####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS431_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 10 - 42 4.94 10.73 LCS_AVERAGE: 66.84 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.76 13.63 LONGEST_CONTINUOUS_SEGMENT: 9 21 - 29 1.96 12.24 LCS_AVERAGE: 14.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.67 15.98 LCS_AVERAGE: 9.97 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 9 3 4 5 6 6 6 6 6 7 8 11 13 15 15 16 16 16 16 17 18 LCS_GDT V 3 V 3 5 6 9 3 4 5 6 6 6 6 6 7 9 11 13 15 15 16 16 16 16 17 18 LCS_GDT Q 4 Q 4 5 6 13 3 4 5 6 6 6 6 6 6 8 10 13 15 15 16 20 22 24 27 30 LCS_GDT G 5 G 5 5 6 13 3 4 5 6 6 6 7 8 9 12 14 17 21 24 25 27 29 30 31 32 LCS_GDT P 6 P 6 5 6 13 3 4 5 6 6 6 7 10 11 15 18 21 22 24 25 27 29 31 32 35 LCS_GDT W 7 W 7 4 6 27 3 4 4 6 6 6 10 12 14 18 19 23 24 24 26 30 32 34 36 37 LCS_GDT V 8 V 8 3 5 29 3 3 4 5 8 9 13 16 19 22 23 23 25 28 30 33 35 35 36 37 LCS_GDT G 9 G 9 3 5 29 3 3 4 5 5 11 13 17 21 22 23 26 28 31 33 34 35 35 36 37 LCS_GDT S 10 S 10 3 5 33 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT S 11 S 11 4 5 33 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT Y 12 Y 12 4 5 33 3 4 4 5 5 6 10 13 18 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT V 13 V 13 4 5 33 3 4 4 5 5 7 12 15 18 21 27 29 29 31 33 34 35 35 36 37 LCS_GDT A 14 A 14 4 6 33 3 4 4 5 11 12 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT E 15 E 15 3 6 33 3 4 4 5 9 10 13 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT T 16 T 16 4 6 33 4 4 5 5 5 6 9 10 12 16 19 22 27 30 33 34 35 35 36 37 LCS_GDT G 17 G 17 4 6 33 4 4 5 5 7 9 11 14 17 24 26 29 29 31 33 34 35 35 36 37 LCS_GDT Q 18 Q 18 4 6 33 4 4 5 6 9 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT N 19 N 19 4 8 33 4 4 5 9 11 13 15 19 21 22 27 29 29 31 33 34 35 35 36 37 LCS_GDT W 20 W 20 7 9 33 5 6 7 8 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT A 21 A 21 7 9 33 5 6 7 8 9 12 15 18 21 22 23 26 28 31 33 34 35 35 36 37 LCS_GDT S 22 S 22 7 9 33 5 6 7 8 9 11 14 17 21 22 23 24 28 31 33 34 35 35 36 37 LCS_GDT L 23 L 23 7 9 33 5 6 7 8 9 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT A 24 A 24 7 9 33 5 6 7 8 9 12 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT A 25 A 25 7 9 33 3 6 7 8 9 11 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT N 26 N 26 7 9 33 3 6 7 8 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT E 27 E 27 5 9 33 3 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT L 28 L 28 5 9 33 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT R 29 R 29 5 9 33 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT V 30 V 30 5 8 33 5 7 8 9 11 13 15 19 21 22 26 29 29 31 33 34 35 35 36 37 LCS_GDT T 31 T 31 5 8 33 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT E 32 E 32 3 5 33 3 4 5 8 8 11 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT R 33 R 33 3 5 33 3 3 3 4 9 10 11 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT P 34 P 34 3 5 33 1 3 3 4 9 10 12 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT F 35 F 35 3 5 33 3 3 3 4 9 10 12 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT