####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS460_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.49 4.49 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 9 - 29 1.99 5.72 LCS_AVERAGE: 36.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.88 LCS_AVERAGE: 16.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 3 3 3 4 14 22 26 29 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 7 44 4 4 8 11 13 22 26 29 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 7 44 3 4 8 12 16 23 26 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 3 7 44 3 5 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 3 7 44 2 3 4 7 17 23 29 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 3 7 44 3 3 4 8 9 16 25 34 35 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 3 12 44 3 3 6 10 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 21 44 8 10 13 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 21 44 8 10 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 21 44 8 10 10 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 21 44 8 10 11 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 21 44 8 10 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 21 44 8 10 11 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 21 44 8 10 11 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 21 44 8 10 11 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 21 44 5 10 11 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 21 44 3 3 4 9 17 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 21 44 3 4 4 8 15 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 21 44 10 12 13 15 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 21 44 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 17 44 4 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 17 44 5 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 17 44 3 3 3 5 6 14 24 28 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 17 44 3 3 5 14 19 25 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 17 44 3 3 3 5 8 14 18 23 27 33 35 40 41 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 17 44 3 3 12 14 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 5 17 44 3 4 9 15 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 5 10 44 4 4 9 16 21 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 4 8 16 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 7 10 44 4 6 9 17 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 7 10 44 4 6 8 11 16 23 30 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 7 10 44 4 7 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 7 10 44 4 6 8 11 11 11 20 29 34 37 40 40 41 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 7 10 44 4 6 8 11 11 11 13 15 16 26 31 36 41 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 7 10 44 3 6 8 11 11 11 12 14 15 19 22 27 31 35 37 40 43 43 43 43 LCS_GDT K 45 K 45 7 10 44 0 3 7 11 11 11 12 14 14 16 18 22 24 26 31 35 37 38 38 42 LCS_AVERAGE