####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS457_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 8 - 41 4.94 7.39 LCS_AVERAGE: 72.37 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.93 8.93 LCS_AVERAGE: 28.46 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 0.87 10.00 LCS_AVERAGE: 19.42 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 0 3 3 3 5 6 8 11 16 21 26 26 29 30 32 34 36 38 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 7 8 10 15 17 23 26 28 29 32 34 35 37 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 7 8 10 15 17 19 26 28 29 31 34 35 38 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 7 9 13 19 22 26 29 29 30 33 35 36 38 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 7 9 14 15 22 26 29 29 30 33 35 36 38 39 40 LCS_GDT W 7 W 7 5 5 33 3 5 5 5 6 7 8 10 14 17 19 26 28 30 33 34 36 38 39 40 LCS_GDT V 8 V 8 3 11 34 3 9 14 16 17 18 18 22 24 25 26 29 29 30 33 35 36 38 39 40 LCS_GDT G 9 G 9 8 11 34 3 6 8 9 11 18 18 21 24 25 26 29 29 30 33 35 36 38 39 40 LCS_GDT S 10 S 10 8 11 34 3 7 8 9 11 16 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT S 11 S 11 8 11 34 3 6 8 9 11 12 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT Y 12 Y 12 8 11 34 4 7 8 9 11 12 14 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT V 13 V 13 8 11 34 4 7 8 9 11 12 14 21 23 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT A 14 A 14 8 11 34 4 7 8 9 11 12 14 15 18 23 25 27 29 31 33 35 36 38 39 40 LCS_GDT E 15 E 15 8 11 34 3 7 8 9 11 12 14 14 15 17 23 26 28 31 32 34 36 37 39 40 LCS_GDT T 16 T 16 8 11 34 4 7 8 9 11 12 14 14 15 18 23 26 29 31 33 35 36 38 39 40 LCS_GDT G 17 G 17 8 11 34 3 7 7 9 11 12 14 14 15 17 18 22 26 30 33 35 36 38 39 40 LCS_GDT Q 18 Q 18 4 11 34 3 3 4 9 11 12 14 15 21 23 25 29 29 31 33 35 36 38 39 40 LCS_GDT N 19 N 19 4 16 34 3 3 4 4 8 16 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT W 20 W 20 14 18 34 7 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT A 21 A 21 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT S 22 S 22 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT L 23 L 23 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT A 24 A 24 14 18 34 7 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT A 25 A 25 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT N 26 N 26 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT E 27 E 27 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT L 28 L 28 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT R 29 R 29 14 18 34 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT V 30 V 30 14 18 34 7 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT T 31 T 31 14 18 34 3 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT E 32 E 32 14 18 34 3 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT R 33 R 33 14 18 34 3 11 14 15 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT P 34 P 34 5 18 34 2 4 6 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT F 35 F 35 3 18 34 3 3 3 7 8 13 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT W 36 W 36 6 18 34 3 8 13 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT I 37 I 37 7 18 34 3 5 7 7 12 14 