####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS457_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.71 4.71 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 1.75 5.88 LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.71 6.74 LONGEST_CONTINUOUS_SEGMENT: 13 23 - 35 1.99 8.42 LCS_AVERAGE: 25.41 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 0.48 7.52 LCS_AVERAGE: 14.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 6 10 13 18 24 31 33 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 4 7 8 10 18 24 31 33 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 3 3 8 10 18 24 31 33 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT G 5 G 5 3 10 44 3 3 5 13 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT P 6 P 6 3 10 44 3 4 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT W 7 W 7 3 10 44 3 4 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT V 8 V 8 3 10 44 3 4 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT G 9 G 9 6 11 44 3 5 7 10 13 23 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT S 10 S 10 6 11 44 3 5 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT S 11 S 11 6 11 44 4 5 8 11 17 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT Y 12 Y 12 6 11 44 4 5 6 12 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT V 13 V 13 6 11 44 4 5 6 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT A 14 A 14 6 11 44 4 5 8 11 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT E 15 E 15 5 11 44 4 5 7 10 13 18 21 29 34 35 36 38 40 41 41 42 42 43 43 43 LCS_GDT T 16 T 16 5 11 44 4 5 7 10 13 18 28 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT G 17 G 17 5 11 44 4 5 8 11 14 23 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT Q 18 Q 18 3 11 44 3 3 4 7 11 15 19 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT N 19 N 19 3 13 44 3 4 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT W 20 W 20 11 13 44 8 11 11 11 18 21 28 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT A 21 A 21 11 13 44 4 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT S 22 S 22 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT L 23 L 23 11 13 44 8 11 11 12 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT A 24 A 24 11 13 44 8 11 11 13 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT A 25 A 25 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT N 26 N 26 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT E 27 E 27 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT L 28 L 28 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT R 29 R 29 11 13 44 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT V 30 V 30 11 13 44 5 11 11 14 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT T 31 T 31 10 13 44 3 6 10 12 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT E 32 E 32 3 13 44 3 3 3 4 7 12 16 20 28 33 35 39 40 41 41 42 42 43 43 43 LCS_GDT R 33 R 33 3 13 44 3 3 7 11 15 19 24 31 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT P 34 P 34 3 13 44 1 3 4 9 11 14 17 22 28 33 36 39 40 41 41 42 42 43 43 43 LCS_GDT F 35 F 35 3 13 44 3 4 4 13 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT W 36 W 36 5 11 44 5 5 6 11 14 23 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT I 37 I 37 5 10 44 5 5 8 11 18 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT S 38 S 38 5 10 44 5 5 10 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT S 39 S 39 6 10 44 5 6 7 13 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT F 40 F 40 6 10 44 5 6 7 9 12 20 28 31 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT I 41 I 41 6 10 44 3 6 7 13 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 LCS_GDT G 42 G 42 6 10 44 3 6 7 8 10 11 14 20 28 35 37 38 40 41 41 42 42 43 43 43 LCS_GDT R 43 R 43 6 10 44 3 6 7 9 10 11 14 17 19 21 31 34 36 40 41 42 42 43 43 43 LCS_GDT S 44 S 44 6 10 44 3 6 7 8 10 11 14 17 19 21 22 29 34 37 38 40 41 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 3 4 8 9 11 12 14 14 16 22 22 27 29 35 36 38 38 40 42 LCS_AVERAGE LCS_A: 46.56 ( 14.26 25.41 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 11 11 14 19 26 29 32 34 35 37 39 40 41 41 42 42 43 43 43 GDT PERCENT_AT 18.18 25.00 25.00 31.82 43.18 59.09 65.91 72.73 77.27 79.55 84.09 88.64 90.91 93.18 93.18 95.45 95.45 97.73 97.73 97.73 GDT RMS_LOCAL 0.25 0.48 0.48 1.38 1.85 2.26 2.46 2.70 2.85 2.94 3.14 3.41 3.50 3.67 3.67 3.93 3.93 4.25 4.25 4.25 GDT RMS_ALL_AT 7.66 7.52 7.52 5.28 5.07 5.02 5.16 5.22 5.16 5.09 4.95 4.95 5.01 4.91 4.91 4.82 4.82 4.74 4.74 4.74 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.805 0 0.295 0.297 7.303 0.000 0.000 - LGA V 3 V 3 6.002 0 0.081 1.078 6.259 0.000 0.000 5.986 LGA Q 4 Q 4 5.256 0 0.051 1.173 10.154 2.727 1.212 9.583 LGA G 5 G 5 2.501 0 0.199 0.199 3.481 28.636 28.636 - LGA P 6 P 6 2.658 0 0.111 0.133 4.395 27.273 19.481 4.395 LGA W 7 W 7 2.263 0 0.232 0.241 2.411 38.182 47.792 1.192 LGA V 8 V 8 2.702 0 0.484 1.350 5.959 30.000 21.299 3.578 LGA G 9 G 9 3.447 0 0.366 0.366 3.447 30.455 30.455 - LGA S 10 S 10 1.081 0 0.116 0.664 1.969 65.909 63.333 1.463 LGA S 11 S 11 2.385 0 0.061 0.642 5.041 42.273 30.000 5.041 LGA Y 12 Y 12 2.956 0 0.090 1.037 12.185 27.727 10.152 12.185 LGA V 13 V 13 2.669 0 0.269 1.234 5.954 45.455 31.429 5.954 LGA A 14 A 14 2.277 0 0.042 0.047 4.444 26.364 26.545 - LGA E 15 E 15 5.292 0 0.039 0.158 8.907 1.364 0.606 8.907 LGA T 16 T 16 4.132 0 0.037 0.089 5.025 8.182 10.130 2.554 LGA G 17 G 17 3.162 0 0.662 0.662 3.224 22.727 22.727 - LGA Q 18 Q 18 4.386 0 0.688 1.224 8.899 12.273 5.455 5.900 LGA N 19 N 19 1.871 0 0.485 1.017 6.159 46.364 25.909 4.490 LGA W 20 W 20 4.161 0 0.646 1.213 9.806 15.455 4.416 9.806 LGA A 21 A 21 0.830 0 0.117 0.137 1.746 74.091 75.636 - LGA S 22 S 22 1.895 0 0.024 0.634 2.818 48.182 47.576 1.005 LGA L 23 L 23 3.191 0 0.059 0.142 6.004 25.000 13.182 6.004 LGA A 24 A 24 2.750 0 0.031 0.050 2.975 32.727 31.636 - LGA A 25 A 25 1.023 0 0.051 0.049 1.328 69.545 72.000 - LGA N 26 N 26 0.895 0 0.037 0.087 3.239 81.818 59.091 2.386 LGA E 27 E 27 2.278 0 0.090 0.168 4.752 38.636 21.818 4.483 LGA L 28 L 28 2.671 0 0.112 0.141 4.767 32.727 21.591 3.954 LGA R 29 R 29 1.829 0 0.038 1.374 6.134 41.818 30.083 6.134 LGA V 30 V 30 2.597 0 0.238 1.180 3.159 38.636 32.468 3.159 LGA T 31 T 31 3.479 0 0.668 0.984 7.816 14.091 8.052 5.467 LGA E 32 E 32 7.106 0 0.345 0.895 13.570 0.000 0.000 13.570 LGA R 33 R 33 5.372 0 0.034 0.135 8.559 0.000 1.157 7.980 LGA P 34 P 