LCS_A: 51.05 ( 16.94 36.21 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 18 22 26 32 35 36 39 40 40 41 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 27.27 31.82 40.91 50.00 59.09 72.73 79.55 81.82 88.64 90.91 90.91 93.18 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.33 0.54 1.21 1.45 1.73 2.00 2.37 2.62 2.72 2.98 3.13 3.13 3.27 3.54 3.54 3.54 3.93 3.93 3.93 3.93 GDT RMS_ALL_AT 5.83 5.88 4.74 4.81 4.86 5.02 5.13 4.94 4.94 4.80 4.71 4.71 4.70 4.61 4.61 4.61 4.53 4.53 4.53 4.53 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.911 0 0.057 0.078 6.486 0.000 0.000 - LGA V 3 V 3 5.249 0 0.227 1.019 6.217 1.818 1.039 6.217 LGA Q 4 Q 4 4.307 0 0.067 0.659 6.234 13.182 5.859 5.009 LGA G 5 G 5 1.771 0 0.172 0.172 4.688 24.545 24.545 - LGA P 6 P 6 4.471 0 0.341 0.346 5.606 4.545 2.857 5.606 LGA W 7 W 7 5.389 0 0.397 1.039 11.383 2.727 0.779 11.383 LGA V 8 V 8 2.890 0 0.131 0.881 6.094 35.000 24.156 3.431 LGA G 9 G 9 2.452 0 0.510 0.510 2.452 55.000 55.000 - LGA S 10 S 10 0.263 0 0.133 0.161 1.332 78.182 76.667 1.332 LGA S 11 S 11 3.084 0 0.057 0.595 4.377 27.727 22.424 3.329 LGA Y 12 Y 12 2.167 0 0.118 0.868 10.566 51.818 19.394 10.566 LGA V 13 V 13 0.975 0 0.062 1.129 4.788 74.545 61.818 4.788 LGA A 14 A 14 2.906 0 0.009 0.014 3.636 26.818 25.091 - LGA E 15 E 15 3.073 0 0.097 1.172 4.813 22.727 18.384 4.368 LGA T 16 T 16 1.303 0 0.193 0.274 1.681 61.818 68.052 0.569 LGA G 17 G 17 2.263 0 0.669 0.669 3.203 36.364 36.364 - LGA Q 18 Q 18 3.601 0 0.577 0.488 8.100 11.818 5.253 8.001 LGA N 19 N 19 3.491 0 0.249 1.205 9.753 29.545 14.773 7.111 LGA W 20 W 20 3.186 0 0.377 0.678 9.978 33.636 9.740 9.978 LGA A 21 A 21 1.693 0 0.077 0.072 2.274 55.000 54.182 - LGA S 22 S 22 1.452 0 0.041 0.615 2.038 61.818 56.061 1.778 LGA L 23 L 23 1.753 0 0.099 1.403 6.253 58.182 34.318 4.812 LGA A 24 A 24 1.782 0 0.031 0.029 2.087 54.545 51.273 - LGA A 25 A 25 0.852 0 0.051 0.051 1.154 73.636 78.909 - LGA N 26 N 26 0.594 0 0.081 0.338 1.361 82.273 80.227 1.155 LGA E 27 E 27 1.322 0 0.094 0.779 3.218 59.091 41.616 3.177 LGA L 28 L 28 1.918 0 0.190 1.406 5.250 41.818 26.364 5.250 LGA R 29 R 29 1.864 0 0.222 1.501 10.891 54.545 22.479 10.891 LGA V 30 V 30 1.700 0 0.266 1.157 2.993 58.182 49.870 2.993 LGA T 31 T 31 1.808 0 0.711 0.901 6.278 41.364 27.792 3.208 LGA E 32 E 32 5.300 0 0.327 1.060 9.611 6.818 3.030 9.611 LGA R 33 R 33 3.984 0 0.046 1.121 7.761 4.091 5.620 5.773 LGA P 34 P 34 6.713 0 0.661 0.629 7.786 0.000 0.000 7.786 LGA F 35 F 35 3.169 0 0.557 0.889 10.202 18.182 7.603 10.202 LGA W 36 W 36 3.621 0 0.590 0.535 8.506 23.636 6.753 8.358 LGA I 37 I 37 3.627 0 0.155 0.864 6.592 27.727 14.091 6.592 LGA S 38 S 38 2.339 0 0.053 0.639 5.909 38.636 26.667 5.909 LGA S 39 S 39 2.871 0 0.154 0.684 4.824 28.182 22.121 4.747 LGA F 40 F 40 3.588 0 0.076 0.475 9.792 19.091 7.438 9.291 LGA I 41 I 41 1.426 0 0.111 0.645 5.531 34.091 24.091 5.531 LGA G 42 G 42 7.479 0 0.091 0.091 11.145 0.455 0.455 - LGA R 43 R 43 10.485 0 0.109 0.786 16.874 0.000 0.000 16.874 LGA S 44 S 44 13.648 0 0.630 0.618 14.911 0.000 0.000 14.082 LGA K 45 K 45 17.765 0 0.422 0.932 20.979 0.000 0.000 20.979 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.489 4.488 5.979 32.572 25.299 10.