####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS431_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 16 - 45 4.83 8.24 LCS_AVERAGE: 59.45 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.87 12.06 LCS_AVERAGE: 18.03 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.97 12.14 LCS_AVERAGE: 13.33 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 9 4 5 5 5 5 6 6 7 8 9 9 11 13 15 15 15 20 20 22 22 LCS_GDT V 3 V 3 5 6 14 4 5 5 5 6 7 8 10 14 15 16 16 16 20 21 23 29 31 34 35 LCS_GDT Q 4 Q 4 5 6 14 4 5 5 5 5 6 8 10 14 15 16 18 19 24 25 27 29 34 37 40 LCS_GDT G 5 G 5 5 9 14 4 5 5 5 5 8 10 12 16 18 18 20 25 26 30 35 37 37 38 40 LCS_GDT P 6 P 6 7 9 20 4 6 7 7 8 8 11 14 16 18 20 23 27 30 33 35 37 37 38 40 LCS_GDT W 7 W 7 7 9 20 4 6 7 7 8 8 12 15 17 19 21 23 27 30 33 35 37 37 38 40 LCS_GDT V 8 V 8 7 9 20 4 6 7 7 8 8 8 11 13 15 20 22 27 29 33 35 37 37 38 40 LCS_GDT G 9 G 9 7 9 20 4 6 7 7 8 8 8 11 13 15 20 21 27 29 33 35 37 37 38 40 LCS_GDT S 10 S 10 7 9 20 4 6 7 7 8 8 9 11 13 15 20 22 27 30 33 35 37 37 38 40 LCS_GDT S 11 S 11 7 9 20 3 5 7 7 8 8 9 11 13 15 20 22 27 29 33 35 37 37 38 40 LCS_GDT Y 12 Y 12 7 9 20 3 6 7 7 8 8 9 11 13 14 15 17 20 23 28 32 33 35 38 40 LCS_GDT V 13 V 13 3 9 20 3 4 4 6 8 8 8 10 10 11 11 14 16 18 23 30 33 35 38 40 LCS_GDT A 14 A 14 4 5 20 3 3 4 4 5 6 9 11 13 15 20 21 27 29 33 35 37 37 38 40 LCS_GDT E 15 E 15 4 5 20 3 3 4 4 5 5 8 10 10 11 12 17 17 18 20 23 28 34 38 40 LCS_GDT T 16 T 16 4 5 30 3 3 4 4 5 6 9 11 13 15 15 18 23 29 32 35 37 37 38 40 LCS_GDT G 17 G 17 4 5 30 3 3 4 4 5 8 12 13 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT Q 18 Q 18 4 4 30 3 3 4 4 6 7 9 15 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT N 19 N 19 4 11 30 3 3 5 6 9 12 14 17 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT W 20 W 20 9 11 30 7 7 9 10 11 11 14 16 18 20 22 27 27 30 33 35 37 37 38 40 LCS_GDT A 21 A 21 9 11 30 7 7 9 10 11 11 13 16 17 20 21 27 27 30 33 35 37 37 38 40 LCS_GDT S 22 S 22 9 11 30 7 7 9 10 11 11 14 16 19 20 24 27 27 30 33 35 37 37 38 40 LCS_GDT L 23 L 23 9 11 30 7 7 9 10 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT A 24 A 24 9 11 30 7 7 9 10 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT A 25 A 25 9 11 30 7 7 9 10 11 11 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT N 26 N 26 9 11 30 7 7 9 10 11 11 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT E 27 E 27 9 11 30 3 6 9 10 11 11 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT L 28 L 28 9 11 30 3 4 8 10 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT R 29 R 29 5 11 30 3 4 6 10 10 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT V 30 V 30 3 5 30 3 3 3 4 5 8 12 18 19 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT T 31 T 31 3 6 30 3 3 5 6 9 11 13 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT E 32 E 32 5 6 30 3 4 5 6 9 11 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT R 33 R 33 5 6 30 3 4 5 5 7 9 11 15 19 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT P 34 P 34 5 6 30 3 4 5 5 6 8 11 15 19 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT F 35 F 35 5 6 30 3 4 5 5 9 