####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS471_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 31 - 44 4.66 41.38 LONGEST_CONTINUOUS_SEGMENT: 14 32 - 45 4.49 42.37 LCS_AVERAGE: 29.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 15 - 21 1.79 28.22 LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.79 25.53 LCS_AVERAGE: 12.29 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 3 - 6 1.00 40.68 LONGEST_CONTINUOUS_SEGMENT: 4 4 - 7 0.74 47.78 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.79 44.74 LONGEST_CONTINUOUS_SEGMENT: 4 29 - 32 0.89 30.98 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.68 43.03 LONGEST_CONTINUOUS_SEGMENT: 4 36 - 39 0.49 36.21 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.99 53.32 LCS_AVERAGE: 7.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 13 3 3 4 4 4 6 8 9 9 10 11 13 13 13 13 13 14 15 16 16 LCS_GDT V 3 V 3 4 5 13 3 3 4 4 5 5 8 9 9 9 11 13 13 13 13 13 14 15 16 16 LCS_GDT Q 4 Q 4 4 5 13 3 4 4 4 5 6 8 9 9 10 11 13 13 13 13 13 14 15 16 16 LCS_GDT G 5 G 5 4 5 13 3 4 4 4 5 6 8 9 9 10 11 13 13 13 13 13 14 15 18 19 LCS_GDT P 6 P 6 4 5 13 2 4 5 5 5 6 8 9 9 10 11 13 13 13 13 13 14 15 18 19 LCS_GDT W 7 W 7 4 5 13 0 4 5 5 5 6 8 9 9 10 11 13 13 13 13 13 14 15 18 19 LCS_GDT V 8 V 8 4 5 13 3 4 5 5 5 5 7 9 9 10 11 13 13 13 13 13 14 15 16 16 LCS_GDT G 9 G 9 4 5 13 3 4 5 5 5 6 8 9 9 10 11 13 13 13 13 13 14 15 16 16 LCS_GDT S 10 S 10 3 5 13 3 3 5 5 5 6 8 9 9 10 11 13 13 13 13 13 14 15 16 17 LCS_GDT S 11 S 11 3 4 13 3 3 3 3 4 4 5 6 7 9 10 13 13 13 13 13 14 15 18 19 LCS_GDT Y 12 Y 12 3 4 13 3 3 3 3 4 4 5 6 7 10 11 13 13 13 13 13 14 15 18 19 LCS_GDT V 13 V 13 3 3 13 3 3 3 3 3 4 5 5 7 10 11 13 13 13 13 13 14 15 18 19 LCS_GDT A 14 A 14 3 3 13 3 3 3 3 4 7 7 7 9 9 10 13 13 13 13 13 14 15 18 19 LCS_GDT E 15 E 15 3 7 12 3 3 4 5 6 7 8 8 9 9 9 10 10 11 13 13 14 15 18 19 LCS_GDT T 16 T 16 3 7 11 3 4 4 5 6 7 8 8 9 9 9 10 10 11 13 13 14 15 18 19 LCS_GDT G 17 G 17 3 7 11 2 4 4 5 6 7 8 8 9 9 9 10 10 11 13 13 14 15 18 19 LCS_GDT Q 18 Q 18 3 7 11 1 3 4 4 6 7 8 8 9 9 9 10 10 11 13 13 13 15 18 19 LCS_GDT N 19 N 19 3 7 11 3 3 4 4 6 7 8 8 9 9 9 10 10 11 13 13 13 15 18 19 LCS_GDT W 20 W 20 3 7 11 3 4 4 5 6 7 8 8 9 9 9 10 10 11 13 13 13 15 17 19 LCS_GDT A 21 A 21 3 7 11 3 4 4 5 6 7 8 8 9 9 9 10 10 11 13 13 13 15 18 19 LCS_GDT S 22 S 22 3 4 11 3 3 4 4 5 7 8 8 9 9 9 10 10 11 13 13 13 15 18 19 LCS_GDT L 23 L 23 3 4 11 3 3 3 3 4 4 5 6 7 8 9 10 10 11 13 13 13 15 18 19 LCS_GDT A 24 A 24 3 4 11 3 3 3 3 4 4 5 6 7 8 8 9 10 10 13 13 13 15 18 19 LCS_GDT A 25 A 25 3 4 11 1 3 3 3 4 4 5 6 7 8 9 9 10 11 13 13 13 15 18 19 LCS_GDT N 26 N 26 3 4 13 0 3 3 3 4 4 5 6 7 8 9 9 10 12 13 13 14 15 18 19 LCS_GDT E 27 E 27 3 5 13 0 3 3 4 5 7 8 8 9 11 11 11 11 12 13 13 14 14 14 16 LCS_GDT L 28 L 28 3 7 13 0 3 4 5 6 7 8 8 9 11 11 11 11 12 13 13 14 14 14 16 LCS_GDT R 29 R 29 4 7 13 3 3 4 5 6 7 8 8 9 11 11 11 11 12 13 13 14 14 14 16 LCS_GDT V 30 V 30 4 7 13 3 3 4 4 5 7 8 8 9 11 11 11 11 12 13 13 14 14 14 16 LCS_GDT T 31 T 31 4 7 14 3 3 4 5 6 7 8 8 9 11 11 12 12 12 13 13 14 14 14 16 LCS_GDT E 32 E 32 4 7 14 3 4 4 5 6 7 9 10 10 11 13 13 13 13 13 13 14 14 14 15 LCS_GDT R 33 R 33 4 7 14 3 4 4 5 6 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT P 34 P 34 4 7 14 3 4 4 5 6 7 8 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT F 35 F 35 4 6 14 3 4 4 5 6 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT W 36 W 36 4 6 14 3 4 4 5 6 7 8 9 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT I 37 I 37 4 5 14 3 4 4 4 5 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT S 38 S 38 4 5 14 3 4 4 4 5 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT S 39 S 39 4 5 14 3 4 4 5 6 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT F 40 F 40 3 5 14 3 3 4 5 5 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT I 41 I 41 3 5 14 3 3 4 5 6 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT G 42 G 42 4 5 14 3 3 4 5 6 7 9 10 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT R 43 R 43 4 5 14 3 3 4 4 5 5 7 9 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT S 44 S 44 4 5 14 3 3 4 4 5 5 7 9 10 12 13 13 13 13 13 13 14 14 14 14 LCS_GDT K 45 K 45 4 5 14 0 1 4 4 5 5 7 8 9 9 10 11 11 12 13 13 14 14 14 14 LCS_AVERAGE LCS_A: 16.49 ( 7.95 12.29 29.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 5 5 6 7 9 10 10 12 13 13 13 13 13 13 14 15 18 19 GDT PERCENT_AT 6.82 9.09 11.36 11.36 13.64 15.91 20.45 22.73 22.73 27.27 29.55 29.55 29.55 29.55 29.55 29.55 31.82 34.09 40.91 43.18 GDT RMS_LOCAL 0.05 0.49 1.14 1.14 1.41 1.79 2.83 3.01 3.01 3.63 3.92 3.92 3.92 3.92 3.92 3.92 4.49 6.16 7.66 7.74 GDT RMS_ALL_AT 25.32 36.21 47.95 47.95 25.66 25.53 40.04 39.91 39.91 41.85 41.75 41.75 41.75 41.75 41.75 41.75 42.37 38.45 26.49 26.38 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 66.889 0 0.033 0.061 68.644 0.000 0.000 - LGA V 3 V 3 61.251 0 0.098 0.094 63.243 0.000 0.000 56.765 LGA Q 4 Q 4 63.461 0 0.022 0.834 69.780 0.000 0.000 69.673 LGA G 5 G 5 60.743 0 0.093 0.093 65.001 0.000 0.000 - LGA P 6 P 6 61.409 0 0.711 0.613 61.743 0.000 0.000 61.140 LGA W 7 W 7 61.854 0 0.329 1.331 65.606 0.000 0.000 65.037 LGA V 8 V 8 61.081 0 0.658 0.664 61.081 0.000 0.000 60.003 LGA G 9 G 9 59.940 0 0.535 0.535 60.714 0.000 0.000 - LGA S 10 S 10 62.944 0 0.624 0.881 65.856 0.000 0.000 65.856 LGA S 11 S 11 63.412 0 0.624 0.760 64.059 0.000 0.000 64.023 LGA Y 12 Y 12 57.753 0 0.645 1.356 59.782 0.000 0.000 46.059 LGA V 13 V 13 56.002 0 0.599 0.588 56.603 0.000 0.000 56.278 LGA A 14 A 14 56.683 0 0.640 0.614 58.361 0.000 0.000 - LGA E 15 E 15 56.333 0 0.639 0.911 61.193 0.000 0.000 60.983 LGA T 16 T 16 50.585 0 0.710 1.361 52.841 0.000 0.000 46.877 LGA G 17 G 17 50.522 0 0.732 0.732 50.522 0.000 0.000 - LGA Q 18 Q 18 46.080 0 0.073 0.816 48.016 0.000 0.000 44.534 LGA N 19 N 19 41.773 0 0.670 1.192 43.235 0.000 0.000 40.104 LGA W 20 W 20 35.511 0 0.037 1.156 37.462 0.000 0.000 33.674 LGA A 21 A 21 33.436 0 0.659 0.621 34.162 0.000 0.000 - LGA S 22 S 22 29.573 0 0.636 0.632 30.450 0.000 0.000 26.098 LGA L 23 L 23 32.948 0 0.607 1.123 34.671 0.000 0.000 33.531 LGA A 24 A 24 32.758 0 0.628 0.606 32.758 0.000 0.000 - LGA A 25 A 25 28.148 0 0.616 0.601 29.392 0.000 0.000 - LGA N 26 N 26 25.871 0 0.631 1.333 27.093 0.000 0.000 23.195 LGA E 27 E 27 25.936 0 0.660 0.771 26.949 0.000 0.000 24.674 LGA L 28 L 28 25.179 0 0.576 0.517 28.859 0.000 0.000 28.535 LGA R 29 R 29 19.884 0 0.548 1.374 24.823 0.000 0.000 24.823 LGA V 30 V 30 14.980 0 0.032 0.108 18.589 0.000 0.000 14.000 LGA T 31 T 31 8.161 0 0.707 1.410 10.653 0.000 0.000 8.726 LGA E 32 E 32 3.069 0 0.067 