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 35 2.62 60.795 58.025 1.289 LGA_LOCAL RMSD: 2.616 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.936 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.489 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.715321 * X + -0.524926 * Y + -0.461268 * Z + 33.171921 Y_new = 0.349526 * X + -0.302817 * Y + 0.886642 * Z + -27.907473 Z_new = -0.605101 * X + -0.795459 * Y + -0.033137 * Z + 95.364067 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.454508 0.649893 -1.612429 [DEG: 26.0414 37.2361 -92.3854 ] ZXZ: -2.661883 1.603939 -2.491282 [DEG: -152.5146 91.8989 -142.7400 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS460_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 35 2.62 58.025 4.49 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS460_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 9.202 41.206 12.683 1.00 11.19 ATOM 8 CA ALA 2 9.282 41.645 11.324 1.00 11.19 ATOM 11 CB ALA 2 9.346 43.184 11.257 1.00 11.19 ATOM 12 C ALA 2 10.489 41.050 10.613 1.00 11.19 ATOM 13 O ALA 2 11.575 40.890 11.199 1.00 11.19 ATOM 15 N VAL 3 10.263 40.681 9.413 1.00 9.72 ATOM 14 CA VAL 3 11.259 40.219 8.499 1.00 9.72 ATOM 17 CB VAL 3 11.478 38.717 8.477 1.00 9.72 ATOM 18 C VAL 3 10.915 40.764 7.189 1.00 9.72 ATOM 19 O VAL 3 10.037 41.528 7.100 1.00 9.72 ATOM 20 CG1 VAL 3 12.080 38.245 9.818 1.00 9.72 ATOM 21 CG2 VAL 3 10.184 37.993 8.187 1.00 9.72 ATOM 23 N GLN 4 11.621 40.435 6.181 1.00 9.19 ATOM 22 CA GLN 4 11.277 40.905 4.883 1.00 9.19 ATOM 25 CB GLN 4 12.478 41.467 4.127 1.00 9.19 ATOM 26 C GLN 4 10.435 39.879 4.116 1.00 9.19 ATOM 27 O GLN 4 10.381 38.702 4.485 1.00 9.19 ATOM 28 CG GLN 4 13.517 42.074 5.069 1.00 9.19 ATOM 29 CD GLN 4 14.722 41.250 5.345 1.00 9.19 ATOM 30 NE2 GLN 4 15.903 41.933 5.353 1.00 9.19 ATOM 33 OE1 GLN 4 14.625 40.032 5.625 1.00 9.19 ATOM 35 N GLY 5 9.761 40.348 3.140 1.00 9.13 ATOM 34 CA GLY 5 8.807 39.572 2.382 1.00 9.13 ATOM 37 C GLY 5 7.406 40.041 2.738 1.00 9.13 ATOM 38 O GLY 5 7.050 40.024 3.894 1.00 9.13 ATOM 40 N PRO 6 6.555 40.388 1.712 1.00 9.37 ATOM 39 CA PRO 6 5.135 40.890 1.934 1.00 9.37 ATOM 41 CB PRO 6 4.841 41.573 0.637 1.00 9.37 ATOM 42 C PRO 6 4.133 39.811 2.209 1.00 9.37 ATOM 43 O PRO 6 3.085 39.713 1.544 1.00 9.37 ATOM 44 CG PRO 6 5.542 40.699 -0.371 1.00 9.37 ATOM 45 CD PRO 6 6.865 40.292 0.310 1.00 9.37 ATOM 47 N TRP 7 4.393 39.061 3.190 1.00 9.85 ATOM 46 CA TRP 7 3.558 37.951 3.569 1.00 9.85 ATOM 49 CB TRP 7 3.507 36.887 2.440 1.00 9.85 ATOM 50 C TRP 7 3.964 37.383 4.830 1.00 9.85 ATOM 51 O TRP 7 5.108 37.341 5.103 1.00 9.85 ATOM 52 CG TRP 7 2.620 35.627 2.713 1.00 9.85 ATOM 53 CD1 TRP 7 3.034 34.332 2.667 1.00 9.85 ATOM 54 NE1 TRP 7 1.991 33.488 3.005 1.00 9.85 ATOM 56 