####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS458_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 2 - 20 4.61 23.23 LONGEST_CONTINUOUS_SEGMENT: 19 3 - 21 4.80 22.99 LONGEST_CONTINUOUS_SEGMENT: 19 16 - 34 4.53 19.16 LONGEST_CONTINUOUS_SEGMENT: 19 17 - 35 4.70 19.35 LCS_AVERAGE: 41.12 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.57 21.08 LCS_AVERAGE: 22.16 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.77 21.70 LCS_AVERAGE: 14.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 19 3 3 3 5 5 6 8 10 12 12 13 15 16 19 20 22 22 24 24 24 LCS_GDT V 3 V 3 3 4 19 3 3 3 5 5 6 11 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT Q 4 Q 4 5 7 19 3 4 5 5 6 9 9 11 14 14 16 17 18 19 20 22 23 24 25 25 LCS_GDT G 5 G 5 5 7 19 0 4 5 6 8 12 13 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT P 6 P 6 5 7 19 0 4 5 6 9 12 13 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT W 7 W 7 5 11 19 3 4 5 7 10 12 13 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT V 8 V 8 5 11 19 3 4 5 5 9 11 13 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT G 9 G 9 9 11 19 3 3 7 9 10 12 13 13 14 15 15 17 18 19 20 22 23 24 25 25 LCS_GDT S 10 S 10 9 11 19 4 7 8 9 10 12 13 13 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT S 11 S 11 9 11 19 5 7 8 9 10 12 13 13 14 15 16 17 18 19 21 22 24 24 25 25 LCS_GDT Y 12 Y 12 9 11 19 5 7 8 9 10 12 13 13 14 15 16 17 18 19 20 22 23 24 25 25 LCS_GDT V 13 V 13 9 11 19 5 7 8 9 10 12 13 13 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT A 14 A 14 9 11 19 5 7 8 9 10 12 13 13 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT E 15 E 15 9 11 19 5 7 8 9 10 12 13 13 14 15 16 17 18 19 20 22 24 24 25 25 LCS_GDT T 16 T 16 9 11 19 4 7 8 9 10 12 13 13 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT G 17 G 17 9 11 19 4 5 8 9 10 12 13 13 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT Q 18 Q 18 4 4 19 3 3 4 4 6 6 10 11 14 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT N 19 N 19 4 11 19 3 4 5 8 9 11 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT W 20 W 20 10 13 19 7 9 10 11 12 13 13 14 15 15 16 17 18 19 21 22 24 24 25 25 LCS_GDT A 21 A 21 10 13 19 7 9 10 11 12 13 13 14 15 15 15 16 18 20 21 22 24 24 25 25 LCS_GDT S 22 S 22 10 13 19 7 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT L 23 L 23 10 13 19 7 9 10 11 12 13 13 14 15 15 16 17 18 20 21 22 24 24 25 25 LCS_GDT A 24 A 24 10 13 19 7 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT A 25 A 25 10 13 19 7 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT N 26 N 26 10 13 19 7 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT E 27 E 27 10 13 19 5 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT L 28 L 28 10 13 19 5 9 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT R 29 R 29 10 13 19 3 7 10 10 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT V 30 V 30 4 13 19 3 3 4 4 11 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT T 31 T 31 4 13 19 3 5 10 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT E 32 E 32 3 13 19 3 5 8 11 12 13 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT R 33 R 33 4 9 19 3 3 5 7 8 10 13 14 15 15 16 16 18 20 21 22 24 24 25 25 LCS_GDT P 34 P 34 4 8 19 3 3 5 7 7 7 8 10 11 12 15 15 17 19 20 22 24 24 25 25 