####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS460_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.48 4.48 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 9 - 29 1.99 5.71 LCS_AVERAGE: 36.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 3 3 3 4 14 22 26 30 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 7 44 4 4 8 11 13 23 26 30 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 7 44 3 4 8 12 16 23 26 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 3 7 44 3 5 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 3 7 44 2 3 4 7 17 23 29 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 3 7 44 3 3 4 8 9 16 25 34 35 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 3 12 44 3 3 6 10 21 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 21 44 8 10 13 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 21 44 8 10 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 21 44 8 10 10 16 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 21 44 8 10 11 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 21 44 8 10 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 21 44 8 10 11 16 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 21 44 8 10 11 16 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 21 44 8 10 11 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 21 44 5 10 11 16 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 21 44 3 3 4 9 17 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 21 44 3 4 4 8 15 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 21 44 10 12 13 16 21 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 21 44 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 17 44 4 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 17 44 5 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 17 44 3 3 3 5 6 14 24 28 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 17 44 3 3 5 14 19 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 17 44 3 3 3 5 8 14 18 23 27 33 35 40 42 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 17 44 3 3 12 14 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 5 17 44 3 4 8 15 21 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 5 10 44 4 4 8 16 21 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 4 8 17 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 7 10 44 4 6 8 17 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 7 10 44 4 6 8 11 16 23 30 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 7 10 44 4 7 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 7 10 44 4 6 8 11 11 11 20 29 34 37 40 40 42 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 7 10 44 4 6 8 11 11 11 13 14 16 26 31 36 42 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 7 10 44 3 6 8 11 11 11 12 14 15 19 22 27 31 35 39 41 43 43 43 43 LCS_GDT K 45 K 45 7 10 44 0 3 7 11 11 11 12 14 14 16 18 22 24 26 28 35 37 38 40 42 LCS_AVERAGE LCS_A: 51.05 ( 16.94 36.21 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 