CD2 TRP 7 1.226 35.598 3.119 1.00 9.85 ATOM 57 CE2 TRP 7 0.893 34.243 3.344 1.00 9.85 ATOM 58 CE3 TRP 7 0.319 36.579 3.492 1.00 9.85 ATOM 59 CZ3 TRP 7 -0.857 36.196 4.165 1.00 9.85 ATOM 60 CH2 TRP 7 -1.139 34.851 4.413 1.00 9.85 ATOM 61 CZ2 TRP 7 -0.319 33.858 3.969 1.00 9.85 ATOM 63 N VAL 8 3.019 36.910 5.597 1.00 9.53 ATOM 62 CA VAL 8 3.318 36.235 6.839 1.00 9.53 ATOM 65 CB VAL 8 2.076 35.524 7.408 1.00 9.53 ATOM 66 C VAL 8 4.419 35.225 6.544 1.00 9.53 ATOM 67 O VAL 8 5.407 35.214 7.221 1.00 9.53 ATOM 68 CG1 VAL 8 1.804 34.286 6.610 1.00 9.53 ATOM 69 CG2 VAL 8 2.282 35.141 8.878 1.00 9.53 ATOM 71 N GLY 9 4.196 34.381 5.540 1.00 9.81 ATOM 70 CA GLY 9 5.216 33.382 5.007 1.00 9.81 ATOM 73 C GLY 9 5.045 31.946 5.481 1.00 9.81 ATOM 74 O GLY 9 4.581 31.699 6.571 1.00 9.81 ATOM 76 N SER 10 5.520 31.016 4.697 1.00 9.44 ATOM 75 CA SER 10 5.305 29.657 4.999 1.00 9.44 ATOM 78 CB SER 10 5.808 28.796 3.869 1.00 9.44 ATOM 79 C SER 10 5.997 29.261 6.241 1.00 9.44 ATOM 80 O SER 10 5.410 28.673 7.073 1.00 9.44 ATOM 81 OG SER 10 7.213 28.914 3.764 1.00 9.44 ATOM 83 N SER 11 7.185 29.657 6.455 1.00 9.67 ATOM 82 CA SER 11 7.826 29.194 7.629 1.00 9.67 ATOM 85 CB SER 11 9.274 29.534 7.606 1.00 9.67 ATOM 86 C SER 11 7.214 29.811 8.821 1.00 9.67 ATOM 87 O SER 11 7.115 29.193 9.837 1.00 9.67 ATOM 88 OG SER 11 9.434 30.890 7.706 1.00 9.67 ATOM 90 N TYR 12 6.712 31.019 8.689 1.00 9.91 ATOM 89 CA TYR 12 6.130 31.674 9.789 1.00 9.91 ATOM 92 CB TYR 12 6.057 33.206 9.623 1.00 9.91 ATOM 93 C TYR 12 4.891 30.964 10.185 1.00 9.91 ATOM 94 O TYR 12 4.728 30.637 11.328 1.00 9.91 ATOM 95 CG TYR 12 5.625 33.970 10.880 1.00 9.91 ATOM 96 CD1 TYR 12 6.071 33.558 12.133 1.00 9.91 ATOM 97 CE1 TYR 12 5.716 34.256 13.290 1.00 9.91 ATOM 98 CZ TYR 12 4.963 35.408 13.186 1.00 9.91 ATOM 99 CD2 TYR 12 4.869 35.132 10.801 1.00 9.91 ATOM 100 CE2 TYR 12 4.515 35.844 11.950 1.00 9.91 ATOM 101 OH TYR 12 4.662 36.142 14.330 1.00 9.91 ATOM 103 N VAL 13 4.035 30.602 9.207 1.00 9.34 ATOM 102 CA VAL 13 2.835 29.874 9.528 1.00 9.34 ATOM 105 CB VAL 13 1.917 29.781 8.435 1.00 9.34 ATOM 106 C VAL 13 3.184 28.525 10.080 1.00 9.34 ATOM 107 O VAL 13 2.658 28.146 10.997 1.00 9.34 ATOM 108 CG1 VAL 13 1.403 31.161 8.055 1.00 9.34 ATOM 109 CG2 VAL 13 2.528 29.087 7.260 1.00 9.34 ATOM 111 N ALA 14 4.154 27.881 9.549 1.00 9.42 ATOM 110 CA ALA 14 4.588 26.573 10.080 1.00 9.42 ATOM 113 CB ALA 14 5.706 26.037 9.243 1.00 9.42 ATOM 114 C ALA 14 5.058 26.699 11.527 1.00 9.42 ATOM 115 O ALA 14 4.719 25.856 12.364 1.00 9.42 ATOM 117 N GLU 15 5.795 27.794 11.862 1.00 9.24 ATOM 116 CA GLU 15 6.222 27.998 13.191 1.00 9.24 ATOM 119 CB GLU 15 7.173 29.210 13.360 1.00 9.24 ATOM 120 C GLU 15 5.146 28.190 14.062 1.00 9.24 ATOM 121 O GLU 15 5.201 27.741 15.145 1.00 9.24 ATOM 122 CG GLU 15 8.551 29.013 12.897 1.00 9.24 ATOM 123 CD GLU 15 9.430 30.241 13.158 1.00 9.24 ATOM 124 OE1 GLU 15 10.421 30.165 14.046 1.00 9.24 ATOM 125 OE2 GLU 15 9.177 31.288 12.520 1.00 9.24 ATOM 127 N THR 16 4.123 28.923 13.623 