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT S 38 S 38 7 9 34 4 5 7 7 8 8 12 18 22 24 25 27 29 31 33 35 36 38 39 40 LCS_GDT S 39 S 39 7 9 34 4 5 7 7 8 9 14 18 23 24 25 27 29 31 33 35 36 38 39 40 LCS_GDT F 40 F 40 7 9 34 4 5 7 7 8 10 18 22 24 25 26 29 29 31 33 35 36 38 39 40 LCS_GDT I 41 I 41 7 9 34 4 5 7 7 8 9 14 18 23 24 25 27 29 31 33 35 36 38 39 40 LCS_GDT G 42 G 42 7 9 33 0 3 7 7 8 9 13 16 20 24 25 27 29 31 32 34 35 37 38 39 LCS_GDT R 43 R 43 7 9 33 0 3 7 7 8 8 10 13 15 19 23 26 28 30 32 33 34 35 36 37 LCS_GDT S 44 S 44 3 4 27 0 3 3 3 5 7 8 10 13 13 14 22 23 26 29 30 30 32 33 34 LCS_GDT K 45 K 45 3 3 14 0 3 4 4 4 6 7 8 8 11 12 15 15 20 20 21 23 25 27 27 LCS_AVERAGE LCS_A: 40.08 ( 19.42 28.46 72.37 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 11 14 16 17 18 18 22 24 25 26 29 29 31 33 35 36 38 39 40 GDT PERCENT_AT 18.18 25.00 31.82 36.36 38.64 40.91 40.91 50.00 54.55 56.82 59.09 65.91 65.91 70.45 75.00 79.55 81.82 86.36 88.64 90.91 GDT RMS_LOCAL 0.40 0.59 0.87 1.24 1.34 1.52 1.52 2.55 2.83 2.92 3.13 3.85 3.81 4.46 4.66 5.00 5.10 5.44 5.57 5.79 GDT RMS_ALL_AT 9.24 9.48 10.00 9.10 9.17 9.06 9.06 8.19 7.96 8.03 7.88 7.82 7.92 7.43 7.43 7.38 7.50 7.46 7.51 7.44 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.515 0 0.033 0.048 9.630 0.000 0.000 - LGA V 3 V 3 10.345 0 0.572 0.615 12.095 0.000 0.000 12.095 LGA Q 4 Q 4 11.168 0 0.018 0.911 18.204 0.000 0.000 18.136 LGA G 5 G 5 8.165 0 0.139 0.139 10.056 0.000 0.000 - LGA P 6 P 6 7.325 0 0.686 0.601 9.311 0.000 0.000 8.637 LGA W 7 W 7 8.351 0 0.504 1.208 19.360 0.000 0.000 19.038 LGA V 8 V 8 2.044 0 0.605 1.437 4.691 29.545 19.481 4.400 LGA G 9 G 9 4.251 0 0.385 0.385 4.251 17.273 17.273 - LGA S 10 S 10 4.044 0 0.048 0.124 5.349 7.273 8.788 3.094 LGA S 11 S 11 4.778 0 0.131 0.600 6.381 3.182 2.424 4.700 LGA Y 12 Y 12 5.269 0 0.104 1.195 9.819 0.455 1.515 9.819 LGA V 13 V 13 7.198 0 0.075 1.020 10.982 0.000 0.000 9.399 LGA A 14 A 14 11.453 0 0.064 0.068 14.955 0.000 0.000 - LGA E 15 E 15 13.728 0 0.046 1.129 16.534 0.000 0.000 16.534 LGA T 16 T 16 11.401 0 0.041 0.100 12.105 0.000 0.000 7.182 LGA G 17 G 17 12.538 0 0.602 0.602 12.538 0.000 0.000 - LGA Q 18 Q 18 9.280 0 0.658 1.306 15.835 0.000 0.000 14.075 LGA N 19 N 19 4.055 0 0.090 0.980 7.452 13.636 8.182 7.452 LGA W 20 W 20 3.310 0 0.597 1.248 14.325 30.909 8.831 14.325 LGA A 21 A 21 1.675 0 0.048 0.050 2.286 55.000 57.091 - LGA S 22 S 22 1.132 0 0.026 0.630 1.801 69.545 63.333 1.801 LGA L 23 L 23 1.404 0 0.086 1.420 6.288 69.545 40.909 4.126 LGA A 24 A 24 1.601 0 0.024 0.028 2.081 58.182 54.182 - LGA A 25 A 25 1.138 0 0.031 0.032 1.624 61.818 65.818 - LGA N 26 N 26 0.959 0 0.059 0.102 1.284 73.636 75.682 1.164 LGA E 27 E 27 1.296 0 0.052 0.815 2.660 58.182 54.949 2.660 LGA L 28 L 28 1.771 0 0.054 0.101 2.261 47.727 49.318 1.794 LGA R 29 R 29 1.849 0 0.077 1.404 9.712 47.727 24.298 9.712 LGA V 30 V 30 1.935 0 0.103 1.111 2.956 62.273 48.831 2.956 LGA T 31 T 31 1.081 0 0.651 0.973 4.268 52.273 47.273 1.858 LGA E 32 E 32 1.414 0 0.101 1.455 4.522 73.636 42.424 4.522 LGA R 33 R 33 2.578 0 0.042 0.768 14.224 18.182 6.612 14.224 LGA P 34 P 34 2.511 0 0.616 0.620 5.431 18.182 17.143 3.938 LGA F 35 F 