####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS458_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 4.93 27.94 LCS_AVERAGE: 39.20 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.80 19.24 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.37 19.85 LCS_AVERAGE: 18.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.58 20.05 LCS_AVERAGE: 14.41 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 20 3 3 4 4 7 7 9 12 12 14 16 18 19 20 20 21 22 22 23 24 LCS_GDT V 3 V 3 4 7 20 3 4 5 6 7 9 11 13 14 14 16 18 19 20 20 21 22 22 23 24 LCS_GDT Q 4 Q 4 4 7 20 3 4 5 6 7 8 11 13 14 14 16 18 19 20 20 21 22 22 23 24 LCS_GDT G 5 G 5 4 7 20 3 4 5 6 7 8 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT P 6 P 6 4 7 20 3 4 5 6 7 8 10 13 13 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT W 7 W 7 4 7 20 3 4 5 6 7 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT V 8 V 8 4 10 20 3 4 5 6 7 9 11 13 14 14 16 18 19 20 20 21 22 22 23 24 LCS_GDT G 9 G 9 9 10 20 7 8 9 9 9 9 11 13 14 14 15 16 16 19 19 20 21 22 23 25 LCS_GDT S 10 S 10 9 10 20 7 8 9 9 9 9 10 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT S 11 S 11 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT Y 12 Y 12 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT V 13 V 13 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT A 14 A 14 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT E 15 E 15 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT T 16 T 16 9 10 20 7 8 9 9 9 9 11 13 14 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT G 17 G 17 9 10 20 3 8 9 9 9 9 11 13 14 14 16 18 18 20 20 21 22 25 25 25 LCS_GDT Q 18 Q 18 4 4 20 3 3 4 5 5 6 8 9 12 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT N 19 N 19 4 11 20 3 3 4 4 7 10 11 12 13 13 16 18 19 20 20 21 22 25 25 25 LCS_GDT W 20 W 20 10 11 20 7 10 10 10 10 10 11 12 13 14 16 18 19 20 20 21 22 25 25 25 LCS_GDT A 21 A 21 10 11 20 7 10 10 10 10 10 11 12 13 13 14 16 19 20 20 21 22 25 25 25 LCS_GDT S 22 S 22 10 11 17 7 10 10 10 10 10 11 12 13 13 13 15 16 18 20 21 22 25 25 25 LCS_GDT L 23 L 23 10 11 17 7 10 10 10 10 10 11 12 13 13 14 16 19 20 20 21 22 25 25 25 LCS_GDT A 24 A 24 10 11 17 7 10 10 10 10 10 11 12 13 13 13 15 16 18 19 21 22 25 25 25 LCS_GDT A 25 A 25 10 11 17 7 10 10 10 10 10 11 12 13 13 13 15 16 18 19 21 22 25 25 25 LCS_GDT N 26 N 26 10 11 17 7 10 10 10 10 10 11 12 13 13 13 15 16 18 19 21 22 25 25 25 LCS_GDT E 27 E 27 10 11 17 5 10 10 10 10 10 11 12 13 13 13 15 16 18 18 21 22 25 25 25 LCS_GDT L 28 L 28 10 11 17 5 10 10 10 10 10 11 12 13 13 13 15 16 18 18 21 22 25 25 25 LCS_GDT R 29 R 29 10 11 17 5 10 10 10 10 10 11 12 13 13 13 15 16 18 18 21 22 25 25 25 LCS_GDT V 30 V 30 5 11 17 3 4 5 5 7 10 11 12 13 13 13 15 16 18 18 21 21 25 25 25 LCS_GDT T 31 T 31 5 7 17 3 4 5 6 6 6 7 11 13 13 13 15 16 18 18 21 22 25 25 25 LCS_GDT E 32 E 32 5 7 17 3 4 5 6 6 6 7 7 8 11 12 15 15 16 18 19 20 22 24 25 LCS_GDT R 33 R 33 5 7 16 3 4 5 6 6 7 7 10 10 10 11 12 13 15 16 19 20 22 22 24 LCS_GDT P 34 P 34 5 7 13 3 4 5 6 6 7 8 10 10 10 11 12 12 14 16 17 19 22 22 22 LCS_GDT F 35 F 35 4 6 13 3 4 5 5 6 7 8 10 10 10 11 12 12 12 12 13 14 16 17 19 LCS_GDT W 36 W 36 4 6 13 3 4 5 5 6 7 8 10 10 10 11 12 12 12 12 13 14 14 14 