W 36 W 36 3 4 33 3 3 3 4 5 7 12 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT I 37 I 37 3 4 33 3 3 5 8 8 8 8 13 14 17 22 24 27 30 31 33 35 35 35 37 LCS_GDT S 38 S 38 3 4 33 3 3 3 4 5 8 10 15 18 23 27 29 29 31 33 34 35 35 36 37 LCS_GDT S 39 S 39 3 4 33 3 3 4 8 8 9 12 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT F 40 F 40 3 4 33 3 3 3 4 5 7 12 15 18 21 27 29 29 31 33 34 35 35 36 37 LCS_GDT I 41 I 41 3 5 33 3 3 4 5 7 8 12 15 19 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT G 42 G 42 4 5 33 3 3 4 8 8 10 15 19 21 24 27 29 29 31 33 34 35 35 36 37 LCS_GDT R 43 R 43 4 5 22 3 3 8 9 11 13 15 19 21 22 24 26 28 31 33 34 35 35 36 37 LCS_GDT S 44 S 44 4 5 22 3 3 4 8 9 11 14 17 20 22 23 23 25 27 29 31 35 35 36 37 LCS_GDT K 45 K 45 4 5 19 3 3 4 5 5 7 8 10 11 13 14 17 21 24 25 27 29 30 31 33 LCS_AVERAGE LCS_A: 30.34 ( 9.97 14.20 66.84 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 8 9 11 13 15 19 21 24 27 29 29 31 33 34 35 35 36 37 GDT PERCENT_AT 11.36 15.91 18.18 20.45 25.00 29.55 34.09 43.18 47.73 54.55 61.36 65.91 65.91 70.45 75.00 77.27 79.55 79.55 81.82 84.09 GDT RMS_LOCAL 0.31 0.59 0.75 1.14 1.55 1.96 2.20 2.89 3.07 3.98 4.22 4.35 4.35 4.66 4.91 5.03 5.20 5.20 5.48 5.65 GDT RMS_ALL_AT 10.83 10.82 10.75 10.55 10.57 10.50 10.49 10.14 10.14 10.65 10.84 10.81 10.81 10.60 10.44 10.43 10.51 10.51 10.19 10.26 # Checking swapping # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 28.821 0 0.067 0.085 31.056 0.000 0.000 - LGA V 3 V 3 23.875 0 0.064 1.082 25.698 0.000 0.000 22.956 LGA Q 4 Q 4 22.965 0 0.161 0.919 30.564 0.000 0.000 27.254 LGA G 5 G 5 19.387 0 0.072 0.072 21.037 0.000 0.000 - LGA P 6 P 6 16.580 0 0.675 0.556 18.456 0.000 0.000 16.645 LGA W 7 W 7 12.531 0 0.377 1.152 19.682 0.000 0.000 18.376 LGA V 8 V 8 7.954 0 0.624 0.607 9.747 0.000 0.000 7.289 LGA G 9 G 9 5.574 0 0.089 0.089 5.814 1.364 1.364 - LGA S 10 S 10 1.639 0 0.648 0.845 2.949 45.455 45.152 2.409 LGA S 11 S 11 0.374 0 0.606 0.569 3.181 52.727 46.061 2.538 LGA Y 12 Y 12 6.425 0 0.080 1.137 16.573 1.364 0.455 16.573 LGA V 13 V 13 7.520 0 0.123 1.080 11.998 0.000 0.000 11.998 LGA A 14 A 14 3.159 0 0.580 0.575 4.907 33.182 26.909 - LGA E 15 E 15 4.497 0 0.619 0.952 10.011 10.909 4.848 10.011 LGA T 16 T 16 8.453 0 0.673 1.064 12.225 0.000 0.000 9.756 LGA G 17 G 17 6.933 0 0.024 0.024 7.196 0.000 0.000 - LGA Q 18 Q 18 3.088 0 0.083 0.717 5.191 28.182 14.747 4.480 LGA N 19 N 19 1.778 0 0.646 1.241 6.214 48.636 26.818 5.972 LGA W 20 W 20 2.114 0 0.612 1.272 12.389 55.000 16.494 12.389 LGA A 21 A 21 4.359 0 0.037 0.041 6.518 10.000 8.000 - LGA S 22 S 22 5.892 0 0.056 0.083 7.737 1.364 0.909 7.290 LGA L 23 L 23 3.791 0 0.048 0.163 9.053 21.818 10.909 8.221 LGA A 24 A 24 3.238 0 0.025 0.034 4.447 24.545 20.727 - LGA A 25 A 25 3.719 0 0.125 0.123 4.661 16.818 13.818 - LGA N 26 N 26 2.352 0 0.057 0.401 5.267 44.545 26.591 5.267 LGA E 27 E 27 1.880 0 0.120 0.196 3.860 45.000 34.343 3.860 LGA L 28 L 28 1.907 0 0.120 0.147 2.714 45.455 50.000 1.864 LGA R 29 R 29 2.551 0 0.025 1.696 6.717 30.000 16.860 6.677 LGA V 30 V 30 2.757 0 0.637 0.596 3.993 23.182 23.636 3.006 