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT W 36 W 36 5 7 30 4 5 5 6 9 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT I 37 I 37 5 7 30 4 5 5 6 7 11 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT S 38 S 38 5 7 30 4 5 5 6 7 8 10 12 17 20 23 25 27 28 30 33 37 37 38 40 LCS_GDT S 39 S 39 5 7 30 4 5 5 6 9 10 14 16 21 22 24 27 27 30 33 35 37 37 38 40 LCS_GDT F 40 F 40 5 7 30 4 5 5 6 9 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT I 41 I 41 5 7 30 4 5 5 6 9 12 14 18 21 23 24 27 27 30 31 35 37 37 38 40 LCS_GDT G 42 G 42 5 7 30 4 5 5 6 9 9 12 14 19 20 23 25 26 28 29 32 35 37 38 39 LCS_GDT R 43 R 43 5 7 30 4 5 5 6 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT S 44 S 44 5 7 30 4 5 9 9 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_GDT K 45 K 45 5 7 30 3 5 5 6 9 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 LCS_AVERAGE LCS_A: 30.27 ( 13.33 18.03 59.45 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 7 9 10 11 12 14 18 21 23 24 27 27 30 33 35 37 37 38 40 GDT PERCENT_AT 15.91 15.91 20.45 22.73 25.00 27.27 31.82 40.91 47.73 52.27 54.55 61.36 61.36 68.18 75.00 79.55 84.09 84.09 86.36 90.91 GDT RMS_LOCAL 0.26 0.26 0.82 1.25 1.39 2.41 2.53 3.03 3.32 3.64 3.73 4.21 4.16 4.75 5.28 5.52 5.75 5.75 5.88 6.29 GDT RMS_ALL_AT 12.06 12.06 11.85 12.20 11.50 8.43 8.38 8.81 8.29 8.40 8.28 8.32 8.41 7.68 7.51 7.45 7.40 7.40 7.39 7.40 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 19.971 0 0.029 0.041 22.108 0.000 0.000 - LGA V 3 V 3 13.052 0 0.017 0.108 15.285 0.000 0.000 8.196 LGA Q 4 Q 4 14.226 0 0.037 0.111 23.082 0.000 0.000 20.094 LGA G 5 G 5 12.636 0 0.048 0.048 14.482 0.000 0.000 - LGA P 6 P 6 11.836 0 0.688 0.569 12.745 0.000 0.000 12.745 LGA W 7 W 7 10.980 0 0.056 1.164 16.097 0.000 0.000 15.872 LGA V 8 V 8 12.947 0 0.006 0.044 15.163 0.000 0.000 15.163 LGA G 9 G 9 12.886 0 0.226 0.226 13.232 0.000 0.000 - LGA S 10 S 10 10.521 0 0.059 0.615 12.046 0.000 0.000 9.904 LGA S 11 S 11 12.824 0 0.090 0.713 14.205 0.000 0.000 12.609 LGA Y 12 Y 12 14.692 0 0.625 1.134 17.697 0.000 0.000 17.697 LGA V 13 V 13 14.412 0 0.185 1.167 15.614 0.000 0.000 13.794 LGA A 14 A 14 13.880 0 0.600 0.587 15.304 0.000 0.000 - LGA E 15 E 15 15.840 0 0.074 1.516 23.795 0.000 0.000 23.795 LGA T 16 T 16 12.242 0 0.103 0.219 15.955 0.000 0.000 12.843 LGA G 17 G 17 5.535 0 0.187 0.187 8.201 8.182 8.182 - LGA Q 18 Q 18 5.131 0 0.599 1.338 10.454 5.455 2.424 9.290 LGA N 19 N 19 4.542 0 0.067 0.870 8.125 3.182 1.591 5.988 LGA W 20 W 20 7.560 0 0.599 1.151 17.051 0.000 0.000 17.051 LGA A 21 A 21 7.726 0 0.051 0.060 9.414 0.000 0.000 - LGA S 22 S 22 6.303 0 0.034 0.654 7.277 1.818 1.212 7.277 LGA L 23 L 23 2.484 0 0.080 1.386 4.796 50.000 32.273 3.014 LGA A 24 A 24 2.522 0 0.020 0.029 4.094 46.818 38.545 - LGA A 25 A 25 3.305 0 0.103 0.100 5.116 18.636 14.909 - LGA N 26 N 26 3.820 0 0.023 0.578 6.517 12.727 6.591 5.933 LGA E 27 E 27 3.906 0 0.059 0.308 7.614 14.545 6.667 6.727 LGA L 28 L 28 2.396 0 0.295 0.319 7.122 42.273 22.500 7.122 LGA R 29 R 29 2.459 0 0.533 1.283 12.743 58.636 21.488 12.743 LGA V 30 V 30 4.378 0 0.643 0.987 8.251 8.636 