35 4.152 0 0.583 1.466 10.306 27.273 9.917 10.306 LGA W 36 W 36 1.159 0 0.609 0.530 4.039 51.364 43.896 4.039 LGA I 37 I 37 3.897 0 0.112 0.990 8.109 8.182 4.091 8.109 LGA S 38 S 38 8.305 0 0.127 0.657 11.104 0.000 0.000 11.104 LGA S 39 S 39 8.177 0 0.147 0.705 9.534 0.000 0.000 8.667 LGA F 40 F 40 5.358 0 0.110 1.286 8.389 0.000 2.479 8.029 LGA I 41 I 41 8.829 0 0.620 1.514 12.237 0.000 0.000 10.476 LGA G 42 G 42 12.524 0 0.626 0.626 15.923 0.000 0.000 - LGA R 43 R 43 14.940 0 0.619 1.100 21.504 0.000 0.000 21.504 LGA S 44 S 44 20.246 0 0.676 0.830 23.299 0.000 0.000 20.106 LGA K 45 K 45 22.223 0 0.050 0.757 24.804 0.000 0.000 22.418 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.203 7.334 8.752 21.705 17.608 9.195 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.55 47.727 42.941 0.829 LGA_LOCAL RMSD: 2.554 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.195 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.203 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.774623 * X + -0.191729 * Y + -0.602660 * Z + -4.421776 Y_new = 0.194419 * X + -0.834596 * Y + 0.515412 * Z + 42.124500 Z_new = -0.601797 * X + -0.516419 * Y + -0.609222 * Z + -13.077253 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.245906 0.645749 -2.438453 [DEG: 14.0894 36.9987 -139.7131 ] ZXZ: -2.278319 2.225876 -2.279990 [DEG: -130.5380 127.5333 -130.6338 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS457_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.55 42.941 7.20 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS457_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 4.704 40.179 14.682 1.00 8.81 N ATOM 21 CA ALA 2 3.913 41.310 15.171 1.00 8.81 C ATOM 22 C ALA 2 4.823 42.488 15.549 1.00 8.81 C ATOM 23 O ALA 2 5.955 42.260 15.983 1.00 8.81 O ATOM 24 CB ALA 2 3.076 40.884 16.354 1.00 8.81 C ATOM 30 N VAL 3 4.348 43.746 15.401 1.00 9.11 N ATOM 31 CA VAL 3 2.978 44.099 14.992 1.00 9.11 C ATOM 32 C VAL 3 2.767 44.311 13.498 1.00 9.11 C ATOM 33 O VAL 3 1.922 43.642 12.905 1.00 9.11 O ATOM 34 CB VAL 3 2.548 45.386 15.720 1.00 9.11 C ATOM 35 CG1 VAL 3 1.164 45.819 15.263 1.00 9.11 C ATOM 36 CG2 VAL 3 2.574 45.164 17.224 1.00 9.11 C ATOM 46 N GLN 4 3.504 45.220 12.869 1.00 8.66 N ATOM 47 CA GLN 4 3.248 45.427 11.447 1.00 8.66 C ATOM 48 C GLN 4 4.077 44.462 10.633 1.00 8.66 C ATOM 49 O GLN 4 5.189 44.112 11.013 1.00 8.66 O ATOM 50 CB GLN 4 3.562 46.868 11.034 1.00 8.66 C ATOM 51 CG GLN 4 2.678 47.911 11.696 1.00 8.66 C ATOM 52 CD GLN 4 1.220 47.767 11.304 1.00 8.66 C ATOM 53 OE1 GLN 4 0.881 47.751 10.117 1.00 8.66 O ATOM 54 NE2 GLN 4 0.348 47.662 12.299 1.00 8.66 N ATOM 63 N GLY 5 3.518 44.047 9.519 1.00 7.81 N ATOM 64 CA GLY 5 4.155 43.100 8.635 1.00 7.81 C ATOM 65 C GLY 5 4.656 43.704 7.338 1.00 7.81 C ATOM 66 O GLY 5 4.916 44.905 7.267 1.00 7.81 O ATOM 70 N PRO 6 4.754 42.873 6.289 1.00 7.09 N ATOM 71 CA PRO 6 4.421 41.445 6.171 1.00 7.09 C ATOM 72 C PRO 6 5.137 40.591 7.198 1.00 7.09 C ATOM 73 O PRO 6 6.244 40.923 7.611 1.00 7.09 O ATOM 74 CB PRO 6 4.864 41.122 4.752 1.00 7.09 C ATOM 75 CG PRO 6 4.733 42.440 4.003 1.00 7.09 C ATOM 76 CD PRO 6 5.145 43.489 5.008 1.00 7.09 C ATOM 84 N TRP 7 4.464 39.544 