34 7.131 0 0.591 0.604 8.793 0.000 0.000 8.793 LGA F 35 F 35 2.790 0 0.584 0.871 9.728 21.818 9.752 9.728 LGA W 36 W 36 3.700 0 0.633 0.499 12.401 25.909 7.403 12.401 LGA I 37 I 37 2.565 0 0.048 0.324 3.253 44.091 34.545 3.253 LGA S 38 S 38 1.014 0 0.067 0.125 2.695 55.909 50.000 2.133 LGA S 39 S 39 2.392 0 0.025 0.662 4.405 31.818 29.394 3.760 LGA F 40 F 40 4.070 0 0.136 0.824 8.839 10.909 4.463 8.839 LGA I 41 I 41 2.791 0 0.033 0.086 6.728 16.364 14.091 5.576 LGA G 42 G 42 8.660 0 0.104 0.104 11.962 0.000 0.000 - LGA R 43 R 43 11.274 0 0.115 1.069 20.423 0.000 0.000 20.423 LGA S 44 S 44 13.582 0 0.419 0.867 16.237 0.000 0.000 14.588 LGA K 45 K 45 17.180 0 0.667 0.729 22.182 0.000 0.000 22.054 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.711 4.692 6.347 26.715 21.443 11.013 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 32 2.70 56.250 51.628 1.142 LGA_LOCAL RMSD: 2.702 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.222 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.711 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.723635 * X + -0.491880 * Y + -0.484155 * Z + 32.707256 Y_new = 0.357152 * X + -0.333389 * Y + 0.872521 * Z + -25.870922 Z_new = -0.590588 * X + -0.804304 * Y + -0.065576 * Z + 97.222084 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.458477 0.631787 -1.652148 [DEG: 26.2688 36.1987 -94.6611 ] ZXZ: -2.635001 1.636419 -2.508226 [DEG: -150.9745 93.7599 -143.7108 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS457_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS457_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 32 2.70 51.628 4.71 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS457_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 9.883 41.602 11.727 1.00 10.77 N ATOM 21 CA ALA 2 10.154 42.415 10.536 1.00 10.77 C ATOM 22 C ALA 2 11.222 41.950 9.532 1.00 10.77 C ATOM 23 O ALA 2 12.397 42.224 9.737 1.00 10.77 O ATOM 24 CB ALA 2 10.092 43.912 10.886 1.00 10.77 C ATOM 30 N VAL 3 10.842 41.157 8.517 1.00 10.73 N ATOM 31 CA VAL 3 11.763 40.365 7.651 1.00 10.73 C ATOM 32 C VAL 3 11.574 40.700 6.164 1.00 10.73 C ATOM 33 O VAL 3 10.490 41.104 5.777 1.00 10.73 O ATOM 34 CB VAL 3 11.531 38.857 7.855 1.00 10.73 C ATOM 35 CG1 VAL 3 11.830 38.461 9.293 1.00 10.73 C ATOM 36 CG2 VAL 3 10.101 38.497 7.484 1.00 10.73 C ATOM 46 N GLN 4 12.592 40.601 5.303 1.00 10.20 N ATOM 47 CA GLN 4 12.425 40.709 3.838 1.00 10.20 C ATOM 48 C GLN 4 11.732 39.468 3.251 1.00 10.20 C ATOM 49 O GLN 4 11.989 38.346 3.695 1.00 10.20 O ATOM 50 CB GLN 4 13.783 40.910 3.158 1.00 10.20 C ATOM 51 CG GLN 4 13.718 40.957 1.640 1.00 10.20 C ATOM 52 CD GLN 4 12.924 42.145 1.130 1.00 10.20 C ATOM 53 OE1 GLN 4 11.693 42.101 1.055 1.00 10.20 O ATOM 54 NE2 GLN 4 13.626 43.216 0.777 1.00 10.20 N ATOM 63 N GLY 5 10.880 39.697 2.240 1.00 9.53 N ATOM 64 CA GLY 5 10.034 38.696 1.570 1.00 9.53 C ATOM 65 C GLY 5 8.565 38.730 2.037 1.00 9.53 C ATOM 66 O GLY 5 8.333 38.553 3.229 1.00 9.53 O ATOM 70 N PRO 6 7.561 38.974 1.167 1.00 7.90 N ATOM 71 CA PRO 6 6.165 39.157 1.594 1.00 7.90 C ATOM 72 C PRO 6 5.385 37.876 1.927 1.00 7.90 C ATOM 73 O PRO 6 4.188 37.957 2.176 1.00 7.90 O ATOM 74 CB PRO 6 5.493 39.945 0.465 1.00 7.90 C ATOM 75 CG PRO 6 