####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS458_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 2 - 19 4.83 29.86 LCS_AVERAGE: 35.43 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.89 29.35 LCS_AVERAGE: 16.74 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.65 29.75 LCS_AVERAGE: 11.93 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 18 3 3 3 3 4 6 7 8 9 11 13 15 18 19 19 21 22 22 23 24 LCS_GDT V 3 V 3 5 7 18 4 5 6 7 7 8 9 10 11 12 13 15 18 19 19 21 23 23 25 26 LCS_GDT Q 4 Q 4 5 7 18 4 5 6 7 7 8 9 10 11 12 15 16 19 22 23 26 27 27 29 30 LCS_GDT G 5 G 5 5 7 18 4 5 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT P 6 P 6 5 7 18 4 5 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT W 7 W 7 5 7 18 4 4 5 7 7 8 9 10 11 12 16 20 22 24 25 26 27 27 29 30 LCS_GDT V 8 V 8 4 10 18 4 4 4 4 6 8 9 10 11 12 13 15 18 19 19 21 22 26 29 30 LCS_GDT G 9 G 9 9 10 18 7 8 9 9 9 9 9 10 11 12 13 15 18 19 19 21 25 27 29 30 LCS_GDT S 10 S 10 9 10 18 7 8 9 9 9 9 9 10 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT S 11 S 11 9 10 18 7 8 9 9 9 9 9 10 11 14 16 19 22 24 25 26 27 27 29 30 LCS_GDT Y 12 Y 12 9 10 18 7 8 9 9 9 9 9 10 11 12 16 18 21 24 25 26 27 27 29 30 LCS_GDT V 13 V 13 9 10 18 7 8 9 9 9 9 9 10 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT A 14 A 14 9 10 18 7 8 9 9 9 9 9 10 11 13 17 20 22 24 25 26 27 27 29 30 LCS_GDT E 15 E 15 9 10 18 7 8 9 9 9 9 9 10 11 12 15 20 22 24 25 26 27 27 29 30 LCS_GDT T 16 T 16 9 10 18 7 8 9 9 9 9 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT G 17 G 17 9 10 18 3 5 9 9 9 9 9 10 11 12 16 18 21 24 25 26 27 27 29 30 LCS_GDT Q 18 Q 18 4 4 18 3 3 4 4 5 7 8 10 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT N 19 N 19 4 4 18 3 3 5 5 6 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT W 20 W 20 6 7 16 5 5 6 7 7 7 8 9 11 12 14 16 19 22 24 26 27 27 29 30 LCS_GDT A 21 A 21 6 7 16 5 5 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT S 22 S 22 6 7 16 5 5 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT L 23 L 23 6 7 16 5 5 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT A 24 A 24 6 7 16 5 5 6 7 7 7 8 11 11 13 17 20 22 24 25 26 27 27 29 30 LCS_GDT A 25 A 25 6 7 16 3 4 6 7 7 7 8 10 10 12 16 20 22 24 25 26 27 27 29 30 LCS_GDT N 26 N 26 3 7 16 3 3 6 7 7 7 8 10 10 11 16 20 22 24 25 26 27 27 29 30 LCS_GDT E 27 E 27 3 6 16 3 3 4 5 6 7 8 10 10 11 12 14 15 20 20 25 26 27 28 30 LCS_GDT L 28 L 28 3 6 16 2 3 4 5 6 7 8 10 10 11 12 14 16 18 19 22 25 27 28 30 LCS_GDT R 29 R 29 3 6 16 3 3 4 5 6 7 8 10 10 12 14 18 22 24 25 26 27 27 29 30 LCS_GDT V 30 V 30 3 6 16 3 4 4 5 6 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT T 31 T 31 5 8 16 3 4 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT E 32 E 32 5 8 16 3 4 6 7 7 8 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT R 33 R 33 5 8 16 3 4 6 7 7 7 9 11 13 14 17 20 22 24 25 26 27 27 29 30 LCS_GDT P 34 P 34 5 8 13 3 4 6 7 7 7 8 10 11 13 17 20 22 24 25 26 27 27 29 30 LCS_GDT F 35 F 35 5 8 13 3 4 6 7 7 7 8 8 9 10 11 15 17 20 23 24 26 27 28 29 LCS_GDT W 36 W 36 5 8 13 3 4 6 7 7 7 8 8 9 9 10 10 11 12 15 19 21 22 25 26 LCS_GDT I 37 I 37 5 8 11 3 4 5 7 7 7 8 8 9 9 10 10 10 11 11 12 14 15 18 19 LCS_GDT