16 LCS_GDT I 37 I 37 4 6 13 3 4 5 5 6 6 7 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT S 38 S 38 4 6 13 3 4 5 5 6 7 8 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT S 39 S 39 3 4 13 0 3 3 4 4 6 8 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT F 40 F 40 3 4 13 3 3 3 4 4 5 8 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT I 41 I 41 3 5 13 3 3 4 4 5 7 8 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT G 42 G 42 3 5 13 3 3 3 4 5 7 8 10 10 10 11 12 12 12 12 13 13 13 14 14 LCS_GDT R 43 R 43 3 5 13 3 3 4 4 5 5 6 7 8 8 11 12 12 12 12 13 13 13 14 14 LCS_GDT S 44 S 44 3 5 13 3 3 4 4 5 5 6 7 8 8 10 12 12 12 12 13 13 13 14 14 LCS_GDT K 45 K 45 3 5 13 3 3 4 4 5 5 6 7 8 8 9 9 10 10 10 13 13 13 13 14 LCS_AVERAGE LCS_A: 24.12 ( 14.41 18.75 39.20 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 10 10 10 10 11 13 14 14 16 18 19 20 20 21 22 25 25 25 GDT PERCENT_AT 15.91 22.73 22.73 22.73 22.73 22.73 25.00 29.55 31.82 31.82 36.36 40.91 43.18 45.45 45.45 47.73 50.00 56.82 56.82 56.82 GDT RMS_LOCAL 0.22 0.58 0.58 0.58 0.58 0.58 1.37 2.76 3.09 3.09 3.76 4.22 4.74 4.90 4.90 5.26 5.57 6.67 6.67 6.67 GDT RMS_ALL_AT 30.72 20.05 20.05 20.05 20.05 20.05 19.85 32.25 32.73 32.73 30.36 29.01 26.28 26.48 26.48 25.27 24.54 18.63 18.63 18.63 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.195 0 0.351 0.436 9.769 0.000 0.000 - LGA V 3 V 3 2.972 0 0.163 0.240 5.321 17.727 11.948 5.321 LGA Q 4 Q 4 3.427 0 0.064 0.921 9.305 20.455 9.697 9.305 LGA G 5 G 5 6.668 0 0.380 0.380 7.962 0.000 0.000 - LGA P 6 P 6 7.981 0 0.185 0.240 10.052 0.000 0.000 10.052 LGA W 7 W 7 3.143 0 0.403 1.197 10.160 41.818 12.338 10.125 LGA V 8 V 8 2.410 0 0.470 0.926 5.754 34.545 22.857 5.754 LGA G 9 G 9 3.553 0 0.446 0.446 3.553 23.636 23.636 - LGA S 10 S 10 3.621 0 0.083 0.715 4.281 19.545 15.758 3.519 LGA S 11 S 11 3.437 0 0.046 0.508 4.250 20.909 17.879 3.222 LGA Y 12 Y 12 1.671 0 0.084 0.904 6.115 63.182 36.061 6.115 LGA V 13 V 13 0.945 0 0.038 0.185 2.707 73.636 58.701 2.462 LGA A 14 A 14 0.726 0 0.026 0.029 1.591 81.818 75.636 - LGA E 15 E 15 2.309 0 0.033 1.150 3.684 40.000 33.939 2.581 LGA T 16 T 16 2.854 0 0.132 1.007 5.729 27.727 27.792 1.133 LGA G 17 G 17 2.716 0 0.248 0.248 4.747 18.182 18.182 - LGA Q 18 Q 18 8.420 0 0.640 1.348 12.931 0.000 0.000 12.931 LGA N 19 N 19 10.997 0 0.078 1.084 14.056 0.000 0.000 11.126 LGA W 20 W 20 12.094 0 0.631 0.613 13.939 0.000 0.000 12.054 LGA A 21 A 21 17.241 0 0.043 0.041 19.652 0.000 0.000 - LGA S 22 S 22 20.043 0 0.032 0.061 20.525 0.000 0.000 18.608 LGA L 23 L 23 15.490 0 0.038 0.333 16.694 0.000 0.000 10.871 LGA A 24 A 24 17.146 0 0.023 0.024 20.684 0.000 0.000 - LGA A 25 A 25 23.044 0 0.039 0.038 24.855 0.000 0.000 - LGA N 26 N 26 21.787 0 0.016 0.912 23.566 0.000 0.000 23.566 LGA E 27 E 27 19.945 0 0.074 1.187 23.325 0.000 0.000 14.267 LGA L 28 L 28 26.143 0 0.220 0.783 30.514 0.000 0.000 26.930 LGA R 29 R 29 29.609 0 0.559 1.540 33.558 0.000 0.000 32.062 LGA V 30 V 30 35.387 0 0.640 0.900 37.028 0.000 0.000 36.016 LGA T 31 T 31 39.858 0 0.632 0.512 41.240 0.000 0.000 41.240 LGA E 32 E 32 42.934 0 0.638 1.197 43.763 0.000 0.000 40.948 LGA R 33 R 33 46.442 0 0.149 1.214 48.518 0.000 0.000 44.494 LGA P 34 P 34 