18 22 26 31 35 36 39 40 40 42 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 27.27 31.82 40.91 50.00 59.09 70.45 79.55 81.82 88.64 90.91 90.91 95.45 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.33 0.54 1.21 1.45 1.73 2.00 2.31 2.61 2.71 2.98 3.13 3.13 3.53 3.53 3.53 3.53 3.92 3.92 3.92 3.92 GDT RMS_ALL_AT 5.82 5.87 4.73 4.81 4.85 5.01 5.12 4.93 4.93 4.79 4.70 4.70 4.60 4.60 4.60 4.60 4.52 4.52 4.52 4.52 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.880 0 0.062 0.080 6.462 0.000 0.000 - LGA V 3 V 3 5.213 0 0.227 1.017 6.152 1.818 1.039 6.152 LGA Q 4 Q 4 4.275 0 0.067 0.656 6.188 13.182 6.061 4.973 LGA G 5 G 5 1.754 0 0.173 0.173 4.682 24.545 24.545 - LGA P 6 P 6 4.465 0 0.343 0.347 5.610 4.545 2.857 5.610 LGA W 7 W 7 5.393 0 0.387 1.043 11.362 2.727 0.779 11.362 LGA V 8 V 8 2.888 0 0.125 0.884 6.044 35.000 24.156 3.428 LGA G 9 G 9 2.468 0 0.512 0.512 2.468 55.000 55.000 - LGA S 10 S 10 0.249 0 0.132 0.159 1.326 78.182 76.667 1.326 LGA S 11 S 11 3.073 0 0.059 0.594 4.360 27.727 22.424 3.310 LGA Y 12 Y 12 2.168 0 0.119 0.872 10.580 51.818 19.394 10.580 LGA V 13 V 13 0.987 0 0.063 1.132 4.794 74.545 61.818 4.794 LGA A 14 A 14 2.913 0 0.015 0.017 3.653 26.818 23.636 - LGA E 15 E 15 3.080 0 0.097 1.175 4.830 22.727 18.384 4.381 LGA T 16 T 16 1.295 0 0.194 0.275 1.677 61.818 68.052 0.565 LGA G 17 G 17 2.254 0 0.669 0.669 3.193 36.364 36.364 - LGA Q 18 Q 18 3.584 0 0.576 0.487 8.074 11.818 5.253 7.983 LGA N 19 N 19 3.497 0 0.252 1.206 9.768 29.545 14.773 7.127 LGA W 20 W 20 3.186 0 0.380 0.679 10.004 37.273 10.779 10.004 LGA A 21 A 21 1.699 0 0.077 0.072 2.275 55.000 54.182 - LGA S 22 S 22 1.452 0 0.038 0.615 2.033 61.818 56.061 1.788 LGA L 23 L 23 1.767 0 0.099 1.401 6.261 58.182 34.318 4.824 LGA A 24 A 24 1.792 0 0.028 0.027 2.097 54.545 51.273 - LGA A 25 A 25 0.852 0 0.050 0.050 1.155 73.636 78.909 - LGA N 26 N 26 0.587 0 0.082 0.334 1.368 82.273 80.227 1.156 LGA E 27 E 27 1.315 0 0.094 0.778 3.245 59.091 41.616 3.178 LGA L 28 L 28 1.912 0 0.190 1.405 5.233 41.818 26.364 5.233 LGA R 29 R 29 1.860 0 0.222 1.500 10.887 54.545 22.479 10.887 LGA V 30 V 30 1.695 0 0.267 1.156 2.993 58.182 49.870 2.993 LGA T 31 T 31 1.809 0 0.711 0.902 6.274 41.364 27.792 3.206 LGA E 32 E 32 5.316 0 0.327 1.060 9.620 6.818 3.030 9.620 LGA R 33 R 33 3.992 0 0.047 1.120 7.767 4.091 5.620 5.766 LGA P 34 P 34 6.714 0 0.660 0.628 7.786 0.000 0.000 7.786 LGA F 35 F 35 3.168 0 0.557 0.888 10.203 18.182 7.603 10.203 LGA W 36 W 36 3.619 0 0.591 0.535 8.532 23.636 6.753 8.385 LGA I 37 I 37 3.611 0 0.154 0.860 6.605 27.727 14.091 6.605 LGA S 38 S 38 2.310 0 0.052 0.624 5.814 38.636 26.667 5.814 LGA S 39 S 39 2.860 0 0.156 0.685 4.804 28.182 22.121 4.739 LGA F 40 F 40 3.565 0 0.076 0.484 9.784 19.091 7.438 9.280 LGA I 41 I 41 1.429 0 0.107 0.649 5.545 34.091 24.091 5.545 LGA G 42 G 42 7.471 0 0.086 0.086 11.130 0.455 0.455 - LGA R 43 R 43 10.468 0 0.109 0.790 16.853 0.000 0.000 16.853 LGA S 44 S 44 13.598 0 0.632 