4.935 8.251 LGA T 31 T 31 4.210 0 0.703 0.618 6.045 6.818 3.896 5.161 LGA E 32 E 32 2.396 0 0.672 1.215 4.522 35.455 22.424 3.472 LGA R 33 R 33 6.488 0 0.076 1.319 11.003 0.455 0.165 11.003 LGA P 34 P 34 7.195 0 0.061 0.120 10.684 1.818 1.039 10.684 LGA F 35 F 35 1.436 0 0.075 1.241 9.972 50.909 19.504 9.696 LGA W 36 W 36 2.543 0 0.621 0.454 10.138 45.455 13.377 10.138 LGA I 37 I 37 2.914 0 0.084 1.010 9.397 30.909 15.455 9.397 LGA S 38 S 38 5.993 0 0.099 0.133 8.197 0.455 0.303 7.837 LGA S 39 S 39 5.378 0 0.059 0.672 6.395 2.727 1.818 5.107 LGA F 40 F 40 2.275 0 0.047 0.766 6.444 41.364 18.512 6.444 LGA I 41 I 41 2.580 0 0.614 1.000 6.011 33.636 20.227 4.089 LGA G 42 G 42 6.426 0 0.072 0.072 6.648 0.000 0.000 - LGA R 43 R 43 3.400 0 0.099 1.400 11.450 20.909 10.083 11.079 LGA S 44 S 44 3.243 0 0.071 0.592 6.692 42.273 28.182 6.692 LGA K 45 K 45 2.558 0 0.033 0.987 12.280 49.545 22.020 12.280 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.275 7.109 8.408 14.401 7.689 1.195 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 3.03 39.773 34.012 0.575 LGA_LOCAL RMSD: 3.030 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.812 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.275 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.022185 * X + 0.857309 * Y + 0.514324 * Z + 10.614402 Y_new = -0.061652 * X + -0.512299 * Y + 0.856591 * Z + 39.039623 Z_new = 0.997851 * X + -0.050713 * Y + 0.041490 * Z + 7.741082 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.225381 -1.505227 -0.885098 [DEG: -70.2092 -86.2432 -50.7124 ] ZXZ: 2.600856 1.529295 1.621575 [DEG: 149.0181 87.6221 92.9094 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS431_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 3.03 34.012 7.27 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS431_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 20 N ALA 2 -8.728 36.136 4.908 1.00 1.84 ATOM 22 CA ALA 2 -8.030 35.625 6.084 1.00 1.84 ATOM 24 CB ALA 2 -8.679 34.301 6.517 1.00 1.84 ATOM 28 C ALA 2 -6.536 35.443 5.779 1.00 1.84 ATOM 29 O ALA 2 -6.158 35.154 4.640 1.00 1.84 ATOM 30 N VAL 3 -5.691 35.563 6.810 1.00 1.18 ATOM 32 CA VAL 3 -4.257 35.220 6.716 1.00 1.18 ATOM 34 CB VAL 3 -3.369 36.288 7.394 1.00 1.18 ATOM 36 CG1 VAL 3 -1.891 35.890 7.417 1.00 1.18 ATOM 40 CG2 VAL 3 -3.465 37.609 6.626 1.00 1.18 ATOM 44 C VAL 3 -4.033 33.820 7.296 1.00 1.18 ATOM 45 O VAL 3 -4.560 33.478 8.359 1.00 1.18 ATOM 46 N GLN 4 -3.229 33.010 6.587 1.00 1.02 ATOM 48 CA GLN 4 -2.845 31.662 6.986 1.00 1.02 ATOM 50 CB GLN 4 -3.323 30.634 5.941 1.00 1.02 ATOM 53 CG GLN 4 -4.843 30.534 5.899 1.00 1.02 ATOM 56 CD GLN 4 -5.314 29.363 5.035 1.00 1.02 ATOM 57 OE1 GLN 4 -4.709 28.990 4.037 1.00 1.02 ATOM 58 NE2 GLN 4 -6.412 28.722 5.381 1.00 1.02 ATOM 61 C GLN 4 -1.336 31.554 7.156 1.00 1.02 ATOM 62 O GLN 4 -0.574 32.305 6.545 1.00 1.02 ATOM 63 N GLY 5 -0.890 30.582 7.948 1.00 0.96 ATOM 65 CA GLY 5 0.533 30.258 8.077 1.00 0.96 ATOM 68 C GLY 5 1.117 29.583 6.820 1.00 0.96 ATOM 69 O GLY 5 0.361 29.146 5.938 1.00 0.96 ATOM 70 N PRO 6 2.456 29.473 6.713 1.00 0.80 ATOM 71 CD PRO 6 3.446 29.942 