1.00 8.67 ATOM 126 CA THR 16 3.051 29.246 14.470 1.00 8.67 ATOM 129 CB THR 16 2.485 30.621 14.119 1.00 8.67 ATOM 130 C THR 16 1.960 28.159 14.479 1.00 8.67 ATOM 131 O THR 16 1.567 27.671 15.573 1.00 8.67 ATOM 132 CG2 THR 16 3.515 31.706 14.364 1.00 8.67 ATOM 133 OG1 THR 16 2.129 30.650 12.753 1.00 8.67 ATOM 135 N GLY 17 1.476 27.742 13.270 1.00 7.84 ATOM 134 CA GLY 17 0.537 26.654 13.211 1.00 7.84 ATOM 137 C GLY 17 -0.326 26.562 11.960 1.00 7.84 ATOM 138 O GLY 17 -0.227 27.367 11.048 1.00 7.84 ATOM 140 N GLN 18 -1.268 25.578 11.956 1.00 7.38 ATOM 139 CA GLN 18 -2.148 25.380 10.785 1.00 7.38 ATOM 142 CB GLN 18 -2.509 23.918 10.564 1.00 7.38 ATOM 143 C GLN 18 -3.371 26.254 10.846 1.00 7.38 ATOM 144 O GLN 18 -4.329 26.039 10.126 1.00 7.38 ATOM 145 CG GLN 18 -1.356 22.993 10.783 1.00 7.38 ATOM 146 CD GLN 18 -0.269 23.221 9.746 1.00 7.38 ATOM 147 NE2 GLN 18 0.941 23.487 10.203 1.00 7.38 ATOM 150 OE1 GLN 18 -0.535 23.206 8.534 1.00 7.38 ATOM 152 N ASN 19 -3.311 27.268 11.664 1.00 6.95 ATOM 151 CA ASN 19 -4.368 28.250 11.749 1.00 6.95 ATOM 154 CB ASN 19 -4.847 28.363 13.205 1.00 6.95 ATOM 155 C ASN 19 -3.742 29.553 11.224 1.00 6.95 ATOM 156 O ASN 19 -4.260 30.689 11.395 1.00 6.95 ATOM 157 CG ASN 19 -6.284 28.796 13.301 1.00 6.95 ATOM 158 ND2 ASN 19 -6.673 29.372 14.419 1.00 6.95 ATOM 161 OD1 ASN 19 -7.093 28.541 12.367 1.00 6.95 ATOM 163 N TRP 20 -2.613 29.295 10.545 1.00 6.63 ATOM 162 CA TRP 20 -1.742 30.248 9.902 1.00 6.63 ATOM 165 CB TRP 20 -2.189 30.282 8.453 1.00 6.63 ATOM 166 C TRP 20 -1.772 31.702 10.432 1.00 6.63 ATOM 167 O TRP 20 -1.453 31.978 11.591 1.00 6.63 ATOM 168 CG TRP 20 -1.697 29.183 7.630 1.00 6.63 ATOM 169 CD1 TRP 20 -1.764 27.834 7.904 1.00 6.63 ATOM 170 NE1 TRP 20 -1.276 27.123 6.847 1.00 6.63 ATOM 172 CD2 TRP 20 -1.156 29.300 6.350 1.00 6.63 ATOM 173 CE2 TRP 20 -0.928 27.980 5.866 1.00 6.63 ATOM 174 CE3 TRP 20 -0.870 30.353 5.547 1.00 6.63 ATOM 175 CZ3 TRP 20 -0.329 30.108 4.313 1.00 6.63 ATOM 176 CH2 TRP 20 -0.112 28.805 3.870 1.00 6.63 ATOM 177 CZ2 TRP 20 -0.400 27.739 4.643 1.00 6.63 ATOM 179 N ALA 21 -2.196 32.620 9.555 1.00 6.61 ATOM 178 CA ALA 21 -2.161 34.047 9.839 1.00 6.61 ATOM 181 CB ALA 21 -2.509 34.919 8.577 1.00 6.61 ATOM 182 C ALA 21 -2.987 34.391 11.007 1.00 6.61 ATOM 183 O ALA 21 -2.546 35.110 11.842 1.00 6.61 ATOM 185 N SER 22 -4.143 33.799 11.152 1.00 7.11 ATOM 184 CA SER 22 -5.002 34.143 12.296 1.00 7.11 ATOM 187 CB SER 22 -6.251 33.342 12.186 1.00 7.11 ATOM 188 C SER 22 -4.311 33.758 13.588 1.00 7.11 ATOM 189 O SER 22 -4.247 34.542 14.525 1.00 7.11 ATOM 190 OG SER 22 -6.938 33.683 11.018 1.00 7.11 ATOM 192 N LEU 23 -3.701 32.604 13.593 1.00 7.36 ATOM 191 CA LEU 23 -3.027 32.128 14.771 1.00 7.36 ATOM 194 CB LEU 23 -2.584 30.715 14.611 1.00 7.36 ATOM 195 C LEU 23 -1.921 33.003 15.095 1.00 7.36 ATOM 196 O LEU 23 -1.768 33.360 16.199 1.00 7.36 ATOM 197 CG LEU 23 -1.856 30.106 15.739 1.00 7.36 ATOM 198 CD1 LEU 23 -2.733 30.109 16.962 1.00 7.36 ATOM 199 CD2 LEU 23 -1.499 28.676 15.370 