47.907 0 0.088 0.379 50.984 0.000 0.000 49.854 LGA F 35 F 35 50.076 0 0.045 1.261 50.722 0.000 0.000 44.258 LGA W 36 W 36 53.639 0 0.087 1.141 56.286 0.000 0.000 56.286 LGA I 37 I 37 52.981 0 0.758 1.360 54.194 0.000 0.000 47.655 LGA S 38 S 38 58.038 0 0.611 0.806 61.983 0.000 0.000 61.983 LGA S 39 S 39 56.809 0 0.683 0.820 56.950 0.000 0.000 54.377 LGA F 40 F 40 54.040 0 0.646 1.329 54.898 0.000 0.000 53.503 LGA I 41 I 41 53.125 0 0.071 1.050 56.484 0.000 0.000 50.542 LGA G 42 G 42 54.503 0 0.618 0.618 54.503 0.000 0.000 - LGA R 43 R 43 52.834 0 0.166 0.969 58.503 0.000 0.000 58.241 LGA S 44 S 44 51.900 0 0.242 0.214 54.071 0.000 0.000 51.023 LGA K 45 K 45 53.332 0 0.238 0.871 53.680 0.000 0.000 50.821 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 16.274 16.080 16.983 10.981 8.282 4.571 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.76 30.682 27.205 0.455 LGA_LOCAL RMSD: 2.758 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 32.249 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 16.274 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.391620 * X + -0.062896 * Y + 0.917975 * Z + 0.130013 Y_new = 0.895282 * X + 0.204227 * Y + 0.395932 * Z + -27.479883 Z_new = -0.212378 * X + 0.976901 * Y + -0.023669 * Z + 22.656855 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.983145 0.214008 1.595021 [DEG: 113.6259 12.2617 91.3880 ] ZXZ: 1.978000 1.594468 -0.214069 [DEG: 113.3310 91.3563 -12.2652 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS458_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS458_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.76 27.205 16.27 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS458_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 4.150 38.375 8.143 1.00 10.97 N ATOM 14 CA ALA 2 5.233 38.557 9.127 1.00 10.97 C ATOM 15 CB ALA 2 5.274 37.355 10.099 1.00 10.97 C ATOM 16 C ALA 2 6.579 38.728 8.390 1.00 10.97 C ATOM 17 O ALA 2 6.811 39.778 7.779 1.00 10.97 O ATOM 18 N VAL 3 7.448 37.705 8.457 1.00 10.60 N ATOM 20 CA VAL 3 8.774 37.673 7.800 1.00 10.60 C ATOM 21 CB VAL 3 9.918 37.241 8.806 1.00 10.60 C ATOM 22 CG1 VAL 3 11.314 37.486 8.204 1.00 10.60 C ATOM 23 CG2 VAL 3 9.799 38.015 10.121 1.00 10.60 C ATOM 24 C VAL 3 8.620 36.644 6.655 1.00 10.60 C ATOM 25 O VAL 3 7.628 35.911 6.631 1.00 10.60 O ATOM 26 N GLN 4 9.578 36.608 5.718 1.00 10.47 N ATOM 28 CA GLN 4 9.535 35.688 4.566 1.00 10.47 C ATOM 29 CB GLN 4 9.626 36.466 3.249 1.00 10.47 C ATOM 30 CG GLN 4 8.548 37.524 3.031 1.00 10.47 C ATOM 31 CD GLN 4 8.722 38.274 1.725 1.00 10.47 C ATOM 32 OE1 GLN 4 8.210 37.860 0.684 1.00 10.47 O ATOM 33 NE2 GLN 4 9.449 39.386 1.772 1.00 10.47 N ATOM 36 C GLN 4 10.616 34.601 4.581 1.00 10.47 C ATOM 37 O GLN 4 11.717 34.826 5.096 1.00 10.47 O ATOM 38 N GLY 5 10.282 33.431 4.022 1.00 11.18 N ATOM 40 CA GLY 5 11.222 32.319 3.946 1.00 11.18 C ATOM 41 C GLY 5 10.718 30.934 4.340 1.00 11.18 C ATOM 42 O GLY 5 10.947 30.563 5.498 1.00 11.18 O ATOM 43 N PRO 6 10.033 30.142 3.458 1.00 12.10 N ATOM 44 CD PRO 6 9.912 28.723 3.863 1.00 12.10 C ATOM 45 CA PRO 6 9.595 30.304 2.051 1.00 12.10 C ATOM 46 CB PRO 6 9.271 28.865 1.625 1.00 12.10 C ATOM 47 CG PRO 6 8.899 28.175 2.901 1.00 12.10 C ATOM 48 C PRO 