7.672 1.00 0.80 ATOM 74 CG PRO 6 4.725 29.165 7.365 1.00 0.80 ATOM 77 CB PRO 6 4.617 28.918 5.859 1.00 0.80 ATOM 80 CA PRO 6 3.110 28.701 5.649 1.00 0.80 ATOM 82 C PRO 6 2.731 27.220 5.716 1.00 0.80 ATOM 83 O PRO 6 2.125 26.755 6.683 1.00 0.80 ATOM 84 N TRP 7 3.054 26.459 4.670 1.00 0.93 ATOM 86 CA TRP 7 2.573 25.086 4.495 1.00 0.93 ATOM 88 CB TRP 7 2.504 24.768 3.004 1.00 0.93 ATOM 91 CG TRP 7 2.010 23.388 2.669 1.00 0.93 ATOM 92 CD1 TRP 7 2.695 22.498 1.938 1.00 0.93 ATOM 94 NE1 TRP 7 2.020 21.295 1.898 1.00 0.93 ATOM 96 CE2 TRP 7 0.833 21.366 2.600 1.00 0.93 ATOM 97 CZ2 TRP 7 -0.169 20.425 2.865 1.00 0.93 ATOM 99 CH2 TRP 7 -1.290 20.818 3.606 1.00 0.93 ATOM 101 CZ3 TRP 7 -1.379 22.144 4.081 1.00 0.93 ATOM 103 CE3 TRP 7 -0.361 23.075 3.815 1.00 0.93 ATOM 105 CD2 TRP 7 0.785 22.702 3.085 1.00 0.93 ATOM 106 C TRP 7 3.391 24.088 5.327 1.00 0.93 ATOM 107 O TRP 7 4.197 23.302 4.820 1.00 0.93 ATOM 108 N VAL 8 3.204 24.113 6.646 1.00 1.25 ATOM 110 CA VAL 8 3.890 23.233 7.619 1.00 1.25 ATOM 112 CB VAL 8 3.465 23.630 9.045 1.00 1.25 ATOM 114 CG1 VAL 8 3.923 22.648 10.137 1.00 1.25 ATOM 118 CG2 VAL 8 4.058 24.995 9.417 1.00 1.25 ATOM 122 C VAL 8 3.632 21.756 7.343 1.00 1.25 ATOM 123 O VAL 8 4.492 20.921 7.633 1.00 1.25 ATOM 124 N GLY 9 2.504 21.413 6.705 1.00 1.87 ATOM 126 CA GLY 9 2.139 20.040 6.328 1.00 1.87 ATOM 129 C GLY 9 3.142 19.331 5.400 1.00 1.87 ATOM 130 O GLY 9 3.123 18.095 5.344 1.00 1.87 ATOM 131 N SER 10 4.034 20.054 4.713 1.00 2.23 ATOM 133 CA SER 10 5.162 19.436 3.978 1.00 2.23 ATOM 135 CB SER 10 5.820 20.418 3.022 1.00 2.23 ATOM 138 OG SER 10 5.012 20.585 1.878 1.00 2.23 ATOM 140 C SER 10 6.282 18.917 4.893 1.00 2.23 ATOM 141 O SER 10 6.883 17.881 4.616 1.00 2.23 ATOM 142 N SER 11 6.596 19.669 5.965 1.00 2.19 ATOM 144 CA SER 11 7.767 19.415 6.825 1.00 2.19 ATOM 146 CB SER 11 8.391 20.747 7.265 1.00 2.19 ATOM 149 OG SER 11 8.540 21.633 6.164 1.00 2.19 ATOM 151 C SER 11 7.434 18.597 8.075 1.00 2.19 ATOM 152 O SER 11 8.287 17.885 8.593 1.00 2.19 ATOM 153 N TYR 12 6.206 18.737 8.582 1.00 2.02 ATOM 155 CA TYR 12 5.735 18.120 9.817 1.00 2.02 ATOM 157 CB TYR 12 5.023 19.208 10.642 1.00 2.02 ATOM 160 CG TYR 12 4.546 18.763 12.008 1.00 2.02 ATOM 161 CD1 TYR 12 3.181 18.866 12.335 1.00 2.02 ATOM 163 CE1 TYR 12 2.720 18.440 13.592 1.00 2.02 ATOM 165 CZ TYR 12 3.629 17.896 14.530 1.00 2.02 ATOM 166 OH TYR 12 3.181 17.475 15.747 1.00 2.02 ATOM 168 CE2 TYR 12 4.994 17.793 14.193 1.00 2.02 ATOM 170 CD2 TYR 12 5.446 18.224 12.937 1.00 2.02 ATOM 172 C TYR 12 4.855 16.886 9.570 1.00 2.02 ATOM 173 O TYR 12 4.288 16.707 8.489 1.00 2.02 ATOM 174 N VAL 13 4.723 16.018 10.582 1.00 2.27 ATOM 176 CA VAL 13 4.102 14.680 10.453 1.00 2.27 ATOM 178 CB VAL 13 4.573 13.736 11.576 1.00 2.27 ATOM 180 CG1 VAL 13 6.082 13.532 11.540 1.00 2.27 ATOM 184 CG2 VAL 13 4.176 14.222 12.978 1.00 2.27 ATOM 188 C VAL 13 2.567 14.694 10.387 1.00 2.27 ATOM 189 O VAL 13 1.983 13.674 10.027 1.00 2.27 ATOM 190 N ALA 14 1.916 15.816 10.722 1.00 1.77 ATOM 192 CA ALA 14 0.464 15.939 10.762 1.00 1.77 ATOM 194 CB ALA 14 0.011 15.721 12.211 1.00 1.77 ATOM 198 C ALA 14 -0.018 17.294 10.225 1.00 1.77 