LCS_GDT F 35 F 35 4 8 19 3 3 5 7 7 7 8 10 11 12 12 13 14 14 17 19 20 22 23 24 LCS_GDT W 36 W 36 4 8 15 3 3 5 7 7 7 8 10 11 12 12 13 14 14 14 15 16 18 19 20 LCS_GDT I 37 I 37 4 8 15 3 3 5 7 7 7 8 10 11 12 12 13 14 14 14 15 16 17 18 18 LCS_GDT S 38 S 38 4 8 15 3 3 5 7 7 7 8 10 11 12 12 13 14 14 14 15 16 17 18 18 LCS_GDT S 39 S 39 3 8 15 3 3 3 6 7 7 8 8 9 11 12 13 14 14 14 15 16 17 19 20 LCS_GDT F 40 F 40 3 8 15 3 3 3 7 7 7 8 10 11 12 12 13 14 14 14 15 16 17 18 18 LCS_GDT I 41 I 41 3 6 15 3 3 4 5 5 6 8 10 11 12 12 13 14 14 14 15 16 18 19 20 LCS_GDT G 42 G 42 3 6 15 3 3 4 5 5 6 8 10 11 12 12 13 14 14 14 15 16 18 19 20 LCS_GDT R 43 R 43 3 6 15 3 3 4 5 5 6 8 10 10 12 12 13 14 14 14 15 16 18 19 20 LCS_GDT S 44 S 44 3 6 15 3 3 4 5 5 6 8 8 9 11 12 13 14 14 14 14 15 16 17 17 LCS_GDT K 45 K 45 3 6 15 3 3 4 5 5 6 8 8 9 9 9 10 12 13 13 14 14 15 15 15 LCS_AVERAGE LCS_A: 25.84 ( 14.26 22.16 41.12 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 11 12 13 13 14 15 15 16 17 18 20 21 22 24 24 25 25 GDT PERCENT_AT 15.91 20.45 22.73 25.00 27.27 29.55 29.55 31.82 34.09 34.09 36.36 38.64 40.91 45.45 47.73 50.00 54.55 54.55 56.82 56.82 GDT RMS_LOCAL 0.28 0.55 0.77 1.18 1.36 1.57 1.57 2.11 2.48 2.48 3.85 3.94 4.22 4.87 5.04 5.23 5.81 5.81 6.08 6.08 GDT RMS_ALL_AT 21.45 21.60 21.70 21.19 21.07 21.08 21.08 20.50 20.27 20.27 23.40 23.97 22.84 18.16 18.12 18.15 17.55 17.55 17.44 17.44 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 32.019 0 0.111 0.143 33.685 0.000 0.000 - LGA V 3 V 3 27.097 0 0.205 0.889 29.074 0.000 0.000 25.633 LGA Q 4 Q 4 26.540 0 0.667 0.805 26.806 0.000 0.000 24.567 LGA G 5 G 5 28.999 0 0.390 0.390 31.470 0.000 0.000 - LGA P 6 P 6 31.080 0 0.091 0.459 32.005 0.000 0.000 32.005 LGA W 7 W 7 25.867 0 0.461 1.160 29.089 0.000 0.000 27.696 LGA V 8 V 8 23.990 0 0.621 0.737 27.858 0.000 0.000 24.934 LGA G 9 G 9 17.810 0 0.387 0.387 19.590 0.000 0.000 - LGA S 10 S 10 15.922 0 0.132 0.623 17.245 0.000 0.000 16.203 LGA S 11 S 11 20.630 0 0.089 0.079 24.563 0.000 0.000 24.563 LGA Y 12 Y 12 18.372 0 0.040 1.344 18.989 0.000 0.000 15.481 LGA V 13 V 13 13.139 0 0.047 0.173 14.877 0.000 0.000 11.093 LGA A 14 A 14 16.945 0 0.014 0.018 19.018 0.000 0.000 - LGA E 15 E 15 18.678 0 0.038 1.202 25.944 0.000 0.000 25.771 LGA T 16 T 16 13.635 0 0.130 0.929 15.178 0.000 0.000 13.385 LGA G 17 G 17 11.442 0 0.239 0.239 12.049 0.000 0.000 - LGA Q 18 Q 18 9.186 0 0.626 1.343 15.896 0.000 0.000 13.864 LGA N 19 N 19 4.726 0 0.052 0.305 9.372 8.636 4.545 7.826 LGA W 20 W 20 2.518 0 0.623 1.158 13.567 46.364 13.377 13.567 LGA A 21 A 21 1.778 0 0.036 0.035 2.097 51.364 48.727 - LGA S 22 S 22 1.748 0 0.036 0.634 2.280 58.182 51.515 2.280 LGA L 23 L 23 1.229 0 0.039 0.339 2.954 73.636 54.773 2.500 LGA A 24 A 24 0.931 0 0.017 0.020 1.172 77.727 75.273 - LGA A 25 A 25 1.056 0 0.042 0.041 1.691 69.545 65.818 - LGA N 26 N 26 1.483 0 0.033 0.799 2.841 61.818 51.818 2.841 LGA E 27 E 27 1.470 0 0.102 0.813 2.722 58.636 51.919 2.722 LGA L 28 L 28 0.310 0 0.268 0.403 1.724 86.818 76.364 1.724 LGA R 29 R 29 2.649 0 0.325 1.378 12.134 65.000 23.802 12.134 LGA V 30 V 30 3.021 0 0.106 0.985 7.863 33.182 18.961 7.599 LGA T 31 T 31 1.141 0 0.638 0.511 3.384 50.000 47.273 2.020 LGA E 32 E 32 1.348 0 0.678 1.101 6.651 35.455 24.242 6.651 LGA R 33 R 33 