0.616 14.848 0.000 0.000 14.023 LGA K 45 K 45 17.742 0 0.423 0.932 20.963 0.000 0.000 20.963 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.481 4.480 5.973 32.655 25.294 10.753 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 35 2.61 60.795 57.966 1.291 LGA_LOCAL RMSD: 2.611 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.926 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.481 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.715190 * X + -0.525072 * Y + -0.461305 * Z + 33.188427 Y_new = 0.349726 * X + -0.302603 * Y + 0.886636 * Z + -27.933693 Z_new = -0.605140 * X + -0.795444 * Y + -0.032787 * Z + 95.340370 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.454807 0.649942 -1.611992 [DEG: 26.0585 37.2389 -92.3603 ] ZXZ: -2.661848 1.603590 -2.491242 [DEG: -152.5126 91.8789 -142.7377 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS460_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS460_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 35 2.61 57.966 4.48 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS460_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 9.201 41.179 12.679 1.00 11.17 ATOM 8 CA ALA 2 9.279 41.612 11.326 1.00 11.17 ATOM 11 CB ALA 2 9.340 43.151 11.261 1.00 11.17 ATOM 12 C ALA 2 10.486 41.013 10.608 1.00 11.17 ATOM 13 O ALA 2 11.572 40.853 11.181 1.00 11.17 ATOM 15 N VAL 3 10.253 40.646 9.415 1.00 9.70 ATOM 14 CA VAL 3 11.243 40.182 8.501 1.00 9.70 ATOM 17 CB VAL 3 11.443 38.676 8.461 1.00 9.70 ATOM 18 C VAL 3 10.904 40.736 7.197 1.00 9.70 ATOM 19 O VAL 3 10.031 41.507 7.110 1.00 9.70 ATOM 20 CG1 VAL 3 12.035 38.178 9.779 1.00 9.70 ATOM 21 CG2 VAL 3 10.148 37.972 8.160 1.00 9.70 ATOM 23 N GLN 4 11.606 40.404 6.190 1.00 9.18 ATOM 22 CA GLN 4 11.268 40.878 4.897 1.00 9.18 ATOM 25 CB GLN 4 12.467 41.435 4.144 1.00 9.18 ATOM 26 C GLN 4 10.421 39.853 4.125 1.00 9.18 ATOM 27 O GLN 4 10.360 38.676 4.492 1.00 9.18 ATOM 28 CG GLN 4 13.508 42.033 5.088 1.00 9.18 ATOM 29 CD GLN 4 14.709 41.208 5.352 1.00 9.18 ATOM 30 NE2 GLN 4 15.893 41.886 5.359 1.00 9.18 ATOM 33 OE1 GLN 4 14.611 39.993 5.621 1.00 9.18 ATOM 35 N GLY 5 9.751 40.325 3.149 1.00 9.11 ATOM 34 CA GLY 5 8.796 39.551 2.390 1.00 9.11 ATOM 37 C GLY 5 7.402 40.017 2.749 1.00 9.11 ATOM 38 O GLY 5 7.044 39.990 3.907 1.00 9.11 ATOM 40 N PRO 6 6.552 40.375 1.722 1.00 9.34 ATOM 39 CA PRO 6 5.135 40.877 1.947 1.00 9.34 ATOM 41 CB PRO 6 4.842 41.571 0.653 1.00 9.34 ATOM 42 C PRO 6 4.131 39.800 2.214 1.00 9.34 ATOM 43 O PRO 6 3.084 39.703 1.541 1.00 9.34 ATOM 44 CG PRO 6 5.542 40.707 -0.363 1.00 9.34 ATOM 45 CD PRO 6 6.862 40.289 0.315 1.00 9.34 ATOM 47 N TRP 7 4.387 39.052 3.190 1.00 9.86 ATOM 46 CA TRP 7 3.546 37.948 3.564 1.00 9.86 ATOM 49 CB TRP 7 3.489 36.892 2.434 1.00 9.86 ATOM 50 C TRP 7 3.941 37.370 4.836 1.00 9.86 ATOM 51 O TRP 7 5.093 37.292 5.120 1.00 9.86 ATOM 52 CG TRP 7 2.607 35.629 2.704 1.00 9.86 ATOM 53 CD1 TRP 7 3.031 34.334 2.653 1.00 9.86 ATOM 54 NE1 TRP 7 1.993 33.481 2.983 1.00 9.86 ATOM 