####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS460_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 9 - 29 2.00 5.75 LCS_AVERAGE: 36.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.91 LCS_AVERAGE: 16.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 3 3 3 4 14 22 26 29 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 7 44 4 4 7 11 13 22 26 29 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 7 44 3 4 5 11 17 23 26 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 3 7 44 4 6 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 3 7 44 2 3 4 7 17 23 29 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 3 7 44 3 3 4 8 9 16 25 34 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 3 12 44 3 3 6 10 20 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 21 44 8 10 13 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 21 44 8 10 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 21 44 8 10 10 17 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 21 44 8 10 10 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 21 44 8 10 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 21 44 8 10 10 17 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 21 44 8 10 10 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 21 44 8 10 10 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 21 44 5 10 10 17 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 21 44 3 3 4 9 17 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 21 44 3 4 4 8 15 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 21 44 10 12 13 15 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 21 44 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 18 44 3 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 18 44 7 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 18 44 3 3 3 5 6 14 23 28 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 18 44 3 3 5 14 19 25 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 18 44 3 3 3 5 8 14 18 22 27 33 35 40 41 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 18 44 3 3 12 14 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 5 18 44 3 4 9 17 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 5 18 44 4 4 9 17 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 4 7 16 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 7 10 44 4 5 9 15 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 7 10 44 4 5 7 11 15 23 30 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 7 10 44 4 7 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 7 10 44 4 5 7 11 11 11 20 29 33 37 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 7 10 44 4 5 7 11 11 11 13 15 16 26 31 36 41 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 7 10 44 3 5 7 11 11 11 12 14 15 19 21 27 29 35 37 40 43 43 43 43 LCS_GDT K 45 K 45 7 10 44 0 3 7 11 11 11 12 14 14 16 18 22 24 26 31 35 37 38 39 42 LCS_AVERAGE LCS_A: 51.31 ( 16.94 36.98 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 