6.116 0 0.069 1.438 12.073 2.727 0.992 11.192 LGA P 34 P 34 12.207 0 0.102 0.388 13.697 0.000 0.000 12.327 LGA F 35 F 35 15.926 0 0.152 1.427 19.922 0.000 0.000 15.384 LGA W 36 W 36 22.758 0 0.069 1.018 24.118 0.000 0.000 21.750 LGA I 37 I 37 27.716 0 0.576 1.578 30.385 0.000 0.000 29.226 LGA S 38 S 38 32.411 0 0.796 0.919 33.651 0.000 0.000 33.651 LGA S 39 S 39 28.345 0 0.555 0.475 29.912 0.000 0.000 26.722 LGA F 40 F 40 30.043 0 0.683 1.420 32.633 0.000 0.000 31.022 LGA I 41 I 41 31.091 0 0.106 0.243 32.513 0.000 0.000 32.056 LGA G 42 G 42 33.290 0 0.596 0.596 33.290 0.000 0.000 - LGA R 43 R 43 32.596 0 0.176 1.362 34.940 0.000 0.000 31.634 LGA S 44 S 44 35.967 0 0.238 0.707 38.563 0.000 0.000 38.563 LGA K 45 K 45 38.122 0 0.190 0.815 38.771 0.000 0.000 38.206 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 14.126 14.014 14.891 17.707 13.850 5.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.11 31.818 29.324 0.635 LGA_LOCAL RMSD: 2.106 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.498 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 14.126 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.374781 * X + -0.662205 * Y + -0.648863 * Z + -3.805165 Y_new = 0.770229 * X + 0.611944 * Y + -0.179645 * Z + 62.001106 Z_new = 0.516029 * X + -0.432446 * Y + 0.739395 * Z + 42.584087 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.117939 -0.542209 -0.529216 [DEG: 64.0532 -31.0663 -30.3218 ] ZXZ: -1.300701 0.738626 2.268297 [DEG: -74.5247 42.3201 129.9639 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS458_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.11 29.324 14.13 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS458_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 -11.202 23.911 -6.066 1.00 10.58 N ATOM 14 CA ALA 2 -10.952 22.454 -5.900 1.00 10.58 C ATOM 15 CB ALA 2 -10.297 21.838 -7.151 1.00 10.58 C ATOM 16 C ALA 2 -10.092 22.178 -4.662 1.00 10.58 C ATOM 17 O ALA 2 -9.043 22.801 -4.496 1.00 10.58 O ATOM 18 N VAL 3 -10.532 21.253 -3.801 1.00 10.46 N ATOM 20 CA VAL 3 -9.812 20.891 -2.560 1.00 10.46 C ATOM 21 CB VAL 3 -10.742 20.099 -1.556 1.00 10.46 C ATOM 22 CG1 VAL 3 -11.651 21.067 -0.818 1.00 10.46 C ATOM 23 CG2 VAL 3 -11.589 19.040 -2.261 1.00 10.46 C ATOM 24 C VAL 3 -8.437 20.202 -2.799 1.00 10.46 C ATOM 25 O VAL 3 -7.960 20.194 -3.936 1.00 10.46 O ATOM 26 N GLN 4 -7.791 19.692 -1.738 1.00 10.83 N ATOM 28 CA GLN 4 -6.488 19.002 -1.816 1.00 10.83 C ATOM 29 CB GLN 4 -5.509 19.572 -0.766 1.00 10.83 C ATOM 30 CG GLN 4 -4.016 19.251 -0.996 1.00 10.83 C ATOM 31 CD GLN 4 -3.132 19.663 0.171 1.00 10.83 C ATOM 32 OE1 GLN 4 -3.099 18.998 1.208 1.00 10.83 O ATOM 33 NE2 GLN 4 -2.395 20.756 -0.001 1.00 10.83 N ATOM 36 C GLN 4 -6.754 17.505 -1.566 1.00 10.83 C ATOM 37 O GLN 4 -5.916 16.653 -1.889 1.00 10.83 O ATOM 38 N GLY 5 -7.939 17.215 -1.019 1.00 10.98 N ATOM 40 CA GLY 5 -8.356 15.852 -0.722 1.00 10.98 C ATOM 41 C GLY 5 -9.188 15.229 -1.845 1.00 10.98 C ATOM 42 O GLY 5 -8.582 14.655 -2.757 1.00 10.98 O ATOM 43 N PRO 6 -10.555 15.303 -1.819 1.00 11.76 N ATOM 44 CD PRO 6 -11.358 15.776 -0.667 1.00 11.76 C ATOM 45 CA PRO 6 -11.464 14.749 -2.846 1.00 11.76 C ATOM 46 CB PRO 6 -12.830 15.220 -2.358 1.00 11.76 C ATOM 47 CG PRO 6 -12.695 15.113 -0.896 1.00 11.76 C ATOM 