####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS458_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 2 - 20 4.91 21.40 LONGEST_CONTINUOUS_SEGMENT: 19 16 - 34 4.92 18.72 LONGEST_CONTINUOUS_SEGMENT: 19 17 - 35 4.77 18.87 LCS_AVERAGE: 40.60 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 7 - 17 1.69 21.60 LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.80 19.37 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.70 20.43 LCS_AVERAGE: 18.90 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 0.83 22.35 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.68 20.41 LCS_AVERAGE: 15.13 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 19 3 3 4 4 4 5 8 10 12 12 15 17 19 20 22 23 24 27 27 29 LCS_GDT V 3 V 3 4 5 19 3 3 4 4 5 6 8 10 12 13 15 17 19 20 23 24 26 27 30 30 LCS_GDT Q 4 Q 4 4 6 19 3 4 5 5 6 7 8 10 12 13 15 18 19 21 24 27 27 28 30 30 LCS_GDT G 5 G 5 4 6 19 0 4 5 5 6 7 8 10 11 12 15 18 19 21 24 27 27 28 30 30 LCS_GDT P 6 P 6 4 6 19 2 4 5 5 6 7 8 10 11 13 15 18 19 21 24 27 27 28 30 30 LCS_GDT W 7 W 7 4 11 19 2 4 5 5 8 11 11 11 12 13 15 18 19 21 24 27 27 28 30 30 LCS_GDT V 8 V 8 10 11 19 3 5 10 10 10 11 11 11 12 13 14 17 18 20 23 24 26 27 30 30 LCS_GDT G 9 G 9 10 11 19 6 8 10 10 10 11 11 11 12 13 13 15 16 20 22 23 25 27 30 30 LCS_GDT S 10 S 10 10 11 19 5 8 10 10 10 11 11 11 12 13 15 18 19 21 23 27 27 28 30 30 LCS_GDT S 11 S 11 10 11 19 5 8 10 10 10 11 11 11 12 13 15 18 19 21 24 27 27 28 30 30 LCS_GDT Y 12 Y 12 10 11 19 6 8 10 10 10 11 11 11 12 13 15 17 19 21 23 27 27 28 30 30 LCS_GDT V 13 V 13 10 11 19 6 8 10 10 10 11 11 11 12 13 15 18 19 21 24 27 27 28 30 30 LCS_GDT A 14 A 14 10 11 19 6 8 10 10 10 11 11 11 13 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT E 15 E 15 10 11 19 6 8 10 10 10 11 11 11 12 13 14 16 19 21 24 27 27 28 30 30 LCS_GDT T 16 T 16 10 11 19 6 8 10 10 10 11 11 11 12 13 13 15 19 21 23 27 27 28 30 30 LCS_GDT G 17 G 17 10 11 19 4 6 10 10 10 11 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT Q 18 Q 18 4 4 19 3 3 4 4 7 8 10 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT N 19 N 19 4 11 19 3 3 5 7 7 9 10 12 14 15 15 17 19 21 24 27 27 28 30 30 LCS_GDT W 20 W 20 10 11 19 7 10 10 10 10 10 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT A 21 A 21 10 11 19 7 10 10 10 10 10 11 11 13 14 15 18 19 21 24 27 27 28 30 30 LCS_GDT S 22 S 22 10 11 19 7 10 10 10 10 10 11 11 13 14 15 18 19 21 24 27 27 28 30 30 LCS_GDT L 23 L 23 10 11 19 7 10 10 10 10 10 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT A 24 A 24 10 11 19 7 10 10 10 10 10 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT A 25 A 25 10 11 19 7 10 10 10 10 10 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT N 26 N 26 10 11 19 7 10 10 10 10 10 11 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT E 27 E 27 10 11 19 5 10 10 10 10 10 11 11 13 14 14 16 16 18 19 20 25 28 30 30 LCS_GDT L 28 L 28 10 11 19 3 10 10 10 10 10 11 11 13 14 14 16 16 18 19 20 22 26 28 29 LCS_GDT R 29 R 29 10 11 19 3 10 10 10 10 10 11 12 14 15 15 16 18 21 24 27 27 28 30 30 LCS_GDT V 30 V 30 4 11 19 4 4 5 7 8 10 11 12 14 15 15 16 18 21 24 27 27 28 30 30 LCS_GDT T 31 T 31 4 6 19 4 4 5 7 7 8 10 12 14 15 15 16 18 21 24 27 27 28 30 30 LCS_GDT E 32 E 32 4 6 19 4 4 5 7 7 8 10 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT R 33 R 33 4 6 19 4 4 5 7 7 8 10 12 14 15 15 18 19 21 24 27 27 28 30 30 LCS_GDT P 34 P 34 4 6 19 3 4 4 6 6 8 9 12 14 15 15 16 18 21 24 27 27 28 29 30 LCS_GDT F 35 F 35 4 6 19 3 4 4 6 6 8 9 11 12 13 14 15 17 19 20 21 24 27 29 29 LCS_GDT W 36 W 36 4 6 14 3 4 4 6 6 8 9 11 12 12 13 13 15 17 19 21 22 23 25 26 LCS_GDT I 37 I 37 4 6 14 3 4 4 6 6 8 9 11 12 12 13 13 13 14 18 19 20 21 24 24 LCS_GDT S 38 S 38 4 6 14 0 3 4 6 6 7 8 11 12 12 13 13 13 15 18 19 20 21 24 24 LCS_GDT S 39 S 39 3 4 14 0 3 3 3 4 5 8 11 12 12 13 13 13 13 13 15 19 21 22 22 LCS_GDT F 40 F 40 3 4 14 3 3 3 3 4 5 8 11 12 12 13 13 13 13 13 15 15 16 18 20 LCS_GDT I 41 I 41 4 5 14 3 3 5 5 5 5 8 11 12 12 13 13 13 13 13 15 15 16 18 22 LCS_GDT G 42 G 42 4 5 14 3 3 5 5 5 5 8 11 12 12 13 13 13 13 13 15 15 16 20 21 LCS_GDT R 43 R 43 4 5 14 3 3 5 5 5 5 7 8 10 12 13 13 13 13 13 14 14 14 16 18 LCS_GDT S 44 S 44 4 5 14 3 3 5 5 5 5 7 9 12 12 13 13 13 13 13 14 14 14 16 18 LCS_GDT K 45 K 45 3 5 14 0 3 5 5 5 5 8 11 12 12 13 13 13 13 13 14 14 14 16 18 LCS_AVERAGE LCS_A: 24.88 ( 15.13 18.90 40.60 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 11 11 12 14 15 15 18 19 21 24 27 27 28 30 30 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 25.00 25.00 27.27 31.82 34.09 34.09 40.91 43.18 47.73 54.55 61.36 61.36 63.64 68.18 68.18 GDT RMS_LOCAL 0.29 0.68 0.68 0.68 0.68 1.69 1.69 2.67 3.20 3.60 3.60 4.68 4.79 5.10 5.61 5.92 5.92 6.10 6.49 6.45 GDT RMS_ALL_AT 20.97 20.41 20.41 20.41 20.41 21.60 21.60 19.20 18.72 18.22 18.22 17.94 17.99 17.66 17.38 17.44 17.44 17.37 17.67 17.46 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 24.619 0 0.553 0.579 26.945 0.000 0.000 - LGA V 3 V 3 20.620 0 0.639 0.548 22.646 0.000 0.000 19.860 LGA Q 4 Q 4 18.029 0 0.450 1.223 19.686 0.000 0.000 16.644 LGA G 5 G 5 17.115 0 0.274 0.274 18.116 0.000 0.000 - LGA P 6 P 6 18.079 0 0.462 0.425 18.485 0.000 0.000 17.834 LGA W 7 W 7 18.092 0 0.389 1.167 20.454 0.000 0.000 17.896 LGA V 8 V 8 21.684 0 0.643 0.771 24.623 0.000 0.000 24.257 LGA G 9 G 9 19.201 0 0.366 0.366 19.801 0.000 0.000 - LGA S 10 S 10 15.164 0 0.038 0.043 16.856 0.000 0.000 15.961 LGA S 11 S 11 15.595 0 0.046 0.708 19.773 0.000 0.000 19.773 LGA Y 12 Y 12 16.138 0 0.036 0.903 17.782 0.000 0.000 14.147 LGA V 13 V 13 11.671 0 0.031 0.134 13.334 0.000 0.000 10.038 LGA A 14 A 14 9.801 0 0.017 0.018 10.679 0.000 0.000 - LGA E 15 E 15 13.527 0 0.060 1.039 21.204 0.000 0.000 21.204 LGA T 16 T 16 12.291 0 0.126 1.044 14.780 0.000 0.000 11.854 LGA G 17 G 17 6.170 0 0.263 0.263 8.523 12.273 12.273 - LGA Q 18 Q 18 3.697 0 0.636 1.347 11.537 37.273 16.566 10.982 LGA N 19 N 19 1.423 0 0.081 0.396 6.240 52.273 31.136 5.608 LGA W 20 W 20 3.050 0 0.633 1.221 12.816 26.818 8.571 12.816 LGA A 21 A 21 7.046 0 0.042 0.041 9.532 0.000 0.000 - LGA S 22 S 22 6.265 0 0.033 0.638 9.313 2.727 1.818 9.313 LGA L 23 L 23 2.587 0 0.040 0.333 6.821 30.909 17.727 5.226 LGA A 24 A 24 4.010 0 0.019 0.021 6.042 18.182 14.545 - LGA A 25 A 25 3.680 0 0.043 0.041 5.765 36.364 29.091 - LGA N 26 N 26 3.586 0 0.040 0.796 9.298 16.818 8.409 7.513 LGA E 27 E 27 7.107 0 0.099 1.313 10.578 0.455 0.202 8.793 LGA L 28 L 28 6.993 0 0.222 0.889 12.438 0.000 0.000 12.438 LGA R 29 R 29 1.185 0 0.434 1.132 5.892 52.273 34.380 5.892 LGA V 30 V 30 1.917 0 0.146 