LGA T 31 T 31 2.503 0 0.032 0.149 6.261 59.091 34.805 4.976 LGA E 32 E 32 3.775 0 0.661 1.161 8.006 15.455 6.869 8.006 LGA R 33 R 33 9.312 0 0.088 1.249 14.282 0.000 0.000 14.282 LGA P 34 P 34 10.335 0 0.051 0.056 12.061 0.000 0.000 12.061 LGA F 35 F 35 9.069 0 0.667 0.450 14.464 0.000 0.000 14.464 LGA W 36 W 36 11.497 0 0.662 1.224 16.193 0.000 0.000 15.351 LGA I 37 I 37 13.730 0 0.076 0.397 19.056 0.000 0.000 19.056 LGA S 38 S 38 10.029 0 0.630 0.820 11.114 0.000 0.000 10.027 LGA S 39 S 39 8.879 0 0.693 0.607 8.959 0.000 0.000 8.940 LGA F 40 F 40 10.861 0 0.043 1.022 14.089 0.000 0.000 13.583 LGA I 41 I 41 10.091 0 0.627 1.461 15.225 0.000 0.000 15.225 LGA G 42 G 42 3.932 0 0.687 0.687 6.156 13.636 13.636 - LGA R 43 R 43 2.624 0 0.030 1.355 5.378 34.545 20.661 4.525 LGA S 44 S 44 7.848 0 0.051 0.559 11.227 0.000 0.000 9.135 LGA K 45 K 45 14.421 0 0.609 0.695 22.480 0.000 0.000 22.480 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.320 9.213 10.187 15.052 10.559 4.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.89 39.205 33.685 0.636 LGA_LOCAL RMSD: 2.889 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.141 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.320 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.764147 * X + 0.566502 * Y + -0.308470 * Z + -10.379416 Y_new = 0.606961 * X + -0.793366 * Y + 0.046565 * Z + 36.220848 Z_new = -0.218350 * X + -0.222812 * Y + -0.950094 * Z + -3.708503 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.671255 0.220124 -2.911240 [DEG: 38.4601 12.6122 -166.8018 ] ZXZ: -1.720619 2.824332 -2.366306 [DEG: -98.5842 161.8223 -135.5794 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS431_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.89 33.685 9.32 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS431_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 -16.091 25.273 8.147 1.00 3.44 ATOM 22 CA ALA 2 -15.132 24.726 7.188 1.00 3.44 ATOM 24 CB ALA 2 -15.572 23.311 6.799 1.00 3.44 ATOM 28 C ALA 2 -14.996 25.661 5.958 1.00 3.44 ATOM 29 O ALA 2 -15.993 26.203 5.488 1.00 3.44 ATOM 30 N VAL 3 -13.799 25.865 5.401 1.00 2.51 ATOM 32 CA VAL 3 -12.486 25.392 5.888 1.00 2.51 ATOM 34 CB VAL 3 -11.558 24.965 4.745 1.00 2.51 ATOM 36 CG1 VAL 3 -12.200 23.837 3.940 1.00 2.51 ATOM 40 CG2 VAL 3 -11.165 26.091 3.799 1.00 2.51 ATOM 44 C VAL 3 -11.812 26.430 6.783 1.00 2.51 ATOM 45 O VAL 3 -12.012 27.630 6.623 1.00 2.51 ATOM 46 N GLN 4 -10.980 25.959 7.700 1.00 1.76 ATOM 48 CA GLN 4 -10.169 26.828 8.553 1.00 1.76 ATOM 50 CB GLN 4 -9.994 26.227 9.972 1.00 1.76 ATOM 53 CG GLN 4 -11.208 25.462 10.508 1.00 1.76 ATOM 56 CD GLN 4 -11.334 24.046 9.932 1.00 1.76 ATOM 57 OE1 GLN 4 -10.440 23.486 9.309 1.00 1.76 ATOM 58 NE2 GLN 4 -12.475 23.407 10.071 1.00 1.76 ATOM 61 C GLN 4 -8.828 27.034 7.865 1.00 1.76 ATOM 62 O GLN 4 -8.024 26.106 7.779 1.00 1.76 ATOM 63 N GLY 5 -8.560 28.233 7.373 1.00 1.11 ATOM 65 CA GLY 5 -7.304 28.550 6.697 1.00 1.11 ATOM 68 C GLY 5 -7.167 30.053 6.453 1.00 1.11 ATOM 69 O GLY 5 -8.017 30.814 6.924 1.00 1.11 ATOM 70 N PRO 6 -6.163 30.506 5.686 1.00 0.79 ATOM 71 CD PRO 6 -6.004 