####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS470_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS470_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.97 14.71 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.89 15.74 LCS_AVERAGE: 37.09 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 27 - 36 1.99 13.62 LONGEST_CONTINUOUS_SEGMENT: 10 28 - 37 1.93 13.80 LCS_AVERAGE: 15.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.60 12.48 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.96 20.02 LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.53 17.33 LONGEST_CONTINUOUS_SEGMENT: 4 21 - 24 0.86 18.39 LONGEST_CONTINUOUS_SEGMENT: 4 23 - 26 0.68 19.31 LONGEST_CONTINUOUS_SEGMENT: 4 28 - 31 0.97 15.62 LONGEST_CONTINUOUS_SEGMENT: 4 30 - 33 0.99 15.07 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.49 14.62 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.66 14.06 LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.83 14.14 LCS_AVERAGE: 8.06 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 4 5 6 6 8 11 12 13 14 15 16 17 18 19 21 22 24 24 LCS_GDT V 3 V 3 4 6 14 3 4 4 5 6 8 10 10 10 13 14 15 15 16 18 19 21 22 24 24 LCS_GDT Q 4 Q 4 4 6 14 3 4 4 6 7 8 10 10 10 13 14 15 15 16 18 19 21 22 24 24 LCS_GDT G 5 G 5 4 6 14 0 4 4 5 7 7 10 10 10 13 14 15 15 16 18 19 21 21 24 24 LCS_GDT P 6 P 6 4 6 14 0 3 4 5 6 6 7 8 9 11 13 13 14 16 18 19 21 21 24 24 LCS_GDT W 7 W 7 4 6 14 1 3 4 5 6 6 7 8 9 11 13 13 14 16 18 19 21 22 24 24 LCS_GDT V 8 V 8 4 5 14 1 3 4 5 5 6 7 8 9 11 13 13 15 16 18 19 21 22 24 24 LCS_GDT G 9 G 9 4 5 14 0 3 4 4 5 6 6 8 9 11 13 13 14 15 18 19 21 22 24 24 LCS_GDT S 10 S 10 3 5 14 1 3 3 5 5 6 6 8 9 10 13 13 14 15 15 18 21 21 24 24 LCS_GDT S 11 S 11 3 4 14 3 3 4 5 5 6 6 8 10 11 11 12 13 15 15 18 20 21 24 24 LCS_GDT Y 12 Y 12 3 4 14 3 3 4 5 5 5 5 8 9 11 11 11 11 13 14 16 21 21 24 24 LCS_GDT V 13 V 13 3 4 14 3 3 4 4 4 5 6 8 10 11 13 13 14 15 15 18 21 21 24 24 LCS_GDT A 14 A 14 3 4 17 3 3 4 4 4 6 7 8 10 11 13 13 15 16 16 18 21 21 24 24 LCS_GDT E 15 E 15 3 7 17 3 3 3 4 6 6 7 8 10 14 14 15 16 17 18 19 21 21 24 25 LCS_GDT T 16 T 16 3 7 17 3 3 4 6 7 8 10 11 13 14 14 15 16 17 18 19 21 22 24 25 LCS_GDT G 17 G 17 3 7 17 3 3 4 6 7 8 10 11 13 14 14 15 16 17 18 19 21 22 24 25 LCS_GDT Q 18 Q 18 3 7 17 0 3 3 4 6 6 7 8 12 14 14 15 15 17 17 19 21 22 24 25 LCS_GDT N 19 N 19 4 7 17 3 4 4 5 6 7 8 10 12 14 14 15 16 17 17 19 21 22 24 25 LCS_GDT W 20 W 20 4 7 17 3 4 4 5 6 7 8 10 12 14 14 15 16 17 17 19 21 22 24 25 LCS_GDT A 21 A 21 4 7 17 3 4 4 5 6 6 7 10 12 14 14 15 16 17 17 19 21 22 24 25 LCS_GDT S 22 S 22 4 4 17 3 4 4 5 6 7 8 10 12 14 14 15 16 17 17 18 20 21 23 24 LCS_GDT L 23 L 23 4 5 17 3 4 4 5 6 6 7 10 11 14 14 15 16 17 18 19 21 22 24 25 LCS_GDT A 24 A 24 4 5 18 3 4 4 5 5 6 7 9 9 10 11 13 15 17 18 19 21 22 24 25 LCS_GDT A 25 A 25 4 5 18 3 4 4 5 6 7 8 10 12 14 14 15 16 17 18 19 21 22 24 25 LCS_GDT N 26 N 26 4 5 18 3 4 4 5 6 7 8 10 12 14 15 16 17 17 18 19 21 22 24 25 LCS_GDT E 27 E 27 3 10 18 3 3 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT L 28 L 28 4 10 18 3 4 5 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT R 29 R 29 4 10 18 3 3 4 5 6 10 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT V 30 V 30 4 10 18 4 6 6 7 