S 38 S 38 3 8 11 0 3 5 6 6 7 8 8 9 9 10 10 10 11 11 12 13 15 18 19 LCS_GDT S 39 S 39 3 4 11 0 3 3 3 4 5 7 7 9 9 10 10 10 11 11 12 12 13 13 14 LCS_GDT F 40 F 40 3 6 11 3 3 3 3 4 6 7 7 9 9 10 10 10 11 11 12 12 13 13 14 LCS_GDT I 41 I 41 3 6 11 3 3 4 5 5 6 7 7 9 9 10 10 10 11 11 12 12 13 13 14 LCS_GDT G 42 G 42 3 6 11 3 3 3 5 5 6 7 7 9 9 10 10 10 11 11 12 12 13 13 14 LCS_GDT R 43 R 43 3 6 11 3 3 4 5 5 6 7 7 8 9 9 10 10 11 11 12 12 13 13 14 LCS_GDT S 44 S 44 3 6 11 3 3 4 5 5 6 7 7 8 9 9 10 10 11 11 12 12 13 13 14 LCS_GDT K 45 K 45 3 6 11 3 3 4 5 5 6 7 7 8 9 9 10 10 11 11 12 12 13 13 14 LCS_AVERAGE LCS_A: 21.37 ( 11.93 16.74 35.43 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 9 9 9 9 9 11 13 14 17 20 22 24 25 26 27 27 29 30 GDT PERCENT_AT 15.91 18.18 20.45 20.45 20.45 20.45 20.45 25.00 29.55 31.82 38.64 45.45 50.00 54.55 56.82 59.09 61.36 61.36 65.91 68.18 GDT RMS_LOCAL 0.20 0.28 0.65 0.65 0.65 0.65 0.65 2.86 3.46 3.62 4.15 4.64 4.85 5.09 5.20 5.35 5.55 5.55 6.04 6.31 GDT RMS_ALL_AT 30.01 30.09 29.75 29.75 29.75 29.75 29.75 17.15 17.02 17.00 16.83 16.94 17.25 17.31 17.19 17.09 17.06 17.06 17.35 17.10 # Checking swapping # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.274 0 0.465 0.529 18.274 0.000 0.000 - LGA V 3 V 3 14.741 0 0.464 0.581 15.943 0.000 0.000 12.799 LGA Q 4 Q 4 10.223 0 0.083 0.652 16.848 0.000 0.000 13.844 LGA G 5 G 5 3.846 0 0.066 0.066 6.494 10.000 10.000 - LGA P 6 P 6 2.517 0 0.640 0.525 5.611 27.273 16.623 5.611 LGA W 7 W 7 5.905 0 0.390 1.167 14.483 1.364 0.519 14.483 LGA V 8 V 8 10.994 0 0.397 1.251 14.988 0.000 0.000 14.988 LGA G 9 G 9 10.534 0 0.547 0.547 10.534 0.000 0.000 - LGA S 10 S 10 7.105 0 0.068 0.646 7.543 0.000 0.000 7.163 LGA S 11 S 11 7.665 0 0.037 0.652 11.578 0.000 0.000 11.578 LGA Y 12 Y 12 7.826 0 0.088 1.194 16.954 0.000 0.000 16.954 LGA V 13 V 13 7.367 0 0.053 0.950 11.133 0.000 0.000 11.133 LGA A 14 A 14 9.304 0 0.024 0.024 10.852 0.000 0.000 - LGA E 15 E 15 9.557 0 0.035 1.148 16.166 0.000 0.000 16.166 LGA T 16 T 16 6.544 0 0.129 0.999 7.086 0.000 0.000 6.968 LGA G 17 G 17 9.418 0 0.246 0.246 9.780 0.000 0.000 - LGA Q 18 Q 18 7.417 0 0.626 1.343 14.737 1.818 0.808 13.348 LGA N 19 N 19 2.244 0 0.033 1.065 3.956 19.545 26.364 2.222 LGA W 20 W 20 5.882 0 0.603 1.178 17.567 6.364 1.818 17.567 LGA A 21 A 21 2.050 0 0.032 0.031 3.623 45.455 46.545 - LGA S 22 S 22 3.599 0 0.082 0.679 5.544 17.273 11.818 4.801 LGA L 23 L 23 1.493 0 0.015 0.888 5.590 43.182 31.591 3.388 LGA A 24 A 24 3.978 0 0.167 0.163 5.686 12.727 11.273 - LGA A 25 A 25 5.739 0 0.261 0.279 7.103 0.455 0.364 - LGA N 26 N 26 7.512 0 0.136 0.867 10.475 0.000 0.000 6.239 LGA E 27 E 27 12.398 0 0.106 0.897 18.227 0.000 0.000 15.766 LGA L 28 L 28 12.312 0 0.336 0.575 16.566 0.000 0.000 14.845 LGA R 29 R 29 8.556 0 0.616 1.662 15.687 0.000 0.000 15.687 LGA V 30 V 30 2.536 0 0.657 0.881 4.659 40.909 38.182 4.659 LGA T 31 T 31 2.696 0 0.686 1.325 7.453 39.545 22.857 4.594 LGA E 32 E 32 2.114 0 0.114 1.347 7.351 37.273 16.768 6.940 LGA R 33 R 33 3.242 0 0.075 1.043 10.315 31.364 12.893 10.315 LGA P 34 P 34 7.289 0 0.021 0.064 8.680 0.000 0.000 7.056 LGA F 35 F 35 11.006 0 0.114 1.322 14.820 0.000 0.000 10.989 LGA W 36 W 36 