48 C PRO 6 -11.184 15.262 -4.279 1.00 11.76 C ATOM 49 O PRO 6 -11.412 14.548 -5.263 1.00 11.76 O ATOM 50 N TRP 7 -10.691 16.503 -4.345 1.00 11.22 N ATOM 52 CA TRP 7 -10.313 17.240 -5.566 1.00 11.22 C ATOM 53 CB TRP 7 -11.181 18.505 -5.773 1.00 11.22 C ATOM 54 CG TRP 7 -12.566 18.279 -6.430 1.00 11.22 C ATOM 55 CD2 TRP 7 -13.830 18.041 -5.769 1.00 11.22 C ATOM 56 CE2 TRP 7 -14.821 17.938 -6.787 1.00 11.22 C ATOM 57 CE3 TRP 7 -14.225 17.904 -4.418 1.00 11.22 C ATOM 58 CD1 TRP 7 -12.849 18.308 -7.778 1.00 11.22 C ATOM 59 NE1 TRP 7 -14.191 18.104 -7.991 1.00 11.22 N ATOM 61 CZ2 TRP 7 -16.188 17.704 -6.500 1.00 11.22 C ATOM 62 CZ3 TRP 7 -15.593 17.670 -4.128 1.00 11.22 C ATOM 63 CH2 TRP 7 -16.554 17.573 -5.172 1.00 11.22 C ATOM 64 C TRP 7 -8.848 17.644 -5.391 1.00 11.22 C ATOM 65 O TRP 7 -8.371 17.700 -4.256 1.00 11.22 O ATOM 66 N VAL 8 -8.108 17.779 -6.500 1.00 11.80 N ATOM 68 CA VAL 8 -6.685 18.178 -6.467 1.00 11.80 C ATOM 69 CB VAL 8 -5.777 17.248 -7.376 1.00 11.80 C ATOM 70 CG1 VAL 8 -4.288 17.417 -7.028 1.00 11.80 C ATOM 71 CG2 VAL 8 -6.177 15.780 -7.225 1.00 11.80 C ATOM 72 C VAL 8 -6.636 19.652 -6.938 1.00 11.80 C ATOM 73 O VAL 8 -6.850 19.957 -8.121 1.00 11.80 O ATOM 74 N GLY 9 -6.433 20.550 -5.967 1.00 11.20 N ATOM 76 CA GLY 9 -6.376 21.979 -6.237 1.00 11.20 C ATOM 77 C GLY 9 -6.249 22.890 -5.023 1.00 11.20 C ATOM 78 O GLY 9 -5.746 22.480 -3.973 1.00 11.20 O ATOM 79 N SER 10 -6.743 24.121 -5.199 1.00 10.68 N ATOM 81 CA SER 10 -6.731 25.232 -4.233 1.00 10.68 C ATOM 82 CB SER 10 -6.885 26.549 -4.999 1.00 10.68 C ATOM 83 OG SER 10 -5.828 26.728 -5.923 1.00 10.68 O ATOM 85 C SER 10 -7.572 25.329 -2.939 1.00 10.68 C ATOM 86 O SER 10 -7.040 25.802 -1.932 1.00 10.68 O ATOM 87 N SER 11 -8.828 24.850 -2.934 1.00 10.21 N ATOM 89 CA SER 11 -9.758 24.989 -1.778 1.00 10.21 C ATOM 90 OG SER 11 -12.143 24.854 -1.216 1.00 10.21 O ATOM 92 C SER 11 -9.385 24.471 -0.368 1.00 10.21 C ATOM 93 O SER 11 -9.550 25.222 0.603 1.00 10.21 O ATOM 94 CB SER 11 -11.155 24.478 -2.164 1.00 10.21 C ATOM 95 N TYR 12 -8.905 23.225 -0.238 1.00 10.94 N ATOM 97 CA TYR 12 -8.492 22.668 1.071 1.00 10.94 C ATOM 98 CB TYR 12 -8.313 21.137 1.005 1.00 10.94 C ATOM 99 CG TYR 12 -8.381 20.359 2.331 1.00 10.94 C ATOM 100 CD1 TYR 12 -9.609 19.839 2.812 1.00 10.94 C ATOM 101 CE1 TYR 12 -9.671 19.090 4.020 1.00 10.94 C ATOM 102 CD2 TYR 12 -7.214 20.108 3.094 1.00 10.94 C ATOM 103 CE2 TYR 12 -7.267 19.360 4.303 1.00 10.94 C ATOM 104 CZ TYR 12 -8.498 18.857 4.755 1.00 10.94 C ATOM 105 OH TYR 12 -8.551 18.133 5.924 1.00 10.94 O ATOM 107 C TYR 12 -7.187 23.353 1.503 1.00 10.94 C ATOM 108 O TYR 12 -6.985 23.629 2.690 1.00 10.94 O ATOM 109 N VAL 13 -6.333 23.627 0.505 1.00 10.54 N ATOM 111 CA VAL 13 -5.022 24.301 0.647 1.00 10.54 C ATOM 112 CB VAL 13 -4.249 24.321 -0.732 1.00 10.54 C ATOM 113 CG1 VAL 13 -2.800 24.816 -0.553 1.00 10.54 C ATOM 114 CG2 VAL 13 -4.223 22.942 -1.357 1.00 10.54 C ATOM 115 C VAL 13 -5.316 25.741 1.141 1.00 10.54 C ATOM 116 O VAL 13 -4.571 26.297 1.960 1.00 10.54 O ATOM 117 N ALA 14 -6.437 26.285 0.645 1.00 9.54 N ATOM 119 CA ALA 14 -6.970 27.624 0.951 1.00 9.54 C ATOM 120 CB ALA 14 -8.122 27.931 -0.000 1.00 9.54 C ATOM 121 C ALA 14 -7.454 27.706 2.409 1.00 9.54 C ATOM 122 O ALA 14 -7.202 28.704 3.097 1.00 9.54 O ATOM 123 N GLU 15 -8.120 26.632 2.862 1.00 9.63 N ATOM 125 CA GLU 15 -8.660 26.496 4.231 1.00 9.63 C ATOM 126 CB GLU 15 -9.598 25.282 4.330 1.00 9.63 C ATOM 127 CG GLU 15 -10.910 25.425 3.563 1.00 9.63 C ATOM 128 CD GLU 15 -11.800 24.202 3.692 1.00 9.63 C ATOM 129 OE1 GLU 15 -11.679 23.284 2.853 1.00 9.63 O ATOM 130 OE2 GLU 15 -12.623 24.160 4.631 1.00 9.63 O ATOM 131 C GLU 15 -7.543 26.385 5.284 1.00 9.63 C ATOM 132 O GLU 15 -7.613 27.043 6.329 1.00 9.63 O ATOM 133 N THR 16 -6.507 25.587 4.977 1.00 10.56 N ATOM 135 CA THR 16 -5.336 25.370 5.854 1.00 10.56 C ATOM 136 CB THR 16 -4.447 24.180 5.353 1.00 10.56 C ATOM 137 OG1 THR 16 -5.273 23.206 4.706 1.00 10.56 O ATOM 139 CG2 THR 16 -3.730 23.491 6.527 1.00 10.56 C ATOM 140 C THR 16 -4.502 26.665 5.946 1.00 10.56 C ATOM 141 O THR 16 -3.997 27.007 7.021 1.00 10.56 O ATOM 142 N GLY 17 -4.411 27.390 4.821 1.00 9.34 N ATOM 144 CA GLY 17 -3.673 28.649 4.740 1.00 9.34 C ATOM 145 C GLY 17 -4.304 29.782 5.537 1.00 9.34 C ATOM 146 O GLY 17 -3.593 30.530 6.221 1.00 9.34 O ATOM 147 N GLN 18 -5.639 29.883 5.457 1.00 8.71 N ATOM 149 CA GLN 18 -6.443 30.898 6.166 1.00 8.71 C ATOM 150 CB GLN 18 -7.882 30.927 5.634 1.00 8.71 C ATOM 151 CG GLN 18 -8.038 31.577 4.263 1.00 8.71 C ATOM 152 CD GLN 18 -9.476 31.581 3.780 1.00 8.71 C ATOM 153 OE1 GLN 18 -9.918 30.652 3.103 1.00 8.71 O ATOM 154 NE2 GLN 18 -10.214 32.630 4.126 1.00 8.71 N ATOM 157 C GLN 18 -6.447 30.682 7.690 1.00 8.71 C ATOM 158 O GLN 18 -6.325 31.649 8.450 1.00 8.71 O ATOM 159 N ASN 19 -6.570 29.414 8.114 1.00 9.39 N ATOM 161 CA ASN 19 -6.573 29.010 9.535 1.00 9.39 C ATOM 162 CB ASN 19 -7.043 27.556 9.691 1.00 9.39 C ATOM 163 CG ASN 19 -8.557 27.409 9.579 1.00 9.39 C ATOM 164 OD1 ASN 19 -9.096 27.195 8.492 1.00 9.39 O ATOM 165 ND2 ASN 19 -9.247 27.507 10.712 1.00 9.39 N ATOM 168 C ASN 19 -5.202 29.204 10.210 1.00 9.39 C ATOM 169 O ASN 19 -5.137 29.691 11.344 1.00 9.39 O ATOM 170 N TRP 20 -4.125 28.854 9.488 1.00 9.85 N ATOM 172 CA TRP 20 -2.727 28.980 9.955 1.00 9.85 C ATOM 173 CB TRP 20 -1.771 28.230 8.995 1.00 9.85 C ATOM 174 CG TRP 20 -0.389 27.805 9.568 1.00 9.85 C ATOM 175 CD2 TRP 20 0.828 28.586 9.608 1.00 9.85 C ATOM 176 CE2 TRP 20 1.833 27.762 10.190 1.00 9.85 C ATOM 177 CE3 TRP 20 1.168 29.899 9.210 1.00 9.85 C ATOM 178 CD1 TRP 20 -0.067 26.582 10.113 1.00 9.85 C ATOM 179 NE1 TRP 20 1.256 26.556 10.484 1.00 9.85 N ATOM 181 CZ2 TRP 20 3.164 28.207 10.386 1.00 9.85 C ATOM 182 CZ3 TRP 20 2.499 30.347 9.404 1.00 9.85 C ATOM 183 CH2 TRP 20 3.476 29.494 9.990 1.00 9.85 C ATOM 184 C TRP 20 -2.323 30.467 10.072 1.00 9.85 C ATOM 185 O TRP 20 -1.629 30.849 11.024 1.00 9.85 O ATOM 186 N ALA 21 -2.783 31.281 9.109 1.00 8.39 N ATOM 188 CA ALA 21 -2.529 32.735 9.044 1.00 8.39 C ATOM 189 CB ALA 21 -2.958 33.284 7.689 1.00 8.39 C ATOM 190 C ALA 21 -3.248 33.489 10.176 1.00 8.39 C ATOM 191 O ALA 21 -2.684 34.425 10.756 1.00 8.39 O ATOM 192 N SER 22 -4.482 33.055 10.479 1.00 8.32 N ATOM 194 CA SER 22 -5.336 33.626 11.541 1.00 8.32 C ATOM 195 CB SER 22 -6.770 33.098 11.419 1.00 8.32 C ATOM 196 OG SER 22 -7.348 33.466 10.178 1.00 8.32 O ATOM 198 C SER 22 -4.783 33.341 12.951 1.00 8.32 C ATOM 199 O SER 22 -4.714 34.253 13.784 1.00 8.32 O ATOM 200 N LEU 23 -4.355 32.090 13.184 1.00 9.34 N ATOM 202 CA LEU 23 -3.781 31.637 14.468 1.00 9.34 C