ATOM 199 O ALA 14 0.643 18.325 10.394 1.00 1.77 ATOM 200 N GLU 15 -1.203 17.322 9.631 1.00 2.02 ATOM 202 CA GLU 15 -1.848 18.539 9.110 1.00 2.02 ATOM 204 CB GLU 15 -3.157 18.217 8.377 1.00 2.02 ATOM 207 CG GLU 15 -3.111 17.022 7.420 1.00 2.02 ATOM 210 CD GLU 15 -3.522 15.715 8.151 1.00 2.02 ATOM 211 OE1 GLU 15 -4.713 15.348 8.094 1.00 2.02 ATOM 212 OE2 GLU 15 -2.656 15.072 8.783 1.00 2.02 ATOM 213 C GLU 15 -2.168 19.554 10.212 1.00 2.02 ATOM 214 O GLU 15 -2.287 20.747 9.947 1.00 2.02 ATOM 215 N THR 16 -2.261 19.117 11.469 1.00 1.97 ATOM 217 CA THR 16 -2.488 19.967 12.649 1.00 1.97 ATOM 219 CB THR 16 -2.444 19.096 13.917 1.00 1.97 ATOM 221 CG2 THR 16 -3.631 18.136 13.995 1.00 1.97 ATOM 225 OG1 THR 16 -1.275 18.304 13.863 1.00 1.97 ATOM 227 C THR 16 -1.454 21.079 12.785 1.00 1.97 ATOM 228 O THR 16 -1.799 22.176 13.222 1.00 1.97 ATOM 229 N GLY 17 -0.222 20.864 12.314 1.00 1.39 ATOM 231 CA GLY 17 0.811 21.916 12.246 1.00 1.39 ATOM 234 C GLY 17 0.402 23.114 11.387 1.00 1.39 ATOM 235 O GLY 17 0.814 24.241 11.688 1.00 1.39 ATOM 236 N GLN 18 -0.469 22.926 10.392 1.00 1.28 ATOM 238 CA GLN 18 -1.054 24.016 9.601 1.00 1.28 ATOM 240 CB GLN 18 -1.775 23.399 8.376 1.00 1.28 ATOM 243 CG GLN 18 -2.088 24.445 7.305 1.00 1.28 ATOM 246 CD GLN 18 -0.811 25.036 6.742 1.00 1.28 ATOM 247 OE1 GLN 18 0.230 24.402 6.700 1.00 1.28 ATOM 248 NE2 GLN 18 -0.814 26.284 6.328 1.00 1.28 ATOM 251 C GLN 18 -2.037 24.847 10.416 1.00 1.28 ATOM 252 O GLN 18 -1.994 26.070 10.420 1.00 1.28 ATOM 253 N ASN 19 -2.903 24.163 11.174 1.00 1.23 ATOM 255 CA ASN 19 -3.896 24.775 12.056 1.00 1.23 ATOM 257 CB ASN 19 -4.725 23.621 12.664 1.00 1.23 ATOM 260 CG ASN 19 -6.161 24.003 12.930 1.00 1.23 ATOM 261 OD1 ASN 19 -7.083 23.366 12.450 1.00 1.23 ATOM 262 ND2 ASN 19 -6.420 25.056 13.673 1.00 1.23 ATOM 265 C ASN 19 -3.197 25.622 13.135 1.00 1.23 ATOM 266 O ASN 19 -3.608 26.742 13.424 1.00 1.23 ATOM 267 N TRP 20 -2.101 25.102 13.670 1.00 1.13 ATOM 269 CA TRP 20 -1.213 25.771 14.623 1.00 1.13 ATOM 271 CB TRP 20 -0.264 24.675 15.116 1.00 1.13 ATOM 274 CG TRP 20 0.880 25.079 15.977 1.00 1.13 ATOM 275 CD1 TRP 20 2.132 24.591 15.839 1.00 1.13 ATOM 277 NE1 TRP 20 2.937 25.099 16.834 1.00 1.13 ATOM 279 CE2 TRP 20 2.238 25.933 17.673 1.00 1.13 ATOM 280 CZ2 TRP 20 2.605 26.649 18.822 1.00 1.13 ATOM 282 CH2 TRP 20 1.630 27.413 19.482 1.00 1.13 ATOM 284 CZ3 TRP 20 0.314 27.445 18.982 1.00 1.13 ATOM 286 CE3 TRP 20 -0.036 26.719 17.832 1.00 1.13 ATOM 288 CD2 TRP 20 0.919 25.946 17.142 1.00 1.13 ATOM 289 C TRP 20 -0.495 26.992 14.021 1.00 1.13 ATOM 290 O TRP 20 -0.497 28.062 14.619 1.00 1.13 ATOM 291 N ALA 21 0.011 26.888 12.791 1.00 1.05 ATOM 293 CA ALA 21 0.651 28.009 12.084 1.00 1.05 ATOM 295 CB ALA 21 1.320 27.458 10.823 1.00 1.05 ATOM 299 C ALA 21 -0.339 29.155 11.776 1.00 1.05 ATOM 300 O ALA 21 0.001 30.332 11.952 1.00 1.05 ATOM 301 N SER 22 -1.575 28.843 11.384 1.00 1.01 ATOM 303 CA SER 22 -2.626 29.856 11.189 1.00 1.01 ATOM 305 CB SER 22 -3.756 29.256 10.365 1.00 1.01 ATOM 308 OG SER 22 -3.211 28.967 9.093 1.00 1.01 ATOM 310 C SER 22 -3.133 30.459 12.500 1.00 1.01 ATOM 311 O SER 22 -3.409 31.650 12.550 1.00 