1.187 5.464 18.636 14.949 5.464 LGA R 33 R 33 2.178 0 0.503 1.987 7.585 25.000 10.248 6.428 LGA P 34 P 34 3.912 0 0.608 0.584 5.301 11.364 8.831 5.301 LGA F 35 F 35 3.414 0 0.563 1.304 11.476 10.000 4.628 11.476 LGA W 36 W 36 5.539 0 0.602 0.916 16.734 6.818 1.948 16.734 LGA I 37 I 37 3.320 0 0.103 0.395 6.049 14.545 7.727 4.555 LGA S 38 S 38 3.145 0 0.180 0.176 3.916 18.636 16.061 3.888 LGA S 39 S 39 3.624 0 0.284 0.283 5.684 20.455 13.636 5.684 LGA F 40 F 40 2.746 0 0.643 1.449 12.186 46.818 17.025 12.186 LGA I 41 I 41 1.884 0 0.084 0.134 8.130 52.273 26.818 8.130 LGA G 42 G 42 2.059 0 0.714 0.714 3.390 37.273 37.273 - LGA R 43 R 43 7.506 0 0.135 1.237 13.216 0.000 0.000 13.216 LGA S 44 S 44 10.641 0 0.662 0.987 14.093 0.000 0.000 9.615 LGA K 45 K 45 15.242 0 0.581 0.791 16.414 0.000 0.000 15.608 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 21.524 21.570 21.581 5.950 3.617 0.364 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 10 3.01 18.182 17.916 0.322 LGA_LOCAL RMSD: 3.008 Number of atoms: 10 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 39.907 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 21.524 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.343747 * X + 0.793686 * Y + -0.501897 * Z + 19.435602 Y_new = 0.819001 * X + -0.008096 * Y + -0.573735 * Z + -4.249786 Z_new = -0.459429 * X + -0.608274 * Y + -0.647247 * Z + 98.262230 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.968182 0.477352 -2.387226 [DEG: 112.7685 27.3503 -136.7780 ] ZXZ: -0.718710 2.274763 -2.494709 [DEG: -41.1791 130.3343 -142.9363 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS471_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS471_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 10 3.01 17.916 21.52 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS471_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 1SRP_A 1GO7_P 1OMJ_A 4PEU_A 3P4G_A ATOM 9 N ALA 2 -53.416 40.083 -7.983 1.00 0.49 N ATOM 10 CA ALA 2 -52.819 38.789 -7.889 1.00 0.49 C ATOM 11 CB ALA 2 -53.819 37.642 -8.109 1.00 0.49 C ATOM 12 C ALA 2 -51.773 38.679 -8.944 1.00 0.49 C ATOM 13 O ALA 2 -51.879 39.279 -10.013 1.00 0.49 O ATOM 14 N VAL 3 -50.708 37.914 -8.642 1.00 0.49 N ATOM 15 CA VAL 3 -49.671 37.692 -9.603 1.00 0.49 C ATOM 16 CB VAL 3 -48.328 37.409 -8.992 1.00 0.49 C ATOM 17 CG1 VAL 3 -47.342 37.045 -10.116 1.00 0.49 C ATOM 18 CG2 VAL 3 -47.895 38.635 -8.168 1.00 0.49 C ATOM 19 C VAL 3 -50.083 36.487 -10.372 1.00 0.49 C ATOM 20 O VAL 3 -50.711 35.580 -9.828 1.00 0.49 O ATOM 21 N GLN 4 -49.755 36.445 -11.675 1.00 0.54 N ATOM 22 CA GLN 4 -50.170 35.307 -12.434 1.00 0.54 C ATOM 23 CB GLN 4 -50.014 35.467 -13.955 1.00 0.54 C ATOM 24 CG GLN 4 -50.893 36.576 -14.538 1.00 0.54 C ATOM 25 CD GLN 4 -50.816 36.484 -16.054 1.00 0.54 C ATOM 26 OE1 GLN 4 -51.341 35.549 -16.657 1.00 0.54 O ATOM 27 NE2 GLN 4 -50.145 37.481 -16.691 1.00 0.54 N ATOM 28 C GLN 4 -49.349 34.142 -12.000 1.00 0.54 C ATOM 29 O GLN 4 -48.192 34.286 -11.606 1.00 0.54 O ATOM 30 N GLY 5 -49.963 32.947 -12.041 1.00 0.57 N ATOM 31 CA GLY 5 -49.308 31.739 -11.641 1.00 0.57 C ATOM 32 C GLY 5 -50.397 30.845 -11.158 1.00 0.57 C ATOM 33 O GLY 5 -51.576 31.151 -11.311 1.00 0.57 O ATOM 34 N PRO 6 -50.043 29.736 -10.581 1.00 0.52 N ATOM 35 CA PRO 6 -51.079 28.886 -10.077 1.00 