7.680 1.00 7.45 N ATOM 85 CA TRP 7 5.054 38.709 8.709 1.00 7.45 C ATOM 86 C TRP 7 5.861 37.562 8.098 1.00 7.45 C ATOM 87 O TRP 7 7.015 37.351 8.480 1.00 7.45 O ATOM 88 CB TRP 7 3.945 38.134 9.632 1.00 7.45 C ATOM 89 CG TRP 7 3.178 39.164 10.536 1.00 7.45 C ATOM 90 CD1 TRP 7 3.542 40.439 10.805 1.00 7.45 C ATOM 91 CD2 TRP 7 1.911 38.969 11.282 1.00 7.45 C ATOM 92 NE1 TRP 7 2.607 41.041 11.627 1.00 7.45 N ATOM 93 CE2 TRP 7 1.627 40.165 11.923 1.00 7.45 C ATOM 94 CE3 TRP 7 1.021 37.899 11.445 1.00 7.45 C ATOM 95 CZ2 TRP 7 0.494 40.335 12.707 1.00 7.45 C ATOM 96 CZ3 TRP 7 -0.115 38.068 12.228 1.00 7.45 C ATOM 97 CH2 TRP 7 -0.369 39.250 12.838 1.00 7.45 C ATOM 108 N VAL 8 5.271 36.842 7.140 1.00 7.10 N ATOM 109 CA VAL 8 5.927 35.640 6.598 1.00 7.10 C ATOM 110 C VAL 8 5.927 35.532 5.086 1.00 7.10 C ATOM 111 O VAL 8 5.326 36.347 4.381 1.00 7.10 O ATOM 112 CB VAL 8 5.246 34.380 7.166 1.00 7.10 C ATOM 113 CG1 VAL 8 5.394 34.330 8.678 1.00 7.10 C ATOM 114 CG2 VAL 8 3.778 34.362 6.767 1.00 7.10 C ATOM 124 N GLY 9 6.674 34.539 4.595 1.00 7.24 N ATOM 125 CA GLY 9 6.691 34.207 3.182 1.00 7.24 C ATOM 126 C GLY 9 6.064 32.830 2.896 1.00 7.24 C ATOM 127 O GLY 9 5.160 32.353 3.615 1.00 7.24 O ATOM 131 N SER 10 6.642 32.173 1.888 1.00 7.10 N ATOM 132 CA SER 10 6.160 30.924 1.299 1.00 7.10 C ATOM 133 C SER 10 6.036 29.750 2.260 1.00 7.10 C ATOM 134 O SER 10 5.149 28.911 2.092 1.00 7.10 O ATOM 135 CB SER 10 7.083 30.526 0.164 1.00 7.10 C ATOM 136 OG SER 10 8.365 30.223 0.641 1.00 7.10 O ATOM 142 N SER 11 6.830 29.744 3.333 1.00 7.38 N ATOM 143 CA SER 11 6.816 28.635 4.284 1.00 7.38 C ATOM 144 C SER 11 5.470 28.498 5.004 1.00 7.38 C ATOM 145 O SER 11 5.174 27.436 5.553 1.00 7.38 O ATOM 146 CB SER 11 7.922 28.821 5.304 1.00 7.38 C ATOM 147 OG SER 11 7.688 29.952 6.097 1.00 7.38 O ATOM 153 N TYR 12 4.649 29.553 4.988 1.00 7.46 N ATOM 154 CA TYR 12 3.346 29.469 5.636 1.00 7.46 C ATOM 155 C TYR 12 2.236 29.708 4.621 1.00 7.46 C ATOM 156 O TYR 12 1.273 28.927 4.479 1.00 7.46 O ATOM 157 CB TYR 12 3.249 30.473 6.787 1.00 7.46 C ATOM 158 CG TYR 12 4.131 30.135 7.969 1.00 7.46 C ATOM 159 CD1 TYR 12 5.393 30.701 8.076 1.00 7.46 C ATOM 160 CD2 TYR 12 3.680 29.259 8.944 1.00 7.46 C ATOM 161 CE1 TYR 12 6.200 30.393 9.154 1.00 7.46 C ATOM 162 CE2 TYR 12 4.485 28.950 10.023 1.00 7.46 C ATOM 163 CZ TYR 12 5.741 29.514 10.129 1.00 7.46 C ATOM 164 OH TYR 12 6.544 29.207 11.204 1.00 7.46 O ATOM 174 N VAL 13 2.372 30.774 3.857 1.00 7.55 N ATOM 175 CA VAL 13 1.246 31.102 3.024 1.00 7.55 C ATOM 176 C VAL 13 0.914 30.053 1.999 1.00 7.55 C ATOM 177 O VAL 13 -0.258 29.840 1.704 1.00 7.55 O ATOM 178 CB VAL 13 1.515 32.434 2.297 1.00 7.55 C ATOM 179 CG1 VAL 13 2.612 32.261 1.258 1.00 7.55 C ATOM 180 CG2 VAL 13 0.235 32.939 1.650 1.00 7.55 C ATOM 190 N ALA 14 1.919 29.309 1.531 1.00 7.63 N ATOM 191 CA ALA 14 1.692 28.343 0.477 1.00 7.63 C ATOM 192 C ALA 14 0.699 27.279 0.938 1.00 7.63 C ATOM 193 O ALA 14 -0.026 26.709 0.122 1.00 7.63 O ATOM 194 CB ALA 14 2.992 27.685 0.066 1.00 7.63 C ATOM 200 N GLU 15 0.708 26.960 2.243 1.00 7.74 N ATOM 201 CA GLU 15 -0.058 25.841 2.756 1.00 7.74 C ATOM 202 C GLU 15 -1.227 26.287 3.639 1.00 7.74 C ATOM 203 O GLU 15 -2.246 