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT T 31 T 31 4 10 18 4 6 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT E 32 E 32 4 10 18 4 6 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT R 33 R 33 4 10 18 3 4 5 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT P 34 P 34 4 10 18 4 6 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT F 35 F 35 4 10 18 3 4 5 7 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT W 36 W 36 4 10 18 3 6 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT I 37 I 37 4 10 18 3 4 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT S 38 S 38 4 9 18 1 6 6 7 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 4 8 9 12 13 15 15 16 17 17 18 19 21 22 24 25 LCS_GDT F 40 F 40 3 4 18 3 3 3 4 4 6 7 9 12 15 15 16 17 17 18 19 21 21 24 25 LCS_GDT I 41 I 41 3 5 18 3 3 3 4 6 6 7 11 12 15 15 16 17 17 18 19 21 21 24 24 LCS_GDT G 42 G 42 3 5 18 3 3 3 5 5 6 7 9 11 13 13 16 17 17 17 18 19 20 21 23 LCS_GDT R 43 R 43 3 5 17 0 3 3 4 4 5 7 7 9 10 11 13 14 16 16 17 19 20 21 22 LCS_GDT S 44 S 44 3 5 15 1 3 3 4 4 5 5 7 9 10 11 12 12 13 15 15 17 20 21 22 LCS_GDT K 45 K 45 0 5 10 0 0 3 4 4 5 5 7 7 10 10 12 12 12 12 13 14 15 15 16 LCS_AVERAGE LCS_A: 20.08 ( 8.06 15.08 37.09 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 9 11 11 12 13 15 15 16 17 17 18 19 21 22 24 25 GDT PERCENT_AT 9.09 13.64 13.64 18.18 20.45 25.00 25.00 27.27 29.55 34.09 34.09 36.36 38.64 38.64 40.91 43.18 47.73 50.00 54.55 56.82 GDT RMS_LOCAL 0.10 0.58 0.58 1.44 1.54 1.94 1.94 2.18 2.80 3.56 3.56 3.96 4.45 4.45 5.27 5.12 5.86 6.35 6.63 7.07 GDT RMS_ALL_AT 16.02 15.51 15.51 13.52 13.50 13.88 13.88 13.97 14.51 15.46 15.46 15.16 15.92 15.92 11.88 14.33 11.83 13.36 11.74 13.60 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.969 0 0.101 0.151 9.853 0.000 0.000 - LGA V 3 V 3 10.442 0 0.049 0.077 11.990 0.000 0.000 11.836 LGA Q 4 Q 4 16.057 0 0.139 0.890 18.601 0.000 0.000 17.729 LGA G 5 G 5 20.450 0 0.260 0.260 20.450 0.000 0.000 - LGA P 6 P 6 20.901 0 0.674 0.594 24.373 0.000 0.000 24.373 LGA W 7 W 7 19.168 0 0.362 0.281 21.444 0.000 0.000 21.427 LGA V 8 V 8 18.187 0 0.642 0.847 19.418 0.000 0.000 18.491 LGA G 9 G 9 21.194 0 0.479 0.479 21.194 0.000 0.000 - LGA S 10 S 10 23.364 0 0.675 0.868 25.974 0.000 0.000 25.572 LGA S 11 S 11 19.560 0 0.573 0.780 20.523 0.000 0.000 15.925 LGA Y 12 Y 12 18.107 0 0.161 1.012 19.870 0.000 0.000 19.870 LGA V 13 V 13 17.820 0 0.621 1.418 20.060 0.000 0.000 20.060 LGA A 14 A 14 16.996 0 0.614 0.579 16.996 0.000 0.000 - LGA E 15 E 15 12.845 0 0.630 1.427 15.328 0.000 0.000 15.328 LGA T 16 T 16 10.965 0 0.589 0.952 11.881 0.000 0.000 10.655 LGA G 17 G 17 13.923 0 0.656 0.656 17.246 0.000 0.000 - LGA Q 18 Q 18 15.484 0 0.491 0.952 22.641 0.000 0.000 22.641 LGA N 19 N 19 17.174 0 0.644 1.039 21.101 0.000 0.000 21.101 LGA W 20 W 20 19.167 0 0.048 1.149 23.904 0.000 0.000 23.314 LGA A 21 A 21 17.806 0 0.661 0.614 18.406 0.000 0.000 - LGA S 22 S 22 21.392 0 0.022 0.626 25.036 0.000 0.000 25.036 LGA L 23 L 23 16.561 0 0.626 1.399 18.541 0.000 0.000 18.541 LGA A 24 A 24 12.605 0 0.644 0.612 14.407 0.000 0.000 - LGA A 25 A 25 10.951 0 0.389 0.381 13.003 0.000 0.000 - LGA N 26 N 26 8.019 0 0.649 0.819 13.259 0.000 0.000 10.796 