0.52 C ATOM 36 CD PRO 6 -48.892 28.977 -11.043 1.00 0.52 C ATOM 37 CB PRO 6 -50.425 27.531 -9.828 1.00 0.52 C ATOM 38 CG PRO 6 -49.276 27.499 -10.854 1.00 0.52 C ATOM 39 C PRO 6 -51.669 29.534 -8.870 1.00 0.52 C ATOM 40 O PRO 6 -50.941 30.207 -8.142 1.00 0.52 O ATOM 41 N TRP 7 -52.984 29.369 -8.648 1.00 0.43 N ATOM 42 CA TRP 7 -53.580 29.990 -7.507 1.00 0.43 C ATOM 43 CB TRP 7 -54.624 31.050 -7.904 1.00 0.43 C ATOM 44 CG TRP 7 -55.205 31.868 -6.774 1.00 0.43 C ATOM 45 CD2 TRP 7 -56.280 32.805 -6.953 1.00 0.43 C ATOM 46 CD1 TRP 7 -54.866 31.915 -5.456 1.00 0.43 C ATOM 47 NE1 TRP 7 -55.657 32.831 -4.800 1.00 0.43 N ATOM 48 CE2 TRP 7 -56.533 33.384 -5.709 1.00 0.43 C ATOM 49 CE3 TRP 7 -56.997 33.154 -8.061 1.00 0.43 C ATOM 50 CZ2 TRP 7 -57.514 34.326 -5.557 1.00 0.43 C ATOM 51 CZ3 TRP 7 -57.982 34.102 -7.905 1.00 0.43 C ATOM 52 CH2 TRP 7 -58.236 34.677 -6.676 1.00 0.43 C ATOM 53 C TRP 7 -54.285 28.904 -6.765 1.00 0.43 C ATOM 54 O TRP 7 -55.147 28.224 -7.322 1.00 0.43 O ATOM 55 N VAL 8 -53.924 28.695 -5.486 1.00 0.45 N ATOM 56 CA VAL 8 -54.600 27.666 -4.752 1.00 0.45 C ATOM 57 CB VAL 8 -53.768 26.435 -4.546 1.00 0.45 C ATOM 58 CG1 VAL 8 -54.574 25.444 -3.686 1.00 0.45 C ATOM 59 CG2 VAL 8 -53.358 25.881 -5.921 1.00 0.45 C ATOM 60 C VAL 8 -54.920 28.201 -3.399 1.00 0.45 C ATOM 61 O VAL 8 -54.085 28.828 -2.751 1.00 0.45 O ATOM 62 N GLY 9 -56.171 27.982 -2.947 1.00 0.45 N ATOM 63 CA GLY 9 -56.564 28.398 -1.638 1.00 0.45 C ATOM 64 C GLY 9 -56.643 29.885 -1.655 1.00 0.45 C ATOM 65 O GLY 9 -56.092 30.533 -2.543 1.00 0.45 O ATOM 66 N SER 10 -57.331 30.472 -0.662 1.00 0.59 N ATOM 67 CA SER 10 -57.361 31.900 -0.629 1.00 0.59 C ATOM 68 CB SER 10 -58.676 32.500 -1.153 1.00 0.59 C ATOM 69 OG SER 10 -58.628 33.917 -1.088 1.00 0.59 O ATOM 70 C SER 10 -57.238 32.312 0.795 1.00 0.59 C ATOM 71 O SER 10 -58.120 32.043 1.609 1.00 0.59 O ATOM 72 N SER 11 -56.113 32.964 1.138 1.00 0.61 N ATOM 73 CA SER 11 -55.971 33.463 2.467 1.00 0.61 C ATOM 74 CB SER 11 -56.183 32.390 3.548 1.00 0.61 C ATOM 75 OG SER 11 -55.184 31.387 3.441 1.00 0.61 O ATOM 76 C SER 11 -54.575 33.966 2.602 1.00 0.61 C ATOM 77 O SER 11 -53.625 33.292 2.206 1.00 0.61 O ATOM 78 N TYR 12 -54.414 35.181 3.154 1.00 0.46 N ATOM 79 CA TYR 12 -53.090 35.670 3.381 1.00 0.46 C ATOM 80 CB TYR 12 -52.753 36.923 2.554 1.00 0.46 C ATOM 81 CG TYR 12 -51.352 37.322 2.863 1.00 0.46 C ATOM 82 CD1 TYR 12 -50.305 36.641 2.291 1.00 0.46 C ATOM 83 CD2 TYR 12 -51.087 38.377 3.707 1.00 0.46 C ATOM 84 CE1 TYR 12 -49.007 36.998 2.561 1.00 0.46 C ATOM 85 CE2 TYR 12 -49.787 38.738 3.980 1.00 0.46 C ATOM 86 CZ TYR 12 -48.746 38.048 3.406 1.00 0.46 C ATOM 87 OH TYR 12 -47.413 38.414 3.683 1.00 0.46 O ATOM 88 C TYR 12 -53.057 36.051 4.820 1.00 0.46 C ATOM 89 O TYR 12 -53.798 36.932 5.251 1.00 0.46 O ATOM 90 N VAL 13 -52.205 35.386 5.618 1.00 0.49 N ATOM 91 CA VAL 13 -52.194 35.739 7.004 1.00 0.49 C ATOM 92 CB VAL 13 -52.982 34.791 7.861 1.00 0.49 C ATOM 93 CG1 VAL 13 -52.768 35.159 9.338 1.00 0.49 C ATOM 94 CG2 VAL 13 -54.453 34.842 7.415 1.00 0.49 C ATOM 95 C VAL 13 -50.787 35.700 7.490 1.00 0.49 C ATOM 96 O VAL 13 -50.013 34.811 7.137 1.00 0.49 O ATOM 97 N ALA 14 -50.421 36.701 8.309 1.00 0.50 N ATOM 98 CA ALA 14 -49.131 36.709 8.924 1.00 0.50 C ATOM 99 CB ALA 14 -48.114 37.620 8.216 1.00 0.50 C ATOM 100 C ALA 