25.598 3.706 1.00 7.74 O ATOM 204 CB GLU 15 0.861 24.902 3.549 1.00 7.74 C ATOM 205 CG GLU 15 1.969 24.251 2.714 1.00 7.74 C ATOM 206 CD GLU 15 2.820 23.263 3.496 1.00 7.74 C ATOM 207 OE1 GLU 15 2.602 23.112 4.675 1.00 7.74 O ATOM 208 OE2 GLU 15 3.692 22.667 2.905 1.00 7.74 O ATOM 215 N THR 16 -1.080 27.431 4.323 1.00 7.44 N ATOM 216 CA THR 16 -2.078 27.830 5.315 1.00 7.44 C ATOM 217 C THR 16 -2.931 29.105 5.051 1.00 7.44 C ATOM 218 O THR 16 -3.981 29.267 5.688 1.00 7.44 O ATOM 219 CB THR 16 -1.372 27.997 6.673 1.00 7.44 C ATOM 220 OG1 THR 16 -0.390 29.036 6.580 1.00 7.44 O ATOM 221 CG2 THR 16 -0.692 26.698 7.084 1.00 7.44 C ATOM 229 N GLY 17 -2.519 30.015 4.166 1.00 7.71 N ATOM 230 CA GLY 17 -3.265 31.267 3.987 1.00 7.71 C ATOM 231 C GLY 17 -3.587 32.011 5.288 1.00 7.71 C ATOM 232 O GLY 17 -2.728 32.258 6.145 1.00 7.71 O ATOM 236 N GLN 18 -4.881 32.313 5.444 1.00 7.38 N ATOM 237 CA GLN 18 -5.414 33.097 6.559 1.00 7.38 C ATOM 238 C GLN 18 -5.459 32.303 7.851 1.00 7.38 C ATOM 239 O GLN 18 -5.746 32.860 8.919 1.00 7.38 O ATOM 240 CB GLN 18 -6.818 33.610 6.227 1.00 7.38 C ATOM 241 CG GLN 18 -6.859 34.621 5.095 1.00 7.38 C ATOM 242 CD GLN 18 -8.274 35.053 4.756 1.00 7.38 C ATOM 243 OE1 GLN 18 -8.981 34.378 4.003 1.00 7.38 O ATOM 244 NE2 GLN 18 -8.695 36.184 5.311 1.00 7.38 N ATOM 253 N ASN 19 -5.209 30.999 7.771 1.00 7.19 N ATOM 254 CA ASN 19 -5.266 30.198 8.976 1.00 7.19 C ATOM 255 C ASN 19 -4.072 30.543 9.842 1.00 7.19 C ATOM 256 O ASN 19 -4.213 30.763 11.044 1.00 7.19 O ATOM 257 CB ASN 19 -5.301 28.716 8.652 1.00 7.19 C ATOM 258 CG ASN 19 -6.616 28.284 8.062 1.00 7.19 C ATOM 259 OD1 ASN 19 -7.640 28.952 8.244 1.00 7.19 O ATOM 260 ND2 ASN 19 -6.606 27.180 7.360 1.00 7.19 N ATOM 267 N TRP 20 -2.884 30.602 9.231 1.00 6.89 N ATOM 268 CA TRP 20 -1.709 30.932 9.998 1.00 6.89 C ATOM 269 C TRP 20 -1.829 32.349 10.467 1.00 6.89 C ATOM 270 O TRP 20 -1.520 32.655 11.610 1.00 6.89 O ATOM 271 CB TRP 20 -0.437 30.757 9.165 1.00 6.89 C ATOM 272 CG TRP 20 0.796 31.276 9.841 1.00 6.89 C ATOM 273 CD1 TRP 20 1.621 32.261 9.387 1.00 6.89 C ATOM 274 CD2 TRP 20 1.353 30.836 11.103 1.00 6.89 C ATOM 275 NE1 TRP 20 2.648 32.464 10.276 1.00 6.89 N ATOM 276 CE2 TRP 20 2.500 31.601 11.331 1.00 6.89 C ATOM 277 CE3 TRP 20 0.977 29.869 12.043 1.00 6.89 C ATOM 278 CZ2 TRP 20 3.281 31.432 12.463 1.00 6.89 C ATOM 279 CZ3 TRP 20 1.760 29.700 13.179 1.00 6.89 C ATOM 280 CH2 TRP 20 2.883 30.462 13.383 1.00 6.89 C ATOM 291 N ALA 21 -2.292 33.225 9.574 1.00 6.74 N ATOM 292 CA ALA 21 -2.401 34.641 9.921 1.00 6.74 C ATOM 293 C ALA 21 -3.276 34.870 11.135 1.00 6.74 C ATOM 294 O ALA 21 -2.939 35.670 12.013 1.00 6.74 O ATOM 295 CB ALA 21 -2.980 35.423 8.780 1.00 6.74 C ATOM 301 N SER 22 -4.404 34.163 11.202 1.00 7.16 N ATOM 302 CA SER 22 -5.270 34.319 12.356 1.00 7.16 C ATOM 303 C SER 22 -4.622 33.718 13.597 1.00 7.16 C ATOM 304 O SER 22 -4.612 34.329 14.677 1.00 7.16 O ATOM 305 CB SER 22 -6.611 33.661 12.095 1.00 7.16 C ATOM 306 OG SER 22 -7.291 34.302 11.053 1.00 7.16 O ATOM 312 N LEU 23 -4.053 32.522 13.447 1.00 7.44 N ATOM 313 CA LEU 23 -3.450 31.861 14.586 1.00 7.44 C ATOM 314 C LEU 23 -2.318 32.687 15.152 1.00 7.44 C ATOM 315 O LEU 23 -2.274 32.938 