31.920 5.409 1.00 0.79 ATOM 74 CG PRO 6 -4.634 32.050 4.749 1.00 0.79 ATOM 77 CB PRO 6 -4.476 30.716 4.022 1.00 0.79 ATOM 80 CA PRO 6 -5.148 29.715 4.980 1.00 0.79 ATOM 82 C PRO 6 -4.123 29.039 5.909 1.00 0.79 ATOM 83 O PRO 6 -4.084 29.294 7.119 1.00 0.79 ATOM 84 N TRP 7 -3.276 28.193 5.330 1.00 0.72 ATOM 86 CA TRP 7 -2.126 27.579 6.000 1.00 0.72 ATOM 88 CB TRP 7 -2.010 26.100 5.637 1.00 0.72 ATOM 91 CG TRP 7 -3.095 25.230 6.199 1.00 0.72 ATOM 92 CD1 TRP 7 -2.997 24.484 7.309 1.00 0.72 ATOM 94 NE1 TRP 7 -4.186 23.801 7.525 1.00 0.72 ATOM 96 CE2 TRP 7 -5.107 24.084 6.554 1.00 0.72 ATOM 97 CZ2 TRP 7 -6.422 23.650 6.328 1.00 0.72 ATOM 99 CH2 TRP 7 -7.124 24.152 5.223 1.00 0.72 ATOM 101 CZ3 TRP 7 -6.506 25.075 4.362 1.00 0.72 ATOM 103 CE3 TRP 7 -5.174 25.486 4.581 1.00 0.72 ATOM 105 CD2 TRP 7 -4.451 25.009 5.692 1.00 0.72 ATOM 106 C TRP 7 -0.832 28.311 5.647 1.00 0.72 ATOM 107 O TRP 7 -0.654 28.747 4.505 1.00 0.72 ATOM 108 N VAL 8 0.103 28.412 6.590 1.00 0.74 ATOM 110 CA VAL 8 1.440 28.967 6.352 1.00 0.74 ATOM 112 CB VAL 8 2.054 29.519 7.653 1.00 0.74 ATOM 114 CG1 VAL 8 3.455 30.079 7.426 1.00 0.74 ATOM 118 CG2 VAL 8 1.176 30.648 8.225 1.00 0.74 ATOM 122 C VAL 8 2.335 27.907 5.715 1.00 0.74 ATOM 123 O VAL 8 2.639 26.891 6.335 1.00 0.74 ATOM 124 N GLY 9 2.766 28.136 4.470 1.00 0.81 ATOM 126 CA GLY 9 3.772 27.303 3.798 1.00 0.81 ATOM 129 C GLY 9 5.192 27.637 4.247 1.00 0.81 ATOM 130 O GLY 9 5.973 26.726 4.539 1.00 0.81 ATOM 131 N SER 10 5.522 28.918 4.382 1.00 0.76 ATOM 133 CA SER 10 6.829 29.382 4.886 1.00 0.76 ATOM 135 CB SER 10 7.851 29.427 3.735 1.00 0.76 ATOM 138 OG SER 10 9.148 29.614 4.260 1.00 0.76 ATOM 140 C SER 10 6.734 30.750 5.563 1.00 0.76 ATOM 141 O SER 10 5.973 31.616 5.126 1.00 0.76 ATOM 142 N SER 11 7.517 30.936 6.623 1.00 0.85 ATOM 144 CA SER 11 7.602 32.150 7.454 1.00 0.85 ATOM 146 CB SER 11 6.497 32.124 8.507 1.00 0.85 ATOM 149 OG SER 11 6.526 33.274 9.332 1.00 0.85 ATOM 151 C SER 11 8.964 32.205 8.162 1.00 0.85 ATOM 152 O SER 11 9.568 31.162 8.431 1.00 0.85 ATOM 153 N TYR 12 9.419 33.411 8.526 1.00 1.12 ATOM 155 CA TYR 12 10.608 33.576 9.390 1.00 1.12 ATOM 157 CB TYR 12 11.222 34.954 9.142 1.00 1.12 ATOM 160 CG TYR 12 11.994 35.014 7.842 1.00 1.12 ATOM 161 CD1 TYR 12 13.293 34.495 7.785 1.00 1.12 ATOM 163 CE1 TYR 12 14.006 34.512 6.575 1.00 1.12 ATOM 165 CZ TYR 12 13.413 35.057 5.415 1.00 1.12 ATOM 166 OH TYR 12 14.118 35.068 4.250 1.00 1.12 ATOM 168 CE2 TYR 12 12.114 35.575 5.473 1.00 1.12 ATOM 170 CD2 TYR 12 11.401 35.558 6.683 1.00 1.12 ATOM 172 C TYR 12 10.317 33.377 10.885 1.00 1.12 ATOM 173 O TYR 12 11.253 33.149 11.654 1.00 1.12 ATOM 174 N VAL 13 9.046 33.462 11.302 1.00 1.19 ATOM 176 CA VAL 13 8.627 33.395 12.719 1.00 1.19 ATOM 178 CB VAL 13 8.081 34.756 13.215 1.00 1.19 ATOM 180 CG1 VAL 13 9.187 35.807 13.318 1.00 1.19 ATOM 184 CG2 VAL 13 6.963 35.331 12.322 1.00 1.19 ATOM 188 C VAL 13 7.627 32.278 13.031 1.00 1.19 ATOM 189 O VAL 13 7.587 31.816 14.169 1.00 1.19 ATOM 190 N ALA 14 6.852 31.827 12.039 1.00 1.15 ATOM 192 CA ALA 14 5.827 30.793 12.216 1.00 1.15 ATOM 194 CB ALA 14 4.518 31.294 11.592 1.00 1.15 ATOM 198 C ALA 14 