ATOM 203 CB LEU 23 -3.641 30.101 14.507 1.00 9.34 C ATOM 204 CG LEU 23 -4.859 29.163 14.629 1.00 9.34 C ATOM 205 CD1 LEU 23 -4.559 27.874 13.881 1.00 9.34 C ATOM 206 CD2 LEU 23 -5.232 28.855 16.091 1.00 9.34 C ATOM 207 C LEU 23 -2.419 32.296 14.741 1.00 9.34 C ATOM 208 O LEU 23 -2.151 32.712 15.874 1.00 9.34 O ATOM 209 N ALA 24 -1.604 32.432 13.683 1.00 9.03 N ATOM 211 CA ALA 24 -0.264 33.052 13.728 1.00 9.03 C ATOM 212 CB ALA 24 0.479 32.795 12.422 1.00 9.03 C ATOM 213 C ALA 24 -0.348 34.563 14.005 1.00 9.03 C ATOM 214 O ALA 24 0.439 35.097 14.797 1.00 9.03 O ATOM 215 N ALA 25 -1.339 35.218 13.379 1.00 7.72 N ATOM 217 CA ALA 25 -1.608 36.664 13.513 1.00 7.72 C ATOM 218 CB ALA 25 -2.630 37.108 12.473 1.00 7.72 C ATOM 219 C ALA 25 -2.101 37.016 14.925 1.00 7.72 C ATOM 220 O ALA 25 -1.719 38.055 15.474 1.00 7.72 O ATOM 221 N ASN 26 -2.946 36.142 15.494 1.00 8.21 N ATOM 223 CA ASN 26 -3.505 36.295 16.852 1.00 8.21 C ATOM 224 CB ASN 26 -4.690 35.338 17.068 1.00 8.21 C ATOM 225 CG ASN 26 -5.994 35.871 16.485 1.00 8.21 C ATOM 226 OD1 ASN 26 -6.332 35.601 15.332 1.00 8.21 O ATOM 227 ND2 ASN 26 -6.742 36.619 17.292 1.00 8.21 N ATOM 230 C ASN 26 -2.464 36.120 17.974 1.00 8.21 C ATOM 231 O ASN 26 -2.447 36.914 18.918 1.00 8.21 O ATOM 232 N GLU 27 -1.628 35.075 17.874 1.00 9.11 N ATOM 234 CA GLU 27 -0.568 34.777 18.859 1.00 9.11 C ATOM 235 CG GLU 27 0.527 32.812 17.478 1.00 9.11 C ATOM 236 CD GLU 27 0.924 31.349 17.529 1.00 9.11 C ATOM 237 OE1 GLU 27 2.070 31.056 17.931 1.00 9.11 O ATOM 238 OE2 GLU 27 0.092 30.492 17.165 1.00 9.11 O ATOM 239 C GLU 27 0.651 35.731 18.895 1.00 9.11 C ATOM 240 O GLU 27 1.073 36.147 19.977 1.00 9.11 O ATOM 241 CB GLU 27 -0.118 33.298 18.788 1.00 9.11 C ATOM 242 N LEU 28 1.186 36.068 17.711 1.00 8.50 N ATOM 244 CA LEU 28 2.371 36.942 17.550 1.00 8.50 C ATOM 245 CB LEU 28 2.963 36.796 16.130 1.00 8.50 C ATOM 246 CG LEU 28 3.683 35.519 15.649 1.00 8.50 C ATOM 247 CD1 LEU 28 3.514 35.400 14.144 1.00 8.50 C ATOM 248 CD2 LEU 28 5.180 35.495 16.018 1.00 8.50 C ATOM 249 C LEU 28 2.258 38.438 17.907 1.00 8.50 C ATOM 250 O LEU 28 3.141 38.963 18.596 1.00 8.50 O ATOM 251 N ARG 29 1.188 39.107 17.451 1.00 7.83 N ATOM 253 CA ARG 29 0.968 40.547 17.707 1.00 7.83 C ATOM 254 CB ARG 29 0.853 41.347 16.382 1.00 7.83 C ATOM 255 CG ARG 29 -0.088 40.791 15.298 1.00 7.83 C ATOM 256 CD ARG 29 -0.094 41.678 14.063 1.00 7.83 C ATOM 257 NE ARG 29 -0.984 41.166 13.020 1.00 7.83 N ATOM 259 CZ ARG 29 -1.186 41.737 11.832 1.00 7.83 C ATOM 260 NH1 ARG 29 -0.567 42.865 11.496 1.00 7.83 N ATOM 263 NH2 ARG 29 -2.020 41.174 10.969 1.00 7.83 N ATOM 266 C ARG 29 -0.186 40.895 18.667 1.00 7.83 C ATOM 267 O ARG 29 -0.099 41.889 19.397 1.00 7.83 O ATOM 268 N VAL 30 -1.235 40.052 18.677 1.00 6.74 N ATOM 270 CA VAL 30 -2.476 40.167 19.502 1.00 6.74 C ATOM 271 CB VAL 30 -2.294 39.546 20.982 1.00 6.74 C ATOM 272 CG1 VAL 30 -1.440 40.443 21.899 1.00 6.74 C ATOM 273 CG2 VAL 30 -3.648 39.194 21.620 1.00 6.74 C ATOM 274 C VAL 30 -3.201 41.546 19.486 1.00 6.74 C ATOM 275 O VAL 30 -2.583 42.583 19.757 1.00 6.74 O ATOM 276 N THR 31 -4.513 41.513 19.184 1.00 5.89 N ATOM 278 CA THR 31 -5.446 42.673 19.093 1.00 5.89 C ATOM 279 CB THR 31 -5.954 43.169 20.498 1.00 5.89 C ATOM 280 OG1 THR 31 -4.833 43.461 21.343 1.00 5.89 O ATOM 282 CG2 THR 