LGA E 27 E 27 2.244 0 0.665 1.350 6.272 30.455 14.141 5.386 LGA L 28 L 28 1.697 0 0.292 0.297 2.303 48.182 51.591 2.129 LGA R 29 R 29 3.720 0 0.562 1.592 12.850 11.818 4.298 11.813 LGA V 30 V 30 2.799 0 0.262 1.135 6.347 45.455 26.234 6.347 LGA T 31 T 31 1.666 0 0.268 1.117 3.328 52.273 48.052 2.966 LGA E 32 E 32 0.397 0 0.349 0.403 2.132 78.636 62.020 2.040 LGA R 33 R 33 2.110 0 0.660 1.132 5.495 29.091 30.909 2.630 LGA P 34 P 34 0.921 0 0.641 0.603 3.371 56.364 44.156 3.371 LGA F 35 F 35 2.470 0 0.096 1.300 12.190 36.364 13.719 12.190 LGA W 36 W 36 0.879 0 0.101 0.315 8.454 73.636 25.584 8.454 LGA I 37 I 37 2.026 0 0.664 1.444 5.688 52.273 27.500 5.357 LGA S 38 S 38 2.847 0 0.656 0.750 4.201 20.455 19.697 3.312 LGA S 39 S 39 7.504 0 0.693 0.576 9.324 0.000 0.000 7.718 LGA F 40 F 40 8.126 0 0.668 0.874 12.618 0.000 0.000 12.618 LGA I 41 I 41 11.167 0 0.158 1.037 15.010 0.000 0.000 14.354 LGA G 42 G 42 15.996 0 0.673 0.673 16.682 0.000 0.000 - LGA R 43 R 43 17.895 0 0.238 0.954 19.710 0.000 0.000 18.855 LGA S 44 S 44 17.784 0 0.651 0.570 21.362 0.000 0.000 16.507 LGA K 45 K 45 18.390 0 0.604 0.749 20.929 0.000 0.000 12.326 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.256 11.142 11.989 12.159 8.361 4.779 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.18 25.568 23.587 0.527 LGA_LOCAL RMSD: 2.178 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.971 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.256 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.162479 * X + 0.641201 * Y + -0.749974 * Z + -35.924706 Y_new = 0.207590 * X + 0.765276 * Y + 0.609310 * Z + 21.692955 Z_new = 0.964628 * X + -0.056687 * Y + -0.257448 * Z + -11.168023 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.234895 -1.304028 -2.924865 [DEG: 128.0501 -74.7153 -167.5824 ] ZXZ: -2.253078 1.831177 1.629494 [DEG: -129.0919 104.9187 93.3631 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS470_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS470_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.18 23.587 11.26 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS470_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 1923 N ALA 2 16.356 38.487 16.125 1.00 1.83 ATOM 1925 CA ALA 2 15.966 37.990 17.421 1.00 1.83 ATOM 1926 CB ALA 2 17.145 37.671 18.358 1.00 1.83 ATOM 1927 C ALA 2 15.121 39.050 18.074 1.00 1.83 ATOM 1928 O ALA 2 15.515 40.217 18.143 1.00 1.83 ATOM 1929 N VAL 3 13.920 38.647 18.541 1.00 1.83 ATOM 1931 CA VAL 3 12.984 39.537 19.173 1.00 1.83 ATOM 1932 CB VAL 3 11.557 39.370 18.648 1.00 1.83 ATOM 1933 CG1 VAL 3 10.564 40.308 19.363 1.00 1.83 ATOM 1934 CG2 VAL 3 11.559 39.636 17.133 1.00 1.83 ATOM 1935 C VAL 3 13.025 39.321 20.657 1.00 1.83 ATOM 1936 O VAL 3 12.802 38.213 21.157 1.00 1.83 ATOM 1937 N GLN 4 13.347 40.420 21.374 1.00 2.00 ATOM 1939 CA GLN 4 13.396 40.463 22.809 1.00 2.00 ATOM 1940 CB GLN 4 14.775 40.850 23.392 1.00 2.00 ATOM 1941 CG GLN 4 15.910 39.845 23.143 1.00 2.00 ATOM 1942 CD GLN 4 15.637 38.516 23.851 1.00 2.00 ATOM 1943 OE1 GLN 4 15.237 38.444 25.014 1.00 2.00 ATOM 1944 NE2 GLN 4 15.868 37.403 23.112 1.00 2.00 ATOM 1947 C GLN 4 12.424 41.563 23.094 1.00 2.00 ATOM 1948 O GLN 4 12.674 42.731 22.782 1.00 2.00 ATOM 1949 N GLY 