1.01 ATOM 312 N LEU 23 -3.157 29.685 13.595 1.00 1.05 ATOM 314 CA LEU 23 -3.430 30.228 14.928 1.00 1.05 ATOM 316 CB LEU 23 -3.573 29.052 15.921 1.00 1.05 ATOM 319 CG LEU 23 -4.152 29.451 17.281 1.00 1.05 ATOM 321 CD1 LEU 23 -5.629 29.839 17.188 1.00 1.05 ATOM 325 CD2 LEU 23 -4.062 28.276 18.249 1.00 1.05 ATOM 329 C LEU 23 -2.335 31.219 15.356 1.00 1.05 ATOM 330 O LEU 23 -2.658 32.315 15.781 1.00 1.05 ATOM 331 N ALA 24 -1.064 30.887 15.136 1.00 1.13 ATOM 333 CA ALA 24 0.061 31.785 15.427 1.00 1.13 ATOM 335 CB ALA 24 1.369 31.037 15.132 1.00 1.13 ATOM 339 C ALA 24 -0.021 33.109 14.669 1.00 1.13 ATOM 340 O ALA 24 0.258 34.163 15.239 1.00 1.13 ATOM 341 N ALA 25 -0.486 33.099 13.416 1.00 0.96 ATOM 343 CA ALA 25 -0.670 34.333 12.625 1.00 0.96 ATOM 345 CB ALA 25 -0.956 33.921 11.173 1.00 0.96 ATOM 349 C ALA 25 -1.769 35.270 13.178 1.00 0.96 ATOM 350 O ALA 25 -1.679 36.474 12.980 1.00 0.96 ATOM 351 N ASN 26 -2.774 34.730 13.879 1.00 0.92 ATOM 353 CA ASN 26 -3.916 35.520 14.384 1.00 0.92 ATOM 355 CB ASN 26 -5.212 34.774 14.026 1.00 0.92 ATOM 358 CG ASN 26 -5.492 34.804 12.531 1.00 0.92 ATOM 359 OD1 ASN 26 -6.094 35.740 12.021 1.00 0.92 ATOM 360 ND2 ASN 26 -5.085 33.803 11.778 1.00 0.92 ATOM 363 C ASN 26 -3.812 35.839 15.884 1.00 0.92 ATOM 364 O ASN 26 -4.152 36.947 16.291 1.00 0.92 ATOM 365 N GLU 27 -3.322 34.899 16.707 1.00 0.94 ATOM 367 CA GLU 27 -3.226 35.051 18.168 1.00 0.94 ATOM 369 CB GLU 27 -3.379 33.674 18.838 1.00 0.94 ATOM 372 CG GLU 27 -4.794 33.092 18.753 1.00 0.94 ATOM 375 CD GLU 27 -5.796 33.909 19.587 1.00 0.94 ATOM 376 OE1 GLU 27 -5.822 33.760 20.841 1.00 0.94 ATOM 377 OE2 GLU 27 -6.581 34.701 19.012 1.00 0.94 ATOM 378 C GLU 27 -1.906 35.672 18.628 1.00 0.94 ATOM 379 O GLU 27 -1.902 36.464 19.568 1.00 0.94 ATOM 380 N LEU 28 -0.774 35.326 17.990 1.00 0.89 ATOM 382 CA LEU 28 0.565 35.727 18.436 1.00 0.89 ATOM 384 CB LEU 28 1.559 34.552 18.321 1.00 0.89 ATOM 387 CG LEU 28 1.164 33.270 19.072 1.00 0.89 ATOM 389 CD1 LEU 28 2.245 32.210 18.873 1.00 0.89 ATOM 393 CD2 LEU 28 0.987 33.490 20.573 1.00 0.89 ATOM 397 C LEU 28 1.034 36.975 17.701 1.00 0.89 ATOM 398 O LEU 28 1.993 36.937 16.946 1.00 0.89 ATOM 399 N ARG 29 0.358 38.106 17.916 1.00 0.88 ATOM 401 CA ARG 29 0.758 39.432 17.398 1.00 0.88 ATOM 403 CB ARG 29 0.041 39.752 16.060 1.00 0.88 ATOM 406 CG ARG 29 -1.469 39.525 16.090 1.00 0.88 ATOM 409 CD ARG 29 -2.141 39.726 14.724 1.00 0.88 ATOM 412 NE ARG 29 -3.570 39.353 14.833 1.00 0.88 ATOM 414 CZ ARG 29 -4.586 39.776 14.100 1.00 0.88 ATOM 415 NH1 ARG 29 -4.440 40.533 13.052 1.00 0.88 ATOM 418 NH2 ARG 29 -5.797 39.413 14.436 1.00 0.88 ATOM 421 C ARG 29 0.622 40.524 18.470 1.00 0.88 ATOM 422 O ARG 29 -0.298 40.464 19.289 1.00 0.88 ATOM 423 N VAL 30 1.565 41.474 18.498 1.00 0.98 ATOM 425 CA VAL 30 1.681 42.435 19.627 1.00 0.98 ATOM 427 CB VAL 30 3.094 43.052 19.744 1.00 0.98 ATOM 429 CG1 VAL 30 4.143 41.988 20.026 1.00 0.98 ATOM 433 CG2 VAL 30 3.546 43.833 18.500 1.00 0.98 ATOM 437 C VAL 30 0.587 43.513 19.618 1.00 0.98 ATOM 438 O VAL 30 0.100 43.882 20.684 1.00 0.98 ATOM 439 N THR 31 0.138 43.933 18.431 1.00 0.88 ATOM 441 CA THR 31 -1.175 44.569 18.209 