16.354 1.00 7.44 O ATOM 316 CB LEU 23 -2.930 30.475 14.183 1.00 7.44 C ATOM 317 CG LEU 23 -2.186 29.700 15.278 1.00 7.44 C ATOM 318 CD1 LEU 23 -3.116 29.479 16.464 1.00 7.44 C ATOM 319 CD2 LEU 23 -1.693 28.374 14.716 1.00 7.44 C ATOM 331 N ALA 24 -1.436 33.158 14.275 1.00 7.07 N ATOM 332 CA ALA 24 -0.306 33.969 14.666 1.00 7.07 C ATOM 333 C ALA 24 -0.748 35.231 15.353 1.00 7.07 C ATOM 334 O ALA 24 -0.169 35.625 16.359 1.00 7.07 O ATOM 335 CB ALA 24 0.519 34.315 13.452 1.00 7.07 C ATOM 341 N ALA 25 -1.805 35.873 14.876 1.00 7.12 N ATOM 342 CA ALA 25 -2.228 37.083 15.545 1.00 7.12 C ATOM 343 C ALA 25 -2.551 36.793 17.010 1.00 7.12 C ATOM 344 O ALA 25 -2.213 37.556 17.915 1.00 7.12 O ATOM 345 CB ALA 25 -3.401 37.711 14.845 1.00 7.12 C ATOM 351 N ASN 26 -3.166 35.630 17.262 1.00 8.05 N ATOM 352 CA ASN 26 -3.478 35.288 18.639 1.00 8.05 C ATOM 353 C ASN 26 -2.211 34.939 19.437 1.00 8.05 C ATOM 354 O ASN 26 -1.983 35.487 20.518 1.00 8.05 O ATOM 355 CB ASN 26 -4.470 34.146 18.655 1.00 8.05 C ATOM 356 CG ASN 26 -5.853 34.589 18.246 1.00 8.05 C ATOM 357 OD1 ASN 26 -6.203 35.776 18.314 1.00 8.05 O ATOM 358 ND2 ASN 26 -6.651 33.651 17.808 1.00 8.05 N ATOM 365 N GLU 27 -1.345 34.095 18.871 1.00 8.75 N ATOM 366 CA GLU 27 -0.124 33.645 19.550 1.00 8.75 C ATOM 367 C GLU 27 0.845 34.787 19.824 1.00 8.75 C ATOM 368 O GLU 27 1.519 34.822 20.861 1.00 8.75 O ATOM 369 CB GLU 27 0.582 32.573 18.715 1.00 8.75 C ATOM 370 CG GLU 27 -0.143 31.235 18.670 1.00 8.75 C ATOM 371 CD GLU 27 0.640 30.170 17.954 1.00 8.75 C ATOM 372 OE1 GLU 27 1.621 30.498 17.331 1.00 8.75 O ATOM 373 OE2 GLU 27 0.256 29.027 18.028 1.00 8.75 O ATOM 380 N LEU 28 0.880 35.748 18.912 1.00 8.41 N ATOM 381 CA LEU 28 1.746 36.904 19.003 1.00 8.41 C ATOM 382 C LEU 28 1.176 37.964 19.946 1.00 8.41 C ATOM 383 O LEU 28 1.821 38.985 20.201 1.00 8.41 O ATOM 384 CB LEU 28 1.928 37.494 17.606 1.00 8.41 C ATOM 385 CG LEU 28 2.661 36.600 16.595 1.00 8.41 C ATOM 386 CD1 LEU 28 2.513 37.184 15.179 1.00 8.41 C ATOM 387 CD2 LEU 28 4.091 36.487 16.995 1.00 8.41 C ATOM 399 N ARG 29 -0.039 37.726 20.462 1.00 8.28 N ATOM 400 CA ARG 29 -0.757 38.651 21.325 1.00 8.28 C ATOM 401 C ARG 29 -0.921 40.038 20.708 1.00 8.28 C ATOM 402 O ARG 29 -0.683 41.050 21.375 1.00 8.28 O ATOM 403 CB ARG 29 -0.049 38.765 22.672 1.00 8.28 C ATOM 404 CG ARG 29 -0.397 37.666 23.690 1.00 8.28 C ATOM 405 CD ARG 29 0.193 36.316 23.336 1.00 8.28 C ATOM 406 NE ARG 29 -0.030 35.345 24.412 1.00 8.28 N ATOM 407 CZ ARG 29 0.324 34.031 24.400 1.00 8.28 C ATOM 408 NH1 ARG 29 0.933 33.486 23.365 1.00 8.28 N ATOM 409 NH2 ARG 29 0.053 33.279 25.458 1.00 8.28 N ATOM 423 N VAL 30 -1.320 40.090 19.435 1.00 7.79 N ATOM 424 CA VAL 30 -1.500 41.364 18.749 1.00 7.79 C ATOM 425 C VAL 30 -2.884 41.674 18.207 1.00 7.79 C ATOM 426 O VAL 30 -3.518 40.858 17.535 1.00 7.79 O ATOM 427 CB VAL 30 -0.508 41.431 17.572 1.00 7.79 C ATOM 428 CG1 VAL 30 -0.717 40.254 16.630 1.00 7.79 C ATOM 429 CG2 VAL 30 -0.673 42.750 16.832 1.00 7.79 C ATOM 439 N THR 31 -3.313 42.905 18.471 1.00 8.13 N ATOM 440 CA THR 31 -4.590 43.401 18.004 1.00 8.13 C ATOM 441 C THR 31 -4.348 44.326 16.822 1.00 8.13 C ATOM 442 O THR 31 -3.586 45.290 16.921 1.00 8.13 O ATOM 