56 CD2 TRP 7 1.213 35.589 3.112 1.00 9.86 ATOM 57 CE2 TRP 7 0.887 34.228 3.325 1.00 9.86 ATOM 58 CE3 TRP 7 0.297 36.558 3.486 1.00 9.86 ATOM 59 CZ3 TRP 7 -0.884 36.158 4.137 1.00 9.86 ATOM 60 CH2 TRP 7 -1.149 34.810 4.385 1.00 9.86 ATOM 61 CZ2 TRP 7 -0.314 33.832 3.957 1.00 9.86 ATOM 63 N VAL 8 3.004 36.914 5.583 1.00 9.57 ATOM 62 CA VAL 8 3.301 36.243 6.820 1.00 9.57 ATOM 65 CB VAL 8 2.078 35.536 7.396 1.00 9.57 ATOM 66 C VAL 8 4.412 35.234 6.533 1.00 9.57 ATOM 67 O VAL 8 5.392 35.217 7.223 1.00 9.57 ATOM 68 CG1 VAL 8 1.798 34.291 6.603 1.00 9.57 ATOM 69 CG2 VAL 8 2.315 35.161 8.845 1.00 9.57 ATOM 71 N GLY 9 4.200 34.395 5.531 1.00 9.85 ATOM 70 CA GLY 9 5.228 33.404 5.006 1.00 9.85 ATOM 73 C GLY 9 5.055 31.971 5.477 1.00 9.85 ATOM 74 O GLY 9 4.587 31.722 6.572 1.00 9.85 ATOM 76 N SER 10 5.529 31.035 4.693 1.00 9.51 ATOM 75 CA SER 10 5.307 29.674 4.997 1.00 9.51 ATOM 78 CB SER 10 5.803 28.808 3.866 1.00 9.51 ATOM 79 C SER 10 5.995 29.275 6.240 1.00 9.51 ATOM 80 O SER 10 5.403 28.686 7.069 1.00 9.51 ATOM 81 OG SER 10 7.208 28.917 3.754 1.00 9.51 ATOM 83 N SER 11 7.183 29.670 6.456 1.00 9.74 ATOM 82 CA SER 11 7.824 29.205 7.631 1.00 9.74 ATOM 85 CB SER 11 9.269 29.550 7.610 1.00 9.74 ATOM 86 C SER 11 7.213 29.819 8.821 1.00 9.74 ATOM 87 O SER 11 7.116 29.202 9.836 1.00 9.74 ATOM 88 OG SER 11 9.428 30.907 7.713 1.00 9.74 ATOM 90 N TYR 12 6.712 31.025 8.689 1.00 10.00 ATOM 89 CA TYR 12 6.133 31.677 9.788 1.00 10.00 ATOM 92 CB TYR 12 6.058 33.204 9.623 1.00 10.00 ATOM 93 C TYR 12 4.895 30.968 10.186 1.00 10.00 ATOM 94 O TYR 12 4.733 30.635 11.331 1.00 10.00 ATOM 95 CG TYR 12 5.622 33.965 10.884 1.00 10.00 ATOM 96 CD1 TYR 12 6.079 33.557 12.132 1.00 10.00 ATOM 97 CE1 TYR 12 5.731 34.254 13.289 1.00 10.00 ATOM 98 CZ TYR 12 4.975 35.403 13.190 1.00 10.00 ATOM 99 CD2 TYR 12 4.849 35.122 10.810 1.00 10.00 ATOM 100 CE2 TYR 12 4.504 35.831 11.958 1.00 10.00 ATOM 101 OH TYR 12 4.683 36.137 14.333 1.00 10.00 ATOM 103 N VAL 13 4.035 30.612 9.209 1.00 9.41 ATOM 102 CA VAL 13 2.834 29.888 9.532 1.00 9.41 ATOM 105 CB VAL 13 1.925 29.794 8.443 1.00 9.41 ATOM 106 C VAL 13 3.179 28.538 10.080 1.00 9.41 ATOM 107 O VAL 13 2.655 28.158 10.999 1.00 9.41 ATOM 108 CG1 VAL 13 1.413 31.170 8.049 1.00 9.41 ATOM 109 CG2 VAL 13 2.542 29.086 7.279 1.00 9.41 ATOM 111 N ALA 14 4.147 27.891 9.546 1.00 9.49 ATOM 110 CA ALA 14 4.576 26.580 10.072 1.00 9.49 ATOM 113 CB ALA 14 5.698 26.039 9.231 1.00 9.49 ATOM 114 C ALA 14 5.042 26.701 11.512 1.00 9.49 ATOM 115 O ALA 14 4.697 25.859 12.349 1.00 9.49 ATOM 117 N GLU 15 5.789 27.794 11.853 1.00 9.30 ATOM 116 CA GLU 15 6.219 27.992 13.185 1.00 9.30 ATOM 119 CB GLU 15 7.176 29.199 13.356 1.00 9.30 ATOM 120 C GLU 15 5.147 28.187 14.057 1.00 9.30 ATOM 121 O GLU 15 5.203 27.734 15.139 1.00 9.30 ATOM 122 CG GLU 15 8.541 28.996 12.882 1.00 9.30 ATOM 123 CD GLU 15 9.438 30.234 13.152 1.00 9.30 ATOM 124 OE1 GLU 15 10.427 30.151 14.046 1.00 9.30 ATOM 125 OE2 GLU 15 9.190 31.293 12.516 1.00 9.30 ATOM 127 N THR 16 4.129 