5 11.263 41.190 23.665 1.00 2.25 ATOM 1951 CA GLY 5 10.218 42.126 23.965 1.00 2.25 ATOM 1952 C GLY 5 9.323 41.973 22.768 1.00 2.25 ATOM 1953 O GLY 5 9.646 42.547 21.724 1.00 2.25 ATOM 1954 N PRO 6 8.200 41.270 22.879 1.00 2.82 ATOM 1955 CA PRO 6 7.287 41.022 21.780 1.00 2.82 ATOM 1956 CB PRO 6 6.217 40.079 22.332 1.00 2.82 ATOM 1957 CG PRO 6 6.907 39.367 23.505 1.00 2.82 ATOM 1958 CD PRO 6 7.901 40.413 24.025 1.00 2.82 ATOM 1959 C PRO 6 6.682 42.225 21.111 1.00 2.82 ATOM 1960 O PRO 6 6.552 43.277 21.740 1.00 2.82 ATOM 1961 N TRP 7 6.332 42.051 19.816 1.00 3.60 ATOM 1963 CA TRP 7 5.741 43.051 18.952 1.00 3.60 ATOM 1964 CB TRP 7 5.460 42.483 17.545 1.00 3.60 ATOM 1965 CG TRP 7 6.674 42.111 16.722 1.00 3.60 ATOM 1966 CD1 TRP 7 7.211 40.874 16.504 1.00 3.60 ATOM 1967 NE1 TRP 7 8.285 40.963 15.645 1.00 3.60 ATOM 1969 CE2 TRP 7 8.437 42.277 15.272 1.00 3.60 ATOM 1970 CZ2 TRP 7 9.341 42.889 14.414 1.00 3.60 ATOM 1971 CH2 TRP 7 9.244 44.273 14.225 1.00 3.60 ATOM 1972 CZ3 TRP 7 8.254 45.020 14.878 1.00 3.60 ATOM 1973 CE3 TRP 7 7.336 44.404 15.737 1.00 3.60 ATOM 1974 CD2 TRP 7 7.442 43.031 15.929 1.00 3.60 ATOM 1975 C TRP 7 4.410 43.507 19.486 1.00 3.60 ATOM 1976 O TRP 7 3.607 42.689 19.942 1.00 3.60 ATOM 1977 N VAL 8 4.167 44.843 19.455 1.00 4.39 ATOM 1979 CA VAL 8 2.935 45.420 19.946 1.00 4.39 ATOM 1980 CB VAL 8 3.007 45.621 21.471 1.00 4.39 ATOM 1981 CG1 VAL 8 4.039 46.706 21.850 1.00 4.39 ATOM 1982 CG2 VAL 8 1.605 45.790 22.086 1.00 4.39 ATOM 1983 C VAL 8 2.602 46.712 19.208 1.00 4.39 ATOM 1984 O VAL 8 3.472 47.322 18.579 1.00 4.39 ATOM 1985 N GLY 9 1.311 47.133 19.268 1.00 5.25 ATOM 1987 CA GLY 9 0.811 48.353 18.681 1.00 5.25 ATOM 1988 C GLY 9 0.051 48.246 17.390 1.00 5.25 ATOM 1989 O GLY 9 0.127 47.253 16.665 1.00 5.25 ATOM 1990 N SER 10 -0.738 49.317 17.111 1.00 5.83 ATOM 1992 CA SER 10 -1.535 49.455 15.917 1.00 5.83 ATOM 1993 CB SER 10 -2.699 50.465 16.035 1.00 5.83 ATOM 1994 OG SER 10 -3.406 50.577 14.804 1.00 5.83 ATOM 1996 C SER 10 -0.586 49.910 14.844 1.00 5.83 ATOM 1997 O SER 10 0.307 50.728 15.087 1.00 5.83 ATOM 1998 N SER 11 -0.772 49.375 13.623 1.00 6.10 ATOM 2000 CA SER 11 0.096 49.694 12.528 1.00 6.10 ATOM 2001 CB SER 11 1.299 48.720 12.491 1.00 6.10 ATOM 2002 OG SER 11 0.871 47.388 12.230 1.00 6.10 ATOM 2004 C SER 11 -0.606 49.656 11.206 1.00 6.10 ATOM 2005 O SER 11 -1.733 49.179 11.101 1.00 6.10 ATOM 2006 N TYR 12 0.087 50.183 10.168 1.00 6.24 ATOM 2008 CA TYR 12 -0.337 50.230 8.786 1.00 6.24 ATOM 2009 CB TYR 12 0.794 50.994 8.054 1.00 6.24 ATOM 2010 CG TYR 12 0.817 51.069 6.567 1.00 6.24 ATOM 2011 CD1 TYR 12 0.007 51.906 5.791 1.00 6.24 ATOM 2012 CE1 TYR 12 0.148 51.920 4.396 1.00 6.24 ATOM 2013 CZ TYR 12 1.114 51.108 3.786 1.00 6.24 ATOM 2014 OH TYR 12 1.297 51.094 2.391 1.00 6.24 ATOM 2016 CE2 TYR 12 1.932 50.290 4.557 1.00 6.24 ATOM 2017 CD2 TYR 12 1.783 50.283 5.937 1.00 6.24 ATOM 2018 C TYR 12 -0.451 48.791 8.354 1.00 6.24 ATOM 2019 O TYR 12 -1.523 48.348 7.938 1.00 6.24 ATOM 2020 N VAL 13 0.665 48.044 8.500 1.00 6.34 ATOM 2022 CA VAL 13 0.800 46.633 8.248 1.00 6.34 ATOM 2023 CB VAL 13 1.070 46.093 6.836 1.00 6.34 ATOM 2024 CG1 VAL 13 -0.176 46.288 5.962 1.00 6.34 ATOM 2025 CG2 VAL 13 2.340 46.689 6.196 1.00 6.34 ATOM 2026 C VAL 13 1.892 46.208 