17.351 0 0.051 1.060 24.338 0.000 0.000 23.807 LGA I 37 I 37 22.408 0 0.713 1.374 25.082 0.000 0.000 22.233 LGA S 38 S 38 25.969 0 0.658 0.693 26.968 0.000 0.000 25.488 LGA S 39 S 39 24.889 0 0.659 0.554 27.695 0.000 0.000 23.513 LGA F 40 F 40 31.541 0 0.658 1.383 37.590 0.000 0.000 37.408 LGA I 41 I 41 35.074 0 0.084 1.084 38.969 0.000 0.000 38.969 LGA G 42 G 42 36.460 0 0.586 0.586 38.218 0.000 0.000 - LGA R 43 R 43 39.401 0 0.161 0.971 40.189 0.000 0.000 39.235 LGA S 44 S 44 41.625 0 0.202 0.178 42.366 0.000 0.000 42.194 LGA K 45 K 45 41.537 0 0.155 0.389 44.916 0.000 0.000 44.916 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 15.168 15.036 16.185 7.603 5.646 1.766 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.86 30.682 26.492 0.371 LGA_LOCAL RMSD: 2.861 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.149 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 15.168 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.377565 * X + 0.918699 * Y + -0.115919 * Z + -18.867783 Y_new = 0.192147 * X + 0.200191 * Y + 0.960730 * Z + 59.836521 Z_new = 0.905828 * X + 0.340465 * Y + -0.252111 * Z + 38.856907 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.670841 -1.133330 2.208184 [DEG: 153.0279 -64.9350 126.5196 ] ZXZ: -3.021516 1.825657 1.211272 [DEG: -173.1201 104.6025 69.4008 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS458_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.86 26.492 15.17 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS458_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 10.571 32.422 -3.973 1.00 9.91 N ATOM 14 CA ALA 2 9.638 31.297 -4.155 1.00 9.91 C ATOM 15 CB ALA 2 9.639 30.425 -2.898 1.00 9.91 C ATOM 16 C ALA 2 8.207 31.770 -4.514 1.00 9.91 C ATOM 17 O ALA 2 7.839 31.752 -5.695 1.00 9.91 O ATOM 18 N VAL 3 7.423 32.183 -3.503 1.00 9.73 N ATOM 20 CA VAL 3 6.040 32.686 -3.664 1.00 9.73 C ATOM 21 CB VAL 3 5.017 31.911 -2.715 1.00 9.73 C ATOM 22 CG1 VAL 3 3.592 32.491 -2.814 1.00 9.73 C ATOM 23 CG2 VAL 3 4.960 30.441 -3.102 1.00 9.73 C ATOM 24 C VAL 3 6.022 34.228 -3.455 1.00 9.73 C ATOM 25 O VAL 3 6.138 34.975 -4.434 1.00 9.73 O ATOM 26 N GLN 4 5.877 34.679 -2.199 1.00 8.57 N ATOM 28 CA GLN 4 5.841 36.107 -1.820 1.00 8.57 C ATOM 29 CB GLN 4 4.409 36.560 -1.436 1.00 8.57 C ATOM 30 CG GLN 4 3.581 35.625 -0.533 1.00 8.57 C ATOM 31 CD GLN 4 2.204 36.181 -0.226 1.00 8.57 C ATOM 32 OE1 GLN 4 2.013 36.885 0.766 1.00 8.57 O ATOM 33 NE2 GLN 4 1.233 35.865 -1.077 1.00 8.57 N ATOM 36 C GLN 4 6.841 36.405 -0.695 1.00 8.57 C ATOM 37 O GLN 4 6.873 35.685 0.308 1.00 8.57 O ATOM 38 N GLY 5 7.653 37.454 -0.875 1.00 9.92 N ATOM 40 CA GLY 5 8.671 37.841 0.103 1.00 9.92 C ATOM 41 C GLY 5 8.168 38.426 1.427 1.00 9.92 C ATOM 42 O GLY 5 6.956 38.656 1.512 1.00 9.92 O ATOM 43 N PRO 6 9.021 38.677 2.473 1.00 11.14 N ATOM 44 CD PRO 6 8.380 39.338 3.630 1.00 11.14 C ATOM 45 CA PRO 6 10.475 38.529 2.737 1.00 11.14 C ATOM 46 CB PRO 6 10.621 39.076 4.168 1.00 11.14 C ATOM 47 CG PRO 6 9.253 38.924 4.777 1.00 11.14 C ATOM 48 C PRO 6 11.085 37.108 2.596 1.00 11.14 C ATOM 49 O PRO 6 10.424 36.214 2.058 1.00 11.14 O ATOM 50 N TRP 7 12.341 36.921 3.054 1.00 11.30 N ATOM 52 CA TRP 7 13.083 35.629 3.019 1.00 