28.925 13.623 1.00 8.71 ATOM 126 CA THR 16 3.061 29.249 14.474 1.00 8.71 ATOM 129 CB THR 16 2.496 30.626 14.126 1.00 8.71 ATOM 130 C THR 16 1.970 28.167 14.487 1.00 8.71 ATOM 131 O THR 16 1.582 27.678 15.584 1.00 8.71 ATOM 132 CG2 THR 16 3.524 31.706 14.371 1.00 8.71 ATOM 133 OG1 THR 16 2.131 30.658 12.758 1.00 8.71 ATOM 135 N GLY 17 1.481 27.752 13.282 1.00 7.84 ATOM 134 CA GLY 17 0.539 26.669 13.227 1.00 7.84 ATOM 137 C GLY 17 -0.328 26.580 11.980 1.00 7.84 ATOM 138 O GLY 17 -0.233 27.385 11.073 1.00 7.84 ATOM 140 N GLN 18 -1.271 25.590 11.972 1.00 7.37 ATOM 139 CA GLN 18 -2.150 25.392 10.802 1.00 7.37 ATOM 142 CB GLN 18 -2.508 23.928 10.576 1.00 7.37 ATOM 143 C GLN 18 -3.373 26.266 10.860 1.00 7.37 ATOM 144 O GLN 18 -4.333 26.047 10.141 1.00 7.37 ATOM 145 CG GLN 18 -1.356 23.004 10.798 1.00 7.37 ATOM 146 CD GLN 18 -0.264 23.234 9.768 1.00 7.37 ATOM 147 NE2 GLN 18 0.943 23.497 10.232 1.00 7.37 ATOM 150 OE1 GLN 18 -0.523 23.221 8.554 1.00 7.37 ATOM 152 N ASN 19 -3.314 27.281 11.673 1.00 6.91 ATOM 151 CA ASN 19 -4.370 28.259 11.753 1.00 6.91 ATOM 154 CB ASN 19 -4.847 28.378 13.209 1.00 6.91 ATOM 155 C ASN 19 -3.745 29.564 11.219 1.00 6.91 ATOM 156 O ASN 19 -4.261 30.702 11.391 1.00 6.91 ATOM 157 CG ASN 19 -6.282 28.816 13.310 1.00 6.91 ATOM 158 ND2 ASN 19 -6.666 29.400 14.430 1.00 6.91 ATOM 161 OD1 ASN 19 -7.094 28.559 12.380 1.00 6.91 ATOM 163 N TRP 20 -2.620 29.304 10.535 1.00 6.61 ATOM 162 CA TRP 20 -1.743 30.255 9.904 1.00 6.61 ATOM 165 CB TRP 20 -2.176 30.288 8.455 1.00 6.61 ATOM 166 C TRP 20 -1.771 31.710 10.430 1.00 6.61 ATOM 167 O TRP 20 -1.451 31.990 11.587 1.00 6.61 ATOM 168 CG TRP 20 -1.688 29.183 7.640 1.00 6.61 ATOM 169 CD1 TRP 20 -1.759 27.844 7.919 1.00 6.61 ATOM 170 NE1 TRP 20 -1.274 27.126 6.869 1.00 6.61 ATOM 172 CD2 TRP 20 -1.147 29.292 6.362 1.00 6.61 ATOM 173 CE2 TRP 20 -0.921 27.972 5.888 1.00 6.61 ATOM 174 CE3 TRP 20 -0.854 30.341 5.554 1.00 6.61 ATOM 175 CZ3 TRP 20 -0.302 30.088 4.325 1.00 6.61 ATOM 176 CH2 TRP 20 -0.076 28.786 3.895 1.00 6.61 ATOM 177 CZ2 TRP 20 -0.379 27.723 4.670 1.00 6.61 ATOM 179 N ALA 21 -2.194 32.628 9.550 1.00 6.57 ATOM 178 CA ALA 21 -2.155 34.056 9.833 1.00 6.57 ATOM 181 CB ALA 21 -2.499 34.928 8.568 1.00 6.57 ATOM 182 C ALA 21 -2.983 34.403 11.004 1.00 6.57 ATOM 183 O ALA 21 -2.538 35.123 11.837 1.00 6.57 ATOM 185 N SER 22 -4.140 33.811 11.151 1.00 7.09 ATOM 184 CA SER 22 -4.996 34.153 12.295 1.00 7.09 ATOM 187 CB SER 22 -6.246 33.356 12.185 1.00 7.09 ATOM 188 C SER 22 -4.303 33.764 13.585 1.00 7.09 ATOM 189 O SER 22 -4.240 34.545 14.524 1.00 7.09 ATOM 190 OG SER 22 -6.930 33.702 11.017 1.00 7.09 ATOM 192 N LEU 23 -3.689 32.607 13.586 1.00 7.33 ATOM 191 CA LEU 23 -3.013 32.128 14.763 1.00 7.33 ATOM 194 CB LEU 23 -2.563 30.712 14.598 1.00 7.33 ATOM 195 C LEU 23 -1.911 33.006 15.089 1.00 7.33 ATOM 196 O LEU 23 -1.759 33.361 16.192 1.00 7.33 ATOM 197 CG LEU 23 -1.834 30.102 15.724 1.00 7.33 ATOM 198 CD1 LEU 23 -2.712 30.111 16.951 1.00 7.33 ATOM 199 CD2 LEU 23 -1.490 28.679 