18 23 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 27.27 31.82 40.91 52.27 59.09 72.73 79.55 81.82 88.64 90.91 90.91 93.18 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.33 0.54 1.22 1.45 1.85 2.00 2.38 2.63 2.73 3.00 3.15 3.15 3.29 3.55 3.55 3.55 3.94 3.94 3.94 3.94 GDT RMS_ALL_AT 5.85 5.91 4.76 4.83 4.96 5.04 5.16 4.95 4.96 4.82 4.73 4.73 4.72 4.63 4.63 4.63 4.55 4.55 4.55 4.55 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.977 0 0.071 0.109 6.522 0.000 0.000 - LGA V 3 V 3 5.295 0 0.213 1.045 6.254 1.818 1.039 6.254 LGA Q 4 Q 4 4.402 0 0.072 0.658 6.384 10.909 4.848 5.107 LGA G 5 G 5 1.833 0 0.173 0.173 4.758 24.545 24.545 - LGA P 6 P 6 4.481 0 0.336 0.341 5.611 4.545 2.857 5.611 LGA W 7 W 7 5.384 0 0.399 1.036 11.386 2.727 0.779 11.386 LGA V 8 V 8 2.903 0 0.124 0.871 6.128 35.000 24.156 3.454 LGA G 9 G 9 2.439 0 0.509 0.509 2.439 55.000 55.000 - LGA S 10 S 10 0.285 0 0.134 0.163 1.349 78.182 76.667 1.349 LGA S 11 S 11 3.112 0 0.057 0.597 4.402 27.727 22.424 3.340 LGA Y 12 Y 12 2.138 0 0.122 0.848 10.556 51.818 19.242 10.556 LGA V 13 V 13 0.946 0 0.063 1.131 4.768 74.545 61.818 4.768 LGA A 14 A 14 2.903 0 0.013 0.018 3.636 26.818 25.091 - LGA E 15 E 15 3.087 0 0.094 1.170 4.809 22.727 18.384 4.332 LGA T 16 T 16 1.334 0 0.193 0.275 1.709 61.818 68.052 0.571 LGA G 17 G 17 2.279 0 0.668 0.668 3.206 33.182 33.182 - LGA Q 18 Q 18 3.640 0 0.577 0.494 8.148 11.818 5.253 8.037 LGA N 19 N 19 3.469 0 0.250 1.206 9.727 29.545 14.773 7.081 LGA W 20 W 20 3.190 0 0.376 0.681 9.958 33.636 9.740 9.958 LGA A 21 A 21 1.699 0 0.077 0.070 2.285 55.000 54.182 - LGA S 22 S 22 1.469 0 0.039 0.615 2.057 61.818 56.061 1.792 LGA L 23 L 23 1.733 0 0.096 1.403 6.243 58.182 34.318 4.768 LGA A 24 A 24 1.760 0 0.026 0.027 2.059 54.545 51.273 - LGA A 25 A 25 0.856 0 0.050 0.051 1.159 77.727 82.182 - LGA N 26 N 26 0.607 0 0.080 0.347 1.373 82.273 80.227 1.162 LGA E 27 E 27 1.347 0 0.094 0.785 3.183 55.000 39.798 3.179 LGA L 28 L 28 1.947 0 0.190 1.408 5.330 41.818 26.364 5.330 LGA R 29 R 29 1.893 0 0.221 1.506 10.912 54.545 22.479 10.912 LGA V 30 V 30 1.702 0 0.265 1.155 2.989 58.182 49.870 2.989 LGA T 31 T 31 1.816 0 0.713 0.919 6.324 41.364 27.792 3.280 LGA E 32 E 32 5.264 0 0.328 1.058 9.596 6.818 3.030 9.596 LGA R 33 R 33 3.971 0 0.046 1.119 7.757 4.091 5.620 5.791 LGA P 34 P 34 6.720 0 0.661 0.627 7.824 0.000 0.000 7.824 LGA F 35 F 35 3.170 0 0.557 0.889 10.210 15.455 6.612 10.210 LGA W 36 W 36 3.624 0 0.591 0.536 8.447 23.636 6.753 8.295 LGA I 37 I 37 3.659 0 0.154 0.849 6.603 27.727 14.091 6.603 LGA S 38 S 38 2.343 0 0.043 0.635 5.942 38.636 26.667 5.942 LGA S 39 S 39 2.902 0 0.158 0.679 4.912 28.182 22.121 4.772 LGA F 40 F 40 3.712 0 0.082 0.413 9.784 17.727 6.942 9.280 LGA I 41 I 41 1.428 0 0.119 0.628 5.409 34.091 24.091 5.409 LGA G 42 G 42 7.498 0 0.089 0.089 11.174 0.000 0.000 - LGA R 43 R 43 10.491 0 0.105 0.791 16.914 0.000 0.000 16.914 LGA S 44 S 44 13.726 0 0.625 0.608 15.026 0.000 0.000 14.259 LGA K 45 K 45 17.809 0 0.425 0.932 20.930 0.000 0.000 20.930 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.507 4.507 5.993 32.345 25.189 10.