11.30 C ATOM 53 CB TRP 7 12.364 34.513 3.840 1.00 11.30 C ATOM 54 CG TRP 7 13.262 33.389 4.431 1.00 11.30 C ATOM 55 CD2 TRP 7 13.959 33.392 5.697 1.00 11.30 C ATOM 56 CE2 TRP 7 14.617 32.136 5.814 1.00 11.30 C ATOM 57 CE3 TRP 7 14.093 34.333 6.745 1.00 11.30 C ATOM 58 CD1 TRP 7 13.524 32.165 3.861 1.00 11.30 C ATOM 59 NE1 TRP 7 14.331 31.418 4.684 1.00 11.30 N ATOM 61 CZ2 TRP 7 15.402 31.787 6.941 1.00 11.30 C ATOM 62 CZ3 TRP 7 14.879 33.988 7.874 1.00 11.30 C ATOM 63 CH2 TRP 7 15.521 32.721 7.955 1.00 11.30 C ATOM 64 C TRP 7 13.449 35.133 1.601 1.00 11.30 C ATOM 65 O TRP 7 12.733 35.429 0.637 1.00 11.30 O ATOM 66 N VAL 8 14.553 34.376 1.497 1.00 10.77 N ATOM 68 CA VAL 8 15.049 33.817 0.220 1.00 10.77 C ATOM 69 CB VAL 8 16.617 33.982 0.056 1.00 10.77 C ATOM 70 CG1 VAL 8 16.949 35.423 -0.302 1.00 10.77 C ATOM 71 CG2 VAL 8 17.383 33.576 1.336 1.00 10.77 C ATOM 72 C VAL 8 14.580 32.341 0.196 1.00 10.77 C ATOM 73 O VAL 8 15.329 31.388 -0.062 1.00 10.77 O ATOM 74 N GLY 9 13.275 32.238 0.461 1.00 10.19 N ATOM 76 CA GLY 9 12.510 31.004 0.523 1.00 10.19 C ATOM 77 C GLY 9 11.137 31.544 0.885 1.00 10.19 C ATOM 78 O GLY 9 10.664 31.360 2.009 1.00 10.19 O ATOM 79 N SER 10 10.535 32.253 -0.078 1.00 9.04 N ATOM 81 CA SER 10 9.226 32.923 0.031 1.00 9.04 C ATOM 82 CB SER 10 8.960 33.747 -1.224 1.00 9.04 C ATOM 83 OG SER 10 9.673 34.970 -1.179 1.00 9.04 O ATOM 85 C SER 10 8.001 32.067 0.379 1.00 9.04 C ATOM 86 O SER 10 7.088 32.547 1.062 1.00 9.04 O ATOM 87 N SER 11 7.980 30.822 -0.115 1.00 9.38 N ATOM 89 CA SER 11 6.903 29.844 0.139 1.00 9.38 C ATOM 90 OG SER 11 7.138 28.658 -1.987 1.00 9.38 O ATOM 92 C SER 11 6.802 29.595 1.654 1.00 9.38 C ATOM 93 O SER 11 5.704 29.433 2.197 1.00 9.38 O ATOM 94 CB SER 11 7.203 28.528 -0.579 1.00 9.38 C ATOM 95 N TYR 12 7.974 29.619 2.308 1.00 9.85 N ATOM 97 CA TYR 12 8.153 29.421 3.757 1.00 9.85 C ATOM 98 CB TYR 12 9.658 29.273 4.068 1.00 9.85 C ATOM 99 CG TYR 12 10.368 28.048 3.476 1.00 9.85 C ATOM 100 CD1 TYR 12 10.458 26.833 4.201 1.00 9.85 C ATOM 101 CE1 TYR 12 11.144 25.706 3.671 1.00 9.85 C ATOM 102 CD2 TYR 12 10.987 28.104 2.203 1.00 9.85 C ATOM 103 CE2 TYR 12 11.677 26.982 1.666 1.00 9.85 C ATOM 104 CZ TYR 12 11.749 25.791 2.407 1.00 9.85 C ATOM 105 OH TYR 12 12.414 24.704 1.888 1.00 9.85 O ATOM 107 C TYR 12 7.577 30.561 4.616 1.00 9.85 C ATOM 108 O TYR 12 6.840 30.299 5.574 1.00 9.85 O ATOM 109 N VAL 13 7.880 31.811 4.232 1.00 9.10 N ATOM 111 CA VAL 13 7.425 33.032 4.929 1.00 9.10 C ATOM 112 CB VAL 13 8.271 34.297 4.466 1.00 9.10 C ATOM 113 CG1 VAL 13 7.878 34.785 3.074 1.00 9.10 C ATOM 114 CG2 VAL 13 8.204 35.424 5.507 1.00 9.10 C ATOM 115 C VAL 13 5.893 33.218 4.771 1.00 9.10 C ATOM 116 O VAL 13 5.212 33.643 5.713 1.00 9.10 O ATOM 117 N ALA 14 5.390 32.867 3.578 1.00 8.24 N ATOM 119 CA ALA 14 3.966 32.945 3.206 1.00 8.24 C ATOM 120 CB ALA 14 3.811 32.737 1.709 1.00 8.24 C ATOM 121 C ALA 14 3.107 31.930 3.979 1.00 8.24 C ATOM 122 O ALA 14 2.030 32.282 4.475 1.00 8.24 O ATOM 123 N GLU 15 3.609 30.690 4.094 1.00 8.67 N ATOM 125 CA GLU 15 2.941 29.585 4.813 1.00 8.67 C ATOM 126 CB GLU 15 3.608 28.241 4.492 1.00 8.67 C ATOM 127 CG GLU 15 3.231 27.660 3.133 1.00 8.67 C ATOM 128 CD GLU 15 3.909 26.331 2.854 