6 8.403 31.272 1.816 1.00 12.10 C ATOM 49 O PRO 6 8.485 32.167 0.966 1.00 12.10 O ATOM 50 N TRP 7 7.319 31.056 2.576 1.00 11.11 N ATOM 52 CA TRP 7 6.062 31.837 2.574 1.00 11.11 C ATOM 53 CB TRP 7 5.074 31.299 3.635 1.00 11.11 C ATOM 54 CG TRP 7 4.232 30.067 3.220 1.00 11.11 C ATOM 55 CD2 TRP 7 4.498 28.676 3.514 1.00 11.11 C ATOM 56 CE2 TRP 7 3.425 27.919 2.964 1.00 11.11 C ATOM 57 CE3 TRP 7 5.537 27.994 4.187 1.00 11.11 C ATOM 58 CD1 TRP 7 3.040 30.080 2.527 1.00 11.11 C ATOM 59 NE1 TRP 7 2.560 28.803 2.374 1.00 11.11 N ATOM 61 CZ2 TRP 7 3.355 26.508 3.064 1.00 11.11 C ATOM 62 CZ3 TRP 7 5.472 26.582 4.290 1.00 11.11 C ATOM 63 CH2 TRP 7 4.382 25.860 3.727 1.00 11.11 C ATOM 64 C TRP 7 6.232 33.358 2.735 1.00 11.11 C ATOM 65 O TRP 7 7.234 33.799 3.299 1.00 11.11 O ATOM 66 N VAL 8 5.273 34.142 2.219 1.00 11.68 N ATOM 68 CA VAL 8 5.306 35.618 2.291 1.00 11.68 C ATOM 69 CB VAL 8 4.903 36.285 0.888 1.00 11.68 C ATOM 70 CG1 VAL 8 3.506 35.838 0.401 1.00 11.68 C ATOM 71 CG2 VAL 8 5.028 37.816 0.933 1.00 11.68 C ATOM 72 C VAL 8 4.397 35.973 3.502 1.00 11.68 C ATOM 73 O VAL 8 3.325 36.588 3.400 1.00 11.68 O ATOM 74 N GLY 9 4.919 35.532 4.649 1.00 10.69 N ATOM 76 CA GLY 9 4.312 35.669 5.964 1.00 10.69 C ATOM 77 C GLY 9 4.758 34.400 6.674 1.00 10.69 C ATOM 78 O GLY 9 4.018 33.838 7.486 1.00 10.69 O ATOM 79 N SER 10 5.990 33.979 6.352 1.00 11.05 N ATOM 81 CA SER 10 6.654 32.761 6.853 1.00 11.05 C ATOM 82 CB SER 10 7.970 32.533 6.107 1.00 11.05 C ATOM 83 OG SER 10 8.506 31.247 6.379 1.00 11.05 O ATOM 85 C SER 10 6.886 32.590 8.362 1.00 11.05 C ATOM 86 O SER 10 6.796 31.459 8.847 1.00 11.05 O ATOM 87 N SER 11 7.218 33.672 9.083 1.00 10.81 N ATOM 89 CA SER 11 7.441 33.624 10.549 1.00 10.81 C ATOM 90 OG SER 11 9.314 35.046 11.128 1.00 10.81 O ATOM 92 C SER 11 6.157 33.170 11.254 1.00 10.81 C ATOM 93 O SER 11 6.208 32.455 12.260 1.00 10.81 O ATOM 94 CB SER 11 7.899 34.972 11.100 1.00 10.81 C ATOM 95 N TYR 12 5.020 33.589 10.683 1.00 9.91 N ATOM 97 CA TYR 12 3.661 33.260 11.147 1.00 9.91 C ATOM 98 CB TYR 12 2.636 34.109 10.350 1.00 9.91 C ATOM 99 CG TYR 12 1.235 34.282 10.961 1.00 9.91 C ATOM 100 CD1 TYR 12 0.188 33.376 10.658 1.00 9.91 C ATOM 101 CE1 TYR 12 -1.119 33.551 11.194 1.00 9.91 C ATOM 102 CD2 TYR 12 0.939 35.372 11.817 1.00 9.91 C ATOM 103 CE2 TYR 12 -0.364 35.553 12.358 1.00 9.91 C ATOM 104 CZ TYR 12 -1.382 34.639 12.040 1.00 9.91 C ATOM 105 OH TYR 12 -2.646 34.809 12.560 1.00 9.91 O ATOM 107 C TYR 12 3.413 31.750 10.916 1.00 9.91 C ATOM 108 O TYR 12 2.919 31.052 11.811 1.00 9.91 O ATOM 109 N VAL 13 3.821 31.269 9.730 1.00 9.96 N ATOM 111 CA VAL 13 3.701 29.864 9.276 1.00 9.96 C ATOM 112 CB VAL 13 4.031 29.736 7.727 1.00 9.96 C ATOM 113 CG1 VAL 13 3.596 28.362 7.180 1.00 9.96 C ATOM 114 CG2 VAL 13 3.328 30.833 6.929 1.00 9.96 C ATOM 115 C VAL 13 4.647 28.951 10.102 1.00 9.96 C ATOM 116 O VAL 13 4.265 27.836 10.488 1.00 9.96 O ATOM 117 N ALA 14 5.851 29.471 10.382 1.00 9.99 N ATOM 119 CA ALA 14 6.924 28.804 11.142 1.00 9.99 C ATOM 120 CB ALA 14 8.233 29.592 10.979 1.00 9.99 C ATOM 121 C ALA 14 6.575 28.626 12.633 1.00 9.99 C ATOM 122 O ALA 14 6.794 27.546 13.198 1.00 9.99 O ATOM 123 N GLU 15 6.011 29.682 13.239 1.00 9.64 N ATOM 125 CA GLU 15 5.585 29.713 