1.00 7.36 ATOM 201 N ALA 24 -1.172 33.444 14.070 1.00 7.47 ATOM 200 CA ALA 24 -0.033 34.300 14.266 1.00 7.47 ATOM 203 CB ALA 24 0.674 34.567 12.920 1.00 7.47 ATOM 204 C ALA 24 -0.484 35.608 14.885 1.00 7.47 ATOM 205 O ALA 24 0.158 36.124 15.776 1.00 7.47 ATOM 207 N ALA 25 -1.669 36.139 14.458 1.00 7.50 ATOM 206 CA ALA 25 -2.150 37.383 15.001 1.00 7.50 ATOM 209 CB ALA 25 -3.421 37.807 14.307 1.00 7.50 ATOM 210 C ALA 25 -2.417 37.230 16.415 1.00 7.50 ATOM 211 O ALA 25 -1.960 38.034 17.224 1.00 7.50 ATOM 213 N ASN 26 -3.072 36.127 16.773 1.00 7.34 ATOM 212 CA ASN 26 -3.415 35.874 18.140 1.00 7.34 ATOM 215 CB ASN 26 -4.298 34.642 18.198 1.00 7.34 ATOM 216 C ASN 26 -2.238 35.688 18.946 1.00 7.34 ATOM 217 O ASN 26 -2.124 36.262 19.961 1.00 7.34 ATOM 218 CG ASN 26 -5.739 34.939 17.758 1.00 7.34 ATOM 219 ND2 ASN 26 -6.257 34.154 16.821 1.00 7.34 ATOM 222 OD1 ASN 26 -6.354 35.917 18.213 1.00 7.34 ATOM 224 N GLU 27 -1.310 34.982 18.468 1.00 7.54 ATOM 223 CA GLU 27 -0.094 34.746 19.199 1.00 7.54 ATOM 226 CB GLU 27 0.780 33.747 18.382 1.00 7.54 ATOM 227 C GLU 27 0.671 36.083 19.467 1.00 7.54 ATOM 228 O GLU 27 1.153 36.320 20.572 1.00 7.54 ATOM 229 CG GLU 27 2.133 33.451 18.946 1.00 7.54 ATOM 230 CD GLU 27 2.111 32.731 20.317 1.00 7.54 ATOM 231 OE1 GLU 27 1.007 32.434 20.823 1.00 7.54 ATOM 232 OE2 GLU 27 3.200 32.447 20.858 1.00 7.54 ATOM 234 N LEU 28 0.724 36.941 18.481 1.00 7.68 ATOM 233 CA LEU 28 1.388 38.188 18.595 1.00 7.68 ATOM 236 CB LEU 28 1.547 38.840 17.212 1.00 7.68 ATOM 237 C LEU 28 0.659 39.114 19.585 1.00 7.68 ATOM 238 O LEU 28 1.286 39.951 20.272 1.00 7.68 ATOM 239 CG LEU 28 2.340 40.128 17.163 1.00 7.68 ATOM 240 CD1 LEU 28 3.755 39.873 17.585 1.00 7.68 ATOM 241 CD2 LEU 28 2.297 40.722 15.758 1.00 7.68 ATOM 243 N ARG 29 -0.666 38.988 19.594 1.00 8.36 ATOM 242 CA ARG 29 -1.530 39.835 20.316 1.00 8.36 ATOM 245 CB ARG 29 -1.302 40.000 21.802 1.00 8.36 ATOM 246 C ARG 29 -1.648 41.046 19.652 1.00 8.36 ATOM 247 O ARG 29 -1.217 42.091 20.101 1.00 8.36 ATOM 248 CG ARG 29 -2.672 39.958 22.656 1.00 8.36 ATOM 249 CD ARG 29 -3.425 38.568 22.675 1.00 8.36 ATOM 250 NE ARG 29 -3.878 38.193 21.385 1.00 8.36 ATOM 252 CZ ARG 29 -5.135 38.295 20.879 1.00 8.36 ATOM 253 NH1 ARG 29 -6.180 38.719 21.592 1.00 8.36 ATOM 254 NH2 ARG 29 -5.271 37.944 19.689 1.00 8.36 ATOM 256 N VAL 30 -2.170 40.924 18.560 1.00 8.42 ATOM 255 CA VAL 30 -2.493 41.951 17.834 1.00 8.42 ATOM 258 CB VAL 30 -1.684 42.137 16.544 1.00 8.42 ATOM 259 C VAL 30 -3.820 41.736 17.542 1.00 8.42 ATOM 260 O VAL 30 -4.310 40.567 17.706 1.00 8.42 ATOM 261 CG1 VAL 30 -0.253 42.457 16.842 1.00 8.42 ATOM 262 CG2 VAL 30 -1.779 40.903 15.675 1.00 8.42 ATOM 264 N THR 31 -4.509 42.749 17.191 1.00 8.66 ATOM 263 CA THR 31 -5.869 42.598 16.831 1.00 8.66 ATOM 266 CB THR 31 -6.421 43.875 16.230 1.00 8.66 ATOM 267 C THR 31 -5.951 41.443 15.847 1.00 8.66 ATOM 268 O THR 31 -5.008 41.194 15.121 1.00 8.66 ATOM 269 CG2 THR 31 -7.967 43.811 16.112 1.00 8.66 ATOM 270 OG1 THR 31 -6.048 44.960 17.093 