443 CB THR 31 -5.356 44.142 19.116 1.00 8.13 C ATOM 444 OG1 THR 31 -5.611 43.243 20.203 1.00 8.13 O ATOM 445 CG2 THR 31 -6.676 44.680 18.587 1.00 8.13 C ATOM 453 N GLU 32 -4.987 44.000 15.718 1.00 8.71 N ATOM 454 CA GLU 32 -4.918 44.707 14.443 1.00 8.71 C ATOM 455 C GLU 32 -6.152 44.320 13.642 1.00 8.71 C ATOM 456 O GLU 32 -6.810 43.328 13.947 1.00 8.71 O ATOM 457 CB GLU 32 -3.587 44.402 13.706 1.00 8.71 C ATOM 458 CG GLU 32 -3.367 45.115 12.311 1.00 8.71 C ATOM 459 CD GLU 32 -3.504 46.650 12.310 1.00 8.71 C ATOM 460 OE1 GLU 32 -4.627 47.110 12.269 1.00 8.71 O ATOM 461 OE2 GLU 32 -2.510 47.346 12.278 1.00 8.71 O ATOM 468 N ARG 33 -6.494 45.104 12.638 1.00 8.06 N ATOM 469 CA ARG 33 -7.640 44.767 11.816 1.00 8.06 C ATOM 470 C ARG 33 -7.331 43.476 11.021 1.00 8.06 C ATOM 471 O ARG 33 -6.215 43.343 10.497 1.00 8.06 O ATOM 472 CB ARG 33 -7.974 45.907 10.865 1.00 8.06 C ATOM 473 CG ARG 33 -8.418 47.194 11.540 1.00 8.06 C ATOM 474 CD ARG 33 -8.712 48.261 10.550 1.00 8.06 C ATOM 475 NE ARG 33 -9.141 49.494 11.192 1.00 8.06 N ATOM 476 CZ ARG 33 -8.308 50.443 11.662 1.00 8.06 C ATOM 477 NH1 ARG 33 -7.007 50.287 11.554 1.00 8.06 N ATOM 478 NH2 ARG 33 -8.799 51.530 12.230 1.00 8.06 N ATOM 492 N PRO 34 -8.308 42.548 10.862 1.00 7.72 N ATOM 493 CA PRO 34 -8.263 41.338 10.038 1.00 7.72 C ATOM 494 C PRO 34 -7.742 41.547 8.626 1.00 7.72 C ATOM 495 O PRO 34 -7.101 40.663 8.060 1.00 7.72 O ATOM 496 CB PRO 34 -9.732 40.908 10.018 1.00 7.72 C ATOM 497 CG PRO 34 -10.262 41.353 11.339 1.00 7.72 C ATOM 498 CD PRO 34 -9.607 42.688 11.573 1.00 7.72 C ATOM 506 N PHE 35 -8.020 42.718 8.034 1.00 7.46 N ATOM 507 CA PHE 35 -7.482 42.998 6.709 1.00 7.46 C ATOM 508 C PHE 35 -5.966 42.906 6.714 1.00 7.46 C ATOM 509 O PHE 35 -5.368 42.274 5.836 1.00 7.46 O ATOM 510 CB PHE 35 -7.886 44.343 6.122 1.00 7.46 C ATOM 511 CG PHE 35 -7.020 44.599 4.915 1.00 7.46 C ATOM 512 CD1 PHE 35 -7.202 43.942 3.720 1.00 7.46 C ATOM 513 CD2 PHE 35 -5.962 45.442 5.028 1.00 7.46 C ATOM 514 CE1 PHE 35 -6.313 44.150 2.688 1.00 7.46 C ATOM 515 CE2 PHE 35 -5.089 45.662 4.038 1.00 7.46 C ATOM 516 CZ PHE 35 -5.250 45.013 2.860 1.00 7.46 C ATOM 526 N TRP 36 -5.325 43.627 7.636 1.00 7.25 N ATOM 527 CA TRP 36 -3.875 43.669 7.639 1.00 7.25 C ATOM 528 C TRP 36 -3.344 42.354 8.151 1.00 7.25 C ATOM 529 O TRP 36 -2.382 41.818 7.605 1.00 7.25 O ATOM 530 CB TRP 36 -3.360 44.817 8.509 1.00 7.25 C ATOM 531 CG TRP 36 -3.455 46.159 7.847 1.00 7.25 C ATOM 532 CD1 TRP 36 -4.220 47.213 8.248 1.00 7.25 C ATOM 533 CD2 TRP 36 -2.756 46.599 6.657 1.00 7.25 C ATOM 534 NE1 TRP 36 -4.048 48.274 7.393 1.00 7.25 N ATOM 535 CE2 TRP 36 -3.155 47.917 6.415 1.00 7.25 C ATOM 536 CE3 TRP 36 -1.839 45.991 5.791 1.00 7.25 C ATOM 537 CZ2 TRP 36 -2.671 48.643 5.339 1.00 7.25 C ATOM 538 CZ3 TRP 36 -1.352 46.720 4.714 1.00 7.25 C ATOM 539 CH2 TRP 36 -1.757 48.013 4.494 1.00 7.25 C ATOM 550 N ILE 37 -4.022 41.753 9.115 1.00 6.89 N ATOM 551 CA ILE 37 -3.515 40.498 9.647 1.00 6.89 C ATOM 552 C ILE 37 -3.447 39.451 8.530 1.00 6.89 C ATOM 553 O ILE 37 -2.450 38.749 8.370 1.00 6.89 O ATOM 554 CB ILE 37 -4.398 39.985 10.798 1.00 6.89 C ATOM 555 CG1 ILE 37 -4.264 40.897 12.021 1.00 6.89 C ATOM 556 CG2 ILE 37 -4.030 