6.238 29.415 11.658 1.00 1.15 ATOM 199 O ALA 14 7.115 29.287 10.798 1.00 1.15 ATOM 200 N GLU 15 5.566 28.359 12.140 1.00 1.31 ATOM 202 CA GLU 15 5.752 26.984 11.675 1.00 1.31 ATOM 204 CB GLU 15 5.182 25.998 12.706 1.00 1.31 ATOM 207 CG GLU 15 6.044 25.843 13.966 1.00 1.31 ATOM 210 CD GLU 15 7.323 25.050 13.670 1.00 1.31 ATOM 211 OE1 GLU 15 8.369 25.653 13.328 1.00 1.31 ATOM 212 OE2 GLU 15 7.291 23.790 13.766 1.00 1.31 ATOM 213 C GLU 15 5.076 26.720 10.313 1.00 1.31 ATOM 214 O GLU 15 3.931 27.111 10.094 1.00 1.31 ATOM 215 N THR 16 5.757 25.963 9.445 1.00 1.27 ATOM 217 CA THR 16 5.139 25.397 8.228 1.00 1.27 ATOM 219 CB THR 16 6.184 24.652 7.389 1.00 1.27 ATOM 221 CG2 THR 16 5.612 23.930 6.171 1.00 1.27 ATOM 225 OG1 THR 16 7.133 25.569 6.895 1.00 1.27 ATOM 227 C THR 16 3.993 24.450 8.596 1.00 1.27 ATOM 228 O THR 16 4.098 23.626 9.511 1.00 1.27 ATOM 229 N GLY 17 2.885 24.538 7.844 1.00 1.11 ATOM 231 CA GLY 17 1.699 23.698 7.999 1.00 1.11 ATOM 234 C GLY 17 0.730 24.145 9.104 1.00 1.11 ATOM 235 O GLY 17 -0.263 23.449 9.329 1.00 1.11 ATOM 236 N GLN 18 0.976 25.280 9.774 1.00 0.89 ATOM 238 CA GLN 18 0.042 25.837 10.757 1.00 0.89 ATOM 240 CB GLN 18 0.779 26.457 11.948 1.00 0.89 ATOM 243 CG GLN 18 1.340 25.354 12.859 1.00 0.89 ATOM 246 CD GLN 18 1.514 25.775 14.318 1.00 0.89 ATOM 247 OE1 GLN 18 1.258 26.888 14.729 1.00 0.89 ATOM 248 NE2 GLN 18 1.935 24.863 15.179 1.00 0.89 ATOM 251 C GLN 18 -0.981 26.797 10.168 1.00 0.89 ATOM 252 O GLN 18 -0.809 27.362 9.087 1.00 0.89 ATOM 253 N ASN 19 -2.085 26.965 10.893 1.00 0.90 ATOM 255 CA ASN 19 -3.236 27.764 10.506 1.00 0.90 ATOM 257 CB ASN 19 -4.444 27.232 11.303 1.00 0.90 ATOM 260 CG ASN 19 -5.728 27.459 10.552 1.00 0.90 ATOM 261 OD1 ASN 19 -6.178 28.580 10.354 1.00 0.90 ATOM 262 ND2 ASN 19 -6.319 26.394 10.060 1.00 0.90 ATOM 265 C ASN 19 -3.001 29.258 10.766 1.00 0.90 ATOM 266 O ASN 19 -2.478 29.624 11.824 1.00 0.90 ATOM 267 N TRP 20 -3.445 30.138 9.869 1.00 0.84 ATOM 269 CA TRP 20 -3.383 31.592 10.099 1.00 0.84 ATOM 271 CB TRP 20 -3.928 32.330 8.870 1.00 0.84 ATOM 274 CG TRP 20 -3.961 33.813 9.027 1.00 0.84 ATOM 275 CD1 TRP 20 -5.065 34.604 9.014 1.00 0.84 ATOM 277 NE1 TRP 20 -4.697 35.915 9.274 1.00 0.84 ATOM 279 CE2 TRP 20 -3.345 36.031 9.473 1.00 0.84 ATOM 280 CZ2 TRP 20 -2.510 37.112 9.812 1.00 0.84 ATOM 282 CH2 TRP 20 -1.129 36.895 9.921 1.00 0.84 ATOM 284 CZ3 TRP 20 -0.601 35.614 9.719 1.00 0.84 ATOM 286 CE3 TRP 20 -1.445 34.527 9.424 1.00 0.84 ATOM 288 CD2 TRP 20 -2.838 34.703 9.296 1.00 0.84 ATOM 289 C TRP 20 -4.151 32.011 11.369 1.00 0.84 ATOM 290 O TRP 20 -3.668 32.819 12.146 1.00 0.84 ATOM 291 N ALA 21 -5.313 31.403 11.611 1.00 1.01 ATOM 293 CA ALA 21 -6.229 31.836 12.677 1.00 1.01 ATOM 295 CB ALA 21 -7.554 31.081 12.491 1.00 1.01 ATOM 299 C ALA 21 -5.663 31.666 14.095 1.00 1.01 ATOM 300 O ALA 21 -6.009 32.455 14.983 1.00 1.01 ATOM 301 N SER 22 -4.790 30.685 14.332 1.00 1.05 ATOM 303 CA SER 22 -4.125 30.480 15.632 1.00 1.05 ATOM 305 CB SER 22 -3.783 28.995 15.817 1.00 1.05 ATOM 308 OG SER 22 -3.128 28.485 14.674 1.00 1.05 ATOM 310 C SER 22 -2.876 31.360 15.807 1.00 1.05 ATOM 311 O SER 22 -2.575 31.764 