1.00 0.88 ATOM 443 CB THR 31 -1.100 46.095 18.061 1.00 0.88 ATOM 445 CG2 THR 31 -0.472 46.817 19.224 1.00 0.88 ATOM 449 OG1 THR 31 -0.321 46.417 16.941 1.00 0.88 ATOM 451 C THR 31 -1.815 43.975 16.954 1.00 0.88 ATOM 452 O THR 31 -1.115 43.516 16.058 1.00 0.88 ATOM 453 N GLU 32 -3.139 43.992 16.864 1.00 0.95 ATOM 455 CA GLU 32 -3.886 43.481 15.707 1.00 0.95 ATOM 457 CB GLU 32 -5.269 42.960 16.136 1.00 0.95 ATOM 460 CG GLU 32 -6.285 44.026 16.585 1.00 0.95 ATOM 463 CD GLU 32 -5.851 44.803 17.846 1.00 0.95 ATOM 464 OE1 GLU 32 -5.471 44.187 18.862 1.00 0.95 ATOM 465 OE2 GLU 32 -5.847 46.064 17.794 1.00 0.95 ATOM 466 C GLU 32 -3.954 44.444 14.505 1.00 0.95 ATOM 467 O GLU 32 -4.464 44.066 13.451 1.00 0.95 ATOM 468 N ARG 33 -3.406 45.663 14.608 1.00 0.87 ATOM 470 CA ARG 33 -3.441 46.704 13.551 1.00 0.87 ATOM 472 CB ARG 33 -4.144 47.951 14.105 1.00 0.87 ATOM 475 CG ARG 33 -5.671 47.787 14.018 1.00 0.87 ATOM 478 CD ARG 33 -6.385 48.852 14.851 1.00 0.87 ATOM 481 NE ARG 33 -6.281 48.533 16.283 1.00 0.87 ATOM 483 CZ ARG 33 -6.604 49.297 17.299 1.00 0.87 ATOM 484 NH1 ARG 33 -7.063 50.513 17.174 1.00 0.87 ATOM 487 NH2 ARG 33 -6.476 48.789 18.487 1.00 0.87 ATOM 490 C ARG 33 -2.046 47.025 12.999 1.00 0.87 ATOM 491 O ARG 33 -1.087 46.972 13.766 1.00 0.87 ATOM 492 N PRO 34 -1.888 47.378 11.714 1.00 0.94 ATOM 493 CD PRO 34 -0.592 47.748 11.147 1.00 0.94 ATOM 496 CG PRO 34 -0.936 48.710 10.011 1.00 0.94 ATOM 499 CB PRO 34 -2.240 48.142 9.464 1.00 0.94 ATOM 502 CA PRO 34 -2.918 47.475 10.671 1.00 0.94 ATOM 504 C PRO 34 -3.471 46.096 10.317 1.00 0.94 ATOM 505 O PRO 34 -2.756 45.111 10.461 1.00 0.94 ATOM 506 N PHE 35 -4.732 45.999 9.888 1.00 0.96 ATOM 508 CA PHE 35 -5.380 44.708 9.612 1.00 0.96 ATOM 510 CB PHE 35 -6.805 44.911 9.105 1.00 0.96 ATOM 513 CG PHE 35 -7.732 45.524 10.116 1.00 0.96 ATOM 514 CD1 PHE 35 -8.222 46.831 9.927 1.00 0.96 ATOM 516 CE1 PHE 35 -9.087 47.398 10.883 1.00 0.96 ATOM 518 CZ PHE 35 -9.462 46.657 12.018 1.00 0.96 ATOM 520 CE2 PHE 35 -8.967 45.359 12.208 1.00 0.96 ATOM 522 CD2 PHE 35 -8.102 44.792 11.252 1.00 0.96 ATOM 524 C PHE 35 -4.586 43.872 8.601 1.00 0.96 ATOM 525 O PHE 35 -4.093 44.406 7.601 1.00 0.96 ATOM 526 N TRP 36 -4.475 42.566 8.879 1.00 0.87 ATOM 528 CA TRP 36 -3.665 41.554 8.167 1.00 0.87 ATOM 530 CB TRP 36 -4.166 41.364 6.733 1.00 0.87 ATOM 533 CG TRP 36 -5.638 41.239 6.588 1.00 0.87 ATOM 534 CD1 TRP 36 -6.419 42.036 5.833 1.00 0.87 ATOM 536 NE1 TRP 36 -7.736 41.654 5.959 1.00 0.87 ATOM 538 CE2 TRP 36 -7.874 40.597 6.818 1.00 0.87 ATOM 539 CZ2 TRP 36 -8.979 39.873 7.269 1.00 0.87 ATOM 541 CH2 TRP 36 -8.783 38.824 8.182 1.00 0.87 ATOM 543 CZ3 TRP 36 -7.488 38.527 8.626 1.00 0.87 ATOM 545 CE3 TRP 36 -6.382 39.251 8.165 1.00 0.87 ATOM 547 CD2 TRP 36 -6.543 40.303 7.242 1.00 0.87 ATOM 548 C TRP 36 -2.162 41.783 8.178 1.00 0.87 ATOM 549 O TRP 36 -1.404 40.862 8.404 1.00 0.87 ATOM 550 N ILE 37 -1.710 43.027 7.994 1.00 0.69 ATOM 552 CA ILE 37 -0.289 43.408 8.056 1.00 0.69 ATOM 554 CB ILE 37 -0.119 44.869 7.591 1.00 0.69 ATOM 556 CG2 ILE 37 1.343 45.349 7.749 1.00 0.69 ATOM 560 CG1 ILE 37 -0.576 44.993 6.116 1.00 0.69 ATOM 563 CD1 ILE 