14.655 1.00 9.64 C ATOM 126 CB GLU 15 5.290 31.152 15.102 1.00 9.64 C ATOM 127 CG GLU 15 6.531 31.990 15.392 1.00 9.64 C ATOM 128 CD GLU 15 6.195 33.403 15.830 1.00 9.64 C ATOM 129 OE1 GLU 15 6.041 33.630 17.049 1.00 9.64 O ATOM 130 OE2 GLU 15 6.088 34.289 14.955 1.00 9.64 O ATOM 131 C GLU 15 4.378 28.800 14.944 1.00 9.64 C ATOM 132 O GLU 15 4.374 28.083 15.952 1.00 9.64 O ATOM 133 N THR 16 3.376 28.827 14.049 1.00 9.52 N ATOM 135 CA THR 16 2.150 28.003 14.148 1.00 9.52 C ATOM 136 CB THR 16 1.046 28.493 13.149 1.00 9.52 C ATOM 137 OG1 THR 16 1.029 29.925 13.130 1.00 9.52 O ATOM 139 CG2 THR 16 -0.355 28.014 13.577 1.00 9.52 C ATOM 140 C THR 16 2.488 26.512 13.919 1.00 9.52 C ATOM 141 O THR 16 1.942 25.638 14.603 1.00 9.52 O ATOM 142 N GLY 17 3.421 26.250 12.994 1.00 9.25 N ATOM 144 CA GLY 17 3.862 24.893 12.671 1.00 9.25 C ATOM 145 C GLY 17 4.632 24.221 13.799 1.00 9.25 C ATOM 146 O GLY 17 4.381 23.051 14.110 1.00 9.25 O ATOM 147 N GLN 18 5.554 24.979 14.410 1.00 9.17 N ATOM 149 CA GLN 18 6.394 24.528 15.537 1.00 9.17 C ATOM 150 CB GLN 18 7.536 25.517 15.798 1.00 9.17 C ATOM 151 CG GLN 18 8.665 25.466 14.774 1.00 9.17 C ATOM 152 CD GLN 18 9.770 26.460 15.074 1.00 9.17 C ATOM 153 OE1 GLN 18 9.741 27.597 14.602 1.00 9.17 O ATOM 154 NE2 GLN 18 10.753 26.036 15.861 1.00 9.17 N ATOM 157 C GLN 18 5.582 24.312 16.827 1.00 9.17 C ATOM 158 O GLN 18 5.854 23.366 17.577 1.00 9.17 O ATOM 159 N ASN 19 4.585 25.182 17.056 1.00 9.10 N ATOM 161 CA ASN 19 3.686 25.136 18.229 1.00 9.10 C ATOM 162 CB ASN 19 2.862 26.438 18.315 1.00 9.10 C ATOM 163 CG ASN 19 2.457 26.798 19.747 1.00 9.10 C ATOM 164 OD1 ASN 19 1.393 26.399 20.224 1.00 9.10 O ATOM 165 ND2 ASN 19 3.301 27.568 20.427 1.00 9.10 N ATOM 168 C ASN 19 2.759 23.900 18.169 1.00 9.10 C ATOM 169 O ASN 19 2.626 23.181 19.167 1.00 9.10 O ATOM 170 N TRP 20 2.160 23.654 16.993 1.00 9.29 N ATOM 172 CA TRP 20 1.259 22.510 16.742 1.00 9.29 C ATOM 173 CB TRP 20 0.498 22.685 15.411 1.00 9.29 C ATOM 174 CG TRP 20 -0.814 23.508 15.484 1.00 9.29 C ATOM 175 CD2 TRP 20 -2.143 23.021 15.780 1.00 9.29 C ATOM 176 CE2 TRP 20 -3.026 24.134 15.693 1.00 9.29 C ATOM 177 CE3 TRP 20 -2.676 21.753 16.112 1.00 9.29 C ATOM 178 CD1 TRP 20 -0.957 24.855 15.239 1.00 9.29 C ATOM 179 NE1 TRP 20 -2.273 25.230 15.363 1.00 9.29 N ATOM 181 CZ2 TRP 20 -4.420 24.024 15.924 1.00 9.29 C ATOM 182 CZ3 TRP 20 -4.070 21.639 16.343 1.00 9.29 C ATOM 183 CH2 TRP 20 -4.921 22.775 16.247 1.00 9.29 C ATOM 184 C TRP 20 1.998 21.161 16.760 1.00 9.29 C ATOM 185 O TRP 20 1.460 20.166 17.261 1.00 9.29 O ATOM 186 N ALA 21 3.230 21.154 16.229 1.00 9.17 N ATOM 188 CA ALA 21 4.111 19.970 16.168 1.00 9.17 C ATOM 189 CB ALA 21 5.306 20.245 15.262 1.00 9.17 C ATOM 190 C ALA 21 4.592 19.551 17.568 1.00 9.17 C ATOM 191 O ALA 21 4.640 18.353 17.876 1.00 9.17 O ATOM 192 N SER 22 4.922 20.550 18.403 1.00 8.73 N ATOM 194 CA SER 22 5.388 20.364 19.792 1.00 8.73 C ATOM 195 CB SER 22 5.974 21.671 20.345 1.00 8.73 C ATOM 196 OG SER 22 5.054 22.743 20.235 1.00 8.73 O ATOM 198 C SER 22 4.282 19.831 20.724 1.00 8.73 C ATOM 199 O SER 22 4.531 18.916 21.521 1.00 8.73 O ATOM 200 N LEU 23 3.070 20.396 20.599 1.00 8.98 N ATOM 202 CA LEU 23 1.883 20.003 21.387 1.00 8.98 C ATOM 203 CB LEU 23 0.742 