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 35 2.63 60.795 58.369 1.281 LGA_LOCAL RMSD: 2.632 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.954 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.507 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.716038 * X + -0.524124 * Y + -0.461068 * Z + 33.074547 Y_new = 0.348742 * X + -0.303577 * Y + 0.886691 * Z + -27.821930 Z_new = -0.604705 * X + -0.795698 * Y + -0.034589 * Z + 95.465569 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.453229 0.649396 -1.614239 [DEG: 25.9681 37.2076 -92.4891 ] ZXZ: -2.662084 1.605392 -2.491742 [DEG: -152.5262 91.9822 -142.7663 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS460_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 35 2.63 58.369 4.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS460_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 9 N ALA 2 9.200 41.248 12.707 1.00 11.24 ATOM 8 CA ALA 2 9.274 41.715 11.321 1.00 11.24 ATOM 11 CB ALA 2 9.369 43.241 11.291 1.00 11.24 ATOM 12 C ALA 2 10.477 41.139 10.601 1.00 11.24 ATOM 13 O ALA 2 11.562 41.040 11.157 1.00 11.24 ATOM 15 N VAL 3 10.250 40.748 9.406 1.00 9.84 ATOM 14 CA VAL 3 11.253 40.287 8.499 1.00 9.84 ATOM 17 CB VAL 3 11.507 38.767 8.518 1.00 9.84 ATOM 18 C VAL 3 10.890 40.797 7.178 1.00 9.84 ATOM 19 O VAL 3 9.912 41.459 7.072 1.00 9.84 ATOM 20 CG1 VAL 3 12.090 38.318 9.894 1.00 9.84 ATOM 21 CG2 VAL 3 10.246 37.990 8.197 1.00 9.84 ATOM 23 N GLN 4 11.655 40.568 6.207 1.00 9.25 ATOM 22 CA GLN 4 11.293 40.998 4.850 1.00 9.25 ATOM 25 CB GLN 4 12.505 41.498 4.059 1.00 9.25 ATOM 26 C GLN 4 10.434 39.946 4.100 1.00 9.25 ATOM 27 O GLN 4 10.389 38.777 4.483 1.00 9.25 ATOM 28 CG GLN 4 13.554 42.176 4.958 1.00 9.25 ATOM 29 CD GLN 4 14.770 41.379 5.340 1.00 9.25 ATOM 30 NE2 GLN 4 15.943 42.085 5.305 1.00 9.25 ATOM 33 OE1 GLN 4 14.684 40.179 5.745 1.00 9.25 ATOM 35 N GLY 5 9.721 40.421 3.102 1.00 9.21 ATOM 34 CA GLY 5 8.746 39.619 2.347 1.00 9.21 ATOM 37 C GLY 5 7.348 40.075 2.699 1.00 9.21 ATOM 38 O GLY 5 6.989 40.073 3.844 1.00 9.21 ATOM 40 N PRO 6 6.522 40.393 1.697 1.00 9.47 ATOM 39 CA PRO 6 5.110 40.879 1.916 1.00 9.47 ATOM 41 CB PRO 6 4.804 41.543 0.610 1.00 9.47 ATOM 42 C PRO 6 4.121 39.801 2.207 1.00 9.47 ATOM 43 O PRO 6 3.075 39.701 1.558 1.00 9.47 ATOM 44 CG PRO 6 5.513 40.666 -0.389 1.00 9.47 ATOM 45 CD PRO 6 6.838 40.283 0.298 1.00 9.47 ATOM 47 N TRP 7 4.393 39.047 3.195 1.00 9.86 ATOM 46 CA TRP 7 3.559 37.939 3.583 1.00 9.86 ATOM 49 CB TRP 7 3.502 36.876 2.451 1.00 9.86 ATOM 50 C TRP 7 3.973 37.367 4.842 1.00 9.86 ATOM 51 O TRP 7 5.121 37.333 5.112 1.00 9.86 ATOM 52 CG TRP 7 2.621 35.620 2.727 1.00 9.86 ATOM 53 CD1 TRP 7 3.035 34.327 2.684 1.00 9.86 ATOM 54 NE1 TRP 7 1.994 33.483 3.015 1.00 9.86 ATOM 56 CD2 TRP 7 1.230 35.591 3.138 1.00 9.86 ATOM 57 CE2 