1.013 4.505 54.545 44.675 4.505 LGA T 31 T 31 1.858 0 0.584 1.310 4.535 40.909 32.987 2.950 LGA E 32 E 32 1.432 0 0.668 1.204 6.770 60.000 31.717 6.770 LGA R 33 R 33 0.978 0 0.667 1.480 7.113 59.091 41.157 4.196 LGA P 34 P 34 6.447 0 0.391 0.485 8.715 1.364 0.779 7.627 LGA F 35 F 35 11.040 0 0.046 1.459 15.273 0.000 0.000 15.273 LGA W 36 W 36 17.801 0 0.088 0.289 19.369 0.000 0.000 16.846 LGA I 37 I 37 22.788 0 0.680 1.592 25.917 0.000 0.000 23.606 LGA S 38 S 38 28.569 0 0.578 0.482 30.777 0.000 0.000 29.176 LGA S 39 S 39 28.804 0 0.715 0.798 29.209 0.000 0.000 25.519 LGA F 40 F 40 31.273 0 0.620 1.341 35.271 0.000 0.000 26.618 LGA I 41 I 41 37.373 0 0.050 0.947 39.165 0.000 0.000 39.165 LGA G 42 G 42 41.513 0 0.544 0.544 43.566 0.000 0.000 - LGA R 43 R 43 40.836 0 0.134 0.972 41.561 0.000 0.000 39.041 LGA S 44 S 44 40.942 0 0.164 0.160 44.425 0.000 0.000 44.425 LGA K 45 K 45 37.217 0 0.085 0.367 38.242 0.000 0.000 35.516 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.435 13.332 14.300 11.415 7.410 0.987 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.67 33.523 28.032 0.433 LGA_LOCAL RMSD: 2.672 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.204 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.435 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.112537 * X + -0.767320 * Y + -0.631312 * Z + -20.029421 Y_new = 0.986217 * X + -0.008698 * Y + -0.165230 * Z + 62.523788 Z_new = 0.121293 * X + -0.641205 * Y + 0.757723 * Z + 24.387592 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.684414 -0.121592 -0.702299 [DEG: 96.5098 -6.9667 -40.2388 ] ZXZ: -1.314814 0.710979 2.954638 [DEG: -75.3333 40.7361 169.2883 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS458_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.67 28.032 13.44 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS458_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 4.485 16.401 2.123 1.00 10.12 N ATOM 14 CA ALA 2 4.461 16.079 0.685 1.00 10.12 C ATOM 15 CB ALA 2 3.058 15.583 0.288 1.00 10.12 C ATOM 16 C ALA 2 4.888 17.257 -0.213 1.00 10.12 C ATOM 17 O ALA 2 5.862 17.140 -0.966 1.00 10.12 O ATOM 18 N VAL 3 4.150 18.374 -0.115 1.00 10.15 N ATOM 20 CA VAL 3 4.367 19.617 -0.891 1.00 10.15 C ATOM 21 CB VAL 3 3.240 19.806 -2.001 1.00 10.15 C ATOM 22 CG1 VAL 3 3.519 21.036 -2.893 1.00 10.15 C ATOM 23 CG2 VAL 3 3.161 18.573 -2.904 1.00 10.15 C ATOM 24 C VAL 3 4.328 20.806 0.098 1.00 10.15 C ATOM 25 O VAL 3 4.831 21.898 -0.209 1.00 10.15 O ATOM 26 N GLN 4 3.792 20.550 1.303 1.00 10.14 N ATOM 28 CA GLN 4 3.596 21.514 2.418 1.00 10.14 C ATOM 29 CB GLN 4 4.853 21.678 3.331 1.00 10.14 C ATOM 30 CG GLN 4 6.182 22.179 2.697 1.00 10.14 C ATOM 31 CD GLN 4 7.184 21.062 2.417 1.00 10.14 C ATOM 32 OE1 GLN 4 7.867 20.583 3.324 1.00 10.14 O ATOM 33 NE2 GLN 4 7.279 20.653 1.157 1.00 10.14 N ATOM 36 C GLN 4 2.874 22.845 2.093 1.00 10.14 C ATOM 37 O GLN 4 3.421 23.943 2.277 1.00 10.14 O ATOM 38 N GLY 5 1.644 22.704 1.582 1.00 10.68 N ATOM 40 CA GLY 5 0.796 23.837 1.223 1.00 10.68 C ATOM 41 C GLY 5 0.848 24.283 -0.241 1.00 10.68 C ATOM 42 O GLY 5 1.858 24.893 -0.612 1.00 10.68 O ATOM 43 N PRO 6 -0.172 23.993 -1.105 1.00 11.78 N ATOM 44 CD PRO 6 -0.206 24.760 -2.373 1.00 11.78 C ATOM 45 CA PRO 6 -1.447 23.262 -0.917 1.00 11.78 C ATOM 