21.031 21.227 1.00 8.98 C ATOM 204 CG LEU 23 0.797 22.437 21.861 1.00 8.98 C ATOM 205 CD1 LEU 23 0.029 23.402 20.973 1.00 8.98 C ATOM 206 CD2 LEU 23 0.234 22.470 23.295 1.00 8.98 C ATOM 207 C LEU 23 1.379 18.597 21.015 1.00 8.98 C ATOM 208 O LEU 23 1.024 17.812 21.901 1.00 8.98 O ATOM 209 N ALA 24 1.397 18.287 19.710 1.00 9.14 N ATOM 211 CA ALA 24 0.969 16.986 19.155 1.00 9.14 C ATOM 212 CB ALA 24 0.864 17.069 17.636 1.00 9.14 C ATOM 213 C ALA 24 1.930 15.855 19.561 1.00 9.14 C ATOM 214 O ALA 24 1.481 14.770 19.942 1.00 9.14 O ATOM 215 N ALA 25 3.239 16.153 19.522 1.00 8.89 N ATOM 217 CA ALA 25 4.328 15.222 19.883 1.00 8.89 C ATOM 218 CB ALA 25 5.675 15.796 19.460 1.00 8.89 C ATOM 219 C ALA 25 4.337 14.896 21.386 1.00 8.89 C ATOM 220 O ALA 25 4.564 13.743 21.769 1.00 8.89 O ATOM 221 N ASN 26 4.093 15.924 22.214 1.00 8.59 N ATOM 223 CA ASN 26 4.036 15.824 23.687 1.00 8.59 C ATOM 224 CB ASN 26 4.048 17.234 24.313 1.00 8.59 C ATOM 225 CG ASN 26 4.677 17.266 25.708 1.00 8.59 C ATOM 226 OD1 ASN 26 5.884 17.475 25.854 1.00 8.59 O ATOM 227 ND2 ASN 26 3.854 17.076 26.735 1.00 8.59 N ATOM 230 C ASN 26 2.789 15.033 24.151 1.00 8.59 C ATOM 231 O ASN 26 2.879 14.228 25.086 1.00 8.59 O ATOM 232 N GLU 27 1.649 15.280 23.487 1.00 8.95 N ATOM 234 CA GLU 27 0.352 14.630 23.770 1.00 8.95 C ATOM 235 CG GLU 27 -1.219 16.663 23.839 1.00 8.95 C ATOM 236 CD GLU 27 -2.358 17.392 23.149 1.00 8.95 C ATOM 237 OE1 GLU 27 -3.531 17.099 23.463 1.00 8.95 O ATOM 238 OE2 GLU 27 -2.080 18.261 22.295 1.00 8.95 O ATOM 239 C GLU 27 0.250 13.133 23.421 1.00 8.95 C ATOM 240 O GLU 27 -0.350 12.370 24.185 1.00 8.95 O ATOM 241 CB GLU 27 -0.798 15.397 23.103 1.00 8.95 C ATOM 242 N LEU 28 0.834 12.729 22.281 1.00 9.21 N ATOM 244 CA LEU 28 0.822 11.327 21.806 1.00 9.21 C ATOM 245 CB LEU 28 1.212 11.234 20.306 1.00 9.21 C ATOM 246 CG LEU 28 2.525 11.693 19.626 1.00 9.21 C ATOM 247 CD1 LEU 28 3.605 10.599 19.643 1.00 9.21 C ATOM 248 CD2 LEU 28 2.214 12.071 18.187 1.00 9.21 C ATOM 249 C LEU 28 1.640 10.332 22.656 1.00 9.21 C ATOM 250 O LEU 28 1.223 9.182 22.830 1.00 9.21 O ATOM 251 N ARG 29 2.796 10.793 23.169 1.00 8.91 N ATOM 253 CA ARG 29 3.761 10.030 24.014 1.00 8.91 C ATOM 254 CB ARG 29 3.150 9.627 25.376 1.00 8.91 C ATOM 255 CG ARG 29 2.850 10.799 26.313 1.00 8.91 C ATOM 256 CD ARG 29 2.248 10.341 27.640 1.00 8.91 C ATOM 257 NE ARG 29 3.210 9.623 28.485 1.00 8.91 N ATOM 259 CZ ARG 29 2.947 9.119 29.690 1.00 8.91 C ATOM 260 NH1 ARG 29 3.904 8.489 30.358 1.00 8.91 N ATOM 263 NH2 ARG 29 1.740 9.233 30.237 1.00 8.91 N ATOM 266 C ARG 29 4.417 8.807 23.335 1.00 8.91 C ATOM 267 O ARG 29 3.895 8.302 22.334 1.00 8.91 O ATOM 268 N VAL 30 5.551 8.349 23.889 1.00 8.17 N ATOM 270 CA VAL 30 6.321 7.195 23.374 1.00 8.17 C ATOM 271 CB VAL 30 7.869 7.338 23.654 1.00 8.17 C ATOM 272 CG1 VAL 30 8.477 8.354 22.699 1.00 8.17 C ATOM 273 CG2 VAL 30 8.156 7.755 25.115 1.00 8.17 C ATOM 274 C VAL 30 5.805 5.806 23.824 1.00 8.17 C ATOM 275 O VAL 30 5.715 4.887 23.000 1.00 8.17 O ATOM 276 N THR 31 5.466 5.680 25.117 1.00 8.53 N ATOM 278 CA THR 31 4.951 4.432 25.717 1.00 8.53 C ATOM 279 CB THR 31 5.753 4.021 26.998 1.00 8.53 C ATOM 280 OG1 THR 31 5.842 5.136 27.893 1.00 8.53 O ATOM 282 CG2 THR 31 7.154 3.548 26.630 