9.173 1.00 6.34 ATOM 2027 O VAL 13 2.962 46.827 9.220 1.00 6.34 ATOM 2028 N ALA 14 1.601 45.180 9.993 1.00 6.71 ATOM 2030 CA ALA 14 2.607 44.690 10.895 1.00 6.71 ATOM 2031 CB ALA 14 2.080 44.090 12.209 1.00 6.71 ATOM 2032 C ALA 14 3.332 43.622 10.147 1.00 6.71 ATOM 2033 O ALA 14 2.780 42.551 9.876 1.00 6.71 ATOM 2034 N GLU 15 4.595 43.920 9.770 1.00 7.63 ATOM 2036 CA GLU 15 5.374 42.958 9.057 1.00 7.63 ATOM 2037 CB GLU 15 6.220 43.548 7.901 1.00 7.63 ATOM 2038 CG GLU 15 6.892 42.489 7.010 1.00 7.63 ATOM 2039 CD GLU 15 7.700 43.166 5.907 1.00 7.63 ATOM 2040 OE1 GLU 15 7.110 43.936 5.103 1.00 7.63 ATOM 2041 OE2 GLU 15 8.931 42.907 5.843 1.00 7.63 ATOM 2042 C GLU 15 6.247 42.279 10.058 1.00 7.63 ATOM 2043 O GLU 15 7.101 42.901 10.694 1.00 7.63 ATOM 2044 N THR 16 5.993 40.971 10.235 1.00 8.48 ATOM 2046 CA THR 16 6.753 40.166 11.138 1.00 8.48 ATOM 2047 CB THR 16 5.934 39.683 12.318 1.00 8.48 ATOM 2048 CG2 THR 16 6.853 38.919 13.288 1.00 8.48 ATOM 2049 OG1 THR 16 5.371 40.792 13.005 1.00 8.48 ATOM 2051 C THR 16 7.215 39.012 10.293 1.00 8.48 ATOM 2052 O THR 16 6.467 38.066 10.038 1.00 8.48 ATOM 2053 N GLY 17 8.483 39.082 9.841 1.00 8.69 ATOM 2055 CA GLY 17 9.040 38.042 9.023 1.00 8.69 ATOM 2056 C GLY 17 10.444 37.819 9.461 1.00 8.69 ATOM 2057 O GLY 17 11.147 38.770 9.810 1.00 8.69 ATOM 2058 N GLN 18 10.872 36.529 9.417 1.00 8.33 ATOM 2060 CA GLN 18 12.176 36.015 9.789 1.00 8.33 ATOM 2061 CB GLN 18 13.246 36.167 8.658 1.00 8.33 ATOM 2062 CG GLN 18 13.642 37.582 8.201 1.00 8.33 ATOM 2063 CD GLN 18 14.498 37.480 6.947 1.00 8.33 ATOM 2064 OE1 GLN 18 15.693 37.191 6.988 1.00 8.33 ATOM 2065 NE2 GLN 18 13.858 37.738 5.776 1.00 8.33 ATOM 2068 C GLN 18 12.611 36.472 11.165 1.00 8.33 ATOM 2069 O GLN 18 13.789 36.728 11.432 1.00 8.33 ATOM 2070 N ASN 19 11.617 36.568 12.082 1.00 7.40 ATOM 2072 CA ASN 19 11.836 36.998 13.433 1.00 7.40 ATOM 2073 CB ASN 19 10.910 38.152 13.878 1.00 7.40 ATOM 2074 CG ASN 19 11.229 39.438 13.113 1.00 7.40 ATOM 2075 OD1 ASN 19 12.377 39.772 12.819 1.00 7.40 ATOM 2076 ND2 ASN 19 10.159 40.194 12.762 1.00 7.40 ATOM 2079 C ASN 19 11.657 35.867 14.376 1.00 7.40 ATOM 2080 O ASN 19 10.627 35.194 14.356 1.00 7.40 ATOM 2081 N TRP 20 12.681 35.625 15.222 1.00 6.60 ATOM 2083 CA TRP 20 12.595 34.561 16.169 1.00 6.60 ATOM 2084 CB TRP 20 13.802 33.594 16.145 1.00 6.60 ATOM 2085 CG TRP 20 13.621 32.363 17.011 1.00 6.60 ATOM 2086 CD1 TRP 20 14.070 32.123 18.281 1.00 6.60 ATOM 2087 NE1 TRP 20 13.622 30.899 18.723 1.00 6.60 ATOM 2089 CE2 TRP 20 12.876 30.317 17.721 1.00 6.60 ATOM 2090 CZ2 TRP 20 12.210 29.099 17.660 1.00 6.60 ATOM 2091 CH2 TRP 20 11.524 28.777 16.481 1.00 6.60 ATOM 2092 CZ3 TRP 20 11.508 29.660 15.392 1.00 6.60 ATOM 2093 CE3 TRP 20 12.176 30.890 15.456 1.00 6.60 ATOM 2094 CD2 TRP 20 12.857 31.206 16.626 1.00 6.60 ATOM 2095 C TRP 20 12.426 35.146 17.533 1.00 6.60 ATOM 2096 O TRP 20 13.292 35.860 18.040 1.00 6.60 ATOM 2097 N ALA 21 11.257 34.861 18.135 1.00 6.39 ATOM 2099 CA ALA 21 10.943 35.299 19.461 1.00 6.39 ATOM 2100 CB ALA 21 9.444 35.505 19.708 1.00 6.39 ATOM 2101 C ALA 21 11.417 34.207 20.364 1.00 6.39 ATOM 2102 O ALA 21 11.227 33.022 20.069 1.00 6.39 ATOM 2103 N SER 22 12.044 34.596 21.497 1.00 6.42 ATOM 2105 CA SER 22 12.550 33.659 22.471 1.00 6.42 