16.929 1.00 1.05 ATOM 312 N LEU 23 -2.182 31.708 14.714 1.00 0.86 ATOM 314 CA LEU 23 -0.987 32.568 14.737 1.00 0.86 ATOM 316 CB LEU 23 -0.206 32.333 13.430 1.00 0.86 ATOM 319 CG LEU 23 0.403 30.926 13.300 1.00 0.86 ATOM 321 CD1 LEU 23 0.867 30.715 11.865 1.00 0.86 ATOM 325 CD2 LEU 23 1.599 30.726 14.228 1.00 0.86 ATOM 329 C LEU 23 -1.324 34.050 14.887 1.00 0.86 ATOM 330 O LEU 23 -0.671 34.748 15.678 1.00 0.86 ATOM 331 N ALA 24 -2.344 34.532 14.168 1.00 0.81 ATOM 333 CA ALA 24 -2.651 35.954 14.022 1.00 0.81 ATOM 335 CB ALA 24 -3.827 36.080 13.052 1.00 0.81 ATOM 339 C ALA 24 -2.960 36.658 15.357 1.00 0.81 ATOM 340 O ALA 24 -2.495 37.769 15.586 1.00 0.81 ATOM 341 N ALA 25 -3.713 35.997 16.242 1.00 1.08 ATOM 343 CA ALA 25 -4.174 36.586 17.505 1.00 1.08 ATOM 345 CB ALA 25 -5.620 36.133 17.731 1.00 1.08 ATOM 349 C ALA 25 -3.267 36.262 18.721 1.00 1.08 ATOM 350 O ALA 25 -3.277 37.017 19.687 1.00 1.08 ATOM 351 N ASN 26 -2.481 35.173 18.675 1.00 1.16 ATOM 353 CA ASN 26 -1.631 34.742 19.810 1.00 1.16 ATOM 355 CB ASN 26 -1.740 33.221 20.013 1.00 1.16 ATOM 358 CG ASN 26 -3.152 32.770 20.365 1.00 1.16 ATOM 359 OD1 ASN 26 -3.681 33.077 21.425 1.00 1.16 ATOM 360 ND2 ASN 26 -3.798 32.035 19.496 1.00 1.16 ATOM 363 C ASN 26 -0.167 35.164 19.650 1.00 1.16 ATOM 364 O ASN 26 0.411 35.758 20.575 1.00 1.16 ATOM 365 N GLU 27 0.449 34.881 18.499 1.00 1.06 ATOM 367 CA GLU 27 1.898 35.070 18.280 1.00 1.06 ATOM 369 CB GLU 27 2.460 33.908 17.430 1.00 1.06 ATOM 372 CG GLU 27 2.219 32.505 17.997 1.00 1.06 ATOM 375 CD GLU 27 2.891 32.284 19.368 1.00 1.06 ATOM 376 OE1 GLU 27 2.187 32.137 20.390 1.00 1.06 ATOM 377 OE2 GLU 27 4.142 32.214 19.432 1.00 1.06 ATOM 378 C GLU 27 2.186 36.403 17.589 1.00 1.06 ATOM 379 O GLU 27 3.035 37.188 18.025 1.00 1.06 ATOM 380 N LEU 28 1.459 36.680 16.502 1.00 0.88 ATOM 382 CA LEU 28 1.706 37.840 15.647 1.00 0.88 ATOM 384 CB LEU 28 1.378 37.449 14.187 1.00 0.88 ATOM 387 CG LEU 28 2.106 36.183 13.678 1.00 0.88 ATOM 389 CD1 LEU 28 1.668 35.879 12.258 1.00 0.88 ATOM 393 CD2 LEU 28 3.627 36.319 13.696 1.00 0.88 ATOM 397 C LEU 28 0.942 39.082 16.103 1.00 0.88 ATOM 398 O LEU 28 1.290 40.191 15.687 1.00 0.88 ATOM 399 N ARG 29 -0.077 38.945 16.964 1.00 0.90 ATOM 401 CA ARG 29 -0.871 40.048 17.571 1.00 0.90 ATOM 403 CB ARG 29 -0.046 40.756 18.674 1.00 0.90 ATOM 406 CG ARG 29 0.469 39.830 19.777 1.00 0.90 ATOM 409 CD ARG 29 -0.690 39.248 20.609 1.00 0.90 ATOM 412 NE ARG 29 -0.181 38.430 21.719 1.00 0.90 ATOM 414 CZ ARG 29 -0.459 38.601 23.007 1.00 0.90 ATOM 415 NH1 ARG 29 -1.269 39.514 23.442 1.00 0.90 ATOM 418 NH2 ARG 29 0.082 37.808 23.887 1.00 0.90 ATOM 421 C ARG 29 -1.488 41.024 16.566 1.00 0.90 ATOM 422 O ARG 29 -1.680 42.199 16.876 1.00 0.90 ATOM 423 N VAL 30 -1.828 40.547 15.380 1.00 0.87 ATOM 425 CA VAL 30 -2.359 41.354 14.255 1.00 0.87 ATOM 427 CB VAL 30 -2.441 40.448 13.006 1.00 0.87 ATOM 429 CG1 VAL 30 -3.164 41.075 11.808 1.00 0.87 ATOM 433 CG2 VAL 30 -1.034 40.087 12.531 1.00 0.87 ATOM 437 C VAL 30 -3.722 41.988 14.592 1.00 0.87 ATOM 438 O VAL 30 -4.031 43.090 14.146 1.00 0.87 ATOM 439 N THR 31 -4.499 41.316 15.453 1.00 1.08 ATOM 441 CA THR 31 -5.776 41.809 16.018 1.00 1.08 ATOM 443 CB THR 31 -6.465 40.647 16.743 1.00 1.08 ATOM 445 CG2 THR 31 -7.024 39.629 15.759 1.00 1.08 ATOM 449 OG1 THR 31 -5.502 39.959 17.512 1.00 1.08 ATOM 451 C THR 31 -5.621 42.948 17.024 1.00 1.08 ATOM 452 O THR 31 -6.588 43.676 17.268 1.00 1.08 ATOM 453 N GLU 32 -4.429 43.142 17.614 1.00 1.21 ATOM 455 CA GLU 32 -4.210 44.086 18.716 1.00 1.21 ATOM 457 CB GLU 32 -3.688 43.330 19.951 1.00 1.21 ATOM 460 CG GLU 32 -4.625 42.232 20.444 1.00 1.21 ATOM 463 CD GLU 32 -4.265 41.820 21.885 1.00 1.21 ATOM 464 OE1 GLU 32 -3.217 41.171 22.103 1.00 1.21 ATOM 465 OE2 GLU 32 -5.035 42.168 22.816 1.00 1.21 ATOM 466 C GLU 32 -3.224 45.219 18.399 1.00 1.21 ATOM 467 O GLU 32 -3.363 46.322 18.919 1.00 1.21 ATOM 468 N ARG 33 -2.188 44.939 17.585 1.00 1.07 ATOM 470 CA ARG 33 -0.951 45.744 17.507 1.00 1.07 ATOM 472 CB ARG 33 0.175 44.961 18.219 1.00 1.07 ATOM 475 CG ARG 33 -0.069 44.912 19.748 1.00 1.07 ATOM 478 CD ARG 33 0.927 44.026 20.497 1.00 1.07 ATOM 481 NE ARG 33 2.201 44.717 20.739 1.00 1.07 ATOM 483 CZ ARG 33 2.657 45.199 21.888 1.00 1.07 ATOM 484 NH1 ARG 33 1.960 45.187 22.987 1.00 1.07 ATOM 487 NH2 ARG 33 3.862 45.686 21.962 1.00 1.07 ATOM 490 C ARG 33 -0.609 46.071 16.044 1.00 1.07 ATOM 491 O ARG 33 -0.244 45.151 15.312 1.00 1.07 ATOM 492 N PRO 34 -0.664 47.352 15.609 1.00 1.10 ATOM 493 CD PRO 34 -1.185 48.501 16.340 1.00 1.10 ATOM 496 CG PRO 34 -1.508 49.550 15.285 1.00 1.10 ATOM 499 CB PRO 34 -0.481 49.280 14.191 1.00 1.10 ATOM 502 CA PRO 34 -0.259 47.756 14.255 1.00 1.10 ATOM 504 C PRO 34 1.191 47.416 13.947 1.00 1.10 ATOM 505 O PRO 34 2.014 47.333 14.854 1.00 1.10 ATOM 506 N PHE 35 1.550 47.248 12.675 1.00 1.21 ATOM 508 CA PHE 35 2.891 46.760 12.300 1.00 1.21 ATOM 510 CB PHE 35 2.902 46.499 10.789 1.00 1.21 ATOM 513 CG PHE 35 3.038 47.733 9.931 1.00 1.21 ATOM 514 CD1 PHE 35 4.312 48.175 9.529 1.00 1.21 ATOM 516 CE1 PHE 35 4.445 49.323 8.742 1.00 1.21 ATOM 518 CZ PHE 35 3.306 50.035 8.336 1.00 1.21 ATOM 520 CE2 PHE 35 2.029 49.593 8.729 1.00 1.21 ATOM 522 CD2 PHE 35 1.899 48.445 9.526 1.00 1.21 ATOM 524 C PHE 35 4.062 47.665 12.732 1.00 1.21 ATOM 525 O PHE 35 5.165 47.166 12.960 1.00 1.21 ATOM 526 N TRP 36 3.833 48.975 12.913 1.00 1.49 ATOM 528 CA TRP 36 4.841 49.909 13.452 1.00 1.49 ATOM 530 CB TRP 36 4.562 51.329 12.939 1.00 1.49 ATOM 533 CG TRP 36 3.138 51.751 12.885 1.00 1.49 ATOM 534 CD1 TRP 36 2.381 51.790 11.765 1.00 1.49 ATOM 536 NE1 TRP 36 1.114 52.239 12.061 1.00 1.49 ATOM 538 CE2 TRP 36 0.982 52.525 13.402 1.00 1.49 ATOM 539 CZ2 TRP 36 -0.079 53.001 14.170 1.00 1.49 ATOM 541 CH2 TRP 36 0.110 53.177 15.549 1.00 1.49 ATOM 543 CZ3 TRP 36 1.356 52.871 16.129 1.00 1.49 ATOM 545 CE3 TRP 36 2.415 52.395 15.351 1.00 1.49 ATOM 547 CD2 TRP 36 2.266 52.213 13.959 1.00 1.49 ATOM 548 C TRP 36 5.022 49.836 14.979 1.00 1.49 ATOM 549 O TRP 36 5.970 50.415 15.510 1.00 1.49 ATOM 550 N ILE 37 4.181 49.074 15.689 1.00 1.34 ATOM 552 CA ILE 37 4.395 48.647 17.082 1.00 1.34 ATOM 554 CB ILE 37 3.189 49.093 17.948 1.00 1.34 ATOM 556 CG2 ILE 37 2.226 47.956 18.289 1.00 1.34 ATOM 560 CG1 ILE 37 3.690 49.796 19.230 1.00 1.34 ATOM 563 CD1 ILE 