15.363 1.00 7.33 ATOM 201 N ALA 24 -1.163 33.452 14.063 1.00 7.44 ATOM 200 CA ALA 24 -0.024 34.309 14.260 1.00 7.44 ATOM 203 CB ALA 24 0.683 34.577 12.910 1.00 7.44 ATOM 204 C ALA 24 -0.478 35.619 14.882 1.00 7.44 ATOM 205 O ALA 24 0.162 36.135 15.774 1.00 7.44 ATOM 207 N ALA 25 -1.662 36.147 14.456 1.00 7.48 ATOM 206 CA ALA 25 -2.145 37.383 15.001 1.00 7.48 ATOM 209 CB ALA 25 -3.414 37.808 14.304 1.00 7.48 ATOM 210 C ALA 25 -2.416 37.226 16.418 1.00 7.48 ATOM 211 O ALA 25 -1.962 38.028 17.231 1.00 7.48 ATOM 213 N ASN 26 -3.069 36.123 16.773 1.00 7.30 ATOM 212 CA ASN 26 -3.410 35.868 18.139 1.00 7.30 ATOM 215 CB ASN 26 -4.289 34.633 18.196 1.00 7.30 ATOM 216 C ASN 26 -2.231 35.682 18.944 1.00 7.30 ATOM 217 O ASN 26 -2.117 36.255 19.958 1.00 7.30 ATOM 218 CG ASN 26 -5.731 34.924 17.758 1.00 7.30 ATOM 219 ND2 ASN 26 -6.251 34.125 16.823 1.00 7.30 ATOM 222 OD1 ASN 26 -6.348 35.906 18.212 1.00 7.30 ATOM 224 N GLU 27 -1.302 34.979 18.464 1.00 7.49 ATOM 223 CA GLU 27 -0.087 34.743 19.195 1.00 7.49 ATOM 226 CB GLU 27 0.792 33.749 18.377 1.00 7.49 ATOM 227 C GLU 27 0.675 36.079 19.466 1.00 7.49 ATOM 228 O GLU 27 1.156 36.316 20.575 1.00 7.49 ATOM 229 CG GLU 27 2.144 33.463 18.940 1.00 7.49 ATOM 230 CD GLU 27 2.125 32.743 20.311 1.00 7.49 ATOM 231 OE1 GLU 27 1.023 32.426 20.810 1.00 7.49 ATOM 232 OE2 GLU 27 3.212 32.488 20.863 1.00 7.49 ATOM 234 N LEU 28 0.729 36.939 18.480 1.00 7.63 ATOM 233 CA LEU 28 1.392 38.182 18.594 1.00 7.63 ATOM 236 CB LEU 28 1.548 38.833 17.211 1.00 7.63 ATOM 237 C LEU 28 0.664 39.109 19.585 1.00 7.63 ATOM 238 O LEU 28 1.291 39.947 20.271 1.00 7.63 ATOM 239 CG LEU 28 2.338 40.115 17.160 1.00 7.63 ATOM 240 CD1 LEU 28 3.754 39.858 17.574 1.00 7.63 ATOM 241 CD2 LEU 28 2.290 40.708 15.757 1.00 7.63 ATOM 243 N ARG 29 -0.663 38.984 19.594 1.00 8.30 ATOM 242 CA ARG 29 -1.528 39.830 20.316 1.00 8.30 ATOM 245 CB ARG 29 -1.298 39.995 21.801 1.00 8.30 ATOM 246 C ARG 29 -1.647 41.041 19.651 1.00 8.30 ATOM 247 O ARG 29 -1.217 42.086 20.099 1.00 8.30 ATOM 248 CG ARG 29 -2.668 39.950 22.654 1.00 8.30 ATOM 249 CD ARG 29 -3.416 38.556 22.678 1.00 8.30 ATOM 250 NE ARG 29 -3.870 38.173 21.391 1.00 8.30 ATOM 252 CZ ARG 29 -5.129 38.281 20.881 1.00 8.30 ATOM 253 NH1 ARG 29 -6.173 38.714 21.591 1.00 8.30 ATOM 254 NH2 ARG 29 -5.265 37.932 19.689 1.00 8.30 ATOM 256 N VAL 30 -2.170 40.919 18.558 1.00 8.38 ATOM 255 CA VAL 30 -2.495 41.943 17.832 1.00 8.38 ATOM 258 CB VAL 30 -1.684 42.125 16.544 1.00 8.38 ATOM 259 C VAL 30 -3.822 41.726 17.539 1.00 8.38 ATOM 260 O VAL 30 -4.312 40.556 17.706 1.00 8.38 ATOM 261 CG1 VAL 30 -0.256 42.452 16.846 1.00 8.38 ATOM 262 CG2 VAL 30 -1.773 40.884 15.673 1.00 8.38 ATOM 264 N THR 31 -4.508 42.734 17.184 1.00 8.62 ATOM 263 CA THR 31 -5.867 42.583 16.825 1.00 8.62 ATOM 266 CB THR 31 -6.421 43.860 16.227 1.00 8.62 ATOM 267 C THR 31 -5.950 41.426 15.841 1.00 8.62 ATOM 268 O THR 31 -5.006 41.175 15.115 1.00 8.62 ATOM 269 CG2 THR 31 -7.967 43.795 16.111 1.00 8.62 ATOM 270 OG1 THR 31 -6.049 44.945 