46 CB PRO 6 -2.334 23.829 -2.030 1.00 11.78 C ATOM 47 CG PRO 6 -1.357 24.142 -3.130 1.00 11.78 C ATOM 48 C PRO 6 -1.347 21.710 -0.909 1.00 11.78 C ATOM 49 O PRO 6 -0.798 21.153 0.047 1.00 11.78 O ATOM 50 N TRP 7 -1.870 21.030 -1.953 1.00 10.76 N ATOM 52 CA TRP 7 -1.858 19.548 -2.118 1.00 10.76 C ATOM 53 CB TRP 7 -0.428 18.998 -2.360 1.00 10.76 C ATOM 54 CG TRP 7 -0.316 17.652 -3.135 1.00 10.76 C ATOM 55 CD2 TRP 7 -0.254 17.463 -4.567 1.00 10.76 C ATOM 56 CE2 TRP 7 -0.119 16.065 -4.798 1.00 10.76 C ATOM 57 CE3 TRP 7 -0.302 18.337 -5.680 1.00 10.76 C ATOM 58 CD1 TRP 7 -0.216 16.394 -2.586 1.00 10.76 C ATOM 59 NE1 TRP 7 -0.099 15.449 -3.575 1.00 10.76 N ATOM 61 CZ2 TRP 7 -0.029 15.511 -6.099 1.00 10.76 C ATOM 62 CZ3 TRP 7 -0.211 17.785 -6.982 1.00 10.76 C ATOM 63 CH2 TRP 7 -0.076 16.381 -7.173 1.00 10.76 C ATOM 64 C TRP 7 -2.573 18.761 -0.999 1.00 10.76 C ATOM 65 O TRP 7 -2.612 19.223 0.142 1.00 10.76 O ATOM 66 N VAL 8 -3.127 17.588 -1.337 1.00 10.33 N ATOM 68 CA VAL 8 -3.862 16.740 -0.375 1.00 10.33 C ATOM 69 CB VAL 8 -5.222 16.204 -0.969 1.00 10.33 C ATOM 70 CG1 VAL 8 -6.175 15.742 0.149 1.00 10.33 C ATOM 71 CG2 VAL 8 -5.910 17.278 -1.815 1.00 10.33 C ATOM 72 C VAL 8 -2.966 15.558 0.061 1.00 10.33 C ATOM 73 O VAL 8 -2.359 14.865 -0.768 1.00 10.33 O ATOM 74 N GLY 9 -2.867 15.408 1.385 1.00 9.92 N ATOM 76 CA GLY 9 -2.057 14.381 2.024 1.00 9.92 C ATOM 77 C GLY 9 -1.434 15.049 3.237 1.00 9.92 C ATOM 78 O GLY 9 -2.142 15.729 3.985 1.00 9.92 O ATOM 79 N SER 10 -0.120 14.867 3.417 1.00 9.33 N ATOM 81 CA SER 10 0.671 15.464 4.510 1.00 9.33 C ATOM 82 CB SER 10 2.064 14.826 4.575 1.00 9.33 C ATOM 83 OG SER 10 2.686 14.798 3.303 1.00 9.33 O ATOM 85 C SER 10 0.780 16.988 4.314 1.00 9.33 C ATOM 86 O SER 10 0.836 17.753 5.282 1.00 9.33 O ATOM 87 N SER 11 0.839 17.392 3.038 1.00 9.56 N ATOM 89 CA SER 11 0.931 18.793 2.592 1.00 9.56 C ATOM 90 OG SER 11 0.171 17.933 0.463 1.00 9.56 O ATOM 92 C SER 11 -0.278 19.647 3.014 1.00 9.56 C ATOM 93 O SER 11 -0.121 20.822 3.373 1.00 9.56 O ATOM 94 CB SER 11 1.087 18.826 1.074 1.00 9.56 C ATOM 95 N TYR 12 -1.466 19.028 2.977 1.00 9.65 N ATOM 97 CA TYR 12 -2.756 19.635 3.361 1.00 9.65 C ATOM 98 CB TYR 12 -3.911 18.685 2.970 1.00 9.65 C ATOM 99 CG TYR 12 -5.316 19.299 2.836 1.00 9.65 C ATOM 100 CD1 TYR 12 -6.201 19.349 3.941 1.00 9.65 C ATOM 101 CE1 TYR 12 -7.513 19.884 3.813 1.00 9.65 C ATOM 102 CD2 TYR 12 -5.780 19.801 1.594 1.00 9.65 C ATOM 103 CE2 TYR 12 -7.090 20.339 1.458 1.00 9.65 C ATOM 104 CZ TYR 12 -7.946 20.375 2.571 1.00 9.65 C ATOM 105 OH TYR 12 -9.215 20.893 2.446 1.00 9.65 O ATOM 107 C TYR 12 -2.744 19.872 4.880 1.00 9.65 C ATOM 108 O TYR 12 -3.296 20.866 5.369 1.00 9.65 O ATOM 109 N VAL 13 -2.094 18.940 5.593 1.00 9.35 N ATOM 111 CA VAL 13 -1.927 18.948 7.060 1.00 9.35 C ATOM 112 CB VAL 13 -1.292 17.599 7.559 1.00 9.35 C ATOM 113 CG1 VAL 13 -1.273 17.523 9.099 1.00 9.35 C ATOM 114 CG2 VAL 13 -2.075 16.406 7.019 1.00 9.35 C ATOM 115 C VAL 13 -1.024 20.147 7.436 1.00 9.35 C ATOM 116 O VAL 13 -1.282 20.834 8.434 1.00 9.35 O ATOM 117 N ALA 14 0.002 20.385 6.605 1.00 8.76 N ATOM 119 CA ALA 14 0.970 21.484 6.764 1.00 8.76 C ATOM 120 CB ALA 14 2.132 21.291 5.823 1.00 8.76 C ATOM 121 C ALA 14 0.323 22.854 6.518 1.00 8.76 C ATOM 122 O ALA 14 0.607 23.811 7.248 1.00 8.76 O ATOM 123 N