TRP 7 0.895 34.237 3.354 1.00 9.86 ATOM 58 CE3 TRP 7 0.323 36.572 3.514 1.00 9.86 ATOM 59 CZ3 TRP 7 -0.854 36.187 4.181 1.00 9.86 ATOM 60 CH2 TRP 7 -1.138 34.845 4.420 1.00 9.86 ATOM 61 CZ2 TRP 7 -0.316 33.851 3.969 1.00 9.86 ATOM 63 N VAL 8 3.019 36.896 5.625 1.00 9.50 ATOM 62 CA VAL 8 3.325 36.215 6.866 1.00 9.50 ATOM 65 CB VAL 8 2.075 35.495 7.420 1.00 9.50 ATOM 66 C VAL 8 4.434 35.188 6.549 1.00 9.50 ATOM 67 O VAL 8 5.454 35.154 7.227 1.00 9.50 ATOM 68 CG1 VAL 8 1.801 34.259 6.604 1.00 9.50 ATOM 69 CG2 VAL 8 2.242 35.110 8.876 1.00 9.50 ATOM 71 N GLY 9 4.196 34.359 5.549 1.00 9.75 ATOM 70 CA GLY 9 5.209 33.362 5.007 1.00 9.75 ATOM 73 C GLY 9 5.042 31.927 5.488 1.00 9.75 ATOM 74 O GLY 9 4.579 31.682 6.583 1.00 9.75 ATOM 76 N SER 10 5.522 30.992 4.704 1.00 9.50 ATOM 75 CA SER 10 5.312 29.631 5.008 1.00 9.50 ATOM 78 CB SER 10 5.831 28.779 3.883 1.00 9.50 ATOM 79 C SER 10 6.000 29.235 6.246 1.00 9.50 ATOM 80 O SER 10 5.409 28.645 7.074 1.00 9.50 ATOM 81 OG SER 10 7.235 28.911 3.796 1.00 9.50 ATOM 83 N SER 11 7.190 29.632 6.463 1.00 9.66 ATOM 82 CA SER 11 7.836 29.168 7.636 1.00 9.66 ATOM 85 CB SER 11 9.285 29.511 7.605 1.00 9.66 ATOM 86 C SER 11 7.224 29.798 8.841 1.00 9.66 ATOM 87 O SER 11 7.141 29.186 9.866 1.00 9.66 ATOM 88 OG SER 11 9.420 30.874 7.711 1.00 9.66 ATOM 90 N TYR 12 6.704 31.012 8.700 1.00 9.86 ATOM 89 CA TYR 12 6.092 31.668 9.801 1.00 9.86 ATOM 92 CB TYR 12 5.996 33.203 9.625 1.00 9.86 ATOM 93 C TYR 12 4.869 30.938 10.187 1.00 9.86 ATOM 94 O TYR 12 4.702 30.595 11.331 1.00 9.86 ATOM 95 CG TYR 12 5.611 33.998 10.886 1.00 9.86 ATOM 96 CD1 TYR 12 6.006 33.552 12.153 1.00 9.86 ATOM 97 CE1 TYR 12 5.657 34.256 13.302 1.00 9.86 ATOM 98 CZ TYR 12 4.945 35.450 13.186 1.00 9.86 ATOM 99 CD2 TYR 12 4.953 35.232 10.793 1.00 9.86 ATOM 100 CE2 TYR 12 4.649 35.973 11.937 1.00 9.86 ATOM 101 OH TYR 12 4.639 36.173 14.318 1.00 9.86 ATOM 103 N VAL 13 4.033 30.573 9.210 1.00 9.26 ATOM 102 CA VAL 13 2.843 29.845 9.522 1.00 9.26 ATOM 105 CB VAL 13 1.912 29.754 8.412 1.00 9.26 ATOM 106 C VAL 13 3.192 28.495 10.080 1.00 9.26 ATOM 107 O VAL 13 2.662 28.114 10.994 1.00 9.26 ATOM 108 CG1 VAL 13 1.392 31.133 8.033 1.00 9.26 ATOM 109 CG2 VAL 13 2.502 29.048 7.227 1.00 9.26 ATOM 111 N ALA 14 4.170 27.851 9.555 1.00 9.36 ATOM 110 CA ALA 14 4.607 26.548 10.090 1.00 9.36 ATOM 113 CB ALA 14 5.723 26.015 9.257 1.00 9.36 ATOM 114 C ALA 14 5.073 26.679 11.538 1.00 9.36 ATOM 115 O ALA 14 4.735 25.835 12.376 1.00 9.36 ATOM 117 N GLU 15 5.806 27.774 11.875 1.00 9.23 ATOM 116 CA GLU 15 6.222 27.983 13.206 1.00 9.23 ATOM 119 CB GLU 15 7.164 29.208 13.371 1.00 9.23 ATOM 120 C GLU 15 5.133 28.173 14.073 1.00 9.23 ATOM 121 O GLU 15 5.184 27.724 15.159 1.00 9.23 ATOM 122 CG GLU 15 8.575 29.003 12.973 1.00 9.23 ATOM 123 CD GLU 15 9.414 30.228 13.198 1.00 9.23 ATOM 124 OE1 GLU 15 10.384 30.179 14.065 1.00 9.23 ATOM 125 OE2 GLU 15 9.133 31.272 12.542 1.00 9.23 ATOM 127 N THR 16 4.109 28.897 13.628 1.00 8.68 ATOM 126 CA THR 16 3.032 29.219 