37 -0.512 46.407 5.540 1.00 0.69 ATOM 567 C ILE 37 0.257 43.129 9.460 1.00 0.69 ATOM 568 O ILE 37 1.369 42.653 9.596 1.00 0.69 ATOM 569 N SER 38 -0.551 43.272 10.509 1.00 0.61 ATOM 571 CA SER 38 -0.224 42.845 11.878 1.00 0.61 ATOM 573 CB SER 38 -1.411 43.153 12.765 1.00 0.61 ATOM 576 OG SER 38 -2.554 42.524 12.211 1.00 0.61 ATOM 578 C SER 38 0.093 41.354 11.979 1.00 0.61 ATOM 579 O SER 38 0.998 40.963 12.697 1.00 0.61 ATOM 580 N SER 39 -0.579 40.524 11.181 1.00 0.64 ATOM 582 CA SER 39 -0.395 39.062 11.117 1.00 0.64 ATOM 584 CB SER 39 -1.618 38.428 10.454 1.00 0.64 ATOM 587 OG SER 39 -2.788 39.010 11.017 1.00 0.64 ATOM 589 C SER 39 0.892 38.651 10.402 1.00 0.64 ATOM 590 O SER 39 1.389 37.549 10.613 1.00 0.64 ATOM 591 N PHE 40 1.480 39.540 9.582 1.00 0.61 ATOM 593 CA PHE 40 2.783 39.327 8.918 1.00 0.61 ATOM 595 CB PHE 40 2.656 39.824 7.468 1.00 0.61 ATOM 598 CG PHE 40 1.825 38.954 6.551 1.00 0.61 ATOM 599 CD1 PHE 40 2.392 37.815 5.947 1.00 0.61 ATOM 601 CE1 PHE 40 1.645 37.046 5.034 1.00 0.61 ATOM 603 CZ PHE 40 0.328 37.432 4.707 1.00 0.61 ATOM 605 CE2 PHE 40 -0.238 38.573 5.301 1.00 0.61 ATOM 607 CD2 PHE 40 0.512 39.327 6.223 1.00 0.61 ATOM 609 C PHE 40 3.936 40.036 9.618 1.00 0.61 ATOM 610 O PHE 40 5.030 39.515 9.722 1.00 0.61 ATOM 611 N ILE 41 3.705 41.262 10.089 1.00 0.63 ATOM 613 CA ILE 41 4.736 42.220 10.547 1.00 0.63 ATOM 615 CB ILE 41 4.473 43.568 9.824 1.00 0.63 ATOM 617 CG2 ILE 41 3.992 44.723 10.738 1.00 0.63 ATOM 621 CG1 ILE 41 5.682 44.015 8.993 1.00 0.63 ATOM 624 CD1 ILE 41 5.297 45.056 7.933 1.00 0.63 ATOM 628 C ILE 41 4.771 42.323 12.075 1.00 0.63 ATOM 629 O ILE 41 5.839 42.470 12.662 1.00 0.63 ATOM 630 N GLY 42 3.612 42.194 12.715 1.00 0.66 ATOM 632 CA GLY 42 3.409 42.315 14.170 1.00 0.66 ATOM 635 C GLY 42 3.516 41.012 14.939 1.00 0.66 ATOM 636 O GLY 42 3.196 40.983 16.127 1.00 0.66 ATOM 637 N ARG 43 3.945 39.922 14.280 1.00 0.63 ATOM 639 CA ARG 43 4.070 38.570 14.866 1.00 0.63 ATOM 641 CB ARG 43 4.652 37.643 13.763 1.00 0.63 ATOM 644 CG ARG 43 4.529 36.139 14.044 1.00 0.63 ATOM 647 CD ARG 43 3.117 35.599 13.781 1.00 0.63 ATOM 650 NE ARG 43 2.761 35.672 12.341 1.00 0.63 ATOM 652 CZ ARG 43 2.889 34.729 11.418 1.00 0.63 ATOM 653 NH1 ARG 43 3.483 33.590 11.665 1.00 0.63 ATOM 656 NH2 ARG 43 2.369 34.912 10.238 1.00 0.63 ATOM 659 C ARG 43 4.962 38.593 16.100 1.00 0.63 ATOM 660 O ARG 43 6.071 39.110 16.017 1.00 0.63 ATOM 661 N SER 44 4.531 38.016 17.206 1.00 0.73 ATOM 663 CA SER 44 5.344 37.889 18.423 1.00 0.73 ATOM 665 CB SER 44 4.436 37.908 19.657 1.00 0.73 ATOM 668 OG SER 44 5.230 38.087 20.813 1.00 0.73 ATOM 670 C SER 44 6.202 36.618 18.366 1.00 0.73 ATOM 671 O SER 44 5.961 35.728 17.564 1.00 0.73 ATOM 672 N LYS 45 7.238 36.550 19.220 1.00 0.77 ATOM 674 CA LYS 45 8.149 35.393 19.279 1.00 0.77 ATOM 676 CB LYS 45 9.533 35.845 19.787 1.00 0.77 ATOM 679 CG LYS 45 9.568 36.124 21.297 1.00 0.77 ATOM 682 CD LYS 45 10.901 36.750 21.747 1.00 0.77 ATOM 685 CE LYS 45 11.091 36.702 23.273 1.00 0.77 ATOM 688 NZ LYS 45 10.058 37.472 24.045 1.00 0.77 ATOM 692 C LYS 45 7.568 34.243 20.102 1.00 0.77 ATOM 693 O LYS 45 6.798 34.461 21.045 1.00 0.77 TER END