1.00 8.66 ATOM 272 N GLU 32 -7.033 40.710 15.842 1.00 8.99 ATOM 271 CA GLU 32 -7.094 39.513 15.015 1.00 8.99 ATOM 274 CB GLU 32 -8.108 38.478 15.561 1.00 8.99 ATOM 275 C GLU 32 -7.479 39.811 13.639 1.00 8.99 ATOM 276 O GLU 32 -8.553 39.469 13.212 1.00 8.99 ATOM 277 CG GLU 32 -7.837 37.976 16.930 1.00 8.99 ATOM 278 CD GLU 32 -8.421 38.759 18.087 1.00 8.99 ATOM 279 OE1 GLU 32 -8.249 38.280 19.280 1.00 8.99 ATOM 280 OE2 GLU 32 -9.097 39.810 17.847 1.00 8.99 ATOM 282 N ARG 33 -6.602 40.512 12.932 1.00 8.84 ATOM 281 CA ARG 33 -6.767 40.793 11.554 1.00 8.84 ATOM 284 CB ARG 33 -7.207 42.327 11.202 1.00 8.84 ATOM 285 C ARG 33 -5.434 40.477 10.916 1.00 8.84 ATOM 286 O ARG 33 -4.374 41.066 11.304 1.00 8.84 ATOM 287 CG ARG 33 -7.915 43.193 12.298 1.00 8.84 ATOM 288 CD ARG 33 -9.523 43.146 12.372 1.00 8.84 ATOM 289 NE ARG 33 -10.026 41.946 13.026 1.00 8.84 ATOM 291 CZ ARG 33 -11.254 41.738 13.502 1.00 8.84 ATOM 292 NH1 ARG 33 -12.228 42.657 13.363 1.00 8.84 ATOM 293 NH2 ARG 33 -11.485 40.601 14.178 1.00 8.84 ATOM 295 N PRO 34 -5.444 39.649 9.942 1.00 8.85 ATOM 294 CA PRO 34 -4.183 39.222 9.219 1.00 8.85 ATOM 296 CB PRO 34 -4.680 38.235 8.217 1.00 8.85 ATOM 297 C PRO 34 -3.380 40.347 8.577 1.00 8.85 ATOM 298 O PRO 34 -2.187 40.196 8.329 1.00 8.85 ATOM 299 CG PRO 34 -6.128 38.627 8.028 1.00 8.85 ATOM 300 CD PRO 34 -6.604 39.038 9.393 1.00 8.85 ATOM 302 N PHE 35 -3.970 41.441 8.406 1.00 8.38 ATOM 301 CA PHE 35 -3.312 42.569 7.847 1.00 8.38 ATOM 304 CB PHE 35 -4.198 43.758 7.740 1.00 8.38 ATOM 305 C PHE 35 -2.201 42.938 8.633 1.00 8.38 ATOM 306 O PHE 35 -1.106 43.114 8.106 1.00 8.38 ATOM 307 CG PHE 35 -3.445 44.855 7.179 1.00 8.38 ATOM 308 CD1 PHE 35 -3.034 44.812 5.905 1.00 8.38 ATOM 309 CE1 PHE 35 -2.353 45.879 5.347 1.00 8.38 ATOM 310 CZ PHE 35 -2.152 47.009 6.080 1.00 8.38 ATOM 311 CD2 PHE 35 -3.113 45.931 7.939 1.00 8.38 ATOM 312 CE2 PHE 35 -2.442 47.011 7.383 1.00 8.38 ATOM 314 N TRP 36 -2.368 43.008 9.918 1.00 8.30 ATOM 313 CA TRP 36 -1.303 43.478 10.670 1.00 8.30 ATOM 316 CB TRP 36 -1.626 43.634 12.057 1.00 8.30 ATOM 317 C TRP 36 -0.159 42.565 10.526 1.00 8.30 ATOM 318 O TRP 36 0.923 43.017 10.330 1.00 8.30 ATOM 319 CG TRP 36 -2.715 44.537 12.197 1.00 8.30 ATOM 320 CD1 TRP 36 -3.976 44.233 12.588 1.00 8.30 ATOM 321 NE1 TRP 36 -4.764 45.315 12.483 1.00 8.30 ATOM 323 CD2 TRP 36 -2.717 45.860 11.863 1.00 8.30 ATOM 324 CE2 TRP 36 -4.063 46.310 11.970 1.00 8.30 ATOM 325 CE3 TRP 36 -1.781 46.697 11.272 1.00 8.30 ATOM 326 CZ3 TRP 36 -2.195 47.857 10.747 1.00 8.30 ATOM 327 CH2 TRP 36 -3.554 48.219 10.764 1.00 8.30 ATOM 328 CZ2 TRP 36 -4.490 47.436 11.351 1.00 8.30 ATOM 330 N ILE 37 -0.374 41.260 10.514 1.00 7.75 ATOM 329 CA ILE 37 0.706 40.369 10.444 1.00 7.75 ATOM 332 CB ILE 37 0.202 38.920 10.522 1.00 7.75 ATOM 333 C ILE 37 1.422 40.618 9.155 1.00 7.75 ATOM 334 O ILE 37 2.607 40.813 9.137 1.00 7.75 ATOM 335 CG1 ILE 37 -0.457 38.689 11.869 1.00 7.75 ATOM 336 CD1 ILE 37 0.465 38.934 13.058 1.00 7.75 ATOM 337 CG2 ILE 37 1.336 37.917 