6.220 39.467 -0.792 1.00 7.90 C ATOM 76 CD PRO 6 7.663 39.307 -0.319 1.00 7.90 C ATOM 84 N TRP 7 6.028 36.709 1.991 1.00 7.57 N ATOM 85 CA TRP 7 5.315 35.434 2.133 1.00 7.57 C ATOM 86 C TRP 7 4.657 35.411 3.512 1.00 7.57 C ATOM 87 O TRP 7 5.344 35.217 4.515 1.00 7.57 O ATOM 88 CB TRP 7 6.264 34.245 1.975 1.00 7.57 C ATOM 89 CG TRP 7 6.828 34.109 0.593 1.00 7.57 C ATOM 90 CD1 TRP 7 8.015 34.606 0.145 1.00 7.57 C ATOM 91 CD2 TRP 7 6.228 33.427 -0.535 1.00 7.57 C ATOM 92 NE1 TRP 7 8.194 34.283 -1.177 1.00 7.57 N ATOM 93 CE2 TRP 7 7.111 33.560 -1.609 1.00 7.57 C ATOM 94 CE3 TRP 7 5.030 32.723 -0.714 1.00 7.57 C ATOM 95 CZ2 TRP 7 6.838 33.017 -2.854 1.00 7.57 C ATOM 96 CZ3 TRP 7 4.757 32.177 -1.964 1.00 7.57 C ATOM 97 CH2 TRP 7 5.639 32.320 -3.005 1.00 7.57 C ATOM 108 N VAL 8 3.335 35.619 3.538 1.00 7.24 N ATOM 109 CA VAL 8 2.499 35.857 4.737 1.00 7.24 C ATOM 110 C VAL 8 2.483 34.732 5.777 1.00 7.24 C ATOM 111 O VAL 8 1.513 34.003 5.946 1.00 7.24 O ATOM 112 CB VAL 8 1.046 36.115 4.296 1.00 7.24 C ATOM 113 CG1 VAL 8 0.967 37.360 3.424 1.00 7.24 C ATOM 114 CG2 VAL 8 0.505 34.902 3.555 1.00 7.24 C ATOM 124 N GLY 9 3.590 34.648 6.516 1.00 7.57 N ATOM 125 CA GLY 9 3.851 33.749 7.638 1.00 7.57 C ATOM 126 C GLY 9 4.213 32.357 7.220 1.00 7.57 C ATOM 127 O GLY 9 4.236 31.510 8.088 1.00 7.57 O ATOM 131 N SER 10 4.517 32.141 5.945 1.00 7.52 N ATOM 132 CA SER 10 4.779 30.807 5.392 1.00 7.52 C ATOM 133 C SER 10 5.737 29.954 6.232 1.00 7.52 C ATOM 134 O SER 10 5.442 28.797 6.523 1.00 7.52 O ATOM 135 CB SER 10 5.342 30.948 3.991 1.00 7.52 C ATOM 136 OG SER 10 5.587 29.692 3.419 1.00 7.52 O ATOM 142 N SER 11 6.835 30.554 6.717 1.00 7.76 N ATOM 143 CA SER 11 7.716 29.892 7.676 1.00 7.76 C ATOM 144 C SER 11 7.495 30.324 9.138 1.00 7.76 C ATOM 145 O SER 11 7.641 29.480 10.005 1.00 7.76 O ATOM 146 CB SER 11 9.158 30.155 7.287 1.00 7.76 C ATOM 147 OG SER 11 9.457 29.578 6.045 1.00 7.76 O ATOM 153 N TYR 12 7.070 31.559 9.427 1.00 8.07 N ATOM 154 CA TYR 12 6.906 32.102 10.789 1.00 8.07 C ATOM 155 C TYR 12 6.008 31.239 11.710 1.00 8.07 C ATOM 156 O TYR 12 6.376 30.911 12.843 1.00 8.07 O ATOM 157 CB TYR 12 6.347 33.524 10.710 1.00 8.07 C ATOM 158 CG TYR 12 6.187 34.193 12.056 1.00 8.07 C ATOM 159 CD1 TYR 12 7.274 34.816 12.654 1.00 8.07 C ATOM 160 CD2 TYR 12 4.956 34.186 12.693 1.00 8.07 C ATOM 161 CE1 TYR 12 7.127 35.428 13.884 1.00 8.07 C ATOM 162 CE2 TYR 12 4.810 34.798 13.923 1.00 8.07 C ATOM 163 CZ TYR 12 5.891 35.417 14.518 1.00 8.07 C ATOM 164 OH TYR 12 5.745 36.027 15.743 1.00 8.07 O ATOM 174 N VAL 13 4.844 30.806 11.219 1.00 8.01 N ATOM 175 CA VAL 13 3.923 30.000 12.020 1.00 8.01 C ATOM 176 C VAL 13 4.155 28.496 11.904 1.00 8.01 C ATOM 177 O VAL 13 3.376 27.744 12.474 1.00 8.01 O ATOM 178 CB VAL 13 2.472 30.308 11.602 1.00 8.01 C ATOM 179 CG1 VAL 13 2.179 31.794 11.749 1.00 8.01 C ATOM 180 CG2 VAL 13 2.238 29.850 10.171 1.00 8.01 C ATOM 190 N ALA 14 5.205 28.020 11.226 1.00 8.03 N ATOM 191 CA ALA 14 5.362 26.584 11.008 1.00 8.03 C ATOM 192 C ALA 14 5.333 25.799 12.336 1.00 8.03 C ATOM 193 O ALA 14 4.823 24.675 12.382 1.00 8.03 O ATOM 194 CB ALA 14 6.628 26.323 10.183 1.00 8.03 C ATOM 200 N GLU 15 5.840 26.438 13.393 1.00 8.01 N ATOM 201 CA GLU 15 5.937 25.986 14.788 1.00 8.01 