14.470 1.00 8.68 ATOM 129 CB THR 16 2.466 30.599 14.111 1.00 8.68 ATOM 130 C THR 16 1.939 28.126 14.468 1.00 8.68 ATOM 131 O THR 16 1.542 27.635 15.557 1.00 8.68 ATOM 132 CG2 THR 16 3.506 31.700 14.353 1.00 8.68 ATOM 133 OG1 THR 16 2.120 30.618 12.752 1.00 8.68 ATOM 135 N GLY 17 1.462 27.710 13.256 1.00 7.84 ATOM 134 CA GLY 17 0.531 26.621 13.191 1.00 7.84 ATOM 137 C GLY 17 -0.326 26.527 11.936 1.00 7.84 ATOM 138 O GLY 17 -0.224 27.328 11.022 1.00 7.84 ATOM 140 N GLN 18 -1.265 25.545 11.933 1.00 7.40 ATOM 139 CA GLN 18 -2.141 25.342 10.761 1.00 7.40 ATOM 142 CB GLN 18 -2.504 23.882 10.564 1.00 7.40 ATOM 143 C GLN 18 -3.365 26.218 10.817 1.00 7.40 ATOM 144 O GLN 18 -4.320 26.006 10.093 1.00 7.40 ATOM 145 CG GLN 18 -1.345 22.961 10.786 1.00 7.40 ATOM 146 CD GLN 18 -0.276 23.174 9.729 1.00 7.40 ATOM 147 NE2 GLN 18 0.941 23.465 10.158 1.00 7.40 ATOM 150 OE1 GLN 18 -0.563 23.132 8.528 1.00 7.40 ATOM 152 N ASN 19 -3.309 27.229 11.639 1.00 6.97 ATOM 151 CA ASN 19 -4.368 28.216 11.725 1.00 6.97 ATOM 154 CB ASN 19 -4.854 28.326 13.178 1.00 6.97 ATOM 155 C ASN 19 -3.737 29.521 11.214 1.00 6.97 ATOM 156 O ASN 19 -4.253 30.661 11.390 1.00 6.97 ATOM 157 CG ASN 19 -6.294 28.763 13.266 1.00 6.97 ATOM 158 ND2 ASN 19 -6.694 29.336 14.383 1.00 6.97 ATOM 161 OD1 ASN 19 -7.097 28.511 12.323 1.00 6.97 ATOM 163 N TRP 20 -2.606 29.264 10.543 1.00 6.78 ATOM 162 CA TRP 20 -1.738 30.218 9.899 1.00 6.78 ATOM 165 CB TRP 20 -2.193 30.259 8.448 1.00 6.78 ATOM 166 C TRP 20 -1.765 31.668 10.434 1.00 6.78 ATOM 167 O TRP 20 -1.447 31.943 11.598 1.00 6.78 ATOM 168 CG TRP 20 -1.702 29.158 7.613 1.00 6.78 ATOM 169 CD1 TRP 20 -1.760 27.800 7.879 1.00 6.78 ATOM 170 NE1 TRP 20 -1.273 27.097 6.814 1.00 6.78 ATOM 172 CD2 TRP 20 -1.175 29.285 6.326 1.00 6.78 ATOM 173 CE2 TRP 20 -0.936 27.965 5.834 1.00 6.78 ATOM 174 CE3 TRP 20 -0.910 30.343 5.521 1.00 6.78 ATOM 175 CZ3 TRP 20 -0.374 30.109 4.285 1.00 6.78 ATOM 176 CH2 TRP 20 -0.143 28.808 3.835 1.00 6.78 ATOM 177 CZ2 TRP 20 -0.449 27.733 4.594 1.00 6.78 ATOM 179 N ALA 21 -2.184 32.581 9.562 1.00 6.61 ATOM 178 CA ALA 21 -2.148 33.999 9.836 1.00 6.61 ATOM 181 CB ALA 21 -2.532 34.823 8.578 1.00 6.61 ATOM 182 C ALA 21 -2.969 34.354 11.000 1.00 6.61 ATOM 183 O ALA 21 -2.520 35.080 11.837 1.00 6.61 ATOM 185 N SER 22 -4.131 33.767 11.145 1.00 7.29 ATOM 184 CA SER 22 -4.996 34.121 12.281 1.00 7.29 ATOM 187 CB SER 22 -6.250 33.316 12.168 1.00 7.29 ATOM 188 C SER 22 -4.315 33.742 13.582 1.00 7.29 ATOM 189 O SER 22 -4.255 34.533 14.520 1.00 7.29 ATOM 190 OG SER 22 -6.936 33.648 10.992 1.00 7.29 ATOM 192 N LEU 23 -3.712 32.594 13.597 1.00 7.47 ATOM 191 CA LEU 23 -3.049 32.116 14.774 1.00 7.47 ATOM 194 CB LEU 23 -2.608 30.693 14.612 1.00 7.47 ATOM 195 C LEU 23 -1.936 32.991 15.104 1.00 7.47 ATOM 196 O LEU 23 -1.784 33.351 16.213 1.00 7.47 ATOM 197 CG LEU 23 -1.887 30.077 15.742 1.00 7.47 ATOM 198 CD1 LEU 23 -2.772 30.076 16.954 1.00 7.47 ATOM 199 CD2 LEU 23 -1.523 28.641 15.367 1.00 7.47 ATOM 201 N ALA 24 -1.185 