37 2.565 50.452 20.049 1.00 1.34 ATOM 567 C ILE 37 4.774 47.150 17.181 1.00 1.34 ATOM 568 O ILE 37 5.634 46.791 17.999 1.00 1.34 ATOM 569 N SER 38 4.212 46.318 16.291 1.00 1.21 ATOM 571 CA SER 38 4.452 44.871 16.131 1.00 1.21 ATOM 573 CB SER 38 5.841 44.641 15.543 1.00 1.21 ATOM 576 OG SER 38 5.882 43.373 14.910 1.00 1.21 ATOM 578 C SER 38 4.189 44.040 17.387 1.00 1.21 ATOM 579 O SER 38 3.716 44.554 18.397 1.00 1.21 ATOM 580 N SER 39 4.448 42.725 17.343 1.00 1.16 ATOM 582 CA SER 39 4.476 41.875 18.556 1.00 1.16 ATOM 584 CB SER 39 3.770 40.533 18.308 1.00 1.16 ATOM 587 OG SER 39 4.655 39.531 17.888 1.00 1.16 ATOM 589 C SER 39 5.906 41.714 19.083 1.00 1.16 ATOM 590 O SER 39 6.880 41.943 18.368 1.00 1.16 ATOM 591 N PHE 40 6.055 41.304 20.341 1.00 1.39 ATOM 593 CA PHE 40 7.363 41.181 21.005 1.00 1.39 ATOM 595 CB PHE 40 7.164 41.019 22.514 1.00 1.39 ATOM 598 CG PHE 40 6.243 39.876 22.894 1.00 1.39 ATOM 599 CD1 PHE 40 4.890 40.117 23.177 1.00 1.39 ATOM 601 CE1 PHE 40 4.029 39.052 23.478 1.00 1.39 ATOM 603 CZ PHE 40 4.516 37.733 23.486 1.00 1.39 ATOM 605 CE2 PHE 40 5.869 37.493 23.204 1.00 1.39 ATOM 607 CD2 PHE 40 6.733 38.557 22.912 1.00 1.39 ATOM 609 C PHE 40 8.240 40.052 20.433 1.00 1.39 ATOM 610 O PHE 40 9.472 40.099 20.572 1.00 1.39 ATOM 611 N ILE 41 7.639 39.054 19.769 1.00 1.37 ATOM 613 CA ILE 41 8.351 37.992 19.033 1.00 1.37 ATOM 615 CB ILE 41 7.550 36.676 19.123 1.00 1.37 ATOM 617 CG2 ILE 41 6.121 36.815 18.584 1.00 1.37 ATOM 621 CG1 ILE 41 8.276 35.505 18.451 1.00 1.37 ATOM 624 CD1 ILE 41 7.713 34.133 18.851 1.00 1.37 ATOM 628 C ILE 41 8.710 38.438 17.591 1.00 1.37 ATOM 629 O ILE 41 9.531 37.803 16.915 1.00 1.37 ATOM 630 N GLY 42 8.152 39.568 17.133 1.00 1.16 ATOM 632 CA GLY 42 8.328 40.119 15.798 1.00 1.16 ATOM 635 C GLY 42 7.368 39.522 14.765 1.00 1.16 ATOM 636 O GLY 42 6.592 38.602 15.034 1.00 1.16 ATOM 637 N ARG 43 7.430 40.074 13.540 1.00 0.96 ATOM 639 CA ARG 43 6.563 39.736 12.405 1.00 0.96 ATOM 641 CB ARG 43 5.505 40.850 12.256 1.00 0.96 ATOM 644 CG ARG 43 4.119 40.340 11.849 1.00 0.96 ATOM 647 CD ARG 43 3.047 41.455 11.884 1.00 0.96 ATOM 650 NE ARG 43 2.534 41.723 13.263 1.00 0.96 ATOM 652 CZ ARG 43 1.756 42.732 13.618 1.00 0.96 ATOM 653 NH1 ARG 43 1.418 43.682 12.785 1.00 0.96 ATOM 656 NH2 ARG 43 1.274 42.803 14.830 1.00 0.96 ATOM 659 C ARG 43 7.447 39.494 11.159 1.00 0.96 ATOM 660 O ARG 43 8.503 40.109 11.025 1.00 0.96 ATOM 661 N SER 44 7.041 38.554 10.287 1.00 0.90 ATOM 663 CA SER 44 7.881 38.097 9.160 1.00 0.90 ATOM 665 CB SER 44 7.219 36.900 8.464 1.00 0.90 ATOM 668 OG SER 44 8.211 36.162 7.779 1.00 0.90 ATOM 670 C SER 44 8.180 39.214 8.139 1.00 0.90 ATOM 671 O SER 44 7.343 40.097 7.939 1.00 0.90 ATOM 672 N LYS 45 9.338 39.175 7.456 1.00 1.01 ATOM 674 CA LYS 45 9.634 40.115 6.343 1.00 1.01 ATOM 676 CB LYS 45 11.047 39.896 5.779 1.00 1.01 ATOM 679 CG LYS 45 12.109 40.629 6.586 1.00 1.01 ATOM 682 CD LYS 45 13.410 40.626 5.774 1.00 1.01 ATOM 685 CE LYS 45 14.485 41.443 6.496 1.00 1.01 ATOM 688 NZ LYS 45 15.721 41.571 5.680 1.00 1.01 ATOM 692 C LYS 45 8.655 39.957 5.179 1.00 1.01 ATOM 693 O LYS 45 8.163 40.942 4.640 1.00 1.01 TER END