C ATOM 202 C GLU 15 4.569 25.735 15.421 1.00 8.01 C ATOM 203 O GLU 15 4.441 24.875 16.290 1.00 8.01 O ATOM 204 CB GLU 15 6.701 27.017 15.623 1.00 8.01 C ATOM 205 CG GLU 15 6.936 26.605 17.069 1.00 8.01 C ATOM 206 CD GLU 15 7.832 25.404 17.196 1.00 8.01 C ATOM 207 OE1 GLU 15 8.525 25.102 16.255 1.00 8.01 O ATOM 208 OE2 GLU 15 7.823 24.790 18.237 1.00 8.01 O ATOM 215 N THR 16 3.564 26.502 14.977 1.00 7.56 N ATOM 216 CA THR 16 2.226 26.520 15.583 1.00 7.56 C ATOM 217 C THR 16 1.140 25.952 14.663 1.00 7.56 C ATOM 218 O THR 16 0.097 25.520 15.157 1.00 7.56 O ATOM 219 CB THR 16 1.838 27.952 15.996 1.00 7.56 C ATOM 220 OG1 THR 16 1.808 28.795 14.836 1.00 7.56 O ATOM 221 CG2 THR 16 2.839 28.509 16.996 1.00 7.56 C ATOM 229 N GLY 17 1.369 25.880 13.344 1.00 7.55 N ATOM 230 CA GLY 17 0.400 25.361 12.376 1.00 7.55 C ATOM 231 C GLY 17 0.287 26.144 11.060 1.00 7.55 C ATOM 232 O GLY 17 0.865 27.205 10.861 1.00 7.55 O ATOM 236 N GLN 18 -0.544 25.625 10.150 1.00 7.81 N ATOM 237 CA GLN 18 -0.749 26.187 8.801 1.00 7.81 C ATOM 238 C GLN 18 -1.696 27.412 8.701 1.00 7.81 C ATOM 239 O GLN 18 -1.724 28.085 7.677 1.00 7.81 O ATOM 240 CB GLN 18 -1.272 25.082 7.880 1.00 7.81 C ATOM 241 CG GLN 18 -2.706 24.666 8.158 1.00 7.81 C ATOM 242 CD GLN 18 -2.816 23.725 9.343 1.00 7.81 C ATOM 243 OE1 GLN 18 -2.026 23.800 10.288 1.00 7.81 O ATOM 244 NE2 GLN 18 -3.798 22.833 9.300 1.00 7.81 N ATOM 253 N ASN 19 -2.443 27.756 9.758 1.00 7.51 N ATOM 254 CA ASN 19 -3.511 28.776 9.741 1.00 7.51 C ATOM 255 C ASN 19 -2.888 30.163 10.033 1.00 7.51 C ATOM 256 O ASN 19 -3.109 30.793 11.073 1.00 7.51 O ATOM 257 CB ASN 19 -4.603 28.442 10.741 1.00 7.51 C ATOM 258 CG ASN 19 -5.317 27.161 10.410 1.00 7.51 C ATOM 259 OD1 ASN 19 -5.624 26.890 9.243 1.00 7.51 O ATOM 260 ND2 ASN 19 -5.588 26.368 11.415 1.00 7.51 N ATOM 267 N TRP 20 -1.994 30.541 9.112 1.00 7.21 N ATOM 268 CA TRP 20 -1.083 31.687 9.172 1.00 7.21 C ATOM 269 C TRP 20 -1.672 33.024 9.632 1.00 7.21 C ATOM 270 O TRP 20 -1.007 33.804 10.310 1.00 7.21 O ATOM 271 CB TRP 20 -0.461 31.889 7.790 1.00 7.21 C ATOM 272 CG TRP 20 -1.466 32.188 6.719 1.00 7.21 C ATOM 273 CD1 TRP 20 -2.142 31.281 5.959 1.00 7.21 C ATOM 274 CD2 TRP 20 -1.918 33.492 6.282 1.00 7.21 C ATOM 275 NE1 TRP 20 -2.978 31.927 5.083 1.00 7.21 N ATOM 276 CE2 TRP 20 -2.855 33.281 5.267 1.00 7.21 C ATOM 277 CE3 TRP 20 -1.607 34.803 6.665 1.00 7.21 C ATOM 278 CZ2 TRP 20 -3.488 34.332 4.622 1.00 7.21 C ATOM 279 CZ3 TRP 20 -2.243 35.857 6.019 1.00 7.21 C ATOM 280 CH2 TRP 20 -3.160 35.627 5.025 1.00 7.21 C ATOM 291 N ALA 21 -2.900 33.318 9.214 1.00 7.34 N ATOM 292 CA ALA 21 -3.542 34.584 9.539 1.00 7.34 C ATOM 293 C ALA 21 -3.824 34.763 11.044 1.00 7.34 C ATOM 294 O ALA 21 -3.369 35.731 11.658 1.00 7.34 O ATOM 295 CB ALA 21 -4.793 34.674 8.662 1.00 7.34 C ATOM 301 N SER 22 -4.557 33.816 11.637 1.00 7.92 N ATOM 302 CA SER 22 -4.890 33.780 13.064 1.00 7.92 C ATOM 303 C SER 22 -3.663 33.489 13.934 1.00 7.92 C ATOM 304 O SER 22 -3.472 34.135 14.965 1.00 7.92 O ATOM 305 CB SER 22 -5.955 32.730 13.320 1.00 7.92 C ATOM 306 OG SER 22 -7.173 33.099 12.734 1.00 7.92 O ATOM 312 N LEU 23 -2.800 32.554 13.504 1.00 8.09 N ATOM 313 CA LEU 23 -1.617 32.164 14.275 1.00 8.09 C ATOM 314 C LEU 23 -0.614 33.312 14.433 