GLU 15 -0.564 22.919 5.513 1.00 9.14 N ATOM 125 CA GLU 15 -1.288 24.147 5.130 1.00 9.14 C ATOM 126 CB GLU 15 -1.993 23.958 3.768 1.00 9.14 C ATOM 127 CG GLU 15 -2.442 25.268 3.070 1.00 9.14 C ATOM 128 CD GLU 15 -3.323 25.049 1.845 1.00 9.14 C ATOM 129 OE1 GLU 15 -2.995 25.611 0.780 1.00 9.14 O ATOM 130 OE2 GLU 15 -4.355 24.347 1.946 1.00 9.14 O ATOM 131 C GLU 15 -2.294 24.575 6.223 1.00 9.14 C ATOM 132 O GLU 15 -2.307 25.746 6.614 1.00 9.14 O ATOM 133 N THR 16 -3.084 23.618 6.737 1.00 9.00 N ATOM 135 CA THR 16 -4.086 23.877 7.793 1.00 9.00 C ATOM 136 CB THR 16 -5.146 22.708 7.924 1.00 9.00 C ATOM 137 OG1 THR 16 -6.123 23.044 8.919 1.00 9.00 O ATOM 139 CG2 THR 16 -4.499 21.360 8.276 1.00 9.00 C ATOM 140 C THR 16 -3.432 24.240 9.143 1.00 9.00 C ATOM 141 O THR 16 -3.918 25.127 9.854 1.00 9.00 O ATOM 142 N GLY 17 -2.300 23.585 9.439 1.00 8.27 N ATOM 144 CA GLY 17 -1.543 23.817 10.668 1.00 8.27 C ATOM 145 C GLY 17 -0.897 25.194 10.733 1.00 8.27 C ATOM 146 O GLY 17 -1.011 25.890 11.751 1.00 8.27 O ATOM 147 N GLN 18 -0.261 25.587 9.621 1.00 8.32 N ATOM 149 CA GLN 18 0.416 26.887 9.464 1.00 8.32 C ATOM 150 CB GLN 18 1.278 26.908 8.195 1.00 8.32 C ATOM 151 CG GLN 18 2.575 26.114 8.299 1.00 8.32 C ATOM 152 CD GLN 18 3.392 26.164 7.022 1.00 8.32 C ATOM 153 OE1 GLN 18 3.244 25.315 6.143 1.00 8.32 O ATOM 154 NE2 GLN 18 4.262 27.163 6.913 1.00 8.32 N ATOM 157 C GLN 18 -0.581 28.056 9.443 1.00 8.32 C ATOM 158 O GLN 18 -0.297 29.118 10.010 1.00 8.32 O ATOM 159 N ASN 19 -1.748 27.837 8.815 1.00 8.66 N ATOM 161 CA ASN 19 -2.826 28.839 8.707 1.00 8.66 C ATOM 162 CB ASN 19 -3.863 28.418 7.653 1.00 8.66 C ATOM 163 CG ASN 19 -3.462 28.818 6.237 1.00 8.66 C ATOM 164 OD1 ASN 19 -2.794 28.065 5.527 1.00 8.66 O ATOM 165 ND2 ASN 19 -3.887 30.007 5.816 1.00 8.66 N ATOM 168 C ASN 19 -3.521 29.169 10.041 1.00 8.66 C ATOM 169 O ASN 19 -3.675 30.353 10.365 1.00 8.66 O ATOM 170 N TRP 20 -3.896 28.140 10.820 1.00 8.36 N ATOM 172 CA TRP 20 -4.551 28.334 12.130 1.00 8.36 C ATOM 173 CB TRP 20 -5.303 27.060 12.624 1.00 8.36 C ATOM 174 CG TRP 20 -4.532 25.957 13.411 1.00 8.36 C ATOM 175 CD2 TRP 20 -4.233 25.929 14.826 1.00 8.36 C ATOM 176 CE2 TRP 20 -3.577 24.693 15.089 1.00 8.36 C ATOM 177 CE3 TRP 20 -4.454 26.823 15.899 1.00 8.36 C ATOM 178 CD1 TRP 20 -4.059 24.777 12.905 1.00 8.36 C ATOM 179 NE1 TRP 20 -3.488 24.020 13.900 1.00 8.36 N ATOM 181 CZ2 TRP 20 -3.135 24.322 16.383 1.00 8.36 C ATOM 182 CZ3 TRP 20 -4.013 26.456 17.195 1.00 8.36 C ATOM 183 CH2 TRP 20 -3.360 25.211 17.418 1.00 8.36 C ATOM 184 C TRP 20 -3.590 28.920 13.184 1.00 8.36 C ATOM 185 O TRP 20 -4.002 29.738 14.013 1.00 8.36 O ATOM 186 N ALA 21 -2.317 28.497 13.122 1.00 7.65 N ATOM 188 CA ALA 21 -1.239 28.950 14.024 1.00 7.65 C ATOM 189 CB ALA 21 0.001 28.084 13.838 1.00 7.65 C ATOM 190 C ALA 21 -0.894 30.433 13.794 1.00 7.65 C ATOM 191 O ALA 21 -0.674 31.175 14.759 1.00 7.65 O ATOM 192 N SER 22 -0.869 30.843 12.516 1.00 8.12 N ATOM 194 CA SER 22 -0.582 32.229 12.087 1.00 8.12 C ATOM 195 CB SER 22 -0.328 32.288 10.576 1.00 8.12 C ATOM 196 OG SER 22 0.826 31.547 10.220 1.00 8.12 O ATOM 198 C SER 22 -1.705 33.208 12.473 1.00 8.12 C ATOM 199 O SER 22 -1.425 34.293 12.995 1.00 8.12 O ATOM 200 N LEU 23 -2.965 32.793 12.256 1.00 8.31 N ATOM 202 CA LEU 23 -4.164 33.594 12.578 1.00 8.31 C