31 -6.833 42.113 21.161 1.00 5.89 C ATOM 283 C THR 31 -5.009 43.886 18.238 1.00 5.89 C ATOM 284 O THR 31 -3.872 44.366 18.358 1.00 5.89 O ATOM 285 N GLU 32 -5.918 44.344 17.367 1.00 5.33 N ATOM 287 CA GLU 32 -5.699 45.487 16.460 1.00 5.33 C ATOM 288 CB GLU 32 -5.897 45.068 14.974 1.00 5.33 C ATOM 289 CG GLU 32 -7.164 44.234 14.607 1.00 5.33 C ATOM 290 CD GLU 32 -6.921 42.728 14.600 1.00 5.33 C ATOM 291 OE1 GLU 32 -6.509 42.195 13.548 1.00 5.33 O ATOM 292 OE2 GLU 32 -7.144 42.083 15.647 1.00 5.33 O ATOM 293 C GLU 32 -6.566 46.714 16.817 1.00 5.33 C ATOM 294 O GLU 32 -6.248 47.841 16.415 1.00 5.33 O ATOM 295 N ARG 33 -7.633 46.475 17.593 1.00 5.83 N ATOM 297 CA ARG 33 -8.588 47.511 18.036 1.00 5.83 C ATOM 298 CB ARG 33 -10.018 46.951 18.050 1.00 5.83 C ATOM 299 CG ARG 33 -10.604 46.652 16.668 1.00 5.83 C ATOM 300 CD ARG 33 -12.026 46.098 16.749 1.00 5.83 C ATOM 301 NE ARG 33 -13.003 47.097 17.192 1.00 5.83 N ATOM 303 CZ ARG 33 -14.309 46.878 17.349 1.00 5.83 C ATOM 304 NH1 ARG 33 -15.094 47.867 17.757 1.00 5.83 N ATOM 307 NH2 ARG 33 -14.842 45.684 17.103 1.00 5.83 N ATOM 310 C ARG 33 -8.245 48.108 19.425 1.00 5.83 C ATOM 311 O ARG 33 -7.766 47.370 20.296 1.00 5.83 O ATOM 312 N PRO 34 -8.470 49.444 19.647 1.00 5.03 N ATOM 313 CD PRO 34 -8.843 50.470 18.643 1.00 5.03 C ATOM 314 CA PRO 34 -8.176 50.103 20.943 1.00 5.03 C ATOM 315 CB PRO 34 -8.446 51.585 20.646 1.00 5.03 C ATOM 316 CG PRO 34 -9.415 51.566 19.486 1.00 5.03 C ATOM 317 C PRO 34 -8.985 49.622 22.171 1.00 5.03 C ATOM 318 O PRO 34 -10.175 49.308 22.039 1.00 5.03 O ATOM 319 N PHE 35 -8.325 49.549 23.338 1.00 3.65 N ATOM 321 CA PHE 35 -8.974 49.124 24.591 1.00 3.65 C ATOM 322 CB PHE 35 -8.681 47.622 24.909 1.00 3.65 C ATOM 323 CG PHE 35 -7.272 47.137 24.531 1.00 3.65 C ATOM 324 CD1 PHE 35 -6.197 47.236 25.445 1.00 3.65 C ATOM 325 CD2 PHE 35 -7.027 46.551 23.265 1.00 3.65 C ATOM 326 CE1 PHE 35 -4.899 46.759 25.110 1.00 3.65 C ATOM 327 CE2 PHE 35 -5.736 46.070 22.916 1.00 3.65 C ATOM 328 CZ PHE 35 -4.669 46.176 23.841 1.00 3.65 C ATOM 329 C PHE 35 -8.676 49.966 25.839 1.00 3.65 C ATOM 330 O PHE 35 -7.512 50.180 26.204 1.00 3.65 O ATOM 331 N TRP 36 -9.756 50.492 26.428 1.00 3.22 N ATOM 333 CA TRP 36 -9.774 51.267 27.683 1.00 3.22 C ATOM 334 CB TRP 36 -9.939 52.777 27.431 1.00 3.22 C ATOM 335 CG TRP 36 -10.779 53.217 26.194 1.00 3.22 C ATOM 336 CD2 TRP 36 -10.281 53.673 24.917 1.00 3.22 C ATOM 337 CE2 TRP 36 -11.415 53.999 24.119 1.00 3.22 C ATOM 338 CE3 TRP 36 -8.990 53.841 24.366 1.00 3.22 C ATOM 339 CD1 TRP 36 -12.152 53.287 26.108 1.00 3.22 C ATOM 340 NE1 TRP 36 -12.531 53.753 24.873 1.00 3.22 N ATOM 342 CZ2 TRP 36 -11.301 54.486 22.794 1.00 3.22 C ATOM 343 CZ3 TRP 36 -8.872 54.328 23.041 1.00 3.22 C ATOM 344 CH2 TRP 36 -10.029 54.642 22.274 1.00 3.22 C ATOM 345 C TRP 36 -10.966 50.718 28.472 1.00 3.22 C ATOM 346 O TRP 36 -12.007 50.447 27.858 1.00 3.22 O ATOM 347 N ILE 37 -10.846 50.534 29.794 1.00 2.14 N ATOM 349 CA ILE 37 -11.983 49.993 30.562 1.00 2.14 C ATOM 350 CB ILE 37 -11.943 48.413 30.785 1.00 2.14 C ATOM 351 CG2 ILE 37 -12.495 47.712 29.566 1.00 2.14 C ATOM 352 CG1 ILE 37 -10.542 47.903 31.162 1.00 2.14 C ATOM 353 CD1 ILE 37 -10.293 47.823 32.643 1.00 2.14 C ATOM 354 C ILE 37 -12.635 50.520 31.834 1.00 2.14 C ATOM 355 O ILE 37 -11.984 