1.00 8.09 C ATOM 315 O LEU 23 -0.132 33.531 15.540 1.00 8.09 O ATOM 316 CB LEU 23 -0.925 30.973 13.599 1.00 8.09 C ATOM 317 CG LEU 23 -1.700 29.649 13.631 1.00 8.09 C ATOM 318 CD1 LEU 23 -0.983 28.620 12.768 1.00 8.09 C ATOM 319 CD2 LEU 23 -1.821 29.166 15.069 1.00 8.09 C ATOM 331 N ALA 24 -0.363 34.068 13.360 1.00 8.10 N ATOM 332 CA ALA 24 0.444 35.281 13.412 1.00 8.10 C ATOM 333 C ALA 24 -0.206 36.354 14.311 1.00 8.10 C ATOM 334 O ALA 24 0.469 36.957 15.137 1.00 8.10 O ATOM 335 CB ALA 24 0.662 35.768 11.982 1.00 8.10 C ATOM 341 N ALA 25 -1.524 36.570 14.218 1.00 8.18 N ATOM 342 CA ALA 25 -2.223 37.497 15.114 1.00 8.18 C ATOM 343 C ALA 25 -2.144 37.093 16.595 1.00 8.18 C ATOM 344 O ALA 25 -1.981 37.942 17.485 1.00 8.18 O ATOM 345 CB ALA 25 -3.677 37.632 14.635 1.00 8.18 C ATOM 351 N ASN 26 -2.220 35.781 16.831 1.00 9.03 N ATOM 352 CA ASN 26 -2.099 35.242 18.173 1.00 9.03 C ATOM 353 C ASN 26 -0.724 35.528 18.802 1.00 9.03 C ATOM 354 O ASN 26 -0.692 35.934 19.964 1.00 9.03 O ATOM 355 CB ASN 26 -2.380 33.750 18.154 1.00 9.03 C ATOM 356 CG ASN 26 -3.839 33.439 17.973 1.00 9.03 C ATOM 357 OD1 ASN 26 -4.703 34.292 18.208 1.00 9.03 O ATOM 358 ND2 ASN 26 -4.131 32.233 17.557 1.00 9.03 N ATOM 365 N GLU 27 0.373 35.356 18.052 1.00 9.03 N ATOM 366 CA GLU 27 1.751 35.735 18.425 1.00 9.03 C ATOM 367 C GLU 27 1.938 37.247 18.557 1.00 9.03 C ATOM 368 O GLU 27 2.574 37.684 19.515 1.00 9.03 O ATOM 369 CB GLU 27 2.743 35.191 17.395 1.00 9.03 C ATOM 370 CG GLU 27 2.889 33.675 17.401 1.00 9.03 C ATOM 371 CD GLU 27 3.483 33.150 18.678 1.00 9.03 C ATOM 372 OE1 GLU 27 4.510 33.643 19.080 1.00 9.03 O ATOM 373 OE2 GLU 27 2.908 32.257 19.253 1.00 9.03 O ATOM 380 N LEU 28 1.294 38.045 17.692 1.00 8.66 N ATOM 381 CA LEU 28 1.319 39.508 17.793 1.00 8.66 C ATOM 382 C LEU 28 0.420 40.035 18.932 1.00 8.66 C ATOM 383 O LEU 28 0.534 41.191 19.340 1.00 8.66 O ATOM 384 CB LEU 28 0.876 40.126 16.461 1.00 8.66 C ATOM 385 CG LEU 28 1.816 39.889 15.273 1.00 8.66 C ATOM 386 CD1 LEU 28 1.140 40.351 13.990 1.00 8.66 C ATOM 387 CD2 LEU 28 3.122 40.636 15.503 1.00 8.66 C ATOM 399 N ARG 29 -0.509 39.200 19.425 1.00 9.59 N ATOM 400 CA ARG 29 -1.575 39.581 20.347 1.00 9.59 C ATOM 401 C ARG 29 -2.498 40.652 19.757 1.00 9.59 C ATOM 402 O ARG 29 -2.947 41.564 20.454 1.00 9.59 O ATOM 403 CB ARG 29 -0.984 40.093 21.652 1.00 9.59 C ATOM 404 CG ARG 29 -0.608 39.011 22.652 1.00 9.59 C ATOM 405 CD ARG 29 0.637 38.304 22.254 1.00 9.59 C ATOM 406 NE ARG 29 1.092 37.386 23.286 1.00 9.59 N ATOM 407 CZ ARG 29 2.138 36.547 23.157 1.00 9.59 C ATOM 408 NH1 ARG 29 2.825 36.522 22.036 1.00 9.59 N ATOM 409 NH2 ARG 29 2.474 35.749 24.155 1.00 9.59 N ATOM 423 N VAL 30 -2.903 40.452 18.494 1.00 10.03 N ATOM 424 CA VAL 30 -3.752 41.490 17.895 1.00 10.03 C ATOM 425 C VAL 30 -4.990 40.794 17.294 1.00 10.03 C ATOM 426 O VAL 30 -5.084 39.564 17.264 1.00 10.03 O ATOM 427 CB VAL 30 -2.992 42.268 16.803 1.00 10.03 C ATOM 428 CG1 VAL 30 -1.768 42.954 17.392 1.00 10.03 C ATOM 429 CG2 VAL 30 -2.593 41.324 15.679 1.00 10.03 C ATOM 439 N THR 31 -5.987 41.544 16.824 1.00 10.91 N ATOM 440 CA THR 31 -7.142 40.920 16.151 1.00 10.91 C ATOM 441 C THR 31 -6.696 40.115 14.920 1.00 10.91 C ATOM 442 O THR 31 -5.913 40.623 14.121 1.00 10.91 O ATOM 