1.00 8.67 C ATOM 129 OE1 GLU 15 5.020 26.338 2.284 1.00 8.67 O ATOM 130 OE2 GLU 15 3.330 25.281 3.203 1.00 8.67 O ATOM 131 C GLU 15 2.884 29.803 6.337 1.00 8.67 C ATOM 132 O GLU 15 1.838 29.570 6.952 1.00 8.67 O ATOM 133 N THR 16 3.995 30.279 6.920 1.00 8.92 N ATOM 135 CA THR 16 4.114 30.567 8.368 1.00 8.92 C ATOM 136 CB THR 16 5.604 30.818 8.786 1.00 8.92 C ATOM 137 OG1 THR 16 6.452 29.897 8.090 1.00 8.92 O ATOM 139 CG2 THR 16 5.808 30.596 10.296 1.00 8.92 C ATOM 140 C THR 16 3.222 31.775 8.736 1.00 8.92 C ATOM 141 O THR 16 2.592 31.780 9.799 1.00 8.92 O ATOM 142 N GLY 17 3.153 32.759 7.828 1.00 7.96 N ATOM 144 CA GLY 17 2.342 33.962 8.015 1.00 7.96 C ATOM 145 C GLY 17 0.841 33.704 7.989 1.00 7.96 C ATOM 146 O GLY 17 0.104 34.231 8.833 1.00 7.96 O ATOM 147 N GLN 18 0.408 32.867 7.034 1.00 7.76 N ATOM 149 CA GLN 18 -1.002 32.475 6.846 1.00 7.76 C ATOM 150 CB GLN 18 -1.197 31.748 5.509 1.00 7.76 C ATOM 151 CG GLN 18 -1.154 32.652 4.284 1.00 7.76 C ATOM 152 CD GLN 18 -1.351 31.889 2.988 1.00 7.76 C ATOM 153 OE1 GLN 18 -0.387 31.437 2.368 1.00 7.76 O ATOM 154 NE2 GLN 18 -2.603 31.741 2.570 1.00 7.76 N ATOM 157 C GLN 18 -1.524 31.605 8.003 1.00 7.76 C ATOM 158 O GLN 18 -2.650 31.811 8.467 1.00 7.76 O ATOM 159 N ASN 19 -0.693 30.655 8.460 1.00 8.00 N ATOM 161 CA ASN 19 -1.007 29.742 9.579 1.00 8.00 C ATOM 162 CB ASN 19 -0.001 28.583 9.636 1.00 8.00 C ATOM 163 CG ASN 19 -0.377 27.429 8.713 1.00 8.00 C ATOM 164 OD1 ASN 19 -1.002 26.458 9.143 1.00 8.00 O ATOM 165 ND2 ASN 19 0.013 27.523 7.444 1.00 8.00 N ATOM 168 C ASN 19 -1.069 30.464 10.939 1.00 8.00 C ATOM 169 O ASN 19 -1.932 30.152 11.767 1.00 8.00 O ATOM 170 N TRP 20 -0.174 31.446 11.132 1.00 8.10 N ATOM 172 CA TRP 20 -0.083 32.260 12.362 1.00 8.10 C ATOM 173 CB TRP 20 1.211 33.111 12.352 1.00 8.10 C ATOM 174 CG TRP 20 1.730 33.615 13.730 1.00 8.10 C ATOM 175 CD2 TRP 20 2.604 32.922 14.650 1.00 8.10 C ATOM 176 CE2 TRP 20 2.826 33.794 15.753 1.00 8.10 C ATOM 177 CE3 TRP 20 3.222 31.649 14.652 1.00 8.10 C ATOM 178 CD1 TRP 20 1.474 34.838 14.307 1.00 8.10 C ATOM 179 NE1 TRP 20 2.125 34.946 15.511 1.00 8.10 N ATOM 181 CZ2 TRP 20 3.642 33.439 16.855 1.00 8.10 C ATOM 182 CZ3 TRP 20 4.039 31.291 15.754 1.00 8.10 C ATOM 183 CH2 TRP 20 4.238 32.191 16.838 1.00 8.10 C ATOM 184 C TRP 20 -1.327 33.159 12.485 1.00 8.10 C ATOM 185 O TRP 20 -1.913 33.236 13.559 1.00 8.10 O ATOM 186 N ALA 21 -1.733 33.771 11.360 1.00 7.57 N ATOM 188 CA ALA 21 -2.904 34.659 11.247 1.00 7.57 C ATOM 189 CB ALA 21 -2.897 35.361 9.895 1.00 7.57 C ATOM 190 C ALA 21 -4.214 33.881 11.430 1.00 7.57 C ATOM 191 O ALA 21 -5.145 34.389 12.064 1.00 7.57 O ATOM 192 N SER 22 -4.231 32.641 10.908 1.00 7.58 N ATOM 194 CA SER 22 -5.364 31.684 10.947 1.00 7.58 C ATOM 195 CB SER 22 -5.039 30.436 10.109 1.00 7.58 C ATOM 196 OG SER 22 -6.168 29.587 9.968 1.00 7.58 O ATOM 198 C SER 22 -5.701 31.289 12.397 1.00 7.58 C ATOM 199 O SER 22 -6.832 30.913 12.692 1.00 7.58 O ATOM 200 N LEU 23 -4.653 31.088 13.190 1.00 7.61 N ATOM 202 CA LEU 23 -4.743 30.824 14.626 1.00 7.61 C ATOM 203 CB LEU 23 -3.482 30.075 15.129 1.00 7.61 C ATOM 204 CG LEU 23 -3.126 28.560 15.054 1.00 7.61 C ATOM 205 CD1 LEU 23 -3.958 27.719 16.036 1.00 7.61 C ATOM 206 CD2 LEU 