1.00 8.53 C ATOM 283 C THR 31 3.445 4.529 26.040 1.00 8.53 C ATOM 284 O THR 31 3.017 5.419 26.792 1.00 8.53 O ATOM 285 N GLU 32 2.654 3.650 25.406 1.00 7.12 N ATOM 287 CA GLU 32 1.189 3.572 25.578 1.00 7.12 C ATOM 288 CB GLU 32 0.450 4.083 24.327 1.00 7.12 C ATOM 289 CG GLU 32 0.549 5.587 24.090 1.00 7.12 C ATOM 290 CD GLU 32 -0.196 6.037 22.847 1.00 7.12 C ATOM 291 OE1 GLU 32 -1.395 6.368 22.956 1.00 7.12 O ATOM 292 OE2 GLU 32 0.420 6.060 21.760 1.00 7.12 O ATOM 293 C GLU 32 0.760 2.127 25.863 1.00 7.12 C ATOM 294 O GLU 32 -0.172 1.898 26.643 1.00 7.12 O ATOM 295 N ARG 33 1.461 1.166 25.233 1.00 5.59 N ATOM 297 CA ARG 33 1.242 -0.304 25.329 1.00 5.59 C ATOM 298 CB ARG 33 1.826 -0.893 26.636 1.00 5.59 C ATOM 299 CG ARG 33 3.347 -0.854 26.727 1.00 5.59 C ATOM 300 CD ARG 33 3.838 -1.451 28.036 1.00 5.59 C ATOM 301 NE ARG 33 5.298 -1.423 28.142 1.00 5.59 N ATOM 303 CZ ARG 33 6.001 -1.878 29.180 1.00 5.59 C ATOM 304 NH1 ARG 33 7.325 -1.798 29.158 1.00 5.59 N ATOM 307 NH2 ARG 33 5.401 -2.412 30.239 1.00 5.59 N ATOM 310 C ARG 33 -0.219 -0.796 25.102 1.00 5.59 C ATOM 311 O ARG 33 -1.076 -0.596 25.976 1.00 5.59 O ATOM 312 N PRO 34 -0.532 -1.395 23.908 1.00 4.13 N ATOM 313 CD PRO 34 0.292 -1.415 22.673 1.00 4.13 C ATOM 314 CA PRO 34 -1.895 -1.891 23.612 1.00 4.13 C ATOM 315 CB PRO 34 -1.856 -2.130 22.095 1.00 4.13 C ATOM 316 CG PRO 34 -0.406 -2.430 21.815 1.00 4.13 C ATOM 317 C PRO 34 -2.383 -3.148 24.377 1.00 4.13 C ATOM 318 O PRO 34 -1.576 -4.020 24.722 1.00 4.13 O ATOM 319 N PHE 35 -3.699 -3.208 24.630 1.00 2.90 N ATOM 321 CA PHE 35 -4.364 -4.328 25.317 1.00 2.90 C ATOM 322 CB PHE 35 -5.313 -3.823 26.428 1.00 2.90 C ATOM 323 CG PHE 35 -4.624 -3.065 27.564 1.00 2.90 C ATOM 324 CD1 PHE 35 -4.164 -3.747 28.717 1.00 2.90 C ATOM 325 CD2 PHE 35 -4.468 -1.659 27.506 1.00 2.90 C ATOM 326 CE1 PHE 35 -3.559 -3.044 29.794 1.00 2.90 C ATOM 327 CE2 PHE 35 -3.864 -0.942 28.576 1.00 2.90 C ATOM 328 CZ PHE 35 -3.408 -1.637 29.723 1.00 2.90 C ATOM 329 C PHE 35 -5.178 -5.099 24.278 1.00 2.90 C ATOM 330 O PHE 35 -5.750 -4.484 23.366 1.00 2.90 O ATOM 331 N TRP 36 -5.210 -6.431 24.402 1.00 1.23 N ATOM 333 CA TRP 36 -5.943 -7.280 23.457 1.00 1.23 C ATOM 334 CB TRP 36 -4.994 -8.194 22.642 1.00 1.23 C ATOM 335 CG TRP 36 -3.948 -7.479 21.755 1.00 1.23 C ATOM 336 CD2 TRP 36 -2.608 -7.077 22.123 1.00 1.23 C ATOM 337 CE2 TRP 36 -2.012 -6.502 20.966 1.00 1.23 C ATOM 338 CE3 TRP 36 -1.852 -7.147 23.317 1.00 1.23 C ATOM 339 CD1 TRP 36 -4.090 -7.135 20.429 1.00 1.23 C ATOM 340 NE1 TRP 36 -2.938 -6.553 19.959 1.00 1.23 N ATOM 342 CZ2 TRP 36 -0.689 -5.995 20.960 1.00 1.23 C ATOM 343 CZ3 TRP 36 -0.528 -6.641 23.316 1.00 1.23 C ATOM 344 CH2 TRP 36 0.034 -6.072 22.138 1.00 1.23 C ATOM 345 C TRP 36 -7.089 -8.138 23.976 1.00 1.23 C ATOM 346 O TRP 36 -7.069 -8.652 25.101 1.00 1.23 O ATOM 347 N ILE 37 -8.099 -8.218 23.104 1.00 1.99 N ATOM 349 CA ILE 37 -9.321 -9.028 23.192 1.00 1.99 C ATOM 350 CB ILE 37 -10.624 -8.224 22.850 1.00 1.99 C ATOM 351 CG2 ILE 37 -11.811 -9.175 22.524 1.00 1.99 C ATOM 352 CG1 ILE 37 -10.957 -7.309 24.045 1.00 1.99 C ATOM 353 CD1 ILE 37 -11.920 -6.153 23.786 1.00 1.99 C ATOM 354 C ILE 37 -8.883 -9.974 22.070 1.00 1.99 C ATOM 355 O ILE 37 -8.138 -9.535 21.177 1.00 1.99 