ATOM 2106 CB SER 22 13.300 34.359 23.613 1.00 6.42 ATOM 2107 OG SER 22 14.472 34.965 23.095 1.00 6.42 ATOM 2109 C SER 22 11.401 32.889 23.060 1.00 6.42 ATOM 2110 O SER 22 11.514 31.684 23.296 1.00 6.42 ATOM 2111 N LEU 23 10.265 33.589 23.287 1.00 6.56 ATOM 2113 CA LEU 23 9.069 33.005 23.813 1.00 6.56 ATOM 2114 CB LEU 23 8.065 34.084 24.285 1.00 6.56 ATOM 2115 CG LEU 23 6.768 33.580 24.958 1.00 6.56 ATOM 2116 CD1 LEU 23 7.046 32.891 26.305 1.00 6.56 ATOM 2117 CD2 LEU 23 5.719 34.700 25.037 1.00 6.56 ATOM 2118 C LEU 23 8.408 32.177 22.742 1.00 6.56 ATOM 2119 O LEU 23 8.124 32.652 21.639 1.00 6.56 ATOM 2120 N ALA 24 8.186 30.887 23.073 1.00 6.58 ATOM 2122 CA ALA 24 7.518 29.941 22.218 1.00 6.58 ATOM 2123 CB ALA 24 7.761 28.471 22.600 1.00 6.58 ATOM 2124 C ALA 24 6.056 30.240 22.374 1.00 6.58 ATOM 2125 O ALA 24 5.598 30.601 23.463 1.00 6.58 ATOM 2126 N ALA 25 5.299 30.064 21.272 1.00 6.45 ATOM 2128 CA ALA 25 3.887 30.340 21.179 1.00 6.45 ATOM 2129 CB ALA 25 2.992 29.454 22.083 1.00 6.45 ATOM 2130 C ALA 25 3.610 31.812 21.371 1.00 6.45 ATOM 2131 O ALA 25 2.584 32.214 21.926 1.00 6.45 ATOM 2132 N ASN 26 4.570 32.656 20.909 1.00 6.29 ATOM 2134 CA ASN 26 4.443 34.085 20.954 1.00 6.29 ATOM 2135 CB ASN 26 5.766 34.863 20.782 1.00 6.29 ATOM 2136 CG ASN 26 5.567 36.373 20.985 1.00 6.29 ATOM 2137 OD1 ASN 26 4.659 36.858 21.660 1.00 6.29 ATOM 2138 ND2 ASN 26 6.445 37.165 20.318 1.00 6.29 ATOM 2141 C ASN 26 3.589 34.406 19.766 1.00 6.29 ATOM 2142 O ASN 26 3.801 33.888 18.665 1.00 6.29 ATOM 2143 N GLU 27 2.566 35.248 19.995 1.00 6.13 ATOM 2145 CA GLU 27 1.669 35.669 18.959 1.00 6.13 ATOM 2146 CB GLU 27 0.432 36.436 19.468 1.00 6.13 ATOM 2147 CG GLU 27 -0.545 35.635 20.343 1.00 6.13 ATOM 2148 CD GLU 27 -0.190 35.636 21.835 1.00 6.13 ATOM 2149 OE1 GLU 27 -1.006 35.045 22.588 1.00 6.13 ATOM 2150 OE2 GLU 27 0.852 36.204 22.262 1.00 6.13 ATOM 2151 C GLU 27 2.395 36.606 18.045 1.00 6.13 ATOM 2152 O GLU 27 3.144 37.471 18.504 1.00 6.13 ATOM 2153 N LEU 28 2.215 36.415 16.714 1.00 6.16 ATOM 2155 CA LEU 28 2.816 37.283 15.733 1.00 6.16 ATOM 2156 CB LEU 28 2.679 36.754 14.292 1.00 6.16 ATOM 2157 CG LEU 28 3.569 35.528 14.016 1.00 6.16 ATOM 2158 CD1 LEU 28 3.230 34.860 12.681 1.00 6.16 ATOM 2159 CD2 LEU 28 5.058 35.897 14.093 1.00 6.16 ATOM 2160 C LEU 28 2.070 38.579 15.857 1.00 6.16 ATOM 2161 O LEU 28 2.689 39.639 15.953 1.00 6.16 ATOM 2162 N ARG 29 0.717 38.489 15.886 1.00 6.63 ATOM 2164 CA ARG 29 -0.139 39.626 16.063 1.00 6.63 ATOM 2165 CB ARG 29 -0.239 40.553 14.832 1.00 6.63 ATOM 2166 CG ARG 29 -0.896 41.906 15.116 1.00 6.63 ATOM 2167 CD ARG 29 -0.943 42.819 13.901 1.00 6.63 ATOM 2168 NE ARG 29 -1.470 44.129 14.366 1.00 6.63 ATOM 2170 CZ ARG 29 -1.445 45.236 13.564 1.00 6.63 ATOM 2171 NH1 ARG 29 -1.102 45.183 12.238 1.00 6.63 ATOM 2174 NH2 ARG 29 -1.762 46.440 14.121 1.00 6.63 ATOM 2177 C ARG 29 -1.516 39.090 16.356 1.00 6.63 ATOM 2178 O ARG 29 -1.909 38.033 15.856 1.00 6.63 ATOM 2179 N VAL 30 -2.246 39.817 17.230 1.00 7.16 ATOM 2181 CA VAL 30 -3.606 39.577 17.673 1.00 7.16 ATOM 2182 CB VAL 30 -3.795 38.642 18.881 1.00 7.16 ATOM 2183 CG1 VAL 30 -3.369 37.203 18.543 1.00 7.16 ATOM 2184 CG2 VAL 30 -3.021 39.186 20.105 1.00 7.16 ATOM 2185 C VAL 30 -4.228 40.925 17.978 1.00 7.16 ATOM 2186 