23 -3.177 27.965 13.634 1.00 7.61 C ATOM 207 C LEU 23 -4.968 32.101 15.456 1.00 7.61 C ATOM 208 O LEU 23 -5.690 32.083 16.459 1.00 7.61 O ATOM 209 N ALA 24 -4.425 33.218 14.941 1.00 7.55 N ATOM 211 CA ALA 24 -4.329 34.494 15.667 1.00 7.55 C ATOM 212 CB ALA 24 -3.388 35.408 14.910 1.00 7.55 C ATOM 213 C ALA 24 -5.384 35.362 16.341 1.00 7.55 C ATOM 214 O ALA 24 -5.172 35.569 17.534 1.00 7.55 O ATOM 215 N ALA 25 -6.465 35.925 15.768 1.00 7.49 N ATOM 217 CA ALA 25 -7.244 36.639 16.811 1.00 7.49 C ATOM 218 CB ALA 25 -8.108 37.744 16.190 1.00 7.49 C ATOM 219 C ALA 25 -8.116 35.564 17.487 1.00 7.49 C ATOM 220 O ALA 25 -7.646 34.914 18.426 1.00 7.49 O ATOM 221 N ASN 26 -9.358 35.367 17.018 1.00 7.42 N ATOM 223 CA ASN 26 -10.176 34.194 17.347 1.00 7.42 C ATOM 224 CB ASN 26 -11.603 34.590 17.786 1.00 7.42 C ATOM 225 CG ASN 26 -11.623 35.390 19.086 1.00 7.42 C ATOM 226 OD1 ASN 26 -11.562 36.621 19.072 1.00 7.42 O ATOM 227 ND2 ASN 26 -11.727 34.689 20.212 1.00 7.42 N ATOM 230 C ASN 26 -10.133 33.639 15.920 1.00 7.42 C ATOM 231 O ASN 26 -10.177 32.430 15.703 1.00 7.42 O ATOM 232 N GLU 27 -10.740 34.588 15.171 1.00 7.15 N ATOM 234 CA GLU 27 -10.958 34.775 13.727 1.00 7.15 C ATOM 235 CG GLU 27 -13.426 34.012 13.716 1.00 7.15 C ATOM 236 CD GLU 27 -14.861 34.425 13.444 1.00 7.15 C ATOM 237 OE1 GLU 27 -15.530 34.908 14.382 1.00 7.15 O ATOM 238 OE2 GLU 27 -15.320 34.265 12.293 1.00 7.15 O ATOM 239 C GLU 27 -10.052 35.661 12.827 1.00 7.15 C ATOM 240 O GLU 27 -9.755 35.295 11.690 1.00 7.15 O ATOM 241 CB GLU 27 -12.429 35.142 13.468 1.00 7.15 C ATOM 242 N LEU 28 -9.804 36.903 13.281 1.00 7.15 N ATOM 244 CA LEU 28 -9.087 37.947 12.503 1.00 7.15 C ATOM 245 CB LEU 28 -9.585 39.337 12.958 1.00 7.15 C ATOM 246 CG LEU 28 -11.012 39.830 12.651 1.00 7.15 C ATOM 247 CD1 LEU 28 -11.598 40.479 13.896 1.00 7.15 C ATOM 248 CD2 LEU 28 -11.040 40.811 11.469 1.00 7.15 C ATOM 249 C LEU 28 -7.589 38.071 12.173 1.00 7.15 C ATOM 250 O LEU 28 -7.249 38.092 10.986 1.00 7.15 O ATOM 251 N ARG 29 -6.709 38.064 13.192 1.00 6.95 N ATOM 253 CA ARG 29 -5.225 38.216 13.084 1.00 6.95 C ATOM 254 CB ARG 29 -4.809 39.286 12.045 1.00 6.95 C ATOM 255 CG ARG 29 -4.129 38.731 10.804 1.00 6.95 C ATOM 256 CD ARG 29 -3.748 39.844 9.840 1.00 6.95 C ATOM 257 NE ARG 29 -3.085 39.329 8.639 1.00 6.95 N ATOM 259 CZ ARG 29 -2.633 40.078 7.631 1.00 6.95 C ATOM 260 NH1 ARG 29 -2.757 41.402 7.648 1.00 6.95 N ATOM 263 NH2 ARG 29 -2.048 39.494 6.595 1.00 6.95 N ATOM 266 C ARG 29 -4.640 38.638 14.447 1.00 6.95 C ATOM 267 O ARG 29 -5.397 38.940 15.373 1.00 6.95 O ATOM 268 N VAL 30 -3.300 38.716 14.535 1.00 7.15 N ATOM 270 CA VAL 30 -2.544 39.105 15.753 1.00 7.15 C ATOM 271 CB VAL 30 -0.982 38.994 15.542 1.00 7.15 C ATOM 272 CG1 VAL 30 -0.546 37.542 15.628 1.00 7.15 C ATOM 273 CG2 VAL 30 -0.539 39.595 14.189 1.00 7.15 C ATOM 274 C VAL 30 -2.899 40.493 16.350 1.00 7.15 C ATOM 275 O VAL 30 -2.884 40.665 17.578 1.00 7.15 O ATOM 276 N THR 31 -3.245 41.444 15.469 1.00 6.66 N ATOM 278 CA THR 31 -3.621 42.826 15.839 1.00 6.66 C ATOM 279 CB THR 31 -2.977 43.892 14.852 1.00 6.66 C ATOM 280 OG1 THR 31 -3.447 45.209 15.173 1.00 6.66 O ATOM 282 CG2 THR 31 -3.268 43.576 13.367 1.00 6.66 C ATOM 283 C THR 31 -5.156 43.000 