14 -49.356 37.266 10.285 1.00 0.50 C ATOM 101 O ALA 14 -50.086 38.243 10.449 1.00 0.50 O ATOM 102 N GLU 15 -48.747 36.653 11.315 1.00 0.48 N ATOM 103 CA GLU 15 -48.963 37.194 12.620 1.00 0.48 C ATOM 104 CB GLU 15 -49.616 36.206 13.598 1.00 0.48 C ATOM 105 CG GLU 15 -50.182 36.869 14.855 1.00 0.48 C ATOM 106 CD GLU 15 -51.438 37.637 14.456 1.00 0.48 C ATOM 107 OE1 GLU 15 -51.488 38.138 13.299 1.00 0.48 O ATOM 108 OE2 GLU 15 -52.360 37.744 15.308 1.00 0.48 O ATOM 109 C GLU 15 -47.627 37.560 13.163 1.00 0.48 C ATOM 110 O GLU 15 -46.728 36.725 13.252 1.00 0.48 O ATOM 111 N THR 16 -47.462 38.842 13.530 1.00 0.46 N ATOM 112 CA THR 16 -46.211 39.283 14.058 1.00 0.46 C ATOM 113 CB THR 16 -45.367 40.023 13.060 1.00 0.46 C ATOM 114 OG1 THR 16 -44.094 40.321 13.615 1.00 0.46 O ATOM 115 CG2 THR 16 -46.095 41.318 12.660 1.00 0.46 C ATOM 116 C THR 16 -46.512 40.218 15.177 1.00 0.46 C ATOM 117 O THR 16 -47.668 40.549 15.437 1.00 0.46 O ATOM 118 N GLY 17 -45.459 40.651 15.888 1.00 0.47 N ATOM 119 CA GLY 17 -45.636 41.560 16.976 1.00 0.47 C ATOM 120 C GLY 17 -44.546 42.564 16.854 1.00 0.47 C ATOM 121 O GLY 17 -43.695 42.460 15.970 1.00 0.47 O ATOM 122 N GLN 18 -44.533 43.571 17.745 1.00 0.48 N ATOM 123 CA GLN 18 -43.495 44.544 17.630 1.00 0.48 C ATOM 124 CB GLN 18 -43.582 45.670 18.674 1.00 0.48 C ATOM 125 CG GLN 18 -42.516 46.756 18.504 1.00 0.48 C ATOM 126 CD GLN 18 -42.910 47.617 17.310 1.00 0.48 C ATOM 127 OE1 GLN 18 -42.285 48.638 17.030 1.00 0.48 O ATOM 128 NE2 GLN 18 -43.983 47.195 16.588 1.00 0.48 N ATOM 129 C GLN 18 -42.217 43.815 17.860 1.00 0.48 C ATOM 130 O GLN 18 -42.001 43.228 18.920 1.00 0.48 O ATOM 131 N ASN 19 -41.337 43.819 16.842 1.00 0.48 N ATOM 132 CA ASN 19 -40.080 43.153 16.962 1.00 0.48 C ATOM 133 CB ASN 19 -40.096 41.719 16.402 1.00 0.48 C ATOM 134 CG ASN 19 -38.787 41.040 16.774 1.00 0.48 C ATOM 135 OD1 ASN 19 -37.780 41.172 16.079 1.00 0.48 O ATOM 136 ND2 ASN 19 -38.798 40.293 17.911 1.00 0.48 N ATOM 137 C ASN 19 -39.115 43.943 16.151 1.00 0.48 C ATOM 138 O ASN 19 -39.514 44.729 15.293 1.00 0.48 O ATOM 139 N TRP 20 -37.808 43.772 16.411 1.00 0.46 N ATOM 140 CA TRP 20 -36.879 44.517 15.623 1.00 0.46 C ATOM 141 CB TRP 20 -35.764 45.197 16.433 1.00 0.46 C ATOM 142 CG TRP 20 -34.812 45.954 15.546 1.00 0.46 C ATOM 143 CD2 TRP 20 -35.150 47.166 14.859 1.00 0.46 C ATOM 144 CD1 TRP 20 -33.538 45.637 15.169 1.00 0.46 C ATOM 145 NE1 TRP 20 -33.060 46.584 14.298 1.00 0.46 N ATOM 146 CE2 TRP 20 -34.045 47.533 14.092 1.00 0.46 C ATOM 147 CE3 TRP 20 -36.299 47.910 14.856 1.00 0.46 C ATOM 148 CZ2 TRP 20 -34.067 48.649 13.312 1.00 0.46 C ATOM 149 CZ3 TRP 20 -36.314 49.044 14.075 1.00 0.46 C ATOM 150 CH2 TRP 20 -35.219 49.407 13.318 1.00 0.46 C ATOM 151 C TRP 20 -36.236 43.590 14.652 1.00 0.46 C ATOM 152 O TRP 20 -35.590 42.613 15.030 1.00 0.46 O ATOM 153 N ALA 21 -36.420 43.886 13.352 1.00 0.49 N ATOM 154 CA ALA 21 -35.830 43.096 12.319 1.00 0.49 C ATOM 155 CB ALA 21 -36.791 42.066 11.702 1.00 0.49 C ATOM 156 C ALA 21 -35.459 44.045 11.236 1.00 0.49 C ATOM 157 O ALA 21 -36.067 45.106 11.091 1.00 0.49 O ATOM 158 N SER 22 -34.425 43.701 10.453 1.00 0.52 N ATOM 159 CA SER 22 -34.038 44.562 9.379 1.00 0.52 C ATOM 160 CB SER 22 -32.616 45.130 9.517 1.00 0.52 C ATOM 161 OG SER 22 -31.663 44.080 9.420 1.00 0.52 O ATOM 162 C SER 22 -34.060 