10.341 1.00 7.75 ATOM 339 N SER 38 0.713 40.710 8.111 1.00 7.77 ATOM 338 CA SER 38 1.324 40.886 6.788 1.00 7.77 ATOM 341 CB SER 38 0.232 40.837 5.754 1.00 7.77 ATOM 342 C SER 38 2.072 42.257 6.695 1.00 7.77 ATOM 343 O SER 38 3.064 42.387 5.940 1.00 7.77 ATOM 344 OG SER 38 -0.452 39.551 5.800 1.00 7.77 ATOM 346 N SER 39 1.562 43.297 7.390 1.00 7.79 ATOM 345 CA SER 39 2.240 44.607 7.467 1.00 7.79 ATOM 348 CB SER 39 1.343 45.603 8.010 1.00 7.79 ATOM 349 C SER 39 3.455 44.516 8.344 1.00 7.79 ATOM 350 O SER 39 4.487 45.102 8.053 1.00 7.79 ATOM 351 OG SER 39 0.299 45.745 7.183 1.00 7.79 ATOM 353 N PHE 40 3.346 43.728 9.391 1.00 7.53 ATOM 352 CA PHE 40 4.413 43.546 10.368 1.00 7.53 ATOM 355 CB PHE 40 3.914 42.737 11.583 1.00 7.53 ATOM 356 C PHE 40 5.514 42.842 9.772 1.00 7.53 ATOM 357 O PHE 40 6.625 43.122 10.046 1.00 7.53 ATOM 358 CG PHE 40 3.451 43.551 12.769 1.00 7.53 ATOM 359 CD1 PHE 40 2.235 44.257 12.725 1.00 7.53 ATOM 360 CE1 PHE 40 1.769 44.935 13.840 1.00 7.53 ATOM 361 CZ PHE 40 2.469 44.870 15.021 1.00 7.53 ATOM 362 CD2 PHE 40 4.188 43.575 13.933 1.00 7.53 ATOM 363 CE2 PHE 40 3.723 44.256 15.053 1.00 7.53 ATOM 365 N ILE 41 5.211 41.965 8.922 1.00 7.00 ATOM 364 CA ILE 41 6.198 41.108 8.252 1.00 7.00 ATOM 367 CB ILE 41 5.789 39.584 8.267 1.00 7.00 ATOM 368 C ILE 41 6.355 41.618 6.870 1.00 7.00 ATOM 369 O ILE 41 5.359 42.002 6.265 1.00 7.00 ATOM 370 CG1 ILE 41 5.646 39.067 9.747 1.00 7.00 ATOM 371 CD1 ILE 41 6.963 39.066 10.537 1.00 7.00 ATOM 372 CG2 ILE 41 6.865 38.772 7.580 1.00 7.00 ATOM 374 N GLY 42 7.547 41.710 6.362 1.00 6.71 ATOM 373 CA GLY 42 7.756 42.340 5.018 1.00 6.71 ATOM 376 C GLY 42 8.288 43.716 5.052 1.00 6.71 ATOM 377 O GLY 42 8.289 44.427 4.026 1.00 6.71 ATOM 379 N ARG 43 8.687 44.127 6.179 1.00 6.36 ATOM 378 CA ARG 43 9.326 45.377 6.293 1.00 6.36 ATOM 381 CB ARG 43 8.334 46.432 6.795 1.00 6.36 ATOM 382 C ARG 43 10.541 45.173 7.247 1.00 6.36 ATOM 383 O ARG 43 10.376 44.660 8.390 1.00 6.36 ATOM 384 CG ARG 43 6.880 46.011 6.599 1.00 6.36 ATOM 385 CD ARG 43 5.916 47.172 6.425 1.00 6.36 ATOM 386 NE ARG 43 5.873 47.577 5.080 1.00 6.36 ATOM 388 CZ ARG 43 5.084 47.039 4.169 1.00 6.36 ATOM 389 NH1 ARG 43 4.185 46.092 4.522 1.00 6.36 ATOM 390 NH2 ARG 43 5.208 47.381 2.907 1.00 6.36 ATOM 392 N SER 44 11.771 45.509 6.771 1.00 5.59 ATOM 391 CA SER 44 13.037 45.222 7.582 1.00 5.59 ATOM 394 CB SER 44 14.334 45.596 6.782 1.00 5.59 ATOM 395 C SER 44 13.071 45.943 8.870 1.00 5.59 ATOM 396 O SER 44 13.481 45.385 9.870 1.00 5.59 ATOM 397 OG SER 44 14.525 44.746 5.681 1.00 5.59 ATOM 399 N LYS 45 12.585 47.125 8.871 1.00 5.02 ATOM 398 CA LYS 45 12.637 47.970 10.021 1.00 5.02 ATOM 401 CB LYS 45 11.782 47.344 11.178 1.00 5.02 ATOM 402 C LYS 45 14.104 48.171 10.584 1.00 5.02 ATOM 403 O LYS 45 14.866 49.037 10.109 1.00 5.02 ATOM 404 CG LYS 45 10.280 47.249 10.928 1.00 5.02 ATOM 405 CD LYS 45 9.555 46.675 12.183 1.00 5.02 ATOM 406 CE LYS 45 8.035 46.574 11.988 1.00 5.02 ATOM 407 NZ LYS 45 7.415 47.929 11.788 1.00 5.02 TER END