15.961 1.00 6.66 C ATOM 284 O THR 31 -5.911 42.359 15.218 1.00 6.66 O ATOM 285 N GLU 32 -5.587 43.855 16.900 1.00 5.60 N ATOM 287 CA GLU 32 -7.011 44.141 17.161 1.00 5.60 C ATOM 288 CB GLU 32 -7.316 44.116 18.681 1.00 5.60 C ATOM 289 CG GLU 32 -6.363 44.910 19.602 1.00 5.60 C ATOM 290 CD GLU 32 -6.753 44.819 21.065 1.00 5.60 C ATOM 291 OE1 GLU 32 -6.275 43.892 21.753 1.00 5.60 O ATOM 292 OE2 GLU 32 -7.537 45.673 21.528 1.00 5.60 O ATOM 293 C GLU 32 -7.551 45.426 16.494 1.00 5.60 C ATOM 294 O GLU 32 -7.031 46.525 16.733 1.00 5.60 O ATOM 295 N ARG 33 -8.565 45.254 15.634 1.00 5.95 N ATOM 297 CA ARG 33 -9.230 46.345 14.895 1.00 5.95 C ATOM 298 CB ARG 33 -9.002 46.215 13.366 1.00 5.95 C ATOM 299 CG ARG 33 -9.194 44.810 12.738 1.00 5.95 C ATOM 300 CD ARG 33 -8.953 44.812 11.230 1.00 5.95 C ATOM 301 NE ARG 33 -7.546 45.034 10.877 1.00 5.95 N ATOM 303 CZ ARG 33 -7.061 45.066 9.636 1.00 5.95 C ATOM 304 NH1 ARG 33 -5.765 45.277 9.446 1.00 5.95 N ATOM 307 NH2 ARG 33 -7.853 44.893 8.582 1.00 5.95 N ATOM 310 C ARG 33 -10.746 46.414 15.229 1.00 5.95 C ATOM 311 O ARG 33 -11.350 45.360 15.461 1.00 5.95 O ATOM 312 N PRO 34 -11.377 47.636 15.285 1.00 5.17 N ATOM 313 CD PRO 34 -12.853 47.556 15.358 1.00 5.17 C ATOM 314 CA PRO 34 -10.986 49.056 15.100 1.00 5.17 C ATOM 315 CB PRO 34 -12.336 49.782 15.082 1.00 5.17 C ATOM 316 CG PRO 34 -13.277 48.764 14.562 1.00 5.17 C ATOM 317 C PRO 34 -10.073 49.636 16.204 1.00 5.17 C ATOM 318 O PRO 34 -9.922 49.020 17.265 1.00 5.17 O ATOM 319 N PHE 35 -9.480 50.810 15.934 1.00 3.53 N ATOM 321 CA PHE 35 -8.576 51.510 16.865 1.00 3.53 C ATOM 322 CB PHE 35 -7.233 51.849 16.157 1.00 3.53 C ATOM 323 CG PHE 35 -6.412 50.634 15.725 1.00 3.53 C ATOM 324 CD1 PHE 35 -6.578 50.068 14.436 1.00 3.53 C ATOM 325 CD2 PHE 35 -5.440 50.071 16.587 1.00 3.53 C ATOM 326 CE1 PHE 35 -5.791 48.962 14.013 1.00 3.53 C ATOM 327 CE2 PHE 35 -4.647 48.964 16.178 1.00 3.53 C ATOM 328 CZ PHE 35 -4.822 48.409 14.887 1.00 3.53 C ATOM 329 C PHE 35 -9.184 52.811 17.408 1.00 3.53 C ATOM 330 O PHE 35 -9.652 53.648 16.624 1.00 3.53 O ATOM 331 N TRP 36 -9.228 52.950 18.742 1.00 2.61 N ATOM 333 CA TRP 36 -9.737 54.172 19.388 1.00 2.61 C ATOM 334 CB TRP 36 -11.145 53.970 19.990 1.00 2.61 C ATOM 335 CG TRP 36 -12.210 55.086 19.782 1.00 2.61 C ATOM 336 CD2 TRP 36 -13.418 55.291 20.550 1.00 2.61 C ATOM 337 CE2 TRP 36 -14.102 56.391 19.967 1.00 2.61 C ATOM 338 CE3 TRP 36 -13.992 54.656 21.673 1.00 2.61 C ATOM 339 CD1 TRP 36 -12.227 56.051 18.803 1.00 2.61 C ATOM 340 NE1 TRP 36 -13.352 56.826 18.911 1.00 2.61 N ATOM 342 CZ2 TRP 36 -15.334 56.874 20.468 1.00 2.61 C ATOM 343 CZ3 TRP 36 -15.226 55.138 22.178 1.00 2.61 C ATOM 344 CH2 TRP 36 -15.877 56.239 21.568 1.00 2.61 C ATOM 345 C TRP 36 -8.760 54.712 20.441 1.00 2.61 C ATOM 346 O TRP 36 -8.340 54.000 21.361 1.00 2.61 O ATOM 347 N ILE 37 -8.380 55.974 20.220 1.00 1.16 N ATOM 349 CA ILE 37 -7.467 56.816 21.021 1.00 1.16 C ATOM 350 CB ILE 37 -6.113 57.087 20.283 1.00 1.16 C ATOM 351 CG2 ILE 37 -5.287 58.209 20.978 1.00 1.16 C ATOM 352 CG1 ILE 37 -5.292 55.785 20.212 1.00 1.16 C ATOM 353 CD1 ILE 37 -4.423 55.610 18.958 1.00 1.16 C ATOM 354 C ILE 37 -8.277 58.106 21.147 1.00 1.16 C ATOM 355 O ILE 37 -9.170 58.323 