43.725 8.149 1.00 0.52 C ATOM 163 O SER 22 -33.800 42.524 8.204 1.00 0.52 O ATOM 164 N LEU 23 -34.389 44.337 6.998 1.00 0.54 N ATOM 165 CA LEU 23 -34.426 43.548 5.805 1.00 0.54 C ATOM 166 CB LEU 23 -35.622 43.900 4.894 1.00 0.54 C ATOM 167 CG LEU 23 -35.810 42.998 3.655 1.00 0.54 C ATOM 168 CD1 LEU 23 -34.675 43.157 2.630 1.00 0.54 C ATOM 169 CD2 LEU 23 -36.051 41.537 4.064 1.00 0.54 C ATOM 170 C LEU 23 -33.165 43.836 5.063 1.00 0.54 C ATOM 171 O LEU 23 -33.009 44.899 4.463 1.00 0.54 O ATOM 172 N ALA 24 -32.214 42.887 5.115 1.00 0.73 N ATOM 173 CA ALA 24 -30.990 43.047 4.395 1.00 0.73 C ATOM 174 CB ALA 24 -30.308 44.407 4.618 1.00 0.73 C ATOM 175 C ALA 24 -30.059 42.003 4.902 1.00 0.73 C ATOM 176 O ALA 24 -30.283 41.422 5.964 1.00 0.73 O ATOM 177 N ALA 25 -28.990 41.719 4.138 1.00 0.72 N ATOM 178 CA ALA 25 -28.039 40.769 4.619 1.00 0.72 C ATOM 179 CB ALA 25 -27.792 39.606 3.644 1.00 0.72 C ATOM 180 C ALA 25 -26.752 41.505 4.772 1.00 0.72 C ATOM 181 O ALA 25 -26.274 42.136 3.832 1.00 0.72 O ATOM 182 N ASN 26 -26.165 41.466 5.982 1.00 0.70 N ATOM 183 CA ASN 26 -24.913 42.137 6.160 1.00 0.70 C ATOM 184 CB ASN 26 -25.045 43.669 6.204 1.00 0.70 C ATOM 185 CG ASN 26 -23.668 44.284 5.997 1.00 0.70 C ATOM 186 OD1 ASN 26 -23.449 45.460 6.284 1.00 0.70 O ATOM 187 ND2 ASN 26 -22.711 43.472 5.471 1.00 0.70 N ATOM 188 C ASN 26 -24.353 41.690 7.470 1.00 0.70 C ATOM 189 O ASN 26 -25.085 41.211 8.337 1.00 0.70 O ATOM 190 N GLU 27 -23.023 41.815 7.636 1.00 0.61 N ATOM 191 CA GLU 27 -22.410 41.434 8.874 1.00 0.61 C ATOM 192 CB GLU 27 -21.362 40.316 8.725 1.00 0.61 C ATOM 193 CG GLU 27 -20.597 40.024 10.019 1.00 0.61 C ATOM 194 CD GLU 27 -21.540 39.349 11.004 1.00 0.61 C ATOM 195 OE1 GLU 27 -22.678 38.998 10.592 1.00 0.61 O ATOM 196 OE2 GLU 27 -21.133 39.173 12.184 1.00 0.61 O ATOM 197 C GLU 27 -21.692 42.626 9.412 1.00 0.61 C ATOM 198 O GLU 27 -20.943 43.287 8.694 1.00 0.61 O ATOM 199 N LEU 28 -21.926 42.942 10.700 1.00 0.55 N ATOM 200 CA LEU 28 -21.217 44.032 11.301 1.00 0.55 C ATOM 201 CB LEU 28 -22.125 45.160 11.822 1.00 0.55 C ATOM 202 CG LEU 28 -22.901 45.916 10.724 1.00 0.55 C ATOM 203 CD1 LEU 28 -23.778 47.026 11.326 1.00 0.55 C ATOM 204 CD2 LEU 28 -21.959 46.443 9.628 1.00 0.55 C ATOM 205 C LEU 28 -20.491 43.472 12.479 1.00 0.55 C ATOM 206 O LEU 28 -21.098 42.873 13.365 1.00 0.55 O ATOM 207 N ARG 29 -19.153 43.634 12.508 1.00 0.55 N ATOM 208 CA ARG 29 -18.403 43.137 13.622 1.00 0.55 C ATOM 209 CB ARG 29 -17.834 41.728 13.383 1.00 0.55 C ATOM 210 CG ARG 29 -17.110 41.141 14.594 1.00 0.55 C ATOM 211 CD ARG 29 -16.416 39.809 14.298 1.00 0.55 C ATOM 212 NE ARG 29 -17.456 38.860 13.814 1.00 0.55 N ATOM 213 CZ ARG 29 -17.183 37.524 13.741 1.00 0.55 C ATOM 214 NH1 ARG 29 -15.963 37.052 14.130 1.00 0.55 N ATOM 215 NH2 ARG 29 -18.134 36.660 13.276 1.00 0.55 N ATOM 216 C ARG 29 -17.239 44.053 13.810 1.00 0.55 C ATOM 217 O ARG 29 -16.653 44.528 12.838 1.00 0.55 O ATOM 218 N VAL 30 -16.876 44.340 15.076 1.00 0.53 N ATOM 219 CA VAL 30 -15.744 45.189 15.298 1.00 0.53 C ATOM 220 CB VAL 30 -16.028 46.346 16.216 1.00 0.53 C ATOM 221 CG1 VAL 30 -14.731 47.149 16.415 1.00 0.53 C ATOM 222 CG2 VAL 30 -17.188 47.168 15.629 1.00 0.53 C ATOM 223 C VAL 30 -14.701 44.353 15.962 1.00 0.53 C ATOM 224 O VAL 30 -14.907 43.844 17.063 1.00 0.53 O ATOM 225 N THR 31 -13.548 44.175 15.292 1.00 0.52 N ATOM 226 CA THR 31 -12.506 43.394 15.889 1.00 0.52 C ATOM 227 CB THR 31 -12.620 41.923 15.620 1.00 0.52 C ATOM 228 OG1 THR 31 -11.709 41.202 16.436 1.00 0.52 O ATOM 229 CG2 THR 31 -12.315 41.669 14.134 1.00 0.52 C ATOM 230 C THR 31 -11.211 43.848 15.302 1.00 0.52 C ATOM 231 O THR 31 -11.175 44.736 14.451 1.00 0.52 O ATOM 232 N GLU 32 -10.102 43.247 15.773 1.00 0.55 N ATOM 233 CA GLU 32 -8.810 43.582 15.253 1.00 0.55 C ATOM 234 CB GLU 32 -7.648 43.046 16.109 1.00 0.55 C ATOM 235 CG GLU 32 -6.265 43.425 15.574 1.00 0.55 C ATOM 236 CD GLU 32 -5.223 42.872 16.531 1.00 0.55 C ATOM 237 OE1 GLU 32 -5.620 42.338 17.602 1.00 0.55 O ATOM 238 OE2 GLU 32 -4.011 42.977 16.205 1.00 0.55 O ATOM 239 C GLU 32 -8.726 42.965 13.898 1.00 0.55 C ATOM 240 O GLU 32 -9.324 41.921 13.643 1.00 0.55 O ATOM 241 N ARG 33 -7.990 43.608 12.972 1.00 0.64 N ATOM 242 CA ARG 33 -7.962 43.056 11.653 1.00 0.64 C ATOM 243 CB ARG 33 -9.124 43.549 10.766 1.00 0.64 C ATOM 244 CG ARG 33 -9.156 42.934 9.366 1.00 0.64 C ATOM 245 CD ARG 33 -9.582 41.465 9.356 1.00 0.64 C ATOM 246 NE ARG 33 -8.515 40.683 10.039 1.00 0.64 N ATOM 247 CZ ARG 33 -7.495 40.146 9.310 1.00 0.64 C ATOM 248 NH1 ARG 33 -7.469 40.305 7.953 1.00 0.64 N ATOM 249 NH2 ARG 33 -6.501 39.451 9.934 1.00 0.64 N ATOM 250 C ARG 33 -6.665 43.403 10.990 1.00 0.64 C ATOM 251 O ARG 33 -5.747 42.587 10.946 1.00 0.64 O ATOM 252 N PRO 34 -6.574 44.609 10.493 1.00 0.63 N ATOM 253 CA PRO 34 -5.469 45.001 9.657 1.00 0.63 C ATOM 254 CD PRO 34 -7.116 45.754 11.214 1.00 0.63 C ATOM 255 CB PRO 34 -5.619 46.508 9.471 1.00 0.63 C ATOM 256 CG PRO 34 -6.245 46.951 10.806 1.00 0.63 C ATOM 257 C PRO 34 -4.126 44.677 10.227 1.00 0.63 C ATOM 258 O PRO 34 -3.228 44.362 9.450 1.00 0.63 O ATOM 259 N PHE 35 -3.930 44.776 11.554 1.00 0.60 N ATOM 260 CA PHE 35 -2.622 44.486 12.065 1.00 0.60 C ATOM 261 CB PHE 35 -2.497 44.755 13.575 1.00 0.60 C ATOM 262 CG PHE 35 -2.510 46.233 13.754 1.00 0.60 C ATOM 263 CD1 PHE 35 -3.696 46.933 13.786 1.00 0.60 C ATOM 264 CD2 PHE 35 -1.330 46.926 13.894 1.00 0.60 C ATOM 265 CE1 PHE 35 -3.701 48.298 13.948 1.00 0.60 C ATOM 266 CE2 PHE 35 -1.329 48.291 14.057 1.00 0.60 C ATOM 267 CZ PHE 35 -2.515 48.980 14.088 1.00 0.60 C ATOM 268 C PHE 35 -2.310 43.046 11.812 1.00 0.60 C ATOM 269 O PHE 35 -1.249 42.713 11.286 1.00 0.60 O ATOM 270 N TRP 36 -3.252 42.151 12.157 1.00 0.54 N ATOM 271 CA TRP 36 -3.024 40.747 11.988 1.00 0.54 C ATOM 272 CB TRP 36 -4.157 39.858 12.522 1.00 0.54 C ATOM 273 CG TRP 36 -4.171 39.676 14.020 1.00 0.54 C ATOM 274 CD2 TRP 36 -4.950 38.671 14.678 1.00 0.54 C ATOM 275 CD1 TRP 36 -3.476 40.331 14.994 1.00 0.54 C ATOM 276 NE1 TRP 36 -3.775 39.790 16.223 1.00 0.54 N ATOM 277 CE2 TRP 36 -4.682 38.767 16.042 1.00 0.54 C ATOM 278 CE3 TRP 36 -5.815 37.739 14.181 1.00 0.54 C ATOM 279 CZ2 TRP 36 -5.278 37.926 16.938 1.00 0.54 C ATOM 280 CZ3 TRP 36 -6.420 36.898 15.088 1.00 0.54 C ATOM 281 CH2 TRP 36 -6.157 36.990 16.439 1.00 0.54 C ATOM 282 C TRP 36 -2.871 40.434 10.538 1.00 0.54 C ATOM 283 O TRP 36 -1.983 39.676 10.150 1.00 0.54 O ATOM 284 N ILE 37 -3.722 41.028 9.688 1.00 0.60 N ATOM 285 CA ILE 37 -3.677 40.674 8.304 1.00 0.60 C ATOM 286 CB ILE 37 -4.717 41.369 7.467 1.00 0.60 C ATOM 287 CG1 ILE 37 -4.751 40.749 6.062 1.00 0.60 C ATOM 288 CG2 ILE 37 -4.441 42.882 