17.092 1.00 8.62 ATOM 272 N GLU 32 -7.031 40.693 15.838 1.00 8.93 ATOM 271 CA GLU 32 -7.095 39.497 15.012 1.00 8.93 ATOM 274 CB GLU 32 -8.109 38.461 15.560 1.00 8.93 ATOM 275 C GLU 32 -7.481 39.797 13.636 1.00 8.93 ATOM 276 O GLU 32 -8.556 39.455 13.209 1.00 8.93 ATOM 277 CG GLU 32 -7.837 37.959 16.930 1.00 8.93 ATOM 278 CD GLU 32 -8.418 38.745 18.088 1.00 8.93 ATOM 279 OE1 GLU 32 -8.244 38.269 19.282 1.00 8.93 ATOM 280 OE2 GLU 32 -9.095 39.795 17.848 1.00 8.93 ATOM 282 N ARG 33 -6.604 40.498 12.929 1.00 8.79 ATOM 281 CA ARG 33 -6.770 40.782 11.549 1.00 8.79 ATOM 284 CB ARG 33 -7.211 42.316 11.200 1.00 8.79 ATOM 285 C ARG 33 -5.436 40.468 10.911 1.00 8.79 ATOM 286 O ARG 33 -4.376 41.054 11.301 1.00 8.79 ATOM 287 CG ARG 33 -7.920 43.181 12.298 1.00 8.79 ATOM 288 CD ARG 33 -9.527 43.134 12.372 1.00 8.79 ATOM 289 NE ARG 33 -10.028 41.933 13.025 1.00 8.79 ATOM 291 CZ ARG 33 -11.254 41.726 13.507 1.00 8.79 ATOM 292 NH1 ARG 33 -12.226 42.647 13.373 1.00 8.79 ATOM 293 NH2 ARG 33 -11.484 40.588 14.181 1.00 8.79 ATOM 295 N PRO 34 -5.446 39.646 9.936 1.00 8.79 ATOM 294 CA PRO 34 -4.187 39.220 9.210 1.00 8.79 ATOM 296 CB PRO 34 -4.688 38.233 8.205 1.00 8.79 ATOM 297 C PRO 34 -3.386 40.347 8.567 1.00 8.79 ATOM 298 O PRO 34 -2.198 40.197 8.318 1.00 8.79 ATOM 299 CG PRO 34 -6.135 38.623 8.021 1.00 8.79 ATOM 300 CD PRO 34 -6.608 39.033 9.388 1.00 8.79 ATOM 302 N PHE 35 -3.976 41.440 8.398 1.00 8.32 ATOM 301 CA PHE 35 -3.319 42.569 7.843 1.00 8.32 ATOM 304 CB PHE 35 -4.204 43.758 7.742 1.00 8.32 ATOM 305 C PHE 35 -2.205 42.935 8.629 1.00 8.32 ATOM 306 O PHE 35 -1.110 43.115 8.104 1.00 8.32 ATOM 307 CG PHE 35 -3.449 44.858 7.188 1.00 8.32 ATOM 308 CD1 PHE 35 -3.034 44.821 5.912 1.00 8.32 ATOM 309 CE1 PHE 35 -2.350 45.892 5.360 1.00 8.32 ATOM 310 CZ PHE 35 -2.150 47.019 6.100 1.00 8.32 ATOM 311 CD2 PHE 35 -3.118 45.933 7.956 1.00 8.32 ATOM 312 CE2 PHE 35 -2.444 47.015 7.407 1.00 8.32 ATOM 314 N TRP 36 -2.373 43.000 9.917 1.00 8.22 ATOM 313 CA TRP 36 -1.309 43.469 10.669 1.00 8.22 ATOM 316 CB TRP 36 -1.632 43.622 12.055 1.00 8.22 ATOM 317 C TRP 36 -0.167 42.558 10.521 1.00 8.22 ATOM 318 O TRP 36 0.915 43.014 10.327 1.00 8.22 ATOM 319 CG TRP 36 -2.718 44.522 12.194 1.00 8.22 ATOM 320 CD1 TRP 36 -3.979 44.218 12.578 1.00 8.22 ATOM 321 NE1 TRP 36 -4.767 45.302 12.480 1.00 8.22 ATOM 323 CD2 TRP 36 -2.718 45.848 11.869 1.00 8.22 ATOM 324 CE2 TRP 36 -4.063 46.298 11.976 1.00 8.22 ATOM 325 CE3 TRP 36 -1.778 46.688 11.288 1.00 8.22 ATOM 326 CZ3 TRP 36 -2.187 47.853 10.774 1.00 8.22 ATOM 327 CH2 TRP 36 -3.546 48.218 10.790 1.00 8.22 ATOM 328 CZ2 TRP 36 -4.486 47.430 11.365 1.00 8.22 ATOM 330 N ILE 37 -0.382 41.245 10.503 1.00 7.70 ATOM 329 CA ILE 37 0.704 40.357 10.427 1.00 7.70 ATOM 332 CB ILE 37 0.228 38.900 10.516 1.00 7.70 ATOM 333 C ILE 37 1.420 40.614 9.149 1.00 7.70 ATOM 334 O ILE 37 2.596 40.801 9.140 1.00 7.70 ATOM 335 CG1 ILE 37 -0.414 38.683 11.873 1.00 7.70 ATOM 336 CD1 ILE 37 0.528 38.972 13.042 1.00 7.70 ATOM 337 CG2 ILE 37 1.371 37.914 