O ATOM 356 N SER 38 -9.334 -11.231 22.059 1.00 2.54 N ATOM 358 CA SER 38 -8.801 -12.126 21.037 1.00 2.54 C ATOM 359 CB SER 38 -8.666 -13.512 21.639 1.00 2.54 C ATOM 360 OG SER 38 -7.806 -14.339 20.885 1.00 2.54 O ATOM 362 C SER 38 -9.736 -12.138 19.829 1.00 2.54 C ATOM 363 O SER 38 -10.898 -12.545 19.870 1.00 2.54 O ATOM 364 N SER 39 -9.148 -11.593 18.761 1.00 2.85 N ATOM 366 CA SER 39 -9.752 -11.353 17.455 1.00 2.85 C ATOM 367 CB SER 39 -10.214 -9.911 17.407 1.00 2.85 C ATOM 368 OG SER 39 -10.793 -9.502 18.633 1.00 2.85 O ATOM 370 C SER 39 -8.819 -11.698 16.281 1.00 2.85 C ATOM 371 O SER 39 -7.599 -11.603 16.427 1.00 2.85 O ATOM 372 N PHE 40 -9.394 -12.039 15.120 1.00 4.43 N ATOM 374 CA PHE 40 -8.651 -12.443 13.905 1.00 4.43 C ATOM 375 CB PHE 40 -9.351 -13.688 13.294 1.00 4.43 C ATOM 376 CG PHE 40 -8.539 -14.451 12.237 1.00 4.43 C ATOM 377 CD1 PHE 40 -7.730 -15.552 12.603 1.00 4.43 C ATOM 378 CD2 PHE 40 -8.633 -14.114 10.864 1.00 4.43 C ATOM 379 CE1 PHE 40 -7.029 -16.305 11.622 1.00 4.43 C ATOM 380 CE2 PHE 40 -7.937 -14.857 9.872 1.00 4.43 C ATOM 381 CZ PHE 40 -7.133 -15.956 10.254 1.00 4.43 C ATOM 382 C PHE 40 -8.563 -11.285 12.880 1.00 4.43 C ATOM 383 O PHE 40 -9.492 -10.479 12.764 1.00 4.43 O ATOM 384 N ILE 41 -7.434 -11.241 12.149 1.00 4.97 N ATOM 386 CA ILE 41 -7.093 -10.201 11.149 1.00 4.97 C ATOM 387 CB ILE 41 -5.640 -9.602 11.437 1.00 4.97 C ATOM 388 CG2 ILE 41 -4.526 -10.653 11.172 1.00 4.97 C ATOM 389 CG1 ILE 41 -5.424 -8.276 10.675 1.00 4.97 C ATOM 390 CD1 ILE 41 -4.492 -7.263 11.358 1.00 4.97 C ATOM 391 C ILE 41 -7.253 -10.695 9.686 1.00 4.97 C ATOM 392 O ILE 41 -6.993 -11.866 9.386 1.00 4.97 O ATOM 393 N GLY 42 -7.674 -9.778 8.807 1.00 6.20 N ATOM 395 CA GLY 42 -7.927 -10.100 7.408 1.00 6.20 C ATOM 396 C GLY 42 -7.285 -9.402 6.212 1.00 6.20 C ATOM 397 O GLY 42 -6.956 -8.210 6.243 1.00 6.20 O ATOM 398 N ARG 43 -7.085 -10.231 5.177 1.00 7.66 N ATOM 400 CA ARG 43 -6.566 -9.941 3.817 1.00 7.66 C ATOM 401 CB ARG 43 -5.554 -11.004 3.371 1.00 7.66 C ATOM 402 CG ARG 43 -4.235 -10.998 4.147 1.00 7.66 C ATOM 403 CD ARG 43 -3.269 -12.076 3.656 1.00 7.66 C ATOM 404 NE ARG 43 -2.740 -11.801 2.316 1.00 7.66 N ATOM 406 CZ ARG 43 -1.881 -12.577 1.655 1.00 7.66 C ATOM 407 NH1 ARG 43 -1.475 -12.219 0.445 1.00 7.66 N ATOM 410 NH2 ARG 43 -1.424 -13.708 2.187 1.00 7.66 N ATOM 413 C ARG 43 -7.915 -10.141 3.095 1.00 7.66 C ATOM 414 O ARG 43 -8.724 -10.922 3.622 1.00 7.66 O ATOM 415 N SER 44 -8.209 -9.534 1.932 1.00 7.75 N ATOM 417 CA SER 44 -9.597 -9.733 1.487 1.00 7.75 C ATOM 418 CB SER 44 -10.197 -8.380 1.068 1.00 7.75 C ATOM 419 OG SER 44 -10.193 -7.464 2.149 1.00 7.75 O ATOM 421 C SER 44 -10.056 -10.802 0.479 1.00 7.75 C ATOM 422 O SER 44 -9.662 -10.910 -0.689 1.00 7.75 O ATOM 423 N LYS 45 -10.752 -11.696 1.191 1.00 8.30 N ATOM 425 CA LYS 45 -11.545 -12.914 0.928 1.00 8.30 C ATOM 426 CG LYS 45 -9.560 -14.509 0.527 1.00 8.30 C ATOM 427 CD LYS 45 -8.877 -15.778 1.024 1.00 8.30 C ATOM 428 CE LYS 45 -7.638 -16.126 0.202 1.00 8.30 C ATOM 429 NZ LYS 45 -7.949 -16.555 -1.195 1.00 8.30 N ATOM 433 C LYS 45 -12.534 -12.481 2.033 1.00 8.30 C ATOM 434 O LYS 45 -12.164 -11.557 2.773 1.00 8.30 O ATOM 435 CB LYS 45 -10.795 -14.181 1.362 1.00 8.30 C TER 2232 LEU 249 END