443 CB THR 31 -8.177 41.978 15.728 1.00 10.91 C ATOM 444 OG1 THR 31 -8.647 42.680 16.887 1.00 10.91 O ATOM 445 CG2 THR 31 -9.356 41.321 15.027 1.00 10.91 C ATOM 453 N GLU 32 -7.280 38.924 14.734 1.00 12.01 N ATOM 454 CA GLU 32 -7.097 37.869 13.709 1.00 12.01 C ATOM 455 C GLU 32 -7.527 38.250 12.259 1.00 12.01 C ATOM 456 O GLU 32 -8.550 37.801 11.736 1.00 12.01 O ATOM 457 CB GLU 32 -7.869 36.620 14.141 1.00 12.01 C ATOM 458 CG GLU 32 -7.372 35.990 15.435 1.00 12.01 C ATOM 459 CD GLU 32 -8.134 34.751 15.813 1.00 12.01 C ATOM 460 OE1 GLU 32 -8.605 34.075 14.931 1.00 12.01 O ATOM 461 OE2 GLU 32 -8.244 34.480 16.985 1.00 12.01 O ATOM 468 N ARG 33 -6.807 39.159 11.607 1.00 11.88 N ATOM 469 CA ARG 33 -7.012 39.661 10.251 1.00 11.88 C ATOM 470 C ARG 33 -5.639 39.659 9.540 1.00 11.88 C ATOM 471 O ARG 33 -4.613 40.098 10.091 1.00 11.88 O ATOM 472 CB ARG 33 -7.605 41.061 10.262 1.00 11.88 C ATOM 473 CG ARG 33 -8.992 41.163 10.876 1.00 11.88 C ATOM 474 CD ARG 33 -10.019 40.507 10.027 1.00 11.88 C ATOM 475 NE ARG 33 -11.358 40.667 10.573 1.00 11.88 N ATOM 476 CZ ARG 33 -11.917 39.845 11.482 1.00 11.88 C ATOM 477 NH1 ARG 33 -11.243 38.811 11.937 1.00 11.88 N ATOM 478 NH2 ARG 33 -13.143 40.076 11.917 1.00 11.88 N ATOM 492 N PRO 34 -5.589 39.190 8.280 1.00 11.50 N ATOM 493 CA PRO 34 -4.360 39.257 7.492 1.00 11.50 C ATOM 494 C PRO 34 -3.699 40.645 7.546 1.00 11.50 C ATOM 495 O PRO 34 -2.478 40.731 7.606 1.00 11.50 O ATOM 496 CB PRO 34 -4.853 38.923 6.080 1.00 11.50 C ATOM 497 CG PRO 34 -6.002 38.001 6.304 1.00 11.50 C ATOM 498 CD PRO 34 -6.704 38.562 7.511 1.00 11.50 C ATOM 506 N PHE 35 -4.483 41.734 7.607 1.00 11.58 N ATOM 507 CA PHE 35 -3.984 43.108 7.738 1.00 11.58 C ATOM 508 C PHE 35 -2.680 43.226 8.567 1.00 11.58 C ATOM 509 O PHE 35 -1.711 43.849 8.132 1.00 11.58 O ATOM 510 CB PHE 35 -5.065 43.984 8.373 1.00 11.58 C ATOM 511 CG PHE 35 -4.581 45.348 8.776 1.00 11.58 C ATOM 512 CD1 PHE 35 -4.488 46.370 7.843 1.00 11.58 C ATOM 513 CD2 PHE 35 -4.217 45.612 10.088 1.00 11.58 C ATOM 514 CE1 PHE 35 -4.042 47.625 8.213 1.00 11.58 C ATOM 515 CE2 PHE 35 -3.773 46.865 10.461 1.00 11.58 C ATOM 516 CZ PHE 35 -3.686 47.873 9.521 1.00 11.58 C ATOM 526 N TRP 36 -2.608 42.578 9.737 1.00 11.78 N ATOM 527 CA TRP 36 -1.506 42.750 10.690 1.00 11.78 C ATOM 528 C TRP 36 -0.243 42.036 10.213 1.00 11.78 C ATOM 529 O TRP 36 0.861 42.567 10.394 1.00 11.78 O ATOM 530 CB TRP 36 -1.903 42.217 12.068 1.00 11.78 C ATOM 531 CG TRP 36 -2.899 43.082 12.780 1.00 11.78 C ATOM 532 CD1 TRP 36 -4.236 42.853 12.907 1.00 11.78 C ATOM 533 CD2 TRP 36 -2.638 44.327 13.472 1.00 11.78 C ATOM 534 NE1 TRP 36 -4.825 43.864 13.625 1.00 11.78 N ATOM 535 CE2 TRP 36 -3.861 44.775 13.981 1.00 11.78 C ATOM 536 CE3 TRP 36 -1.484 45.087 13.698 1.00 11.78 C ATOM 537 CZ2 TRP 36 -3.968 45.952 14.703 1.00 11.78 C ATOM 538 CZ3 TRP 36 -1.591 46.267 14.425 1.00 11.78 C ATOM 539 CH2 TRP 36 -2.802 46.687 14.914 1.00 11.78 C ATOM 550 N ILE 37 -0.380 40.887 9.529 1.00 12.65 N ATOM 551 CA ILE 37 0.861 40.176 9.124 1.00 12.65 C ATOM 552 C ILE 37 1.644 40.951 8.047 1.00 12.65 C ATOM 553 O ILE 37 2.870 40.904 8.027 1.00 12.65 O ATOM 554 CB ILE 37 0.537 38.766 8.596 1.00 12.65 C ATOM 555 CG1 ILE 37 1.745 37.841 8.768 1.00 12.65 C ATOM 556 CG2 