ATOM 203 CB LEU 23 -5.435 32.965 11.967 1.00 8.31 C ATOM 204 CG LEU 23 -5.726 32.988 10.454 1.00 8.31 C ATOM 205 CD1 LEU 23 -6.513 31.740 10.089 1.00 8.31 C ATOM 206 CD2 LEU 23 -6.492 34.249 10.010 1.00 8.31 C ATOM 207 C LEU 23 -4.340 33.767 14.097 1.00 8.31 C ATOM 208 O LEU 23 -4.662 34.867 14.557 1.00 8.31 O ATOM 209 N ALA 24 -4.071 32.690 14.851 1.00 7.78 N ATOM 211 CA ALA 24 -4.162 32.652 16.326 1.00 7.78 C ATOM 212 CB ALA 24 -4.060 31.215 16.823 1.00 7.78 C ATOM 213 C ALA 24 -3.077 33.520 16.986 1.00 7.78 C ATOM 214 O ALA 24 -3.357 34.235 17.957 1.00 7.78 O ATOM 215 N ALA 25 -1.863 33.477 16.417 1.00 7.41 N ATOM 217 CA ALA 25 -0.689 34.241 16.883 1.00 7.41 C ATOM 218 CB ALA 25 0.570 33.759 16.170 1.00 7.41 C ATOM 219 C ALA 25 -0.880 35.751 16.664 1.00 7.41 C ATOM 220 O ALA 25 -0.488 36.556 17.517 1.00 7.41 O ATOM 221 N ASN 26 -1.479 36.109 15.517 1.00 8.03 N ATOM 223 CA ASN 26 -1.775 37.503 15.135 1.00 8.03 C ATOM 224 CB ASN 26 -2.117 37.601 13.639 1.00 8.03 C ATOM 225 CG ASN 26 -0.877 37.632 12.751 1.00 8.03 C ATOM 226 OD1 ASN 26 -0.391 36.591 12.303 1.00 8.03 O ATOM 227 ND2 ASN 26 -0.373 38.832 12.478 1.00 8.03 N ATOM 230 C ASN 26 -2.880 38.169 15.979 1.00 8.03 C ATOM 231 O ASN 26 -2.705 39.309 16.418 1.00 8.03 O ATOM 232 N GLU 27 -3.999 37.458 16.197 1.00 7.94 N ATOM 234 CA GLU 27 -5.139 37.955 16.996 1.00 7.94 C ATOM 235 CG GLU 27 -6.447 35.661 16.990 1.00 7.94 C ATOM 236 CD GLU 27 -7.768 35.003 16.640 1.00 7.94 C ATOM 237 OE1 GLU 27 -8.652 34.937 17.520 1.00 7.94 O ATOM 238 OE2 GLU 27 -7.922 34.550 15.486 1.00 7.94 O ATOM 239 C GLU 27 -4.895 38.083 18.517 1.00 7.94 C ATOM 240 O GLU 27 -5.249 39.104 19.113 1.00 7.94 O ATOM 241 CB GLU 27 -6.440 37.171 16.694 1.00 7.94 C ATOM 242 N LEU 28 -4.288 37.048 19.116 1.00 7.32 N ATOM 244 CA LEU 28 -3.971 36.980 20.559 1.00 7.32 C ATOM 245 CB LEU 28 -3.618 35.527 20.972 1.00 7.32 C ATOM 246 CG LEU 28 -4.554 34.325 21.302 1.00 7.32 C ATOM 247 CD1 LEU 28 -5.265 34.498 22.656 1.00 7.32 C ATOM 248 CD2 LEU 28 -5.559 33.979 20.189 1.00 7.32 C ATOM 249 C LEU 28 -2.889 37.948 21.077 1.00 7.32 C ATOM 250 O LEU 28 -3.014 38.466 22.193 1.00 7.32 O ATOM 251 N ARG 29 -1.850 38.184 20.264 1.00 7.25 N ATOM 253 CA ARG 29 -0.721 39.074 20.611 1.00 7.25 C ATOM 254 CB ARG 29 0.591 38.550 20.003 1.00 7.25 C ATOM 255 CG ARG 29 1.103 37.241 20.611 1.00 7.25 C ATOM 256 CD ARG 29 2.439 36.807 20.009 1.00 7.25 C ATOM 257 NE ARG 29 2.327 36.390 18.608 1.00 7.25 N ATOM 259 CZ ARG 29 3.344 36.000 17.838 1.00 7.25 C ATOM 260 NH1 ARG 29 4.587 35.961 18.309 1.00 7.25 N ATOM 263 NH2 ARG 29 3.115 35.648 16.581 1.00 7.25 N ATOM 266 C ARG 29 -0.928 40.555 20.233 1.00 7.25 C ATOM 267 O ARG 29 -0.851 41.426 21.109 1.00 7.25 O ATOM 268 N VAL 30 -1.188 40.825 18.944 1.00 8.44 N ATOM 270 CA VAL 30 -1.412 42.187 18.412 1.00 8.44 C ATOM 271 CB VAL 30 -0.437 42.538 17.212 1.00 8.44 C ATOM 272 CG1 VAL 30 0.948 42.859 17.752 1.00 8.44 C ATOM 273 CG2 VAL 30 -0.339 41.385 16.188 1.00 8.44 C ATOM 274 C VAL 30 -2.882 42.458 18.023 1.00 8.44 C ATOM 275 O VAL 30 -3.596 41.529 17.626 1.00 8.44 O ATOM 276 N THR 31 -3.315 43.721 18.159 1.00 7.53 N ATOM 278 CA THR 31 -4.685 44.172 17.837 1.00 7.53 C ATOM 279 CB THR 31 -5.228 45.209 18.917 1.00 7.53 C ATOM 280 OG1 THR 31 -6.501 45.727 18.509 1.00 7.53 O ATOM 282 CG2 