20.333 1.00 1.16 O ATOM 356 N SER 38 -8.058 58.892 22.207 1.00 2.40 N ATOM 358 CA SER 38 -8.804 60.141 22.380 1.00 2.40 C ATOM 359 CB SER 38 -9.379 60.236 23.772 1.00 2.40 C ATOM 360 OG SER 38 -9.660 58.954 24.286 1.00 2.40 O ATOM 362 C SER 38 -8.000 61.403 22.060 1.00 2.40 C ATOM 363 O SER 38 -6.791 61.465 22.314 1.00 2.40 O ATOM 364 N SER 39 -8.692 62.372 21.446 1.00 3.12 N ATOM 366 CA SER 39 -8.124 63.658 21.026 1.00 3.12 C ATOM 367 CB SER 39 -8.191 63.811 19.505 1.00 3.12 C ATOM 368 OG SER 39 -9.419 63.365 18.983 1.00 3.12 O ATOM 370 C SER 39 -8.692 64.889 21.729 1.00 3.12 C ATOM 371 O SER 39 -9.879 64.942 22.070 1.00 3.12 O ATOM 372 N PHE 40 -7.791 65.847 21.967 1.00 4.63 N ATOM 374 CA PHE 40 -8.033 67.124 22.648 1.00 4.63 C ATOM 375 CB PHE 40 -7.283 67.149 24.007 1.00 4.63 C ATOM 376 CG PHE 40 -7.789 68.197 25.009 1.00 4.63 C ATOM 377 CD1 PHE 40 -7.069 69.396 25.214 1.00 4.63 C ATOM 378 CD2 PHE 40 -8.961 67.975 25.776 1.00 4.63 C ATOM 379 CE1 PHE 40 -7.503 70.361 26.164 1.00 4.63 C ATOM 380 CE2 PHE 40 -9.407 68.930 26.730 1.00 4.63 C ATOM 381 CZ PHE 40 -8.677 70.127 26.924 1.00 4.63 C ATOM 382 C PHE 40 -7.594 68.285 21.734 1.00 4.63 C ATOM 383 O PHE 40 -6.757 68.087 20.845 1.00 4.63 O ATOM 384 N ILE 41 -8.218 69.457 21.917 1.00 6.14 N ATOM 386 CA ILE 41 -7.943 70.685 21.137 1.00 6.14 C ATOM 387 CB ILE 41 -9.258 71.373 20.621 1.00 6.14 C ATOM 388 CG2 ILE 41 -9.711 70.699 19.327 1.00 6.14 C ATOM 389 CG1 ILE 41 -10.375 71.382 21.693 1.00 6.14 C ATOM 390 CD1 ILE 41 -11.252 72.642 21.709 1.00 6.14 C ATOM 391 C ILE 41 -7.064 71.658 21.959 1.00 6.14 C ATOM 392 O ILE 41 -7.204 71.732 23.185 1.00 6.14 O ATOM 393 N GLY 42 -6.188 72.400 21.271 1.00 7.08 N ATOM 395 CA GLY 42 -5.224 73.257 21.953 1.00 7.08 C ATOM 396 C GLY 42 -5.163 74.771 22.120 1.00 7.08 C ATOM 397 O GLY 42 -5.540 75.572 21.257 1.00 7.08 O ATOM 398 N ARG 43 -4.663 75.092 23.320 1.00 8.54 N ATOM 400 CA ARG 43 -4.359 76.405 23.934 1.00 8.54 C ATOM 401 CB ARG 43 -5.151 76.610 25.234 1.00 8.54 C ATOM 402 CG ARG 43 -6.662 76.769 25.045 1.00 8.54 C ATOM 403 CD ARG 43 -7.393 76.974 26.372 1.00 8.54 C ATOM 404 NE ARG 43 -7.106 78.274 26.986 1.00 8.54 N ATOM 406 CZ ARG 43 -7.617 78.708 28.139 1.00 8.54 C ATOM 407 NH1 ARG 43 -7.280 79.907 28.593 1.00 8.54 N ATOM 410 NH2 ARG 43 -8.460 77.959 28.844 1.00 8.54 N ATOM 413 C ARG 43 -2.880 76.103 24.251 1.00 8.54 C ATOM 414 O ARG 43 -2.561 74.913 24.399 1.00 8.54 O ATOM 415 N SER 44 -1.972 77.085 24.387 1.00 8.86 N ATOM 417 CA SER 44 -0.572 76.660 24.574 1.00 8.86 C ATOM 418 CB SER 44 0.363 77.550 23.740 1.00 8.86 C ATOM 419 OG SER 44 0.052 77.469 22.360 1.00 8.86 O ATOM 421 C SER 44 -0.021 76.530 26.008 1.00 8.86 C ATOM 422 O SER 44 0.061 77.459 26.821 1.00 8.86 O ATOM 423 N LYS 45 0.242 75.238 26.236 1.00 7.99 N ATOM 425 CA LYS 45 0.771 74.478 27.384 1.00 7.99 C ATOM 426 CG LYS 45 -0.089 73.316 29.540 1.00 7.99 C ATOM 427 CD LYS 45 -1.251 72.536 30.132 1.00 7.99 C ATOM 428 CE LYS 45 -0.988 72.171 31.585 1.00 7.99 C ATOM 429 NZ LYS 45 -2.120 71.407 32.178 1.00 7.99 N ATOM 433 C LYS 45 1.718 73.531 26.611 1.00 7.99 C ATOM 434 O LYS 45 1.662 73.532 25.372 1.00 7.99 O ATOM 435 CB LYS 45 -0.354 73.683 28.075 1.00 7.99 C TER 2232 LEU 249 END