50.985 32.769 1.00 2.14 O ATOM 356 N SER 38 -13.954 50.633 31.660 1.00 3.04 N ATOM 358 CA SER 38 -15.012 50.860 32.648 1.00 3.04 C ATOM 359 CB SER 38 -15.805 52.118 32.362 1.00 3.04 C ATOM 360 OG SER 38 -16.852 52.288 33.300 1.00 3.04 O ATOM 362 C SER 38 -15.560 49.676 31.843 1.00 3.04 C ATOM 363 O SER 38 -15.751 49.832 30.621 1.00 3.04 O ATOM 364 N SER 39 -15.855 48.523 32.436 1.00 3.21 N ATOM 366 CA SER 39 -16.192 47.447 31.512 1.00 3.21 C ATOM 367 CB SER 39 -15.200 46.292 31.711 1.00 3.21 C ATOM 368 OG SER 39 -15.499 45.527 32.865 1.00 3.21 O ATOM 370 C SER 39 -17.592 46.905 31.315 1.00 3.21 C ATOM 371 O SER 39 -18.220 46.343 32.214 1.00 3.21 O ATOM 372 N PHE 40 -18.043 47.136 30.077 1.00 4.49 N ATOM 374 CA PHE 40 -19.309 46.695 29.505 1.00 4.49 C ATOM 375 CB PHE 40 -20.351 47.843 29.530 1.00 4.49 C ATOM 376 CG PHE 40 -21.801 47.391 29.287 1.00 4.49 C ATOM 377 CD1 PHE 40 -22.490 46.588 30.229 1.00 4.49 C ATOM 378 CD2 PHE 40 -22.483 47.772 28.112 1.00 4.49 C ATOM 379 CE1 PHE 40 -23.827 46.168 30.004 1.00 4.49 C ATOM 380 CE2 PHE 40 -23.823 47.361 27.871 1.00 4.49 C ATOM 381 CZ PHE 40 -24.495 46.556 28.821 1.00 4.49 C ATOM 382 C PHE 40 -18.943 46.271 28.069 1.00 4.49 C ATOM 383 O PHE 40 -18.190 46.990 27.402 1.00 4.49 O ATOM 384 N ILE 41 -19.439 45.115 27.610 1.00 5.23 N ATOM 386 CA ILE 41 -19.178 44.611 26.243 1.00 5.23 C ATOM 387 CB ILE 41 -18.530 43.178 26.236 1.00 5.23 C ATOM 388 CG2 ILE 41 -18.122 42.768 24.790 1.00 5.23 C ATOM 389 CG1 ILE 41 -17.277 43.153 27.134 1.00 5.23 C ATOM 390 CD1 ILE 41 -16.930 41.786 27.748 1.00 5.23 C ATOM 391 C ILE 41 -20.521 44.681 25.485 1.00 5.23 C ATOM 392 O ILE 41 -21.582 44.459 26.084 1.00 5.23 O ATOM 393 N GLY 42 -20.461 44.990 24.185 1.00 6.63 N ATOM 395 CA GLY 42 -21.671 45.167 23.395 1.00 6.63 C ATOM 396 C GLY 42 -22.224 44.246 22.313 1.00 6.63 C ATOM 397 O GLY 42 -21.500 43.625 21.526 1.00 6.63 O ATOM 398 N ARG 43 -23.562 44.197 22.338 1.00 8.18 N ATOM 400 CA ARG 43 -24.507 43.496 21.440 1.00 8.18 C ATOM 401 CB ARG 43 -25.327 42.450 22.219 1.00 8.18 C ATOM 402 CG ARG 43 -25.983 41.360 21.355 1.00 8.18 C ATOM 403 CD ARG 43 -26.778 40.359 22.192 1.00 8.18 C ATOM 404 NE ARG 43 -25.923 39.504 23.020 1.00 8.18 N ATOM 406 CZ ARG 43 -26.358 38.550 23.845 1.00 8.18 C ATOM 407 NH1 ARG 43 -25.484 37.841 24.544 1.00 8.18 N ATOM 410 NH2 ARG 43 -27.657 38.297 23.980 1.00 8.18 N ATOM 413 C ARG 43 -25.342 44.768 21.165 1.00 8.18 C ATOM 414 O ARG 43 -25.426 45.606 22.078 1.00 8.18 O ATOM 415 N SER 44 -25.978 44.955 19.996 1.00 8.43 N ATOM 417 CA SER 44 -26.625 46.266 19.835 1.00 8.43 C ATOM 418 CB SER 44 -26.164 46.897 18.502 1.00 8.43 C ATOM 419 OG SER 44 -26.490 48.277 18.418 1.00 8.43 O ATOM 421 C SER 44 -28.137 46.513 20.017 1.00 8.43 C ATOM 422 O SER 44 -29.020 45.988 19.329 1.00 8.43 O ATOM 423 N LYS 45 -28.313 47.277 21.102 1.00 8.85 N ATOM 425 CA LYS 45 -29.487 47.925 21.728 1.00 8.85 C ATOM 426 CG LYS 45 -30.507 45.801 22.774 1.00 8.85 C ATOM 427 CD LYS 45 -30.914 45.147 24.086 1.00 8.85 C ATOM 428 CE LYS 45 -31.491 43.759 23.856 1.00 8.85 C ATOM 429 NZ LYS 45 -31.893 43.107 25.132 1.00 8.85 N ATOM 433 C LYS 45 -28.657 49.176 22.089 1.00 8.85 C ATOM 434 O LYS 45 -27.433 49.014 22.209 1.00 8.85 O ATOM 435 CB LYS 45 -29.927 47.191 23.006 1.00 8.85 C TER 2232 LEU 249 END