33.421 14.087 1.00 7.58 ATOM 200 CA ALA 24 -0.045 34.269 14.283 1.00 7.58 ATOM 203 CB ALA 24 0.669 34.523 12.936 1.00 7.58 ATOM 204 C ALA 24 -0.491 35.590 14.895 1.00 7.58 ATOM 205 O ALA 24 0.153 36.110 15.790 1.00 7.58 ATOM 207 N ALA 25 -1.673 36.128 14.462 1.00 7.43 ATOM 206 CA ALA 25 -2.157 37.380 15.009 1.00 7.43 ATOM 209 CB ALA 25 -3.424 37.803 14.315 1.00 7.43 ATOM 210 C ALA 25 -2.425 37.226 16.419 1.00 7.43 ATOM 211 O ALA 25 -1.968 38.029 17.231 1.00 7.43 ATOM 213 N ASN 26 -3.077 36.127 16.774 1.00 7.34 ATOM 212 CA ASN 26 -3.427 35.880 18.141 1.00 7.34 ATOM 215 CB ASN 26 -4.318 34.654 18.199 1.00 7.34 ATOM 216 C ASN 26 -2.256 35.696 18.954 1.00 7.34 ATOM 217 O ASN 26 -2.146 36.274 19.971 1.00 7.34 ATOM 218 CG ASN 26 -5.758 34.962 17.753 1.00 7.34 ATOM 219 ND2 ASN 26 -6.273 34.192 16.797 1.00 7.34 ATOM 222 OD1 ASN 26 -6.372 35.932 18.216 1.00 7.34 ATOM 224 N GLU 27 -1.331 34.989 18.481 1.00 7.54 ATOM 223 CA GLU 27 -0.121 34.749 19.216 1.00 7.54 ATOM 226 CB GLU 27 0.748 33.731 18.399 1.00 7.54 ATOM 227 C GLU 27 0.652 36.089 19.483 1.00 7.54 ATOM 228 O GLU 27 1.132 36.326 20.589 1.00 7.54 ATOM 229 CG GLU 27 2.109 33.416 18.962 1.00 7.54 ATOM 230 CD GLU 27 2.084 32.695 20.329 1.00 7.54 ATOM 231 OE1 GLU 27 0.978 32.448 20.858 1.00 7.54 ATOM 232 OE2 GLU 27 3.180 32.341 20.845 1.00 7.54 ATOM 234 N LEU 28 0.711 36.942 18.500 1.00 7.58 ATOM 233 CA LEU 28 1.373 38.197 18.621 1.00 7.58 ATOM 236 CB LEU 28 1.563 38.849 17.235 1.00 7.58 ATOM 237 C LEU 28 0.636 39.122 19.603 1.00 7.58 ATOM 238 O LEU 28 1.257 39.958 20.293 1.00 7.58 ATOM 239 CG LEU 28 2.350 40.155 17.196 1.00 7.58 ATOM 240 CD1 LEU 28 3.757 39.912 17.656 1.00 7.58 ATOM 241 CD2 LEU 28 2.330 40.741 15.787 1.00 7.58 ATOM 243 N ARG 29 -0.686 38.997 19.605 1.00 8.23 ATOM 242 CA ARG 29 -1.555 39.849 20.322 1.00 8.23 ATOM 245 CB ARG 29 -1.337 40.013 21.815 1.00 8.23 ATOM 246 C ARG 29 -1.662 41.053 19.662 1.00 8.23 ATOM 247 O ARG 29 -1.237 42.099 20.119 1.00 8.23 ATOM 248 CG ARG 29 -2.713 39.985 22.660 1.00 8.23 ATOM 249 CD ARG 29 -3.492 38.619 22.642 1.00 8.23 ATOM 250 NE ARG 29 -3.921 38.271 21.351 1.00 8.23 ATOM 252 CZ ARG 29 -5.166 38.322 20.858 1.00 8.23 ATOM 253 NH1 ARG 29 -6.222 38.681 21.583 1.00 8.23 ATOM 254 NH2 ARG 29 -5.294 37.969 19.672 1.00 8.23 ATOM 256 N VAL 30 -2.168 40.936 18.565 1.00 8.34 ATOM 255 CA VAL 30 -2.478 41.969 17.839 1.00 8.34 ATOM 258 CB VAL 30 -1.656 42.147 16.521 1.00 8.34 ATOM 259 C VAL 30 -3.818 41.764 17.557 1.00 8.34 ATOM 260 O VAL 30 -4.310 40.592 17.715 1.00 8.34 ATOM 261 CG1 VAL 30 -0.210 42.479 16.801 1.00 8.34 ATOM 262 CG2 VAL 30 -1.766 40.908 15.671 1.00 8.34 ATOM 264 N THR 31 -4.525 42.808 17.224 1.00 8.60 ATOM 263 CA THR 31 -5.892 42.654 16.849 1.00 8.60 ATOM 266 CB THR 31 -6.488 43.949 16.252 1.00 8.60 ATOM 267 C THR 31 -5.958 41.497 15.863 1.00 8.60 ATOM 268 O THR 31 -5.002 41.253 15.143 1.00 8.60 ATOM 269 CG2 THR 31 -8.020 43.828 16.101 1.00 8.60 ATOM 270 OG1 THR 31 -6.198 45.044 17.141 1.00 8.60 ATOM 272 