O VAL 30 -3.572 41.960 17.837 1.00 7.16 ATOM 2187 N THR 31 -5.537 40.933 18.345 1.00 7.35 ATOM 2189 CA THR 31 -6.330 42.086 18.721 1.00 7.35 ATOM 2190 CB THR 31 -5.722 42.885 19.877 1.00 7.35 ATOM 2191 CG2 THR 31 -6.652 44.037 20.316 1.00 7.35 ATOM 2192 OG1 THR 31 -5.531 42.020 20.989 1.00 7.35 ATOM 2194 C THR 31 -6.688 42.969 17.551 1.00 7.35 ATOM 2195 O THR 31 -7.872 43.070 17.220 1.00 7.35 ATOM 2196 N GLU 32 -5.686 43.589 16.871 1.00 7.42 ATOM 2198 CA GLU 32 -5.933 44.476 15.761 1.00 7.42 ATOM 2199 CB GLU 32 -4.807 45.520 15.546 1.00 7.42 ATOM 2200 CG GLU 32 -4.537 46.517 16.681 1.00 7.42 ATOM 2201 CD GLU 32 -3.549 45.972 17.723 1.00 7.42 ATOM 2202 OE1 GLU 32 -3.024 44.834 17.591 1.00 7.42 ATOM 2203 OE2 GLU 32 -3.300 46.737 18.690 1.00 7.42 ATOM 2204 C GLU 32 -6.076 43.670 14.492 1.00 7.42 ATOM 2205 O GLU 32 -5.273 43.759 13.562 1.00 7.42 ATOM 2206 N ARG 33 -7.157 42.863 14.433 1.00 7.37 ATOM 2208 CA ARG 33 -7.468 42.020 13.309 1.00 7.37 ATOM 2209 CB ARG 33 -8.537 40.957 13.617 1.00 7.37 ATOM 2210 CG ARG 33 -7.941 39.845 14.489 1.00 7.37 ATOM 2211 CD ARG 33 -8.800 38.588 14.651 1.00 7.37 ATOM 2212 NE ARG 33 -10.009 38.957 15.450 1.00 7.37 ATOM 2214 CZ ARG 33 -10.013 38.942 16.821 1.00 7.37 ATOM 2215 NH1 ARG 33 -11.158 39.286 17.478 1.00 7.37 ATOM 2218 NH2 ARG 33 -8.908 38.601 17.554 1.00 7.37 ATOM 2221 C ARG 33 -7.726 42.715 11.994 1.00 7.37 ATOM 2222 O ARG 33 -7.247 42.150 11.008 1.00 7.37 ATOM 2223 N PRO 34 -8.434 43.852 11.844 1.00 7.42 ATOM 2224 CA PRO 34 -8.623 44.493 10.556 1.00 7.42 ATOM 2225 CB PRO 34 -9.674 45.585 10.764 1.00 7.42 ATOM 2226 CG PRO 34 -9.633 45.877 12.273 1.00 7.42 ATOM 2227 CD PRO 34 -9.181 44.547 12.894 1.00 7.42 ATOM 2228 C PRO 34 -7.342 45.042 9.982 1.00 7.42 ATOM 2229 O PRO 34 -7.265 45.171 8.759 1.00 7.42 ATOM 2230 N PHE 35 -6.347 45.393 10.836 1.00 7.75 ATOM 2232 CA PHE 35 -5.061 45.856 10.379 1.00 7.75 ATOM 2233 CB PHE 35 -4.225 46.538 11.472 1.00 7.75 ATOM 2234 CG PHE 35 -4.876 47.834 11.820 1.00 7.75 ATOM 2235 CD1 PHE 35 -5.684 47.922 12.957 1.00 7.75 ATOM 2236 CE1 PHE 35 -6.303 49.123 13.301 1.00 7.75 ATOM 2237 CZ PHE 35 -6.117 50.248 12.495 1.00 7.75 ATOM 2238 CE2 PHE 35 -5.324 50.176 11.352 1.00 7.75 ATOM 2239 CD2 PHE 35 -4.711 48.968 11.017 1.00 7.75 ATOM 2240 C PHE 35 -4.334 44.641 9.904 1.00 7.75 ATOM 2241 O PHE 35 -4.270 43.634 10.616 1.00 7.75 ATOM 2242 N TRP 36 -3.776 44.717 8.678 1.00 8.03 ATOM 2244 CA TRP 36 -3.111 43.573 8.141 1.00 8.03 ATOM 2245 CB TRP 36 -3.281 43.348 6.635 1.00 8.03 ATOM 2246 CG TRP 36 -4.723 42.986 6.342 1.00 8.03 ATOM 2247 CD1 TRP 36 -5.671 43.747 5.726 1.00 8.03 ATOM 2248 NE1 TRP 36 -6.885 43.107 5.732 1.00 8.03 ATOM 2250 CE2 TRP 36 -6.738 41.897 6.368 1.00 8.03 ATOM 2251 CZ2 TRP 36 -7.654 40.891 6.646 1.00 8.03 ATOM 2252 CH2 TRP 36 -7.200 39.753 7.327 1.00 8.03 ATOM 2253 CZ3 TRP 36 -5.863 39.641 7.735 1.00 8.03 ATOM 2254 CE3 TRP 36 -4.944 40.663 7.467 1.00 8.03 ATOM 2255 CD2 TRP 36 -5.392 41.784 6.772 1.00 8.03 ATOM 2256 C TRP 36 -1.760 43.214 8.652 1.00 8.03 ATOM 2257 O TRP 36 -0.984 44.024 9.166 1.00 8.03 ATOM 2258 N ILE 37 -1.530 41.895 8.558 1.00 8.10 ATOM 2260 CA ILE 37 -0.355 41.224 9.011 1.00 8.10 ATOM 2261 CB ILE 37 -0.743 40.007 9.868 1.00 8.10 ATOM 2262 CG2 ILE 37 0.514 39.272 