38.554 11.154 1.00 6.89 C ATOM 557 CD1 ILE 37 -5.310 40.650 13.085 1.00 6.89 C ATOM 569 N SER 38 -4.524 39.360 7.743 1.00 6.90 N ATOM 570 CA SER 38 -4.572 38.457 6.602 1.00 6.90 C ATOM 571 C SER 38 -3.535 38.858 5.540 1.00 6.90 C ATOM 572 O SER 38 -2.823 38.024 4.998 1.00 6.90 O ATOM 573 CB SER 38 -5.963 38.459 5.998 1.00 6.90 C ATOM 574 OG SER 38 -6.902 37.940 6.900 1.00 6.90 O ATOM 580 N SER 39 -3.387 40.142 5.265 1.00 7.12 N ATOM 581 CA SER 39 -2.469 40.561 4.214 1.00 7.12 C ATOM 582 C SER 39 -1.026 40.208 4.555 1.00 7.12 C ATOM 583 O SER 39 -0.245 39.799 3.685 1.00 7.12 O ATOM 584 CB SER 39 -2.590 42.056 3.985 1.00 7.12 C ATOM 585 OG SER 39 -3.872 42.390 3.529 1.00 7.12 O ATOM 591 N PHE 40 -0.705 40.291 5.847 1.00 7.73 N ATOM 592 CA PHE 40 0.634 40.077 6.355 1.00 7.73 C ATOM 593 C PHE 40 1.158 38.635 6.188 1.00 7.73 C ATOM 594 O PHE 40 2.349 38.372 6.425 1.00 7.73 O ATOM 595 CB PHE 40 0.674 40.462 7.836 1.00 7.73 C ATOM 596 CG PHE 40 0.604 41.942 8.079 1.00 7.73 C ATOM 597 CD1 PHE 40 0.919 42.841 7.071 1.00 7.73 C ATOM 598 CD2 PHE 40 0.223 42.439 9.317 1.00 7.73 C ATOM 599 CE1 PHE 40 0.855 44.204 7.294 1.00 7.73 C ATOM 600 CE2 PHE 40 0.158 43.801 9.542 1.00 7.73 C ATOM 601 CZ PHE 40 0.474 44.683 8.529 1.00 7.73 C ATOM 611 N ILE 41 0.275 37.734 5.703 1.00 8.19 N ATOM 612 CA ILE 41 0.606 36.355 5.360 1.00 8.19 C ATOM 613 C ILE 41 1.601 36.324 4.231 1.00 8.19 C ATOM 614 O ILE 41 2.278 35.326 4.033 1.00 8.19 O ATOM 615 CB ILE 41 -0.650 35.558 4.960 1.00 8.19 C ATOM 616 CG1 ILE 41 -0.380 34.054 5.051 1.00 8.19 C ATOM 617 CG2 ILE 41 -1.096 35.939 3.556 1.00 8.19 C ATOM 618 CD1 ILE 41 -0.089 33.570 6.453 1.00 8.19 C ATOM 630 N GLY 42 1.685 37.373 3.443 1.00 8.14 N ATOM 631 CA GLY 42 2.735 37.310 2.459 1.00 8.14 C ATOM 632 C GLY 42 2.735 38.470 1.509 1.00 8.14 C ATOM 633 O GLY 42 1.706 38.889 0.982 1.00 8.14 O ATOM 637 N ARG 43 3.943 38.905 1.196 1.00 8.09 N ATOM 638 CA ARG 43 4.169 40.038 0.319 1.00 8.09 C ATOM 639 C ARG 43 3.605 39.757 -1.062 1.00 8.09 C ATOM 640 O ARG 43 3.137 40.657 -1.741 1.00 8.09 O ATOM 641 CB ARG 43 5.654 40.350 0.210 1.00 8.09 C ATOM 642 CG ARG 43 5.984 41.648 -0.510 1.00 8.09 C ATOM 643 CD ARG 43 7.431 41.973 -0.422 1.00 8.09 C ATOM 644 NE ARG 43 7.736 43.256 -1.034 1.00 8.09 N ATOM 645 CZ ARG 43 8.975 43.776 -1.143 1.00 8.09 C ATOM 646 NH1 ARG 43 10.009 43.112 -0.678 1.00 8.09 N ATOM 647 NH2 ARG 43 9.149 44.953 -1.716 1.00 8.09 N ATOM 661 N SER 44 3.630 38.490 -1.451 1.00 7.97 N ATOM 662 CA SER 44 3.222 38.042 -2.776 1.00 7.97 C ATOM 663 C SER 44 1.698 37.929 -2.947 1.00 7.97 C ATOM 664 O SER 44 1.228 37.582 -4.034 1.00 7.97 O ATOM 665 CB SER 44 3.863 36.699 -3.067 1.00 7.97 C ATOM 666 OG SER 44 3.383 35.713 -2.197 1.00 7.97 O ATOM 672 N LYS 45 0.920 38.166 -1.880 1.00 7.54 N ATOM 673 CA LYS 45 -0.541 38.055 -1.954 1.00 7.54 C ATOM 674 C LYS 45 -1.163 39.331 -2.554 1.00 7.54 C ATOM 675 O LYS 45 -0.723 40.444 -2.270 1.00 7.54 O ATOM 676 CB LYS 45 -1.126 37.780 -0.568 1.00 7.54 C ATOM 677 CG LYS 45 -2.620 37.481 -0.565 1.00 7.54 C ATOM 678 CD LYS 45 -3.105 37.107 0.828 1.00 7.54 C ATOM 679 CE LYS 45 -4.590 36.775 0.828 1.00 7.54 C ATOM 680 NZ LYS 45 -5.420 37.941 0.419 1.00 7.54 N TER END