N GLU 32 -7.035 40.752 15.853 1.00 8.91 ATOM 271 CA GLU 32 -7.087 39.548 15.022 1.00 8.91 ATOM 274 CB GLU 32 -8.100 38.508 15.559 1.00 8.91 ATOM 275 C GLU 32 -7.467 39.839 13.646 1.00 8.91 ATOM 276 O GLU 32 -8.538 39.490 13.218 1.00 8.91 ATOM 277 CG GLU 32 -7.841 38.003 16.927 1.00 8.91 ATOM 278 CD GLU 32 -8.433 38.779 18.073 1.00 8.91 ATOM 279 OE1 GLU 32 -8.277 38.294 19.257 1.00 8.91 ATOM 280 OE2 GLU 32 -9.105 39.835 17.830 1.00 8.91 ATOM 282 N ARG 33 -6.592 40.541 12.945 1.00 8.75 ATOM 281 CA ARG 33 -6.753 40.817 11.566 1.00 8.75 ATOM 284 CB ARG 33 -7.196 42.347 11.209 1.00 8.75 ATOM 285 C ARG 33 -5.415 40.498 10.932 1.00 8.75 ATOM 286 O ARG 33 -4.358 41.092 11.315 1.00 8.75 ATOM 287 CG ARG 33 -7.909 43.211 12.295 1.00 8.75 ATOM 288 CD ARG 33 -9.521 43.161 12.360 1.00 8.75 ATOM 289 NE ARG 33 -10.027 41.964 13.020 1.00 8.75 ATOM 291 CZ ARG 33 -11.259 41.758 13.492 1.00 8.75 ATOM 292 NH1 ARG 33 -12.232 42.673 13.340 1.00 8.75 ATOM 293 NH2 ARG 33 -11.491 40.627 14.174 1.00 8.75 ATOM 295 N PRO 34 -5.419 39.661 9.963 1.00 8.80 ATOM 294 CA PRO 34 -4.152 39.235 9.251 1.00 8.80 ATOM 296 CB PRO 34 -4.637 38.226 8.255 1.00 8.80 ATOM 297 C PRO 34 -3.355 40.363 8.601 1.00 8.80 ATOM 298 O PRO 34 -2.161 40.223 8.353 1.00 8.80 ATOM 299 CG PRO 34 -6.086 38.606 8.052 1.00 8.80 ATOM 300 CD PRO 34 -6.576 39.044 9.410 1.00 8.80 ATOM 302 N PHE 35 -3.951 41.450 8.423 1.00 8.38 ATOM 301 CA PHE 35 -3.302 42.573 7.852 1.00 8.38 ATOM 304 CB PHE 35 -4.188 43.754 7.728 1.00 8.38 ATOM 305 C PHE 35 -2.188 42.950 8.635 1.00 8.38 ATOM 306 O PHE 35 -1.092 43.127 8.103 1.00 8.38 ATOM 307 CG PHE 35 -3.436 44.850 7.148 1.00 8.38 ATOM 308 CD1 PHE 35 -3.026 44.793 5.879 1.00 8.38 ATOM 309 CE1 PHE 35 -2.352 45.852 5.308 1.00 8.38 ATOM 310 CZ PHE 35 -2.151 46.990 6.029 1.00 8.38 ATOM 311 CD2 PHE 35 -3.106 45.935 7.894 1.00 8.38 ATOM 312 CE2 PHE 35 -2.439 47.007 7.326 1.00 8.38 ATOM 314 N TRP 36 -2.350 43.028 9.918 1.00 8.36 ATOM 313 CA TRP 36 -1.281 43.507 10.666 1.00 8.36 ATOM 316 CB TRP 36 -1.606 43.668 12.060 1.00 8.36 ATOM 317 C TRP 36 -0.135 42.594 10.529 1.00 8.36 ATOM 318 O TRP 36 0.953 43.047 10.324 1.00 8.36 ATOM 319 CG TRP 36 -2.708 44.569 12.199 1.00 8.36 ATOM 320 CD1 TRP 36 -3.968 44.263 12.610 1.00 8.36 ATOM 321 NE1 TRP 36 -4.765 45.338 12.493 1.00 8.36 ATOM 323 CD2 TRP 36 -2.721 45.893 11.842 1.00 8.36 ATOM 324 CE2 TRP 36 -4.070 46.335 11.950 1.00 8.36 ATOM 325 CE3 TRP 36 -1.793 46.727 11.228 1.00 8.36 ATOM 326 CZ3 TRP 36 -2.220 47.877 10.684 1.00 8.36 ATOM 327 CH2 TRP 36 -3.583 48.229 10.702 1.00 8.36 ATOM 328 CZ2 TRP 36 -4.510 47.448 11.307 1.00 8.36 ATOM 330 N ILE 37 -0.350 41.295 10.531 1.00 7.77 ATOM 329 CA ILE 37 0.730 40.397 10.472 1.00 7.77 ATOM 332 CB ILE 37 0.209 38.942 10.547 1.00 7.77 ATOM 333 C ILE 37 1.468 40.634 9.193 1.00 7.77 ATOM 334 O ILE 37 2.665 40.829 9.196 1.00 7.77 ATOM 335 CG1 ILE 37 -0.424 38.715 11.889 1.00 7.77 ATOM 336 CD1 ILE 37 0.528 38.956 13.045 1.00 7.77 ATOM 337 CG2 ILE 37 1.320 37.909 10.315 