7.472 1.00 0.60 C ATOM 289 CD1 ILE 37 -5.220 39.296 6.055 1.00 0.60 C ATOM 290 C ILE 37 -2.330 41.002 7.764 1.00 0.60 C ATOM 291 O ILE 37 -1.753 40.212 7.019 1.00 0.60 O ATOM 292 N SER 38 -1.782 42.175 8.123 1.00 0.72 N ATOM 293 CA SER 38 -0.488 42.495 7.607 1.00 0.72 C ATOM 294 CB SER 38 0.031 43.861 8.083 1.00 0.72 C ATOM 295 OG SER 38 0.240 43.851 9.488 1.00 0.72 O ATOM 296 C SER 38 0.443 41.445 8.113 1.00 0.72 C ATOM 297 O SER 38 1.181 40.838 7.340 1.00 0.72 O ATOM 298 N SER 39 0.395 41.193 9.436 1.00 0.71 N ATOM 299 CA SER 39 1.233 40.214 10.060 1.00 0.71 C ATOM 300 CB SER 39 0.856 38.753 9.733 1.00 0.71 C ATOM 301 OG SER 39 1.026 38.474 8.351 1.00 0.71 O ATOM 302 C SER 39 2.636 40.488 9.645 1.00 0.71 C ATOM 303 O SER 39 3.393 39.573 9.321 1.00 0.71 O ATOM 304 N PHE 40 3.027 41.776 9.648 1.00 0.60 N ATOM 305 CA PHE 40 4.366 42.093 9.262 1.00 0.60 C ATOM 306 CB PHE 40 4.553 43.542 8.787 1.00 0.60 C ATOM 307 CG PHE 40 5.993 43.714 8.439 1.00 0.60 C ATOM 308 CD1 PHE 40 6.473 43.286 7.224 1.00 0.60 C ATOM 309 CD2 PHE 40 6.863 44.307 9.328 1.00 0.60 C ATOM 310 CE1 PHE 40 7.799 43.444 6.898 1.00 0.60 C ATOM 311 CE2 PHE 40 8.191 44.469 9.006 1.00 0.60 C ATOM 312 CZ PHE 40 8.662 44.031 7.791 1.00 0.60 C ATOM 313 C PHE 40 5.242 41.915 10.451 1.00 0.60 C ATOM 314 O PHE 40 5.015 42.515 11.501 1.00 0.60 O ATOM 315 N ILE 41 6.276 41.070 10.305 1.00 0.58 N ATOM 316 CA ILE 41 7.202 40.881 11.375 1.00 0.58 C ATOM 317 CB ILE 41 7.260 39.461 11.856 1.00 0.58 C ATOM 318 CG1 ILE 41 5.889 39.036 12.411 1.00 0.58 C ATOM 319 CG2 ILE 41 8.400 39.346 12.881 1.00 0.58 C ATOM 320 CD1 ILE 41 5.765 37.534 12.659 1.00 0.58 C ATOM 321 C ILE 41 8.537 41.234 10.808 1.00 0.58 C ATOM 322 O ILE 41 8.912 40.732 9.750 1.00 0.58 O ATOM 323 N GLY 42 9.276 42.141 11.483 1.00 0.56 N ATOM 324 CA GLY 42 10.562 42.546 10.990 1.00 0.56 C ATOM 325 C GLY 42 11.622 41.725 11.659 1.00 0.56 C ATOM 326 O GLY 42 11.325 40.820 12.434 1.00 0.56 O ATOM 327 N ARG 43 12.905 42.027 11.363 1.00 0.53 N ATOM 328 CA ARG 43 13.971 41.309 12.000 1.00 0.53 C ATOM 329 CB ARG 43 14.800 40.453 11.028 1.00 0.53 C ATOM 330 CG ARG 43 13.990 39.391 10.280 1.00 0.53 C ATOM 331 CD ARG 43 13.555 38.206 11.142 1.00 0.53 C ATOM 332 NE ARG 43 12.805 37.277 10.251 1.00 0.53 N ATOM 333 CZ ARG 43 11.464 37.447 10.064 1.00 0.53 C ATOM 334 NH1 ARG 43 10.812 38.445 10.728 1.00 0.53 N ATOM 335 NH2 ARG 43 10.779 36.627 9.214 1.00 0.53 N ATOM 336 C ARG 43 14.913 42.319 12.576 1.00 0.53 C ATOM 337 O ARG 43 15.494 43.126 11.852 1.00 0.53 O ATOM 338 N SER 44 15.061 42.313 13.914 1.00 0.53 N ATOM 339 CA SER 44 15.963 43.204 14.583 1.00 0.53 C ATOM 340 CB SER 44 15.656 43.359 16.081 1.00 0.53 C ATOM 341 OG SER 44 16.584 44.252 16.680 1.00 0.53 O ATOM 342 C SER 44 17.352 42.667 14.465 1.00 0.53 C ATOM 343 O SER 44 18.324 43.364 14.752 1.00 0.53 O ATOM 344 N LYS 45 17.486 41.404 14.024 1.00 0.52 N ATOM 345 CA LYS 45 18.766 40.763 14.033 1.00 0.52 C ATOM 346 CB LYS 45 18.705 39.335 13.470 1.00 0.52 C ATOM 347 CG LYS 45 17.885 38.395 14.356 1.00 0.52 C ATOM 348 CD LYS 45 17.529 37.070 13.682 1.00 0.52 C ATOM 349 CE LYS 45 16.715 36.129 14.573 1.00 0.52 C ATOM 350 NZ LYS 45 16.338 34.915 13.818 1.00 0.52 N ATOM 351 C LYS 45 19.750 41.547 13.227 1.00 0.52 C ATOM 352 O LYS 45 20.849 41.818 13.706 1.00 0.52 O TER END