10.395 1.00 8.10 ATOM 2263 CG1 ILE 37 -1.621 40.420 11.064 1.00 8.10 ATOM 2264 CD1 ILE 37 -2.254 39.238 11.805 1.00 8.10 ATOM 2265 C ILE 37 0.364 40.700 7.800 1.00 8.10 ATOM 2266 O ILE 37 -0.233 40.401 6.763 1.00 8.10 ATOM 2267 N SER 38 1.703 40.667 7.910 1.00 8.03 ATOM 2269 CA SER 38 2.551 40.114 6.903 1.00 8.03 ATOM 2270 CB SER 38 3.394 41.180 6.196 1.00 8.03 ATOM 2271 OG SER 38 2.519 42.008 5.444 1.00 8.03 ATOM 2273 C SER 38 3.372 39.132 7.707 1.00 8.03 ATOM 2274 O SER 38 4.112 39.521 8.609 1.00 8.03 ATOM 2275 N SER 39 3.180 37.817 7.443 1.00 7.93 ATOM 2277 CA SER 39 3.832 36.723 8.118 1.00 7.93 ATOM 2278 CB SER 39 3.199 36.450 9.498 1.00 7.93 ATOM 2279 OG SER 39 1.850 36.006 9.382 1.00 7.93 ATOM 2281 C SER 39 3.781 35.442 7.314 1.00 7.93 ATOM 2282 O SER 39 2.951 35.298 6.414 1.00 7.93 ATOM 2283 N PHE 40 4.704 34.493 7.622 1.00 7.79 ATOM 2285 CA PHE 40 4.771 33.209 6.961 1.00 7.79 ATOM 2286 CB PHE 40 5.681 33.237 5.704 1.00 7.79 ATOM 2287 CG PHE 40 5.708 31.965 4.916 1.00 7.79 ATOM 2288 CD1 PHE 40 4.681 31.697 4.008 1.00 7.79 ATOM 2289 CE1 PHE 40 4.684 30.526 3.247 1.00 7.79 ATOM 2290 CZ PHE 40 5.728 29.613 3.387 1.00 7.79 ATOM 2291 CE2 PHE 40 6.767 29.871 4.285 1.00 7.79 ATOM 2292 CD2 PHE 40 6.758 31.045 5.042 1.00 7.79 ATOM 2293 C PHE 40 5.384 32.248 7.948 1.00 7.79 ATOM 2294 O PHE 40 6.339 32.593 8.643 1.00 7.79 ATOM 2295 N ILE 41 4.834 31.018 8.031 1.00 7.59 ATOM 2297 CA ILE 41 5.350 29.995 8.907 1.00 7.59 ATOM 2298 CB ILE 41 4.751 30.013 10.322 1.00 7.59 ATOM 2299 CG2 ILE 41 3.239 29.706 10.294 1.00 7.59 ATOM 2300 CG1 ILE 41 5.548 29.104 11.285 1.00 7.59 ATOM 2301 CD1 ILE 41 5.264 29.304 12.769 1.00 7.59 ATOM 2302 C ILE 41 5.103 28.679 8.229 1.00 7.59 ATOM 2303 O ILE 41 4.236 28.568 7.361 1.00 7.59 ATOM 2304 N GLY 42 5.890 27.650 8.586 1.00 7.31 ATOM 2306 CA GLY 42 5.650 26.384 7.994 1.00 7.31 ATOM 2307 C GLY 42 6.461 25.321 8.601 1.00 7.31 ATOM 2308 O GLY 42 7.571 25.535 9.095 1.00 7.31 ATOM 2309 N ARG 43 5.859 24.120 8.579 1.00 7.07 ATOM 2311 CA ARG 43 6.508 22.954 9.041 1.00 7.07 ATOM 2312 CB ARG 43 5.697 21.999 9.944 1.00 7.07 ATOM 2313 CG ARG 43 5.337 22.616 11.303 1.00 7.07 ATOM 2314 CD ARG 43 6.580 22.902 12.163 1.00 7.07 ATOM 2315 NE ARG 43 6.151 23.290 13.539 1.00 7.07 ATOM 2317 CZ ARG 43 7.015 23.866 14.435 1.00 7.07 ATOM 2318 NH1 ARG 43 6.611 23.995 15.730 1.00 7.07 ATOM 2321 NH2 ARG 43 8.251 24.332 14.082 1.00 7.07 ATOM 2324 C ARG 43 6.977 22.327 7.784 1.00 7.07 ATOM 2325 O ARG 43 6.275 21.569 7.108 1.00 7.07 ATOM 2326 N SER 44 8.208 22.759 7.455 1.00 6.88 ATOM 2328 CA SER 44 9.022 22.350 6.348 1.00 6.88 ATOM 2329 CB SER 44 10.173 23.330 6.079 1.00 6.88 ATOM 2330 OG SER 44 9.643 24.594 5.705 1.00 6.88 ATOM 2332 C SER 44 9.591 21.010 6.725 1.00 6.88 ATOM 2333 O SER 44 10.010 20.247 5.854 1.00 6.88 ATOM 2334 N LYS 45 9.626 20.717 8.060 1.00 6.70 ATOM 2336 CA LYS 45 10.061 19.470 8.640 1.00 6.70 ATOM 2337 CB LYS 45 9.937 19.434 10.173 1.00 6.70 ATOM 2338 CG LYS 45 10.918 20.323 10.934 1.00 6.70 ATOM 2339 CD LYS 45 10.736 20.213 12.448 1.00 6.70 ATOM 2340 CE LYS 45 11.684 21.089 13.264 1.00 6.70 ATOM 2341 NZ LYS 45 11.426 20.892 14.705 1.00 6.70 ATOM 2345 C LYS 45 9.076 18.456 8.121 1.00 6.70 ATOM 2346 O LYS 45 9.466 17.332 7.800 1.00 6.70 TER END