 279 CZ2 TRP 36 -4.805 40.940 2.670 1.00 0.52 C ATOM 280 CZ3 TRP 36 -3.805 43.101 2.325 1.00 0.52 C ATOM 281 CH2 TRP 36 -4.148 41.846 1.866 1.00 0.52 C ATOM 282 C TRP 36 -3.595 45.134 8.178 1.00 0.52 C ATOM 283 O TRP 36 -2.496 45.567 7.832 1.00 0.52 O ATOM 284 N ILE 37 -4.423 45.831 8.967 1.00 0.57 N ATOM 285 CA ILE 37 -4.099 47.177 9.319 1.00 0.57 C ATOM 286 CB ILE 37 -5.178 47.837 10.142 1.00 0.57 C ATOM 287 CG1 ILE 37 -5.004 49.368 10.175 1.00 0.57 C ATOM 288 CG2 ILE 37 -5.217 47.178 11.529 1.00 0.57 C ATOM 289 CD1 ILE 37 -3.725 49.858 10.852 1.00 0.57 C ATOM 290 C ILE 37 -2.807 47.172 10.069 1.00 0.57 C ATOM 291 O ILE 37 -1.951 48.021 9.827 1.00 0.57 O ATOM 292 N SER 38 -2.619 46.211 10.991 1.00 0.74 N ATOM 293 CA SER 38 -1.391 46.205 11.727 1.00 0.74 C ATOM 294 CB SER 38 -1.304 45.062 12.756 1.00 0.74 C ATOM 295 OG SER 38 -1.260 43.801 12.104 1.00 0.74 O ATOM 296 C SER 38 -0.299 46.026 10.732 1.00 0.74 C ATOM 297 O SER 38 0.654 46.805 10.691 1.00 0.74 O ATOM 298 N SER 39 -0.442 45.001 9.873 1.00 0.73 N ATOM 299 CA SER 39 0.521 44.761 8.845 1.00 0.73 C ATOM 300 CB SER 39 0.622 45.952 7.880 1.00 0.73 C ATOM 301 OG SER 39 1.580 45.688 6.872 1.00 0.73 O ATOM 302 C SER 39 1.847 44.536 9.492 1.00 0.73 C ATOM 303 O SER 39 2.896 44.798 8.906 1.00 0.73 O ATOM 304 N PHE 40 1.840 44.011 10.729 1.00 0.68 N ATOM 305 CA PHE 40 3.087 43.786 11.396 1.00 0.68 C ATOM 306 CB PHE 40 2.922 43.530 12.905 1.00 0.68 C ATOM 307 CG PHE 40 4.268 43.303 13.504 1.00 0.68 C ATOM 308 CD1 PHE 40 5.089 44.368 13.806 1.00 0.68 C ATOM 309 CD2 PHE 40 4.706 42.030 13.780 1.00 0.68 C ATOM 310 CE1 PHE 40 6.329 44.165 14.360 1.00 0.68 C ATOM 311 CE2 PHE 40 5.947 41.820 14.335 1.00 0.68 C ATOM 312 CZ PHE 40 6.761 42.888 14.629 1.00 0.68 C ATOM 313 C PHE 40 3.726 42.579 10.788 1.00 0.68 C ATOM 314 O PHE 40 3.062 41.579 10.525 1.00 0.68 O ATOM 315 N ILE 41 5.046 42.655 10.529 1.00 0.68 N ATOM 316 CA ILE 41 5.749 41.526 9.993 1.00 0.68 C ATOM 317 CB ILE 41 6.367 41.789 8.650 1.00 0.68 C ATOM 318 CG1 ILE 41 5.289 42.158 7.617 1.00 0.68 C ATOM 319 CG2 ILE 41 7.196 40.554 8.264 1.00 0.68 C ATOM 320 CD1 ILE 41 5.861 42.735 6.321 1.00 0.68 C ATOM 321 C ILE 41 6.881 41.242 10.930 1.00 0.68 C ATOM 322 O ILE 41 7.656 42.140 11.258 1.00 0.68 O ATOM 323 N GLY 42 7.015 39.982 11.390 1.00 0.68 N ATOM 324 CA GLY 42 8.097 39.680 12.284 1.00 0.68 C ATOM 325 C GLY 42 7.835 38.348 12.919 1.00 0.68 C ATOM 326 O GLY 42 6.956 37.605 12.490 1.00 0.68 O ATOM 327 N ARG 43 8.626 38.006 13.959 1.00 0.62 N ATOM 328 CA ARG 43 8.425 36.761 14.645 1.00 0.62 C ATOM 329 CB ARG 43 9.628 35.812 14.547 1.00 0.62 C ATOM 330 CG ARG 43 9.934 35.397 13.107 1.00 0.62 C ATOM 331 CD ARG 43 9.301 34.071 12.679 1.00 0.62 C ATOM 332 NE ARG 43 7.826 34.254 12.582 1.00 0.62 N ATOM 333 CZ ARG 43 7.279 34.825 11.469 1.00 0.62 C ATOM 334 NH1 ARG 43 8.084 35.370 10.509 1.00 0.62 N ATOM 335 NH2 ARG 43 5.923 34.866 11.319 1.00 0.62 N ATOM 336 C ARG 43 8.207 37.084 16.090 1.00 0.62 C ATOM 337 O ARG 43 9.009 37.769 16.718 1.00 0.62 O ATOM 338 N SER 44 7.081 36.593 16.642 1.00 0.69 N ATOM 339 CA SER 44 6.703 36.859 17.999 1.00 0.69 C ATOM 340 CB SER 44 5.243 36.478 18.294 1.00 0.69 C ATOM 341 OG SER 44 5.067 35.076 18.159 1.00 0.69 O ATOM 342 C SER 44 7.569 36.097 18.940 1.00 0.69 C ATOM 343 O SER 44 7.719 36.493 20.095 1.00 0.69 O ATOM 344 N LYS 45 8.162 34.979 18.478 1.00 0.71 N ATOM 345 CA LYS 45 8.908 34.166 19.393 1.00 0.71 C ATOM 346 CB LYS 45 9.567 32.965 18.701 1.00 0.71 C ATOM 347 CG LYS 45 8.562 31.984 18.097 1.00 0.71 C ATOM 348 CD LYS 45 9.193 31.004 17.106 1.00 0.71 C ATOM 349 CE LYS 45 9.650 31.670 15.806 1.00 0.71 C ATOM 350 NZ LYS 45 10.247 30.663 14.904 1.00 0.71 N ATOM 351 C LYS 45 10.002 34.988 19.992 1.00 0.71 C ATOM 352 O LYS 45 10.011 35.207 21.202 1.00 0.71 O TER END