THR 31 -4.243 46.374 19.162 1.00 7.53 C ATOM 283 C THR 31 -4.822 44.688 16.376 1.00 7.53 C ATOM 284 O THR 31 -4.303 45.762 16.033 1.00 7.53 O ATOM 285 N GLU 32 -5.465 43.872 15.527 1.00 7.34 N ATOM 287 CA GLU 32 -5.694 44.169 14.098 1.00 7.34 C ATOM 288 CB GLU 32 -4.807 43.283 13.200 1.00 7.34 C ATOM 289 CG GLU 32 -3.318 43.615 13.236 1.00 7.34 C ATOM 290 CD GLU 32 -2.494 42.714 12.336 1.00 7.34 C ATOM 291 OE1 GLU 32 -2.307 43.063 11.151 1.00 7.34 O ATOM 292 OE2 GLU 32 -2.031 41.657 12.813 1.00 7.34 O ATOM 293 C GLU 32 -7.167 43.974 13.703 1.00 7.34 C ATOM 294 O GLU 32 -7.636 44.590 12.735 1.00 7.34 O ATOM 295 N ARG 33 -7.887 43.143 14.471 1.00 6.09 N ATOM 297 CA ARG 33 -9.311 42.817 14.234 1.00 6.09 C ATOM 298 CB ARG 33 -9.662 41.443 14.830 1.00 6.09 C ATOM 299 CG ARG 33 -8.955 40.260 14.162 1.00 6.09 C ATOM 300 CD ARG 33 -9.327 38.924 14.801 1.00 6.09 C ATOM 301 NE ARG 33 -10.694 38.503 14.482 1.00 6.09 N ATOM 303 CZ ARG 33 -11.230 37.325 14.806 1.00 6.09 C ATOM 304 NH1 ARG 33 -12.481 37.058 14.460 1.00 6.09 N ATOM 307 NH2 ARG 33 -10.530 36.410 15.470 1.00 6.09 N ATOM 310 C ARG 33 -10.367 43.877 14.669 1.00 6.09 C ATOM 311 O ARG 33 -11.343 44.065 13.935 1.00 6.09 O ATOM 312 N PRO 34 -10.215 44.564 15.855 1.00 5.13 N ATOM 313 CD PRO 34 -11.131 45.720 15.974 1.00 5.13 C ATOM 314 CA PRO 34 -9.248 44.612 16.980 1.00 5.13 C ATOM 315 CB PRO 34 -9.645 45.901 17.721 1.00 5.13 C ATOM 316 CG PRO 34 -10.268 46.738 16.673 1.00 5.13 C ATOM 317 C PRO 34 -9.281 43.371 17.914 1.00 5.13 C ATOM 318 O PRO 34 -8.543 42.407 17.680 1.00 5.13 O ATOM 319 N PHE 35 -10.113 43.427 18.966 1.00 3.03 N ATOM 321 CA PHE 35 -10.308 42.354 19.963 1.00 3.03 C ATOM 322 CB PHE 35 -9.360 42.504 21.197 1.00 3.03 C ATOM 323 CG PHE 35 -9.208 43.936 21.738 1.00 3.03 C ATOM 324 CD1 PHE 35 -8.201 44.797 21.236 1.00 3.03 C ATOM 325 CD2 PHE 35 -10.043 44.410 22.777 1.00 3.03 C ATOM 326 CE1 PHE 35 -8.029 46.109 21.758 1.00 3.03 C ATOM 327 CE2 PHE 35 -9.884 45.720 23.309 1.00 3.03 C ATOM 328 CZ PHE 35 -8.873 46.571 22.797 1.00 3.03 C ATOM 329 C PHE 35 -11.766 42.381 20.427 1.00 3.03 C ATOM 330 O PHE 35 -12.341 43.469 20.564 1.00 3.03 O ATOM 331 N TRP 36 -12.359 41.202 20.654 1.00 2.60 N ATOM 333 CA TRP 36 -13.753 41.128 21.108 1.00 2.60 C ATOM 334 CB TRP 36 -14.657 40.416 20.076 1.00 2.60 C ATOM 335 CG TRP 36 -14.411 40.842 18.598 1.00 2.60 C ATOM 336 CD2 TRP 36 -14.696 42.122 17.981 1.00 2.60 C ATOM 337 CE2 TRP 36 -14.256 42.039 16.629 1.00 2.60 C ATOM 338 CE3 TRP 36 -15.273 43.330 18.437 1.00 2.60 C ATOM 339 CD1 TRP 36 -13.838 40.074 17.617 1.00 2.60 C ATOM 340 NE1 TRP 36 -13.742 40.784 16.444 1.00 2.60 N ATOM 342 CZ2 TRP 36 -14.372 43.120 15.721 1.00 2.60 C ATOM 343 CZ3 TRP 36 -15.390 44.415 17.531 1.00 2.60 C ATOM 344 CH2 TRP 36 -14.939 44.293 16.186 1.00 2.60 C ATOM 345 C TRP 36 -13.946 40.564 22.518 1.00 2.60 C ATOM 346 O TRP 36 -13.542 39.436 22.831 1.00 2.60 O ATOM 347 N ILE 37 -14.633 41.377 23.325 1.00 1.51 N ATOM 349 CA ILE 37 -14.982 41.154 24.738 1.00 1.51 C ATOM 350 CB ILE 37 -14.525 42.284 25.665 1.00 1.51 C ATOM 351 CG2 ILE 37 -13.589 41.692 26.734 1.00 1.51 C ATOM 352 CG1 ILE 37 -13.756 43.373 24.886 1.00 1.51 C ATOM 353 CD1 ILE 37 -13.744 44.777 25.519 1.00 1.51 C ATOM 354 C ILE 37 -16.490 40.902 24.798 1.00 1.51 C ATOM 355 O ILE 37 -17.215 41.366 23.912 1.00 1.51 O ATOM 356 N SER 38 -16.974 40.209 25.835 1.00 1.89 N ATOM 358 CA SER 38 -18.369 39.771 25.838 1.00 1.89 C ATOM 359 CB SER 38 -18.334 38.282 26.120 1.00 1.89 C ATOM 360 OG SER 38 -17.359 37.972 27.101 1.00 1.89 O ATOM 362 C SER 38 -19.633 40.339 26.494 1.00 1.89 C ATOM 363 O SER 38 -19.707 40.617 27.697 1.00 1.89 O ATOM 364 N SER 39 -20.595 40.541 25.575 1.00 2.47 N ATOM 366 CA SER 39 -21.982 41.026 25.738 1.00 2.47 C ATOM 367 CB SER 39 -22.054 42.415 25.147 1.00 2.47 C ATOM 368 OG SER 39 -21.024 43.236 25.668 1.00 2.47 O ATOM 370 C SER 39 -22.843 40.107 24.843 1.00 2.47 C ATOM 371 O SER 39 -22.357 39.739 23.788 1.00 2.47 O ATOM 372 N PHE 40 -24.036 39.644 25.239 1.00 2.77 N ATOM 374 CA PHE 40 -24.848 38.808 24.310 1.00 2.77 C ATOM 375 CB PHE 40 -24.612 37.276 24.505 1.00 2.77 C ATOM 376 CG PHE 40 -24.903 36.398 23.268 1.00 2.77 C ATOM 377 CD1 PHE 40 -26.190 35.855 23.045 1.00 2.77 C ATOM 378 CD2 PHE 40 -23.870 36.046 22.369 1.00 2.77 C ATOM 379 CE1 PHE 40 -26.443 34.976 21.953 1.00 2.77 C ATOM 380 CE2 PHE 40 -24.110 35.171 21.273 1.00 2.77 C ATOM 381 CZ PHE 40 -25.399 34.635 21.066 1.00 2.77 C ATOM 382 C PHE 40 -26.337 39.172 24.121 1.00 2.77 C ATOM 383 O PHE 40 -26.985 39.658 25.054 1.00 2.77 O ATOM 384 N ILE 41 -26.826 38.995 22.880 1.00 2.97 N ATOM 386 CA ILE 41 -28.220 39.261 22.459 1.00 2.97 C ATOM 387 CB ILE 41 -28.269 40.411 21.334 1.00 2.97 C ATOM 388 CG2 ILE 41 -27.801 39.893 19.940 1.00 2.97 C ATOM 389 CG1 ILE 41 -29.664 41.067 21.284 1.00 2.97 C ATOM 390 CD1 ILE 41 -29.656 42.584 21.053 1.00 2.97 C ATOM 391 C ILE 41 -28.834 37.927 21.958 1.00 2.97 C ATOM 392 O ILE 41 -28.202 37.232 21.154 1.00 2.97 O ATOM 393 N GLY 42 -30.028 37.553 22.432 1.00 3.92 N ATOM 395 CA GLY 42 -30.592 36.305 21.938 1.00 3.92 C ATOM 396 C GLY 42 -32.009 36.230 21.386 1.00 3.92 C ATOM 397 O GLY 42 -33.004 36.486 22.070 1.00 3.92 O ATOM 398 N ARG 43 -32.028 35.884 20.095 1.00 4.62 N ATOM 400 CA ARG 43 -33.171 35.626 19.196 1.00 4.62 C ATOM 401 CB ARG 43 -33.403 36.778 18.209 1.00 4.62 C ATOM 402 CG ARG 43 -34.131 37.979 18.807 1.00 4.62 C ATOM 403 CD ARG 43 -34.524 39.003 17.741 1.00 4.62 C ATOM 404 NE ARG 43 -35.568 38.512 16.836 1.00 4.62 N ATOM 406 CZ ARG 43 -36.020 39.161 15.762 1.00 4.62 C ATOM 407 NH1 ARG 43 -36.971 38.611 15.018 1.00 4.62 N ATOM 410 NH2 ARG 43 -35.534 40.350 15.420 1.00 4.62 N ATOM 413 C ARG 43 -32.629 34.395 18.458 1.00 4.62 C ATOM 414 O ARG 43 -31.397 34.278 18.371 1.00 4.62 O ATOM 415 N SER 44 -33.454 33.484 17.916 1.00 5.09 N ATOM 417 CA SER 44 -32.810 32.346 17.239 1.00 5.09 C ATOM 418 CB SER 44 -33.573 31.042 17.525 1.00 5.09 C ATOM 419 OG SER 44 -33.604 30.764 18.914 1.00 5.09 O ATOM 421 C SER 44 -32.755 32.626 15.722 1.00 5.09 C ATOM 422 O SER 44 -33.759 32.691 14.999 1.00 5.09 O ATOM 423 N LYS 45 -31.495 32.868 15.340 1.00 4.94 N ATOM 425 CA LYS 45 -30.934 33.198 14.020 1.00 4.94 C ATOM 426 CG LYS 45 -30.695 35.278 12.483 1.00 4.94 C ATOM 427 CD LYS 45 -30.380 36.765 12.470 1.00 4.94 C ATOM 428 CE LYS 45 -30.429 37.326 11.058 1.00 4.94 C ATOM 429 NZ LYS 45 -30.122 38.782 11.029 1.00 4.94 N ATOM 433 C LYS 45 -29.621 32.396 13.990 1.00 4.94 C ATOM 434 O LYS 45 -29.130 32.016 15.062 1.00 4.94 O ATOM 435 CB LYS 45 -30.646 34.709 13.907 1.00 4.94 C TER 2232 LEU 249 END