10.341 1.00 7.70 ATOM 339 N SER 38 0.716 40.720 8.098 1.00 7.68 ATOM 338 CA SER 38 1.337 40.911 6.773 1.00 7.68 ATOM 341 CB SER 38 0.250 40.892 5.741 1.00 7.68 ATOM 342 C SER 38 2.077 42.263 6.694 1.00 7.68 ATOM 343 O SER 38 3.074 42.394 5.942 1.00 7.68 ATOM 344 OG SER 38 -0.436 39.648 5.774 1.00 7.68 ATOM 346 N SER 39 1.561 43.301 7.393 1.00 7.74 ATOM 345 CA SER 39 2.241 44.611 7.480 1.00 7.74 ATOM 348 CB SER 39 1.342 45.606 8.023 1.00 7.74 ATOM 349 C SER 39 3.455 44.513 8.360 1.00 7.74 ATOM 350 O SER 39 4.490 45.095 8.074 1.00 7.74 ATOM 351 OG SER 39 0.300 45.745 7.192 1.00 7.74 ATOM 353 N PHE 40 3.342 43.721 9.403 1.00 7.49 ATOM 352 CA PHE 40 4.409 43.525 10.377 1.00 7.49 ATOM 355 CB PHE 40 3.907 42.711 11.589 1.00 7.49 ATOM 356 C PHE 40 5.502 42.816 9.777 1.00 7.49 ATOM 357 O PHE 40 6.618 43.087 10.053 1.00 7.49 ATOM 358 CG PHE 40 3.446 43.523 12.772 1.00 7.49 ATOM 359 CD1 PHE 40 2.228 44.220 12.732 1.00 7.49 ATOM 360 CE1 PHE 40 1.766 44.904 13.847 1.00 7.49 ATOM 361 CZ PHE 40 2.476 44.854 15.021 1.00 7.49 ATOM 362 CD2 PHE 40 4.193 43.560 13.929 1.00 7.49 ATOM 363 CE2 PHE 40 3.733 44.245 15.048 1.00 7.49 ATOM 365 N ILE 41 5.196 41.950 8.924 1.00 7.02 ATOM 364 CA ILE 41 6.177 41.090 8.258 1.00 7.02 ATOM 367 CB ILE 41 5.757 39.573 8.269 1.00 7.02 ATOM 368 C ILE 41 6.346 41.605 6.873 1.00 7.02 ATOM 369 O ILE 41 5.364 41.983 6.265 1.00 7.02 ATOM 370 CG1 ILE 41 5.598 39.056 9.755 1.00 7.02 ATOM 371 CD1 ILE 41 6.928 39.053 10.550 1.00 7.02 ATOM 372 CG2 ILE 41 6.839 38.748 7.585 1.00 7.02 ATOM 374 N GLY 42 7.541 41.697 6.370 1.00 6.71 ATOM 373 CA GLY 42 7.757 42.331 5.025 1.00 6.71 ATOM 376 C GLY 42 8.302 43.705 5.061 1.00 6.71 ATOM 377 O GLY 42 8.329 44.411 4.032 1.00 6.71 ATOM 379 N ARG 43 8.692 44.116 6.189 1.00 6.36 ATOM 378 CA ARG 43 9.337 45.360 6.306 1.00 6.36 ATOM 381 CB ARG 43 8.347 46.418 6.805 1.00 6.36 ATOM 382 C ARG 43 10.545 45.148 7.266 1.00 6.36 ATOM 383 O ARG 43 10.371 44.632 8.406 1.00 6.36 ATOM 384 CG ARG 43 6.893 45.998 6.604 1.00 6.36 ATOM 385 CD ARG 43 5.924 47.157 6.439 1.00 6.36 ATOM 386 NE ARG 43 5.877 47.567 5.098 1.00 6.36 ATOM 388 CZ ARG 43 5.085 47.033 4.187 1.00 6.36 ATOM 389 NH1 ARG 43 4.190 46.088 4.538 1.00 6.36 ATOM 390 NH2 ARG 43 5.206 47.377 2.927 1.00 6.36 ATOM 392 N SER 44 11.781 45.475 6.797 1.00 5.56 ATOM 391 CA SER 44 13.042 45.180 7.618 1.00 5.56 ATOM 394 CB SER 44 14.341 45.545 6.830 1.00 5.56 ATOM 395 C SER 44 13.068 45.913 8.905 1.00 5.56 ATOM 396 O SER 44 13.471 45.363 9.919 1.00 5.56 ATOM 397 OG SER 44 14.535 44.703 5.730 1.00 5.56 ATOM 399 N LYS 45 12.587 47.097 8.891 1.00 4.96 ATOM 398 CA LYS 45 12.635 47.950 10.034 1.00 4.96 ATOM 401 CB LYS 45 11.780 47.327 11.192 1.00 4.96 ATOM 402 C LYS 45 14.101 48.156 10.597 1.00 4.96 ATOM 403 O LYS 45 14.862 49.021 10.122 1.00 4.96 ATOM 404 CG LYS 45 10.280 47.228 10.944 1.00 4.96 ATOM 405 CD LYS 45 9.560 46.658 12.201 1.00 4.96 ATOM 406 CE LYS 45 8.043 46.557 12.006 1.00 4.96 ATOM 407 NZ LYS 45 7.425 47.914 11.802 1.00 4.96 TER END