1.00 7.77 ATOM 339 N SER 38 0.762 40.714 8.142 1.00 7.87 ATOM 338 CA SER 38 1.353 40.872 6.823 1.00 7.87 ATOM 341 CB SER 38 0.244 40.789 5.793 1.00 7.87 ATOM 342 C SER 38 2.080 42.235 6.698 1.00 7.87 ATOM 343 O SER 38 3.032 42.354 5.936 1.00 7.87 ATOM 344 OG SER 38 -0.422 39.503 5.866 1.00 7.87 ATOM 346 N SER 39 1.576 43.288 7.388 1.00 7.84 ATOM 345 CA SER 39 2.239 44.600 7.432 1.00 7.84 ATOM 348 CB SER 39 1.343 45.605 7.970 1.00 7.84 ATOM 349 C SER 39 3.453 44.547 8.283 1.00 7.84 ATOM 350 O SER 39 4.450 45.134 7.955 1.00 7.84 ATOM 351 OG SER 39 0.297 45.743 7.152 1.00 7.84 ATOM 353 N PHE 40 3.377 43.783 9.374 1.00 7.54 ATOM 352 CA PHE 40 4.466 43.657 10.343 1.00 7.54 ATOM 355 CB PHE 40 3.979 42.818 11.589 1.00 7.54 ATOM 356 C PHE 40 5.609 42.966 9.702 1.00 7.54 ATOM 357 O PHE 40 6.752 43.354 9.882 1.00 7.54 ATOM 358 CG PHE 40 3.453 43.626 12.782 1.00 7.54 ATOM 359 CD1 PHE 40 2.261 44.359 12.681 1.00 7.54 ATOM 360 CE1 PHE 40 1.743 45.024 13.786 1.00 7.54 ATOM 361 CZ PHE 40 2.368 44.910 15.002 1.00 7.54 ATOM 362 CD2 PHE 40 4.120 43.611 13.989 1.00 7.54 ATOM 363 CE2 PHE 40 3.605 44.277 15.091 1.00 7.54 ATOM 365 N ILE 41 5.281 42.009 8.915 1.00 6.99 ATOM 364 CA ILE 41 6.235 41.146 8.236 1.00 6.99 ATOM 367 CB ILE 41 5.800 39.634 8.240 1.00 6.99 ATOM 368 C ILE 41 6.338 41.639 6.863 1.00 6.99 ATOM 369 O ILE 41 5.329 42.008 6.285 1.00 6.99 ATOM 370 CG1 ILE 41 5.672 39.120 9.697 1.00 6.99 ATOM 371 CD1 ILE 41 6.960 39.078 10.403 1.00 6.99 ATOM 372 CG2 ILE 41 6.887 38.819 7.530 1.00 6.99 ATOM 374 N GLY 42 7.504 41.718 6.323 1.00 6.71 ATOM 373 CA GLY 42 7.663 42.324 5.018 1.00 6.71 ATOM 376 C GLY 42 8.212 43.701 5.039 1.00 6.71 ATOM 377 O GLY 42 8.174 44.422 4.009 1.00 6.71 ATOM 379 N ARG 43 8.659 44.118 6.189 1.00 6.32 ATOM 378 CA ARG 43 9.336 45.371 6.285 1.00 6.32 ATOM 381 CB ARG 43 8.394 46.455 6.762 1.00 6.32 ATOM 382 C ARG 43 10.573 45.183 7.224 1.00 6.32 ATOM 383 O ARG 43 10.422 44.684 8.365 1.00 6.32 ATOM 384 CG ARG 43 6.948 46.072 6.572 1.00 6.32 ATOM 385 CD ARG 43 5.977 47.225 6.395 1.00 6.32 ATOM 386 NE ARG 43 5.894 47.611 5.013 1.00 6.32 ATOM 388 CZ ARG 43 5.086 47.046 4.131 1.00 6.32 ATOM 389 NH1 ARG 43 4.217 46.102 4.527 1.00 6.32 ATOM 390 NH2 ARG 43 5.168 47.362 2.853 1.00 6.32 ATOM 392 N SER 44 11.799 45.546 6.741 1.00 5.56 ATOM 391 CA SER 44 13.064 45.275 7.532 1.00 5.56 ATOM 394 CB SER 44 14.328 45.711 6.716 1.00 5.56 ATOM 395 C SER 44 13.088 45.988 8.831 1.00 5.56 ATOM 396 O SER 44 13.494 45.426 9.831 1.00 5.56 ATOM 397 OG SER 44 14.506 44.909 5.563 1.00 5.56 ATOM 399 N LYS 45 12.594 47.163 8.838 1.00 4.97 ATOM 398 CA LYS 45 12.638 48.007 9.991 1.00 4.97 ATOM 401 CB LYS 45 11.768 47.385 11.146 1.00 4.97 ATOM 402 C LYS 45 14.110 48.204 10.560 1.00 4.97 ATOM 403 O LYS 45 14.875 49.076 10.090 1.00 4.97 ATOM 404 CG LYS 45 10.238 47.268 10.873 1.00 4.97 ATOM 405 CD LYS 45 9.507 46.696 12.134 1.00 4.97 ATOM 406 CE LYS 45 7.978 46.558 11.944 1.00 4.97 ATOM 407 NZ LYS 45 7.313 47.885 11.751 1.00 4.97 TER END