ILE 37 0.113 38.829 7.137 1.00 12.65 C ATOM 557 CD1 ILE 37 1.431 36.379 8.544 1.00 12.65 C ATOM 569 N SER 38 0.961 41.740 7.216 1.00 12.96 N ATOM 570 CA SER 38 1.548 42.566 6.146 1.00 12.96 C ATOM 571 C SER 38 2.372 43.772 6.650 1.00 12.96 C ATOM 572 O SER 38 3.076 44.440 5.885 1.00 12.96 O ATOM 573 CB SER 38 0.441 43.067 5.240 1.00 12.96 C ATOM 574 OG SER 38 -0.316 44.061 5.873 1.00 12.96 O ATOM 580 N SER 39 2.262 44.112 7.935 1.00 13.28 N ATOM 581 CA SER 39 2.967 45.237 8.549 1.00 13.28 C ATOM 582 C SER 39 4.367 44.810 9.021 1.00 13.28 C ATOM 583 O SER 39 5.194 45.647 9.405 1.00 13.28 O ATOM 584 CB SER 39 2.166 45.780 9.715 1.00 13.28 C ATOM 585 OG SER 39 0.961 46.347 9.278 1.00 13.28 O ATOM 591 N PHE 40 4.650 43.503 8.979 1.00 13.19 N ATOM 592 CA PHE 40 5.926 42.986 9.485 1.00 13.19 C ATOM 593 C PHE 40 6.657 42.136 8.419 1.00 13.19 C ATOM 594 O PHE 40 7.812 42.409 8.055 1.00 13.19 O ATOM 595 CB PHE 40 5.694 42.149 10.745 1.00 13.19 C ATOM 596 CG PHE 40 4.967 42.884 11.835 1.00 13.19 C ATOM 597 CD1 PHE 40 3.604 42.705 12.022 1.00 13.19 C ATOM 598 CD2 PHE 40 5.643 43.755 12.675 1.00 13.19 C ATOM 599 CE1 PHE 40 2.934 43.381 13.024 1.00 13.19 C ATOM 600 CE2 PHE 40 4.976 44.430 13.679 1.00 13.19 C ATOM 601 CZ PHE 40 3.620 44.243 13.852 1.00 13.19 C ATOM 611 N ILE 41 5.949 41.213 7.773 1.00 12.52 N ATOM 612 CA ILE 41 6.637 40.313 6.855 1.00 12.52 C ATOM 613 C ILE 41 6.596 40.947 5.460 1.00 12.52 C ATOM 614 O ILE 41 5.538 41.204 4.890 1.00 12.52 O ATOM 615 CB ILE 41 5.988 38.917 6.831 1.00 12.52 C ATOM 616 CG1 ILE 41 6.099 38.255 8.207 1.00 12.52 C ATOM 617 CG2 ILE 41 6.635 38.048 5.765 1.00 12.52 C ATOM 618 CD1 ILE 41 5.418 36.907 8.292 1.00 12.52 C ATOM 630 N GLY 42 7.766 41.261 4.938 1.00 13.11 N ATOM 631 CA GLY 42 7.959 42.027 3.730 1.00 13.11 C ATOM 632 C GLY 42 8.877 43.228 3.909 1.00 13.11 C ATOM 633 O GLY 42 9.434 43.634 2.890 1.00 13.11 O ATOM 637 N ARG 43 9.088 43.783 5.125 1.00 12.62 N ATOM 638 CA ARG 43 10.026 44.920 5.278 1.00 12.62 C ATOM 639 C ARG 43 10.846 44.823 6.569 1.00 12.62 C ATOM 640 O ARG 43 10.262 44.707 7.633 1.00 12.62 O ATOM 641 CB ARG 43 9.268 46.240 5.273 1.00 12.62 C ATOM 642 CG ARG 43 8.635 46.609 3.940 1.00 12.62 C ATOM 643 CD ARG 43 9.659 46.967 2.925 1.00 12.62 C ATOM 644 NE ARG 43 9.056 47.431 1.687 1.00 12.62 N ATOM 645 CZ ARG 43 8.632 46.626 0.694 1.00 12.62 C ATOM 646 NH1 ARG 43 8.752 45.321 0.808 1.00 12.62 N ATOM 647 NH2 ARG 43 8.096 47.146 -0.397 1.00 12.62 N ATOM 661 N SER 44 12.173 44.939 6.453 1.00 11.72 N ATOM 662 CA SER 44 13.241 44.882 7.486 1.00 11.72 C ATOM 663 C SER 44 13.293 46.103 8.459 1.00 11.72 C ATOM 664 O SER 44 14.289 46.822 8.475 1.00 11.72 O ATOM 665 CB SER 44 14.583 44.746 6.795 1.00 11.72 C ATOM 666 OG SER 44 14.878 45.888 6.039 1.00 11.72 O ATOM 672 N LYS 45 12.203 46.417 9.180 1.00 9.24 N ATOM 673 CA LYS 45 12.066 47.558 10.129 1.00 9.24 C ATOM 674 C LYS 45 12.960 47.574 11.377 1.00 9.24 C ATOM 675 O LYS 45 13.365 48.634 11.844 1.00 9.24 O ATOM 676 CB LYS 45 10.611 47.645 10.590 1.00 9.24 C ATOM 677 CG LYS 45 9.634 48.087 9.509 1.00 9.24 C ATOM 678 CD LYS 45 8.197 48.031 10.007 1.00 9.24 C ATOM 679 CE LYS 45 7.227 48.552 8.957 1.00 9.24 C ATOM 680 NZ LYS 45 5.809 48.363 9.367 1.00 9.24 N TER END