####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS407_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS407_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 13 - 41 4.94 12.16 LCS_AVERAGE: 56.66 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 1.87 12.12 LCS_AVERAGE: 21.54 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.44 12.17 LCS_AVERAGE: 14.93 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 9 3 4 5 5 5 6 6 6 6 6 8 8 8 18 22 25 25 27 28 28 LCS_GDT V 3 V 3 5 6 9 3 4 5 5 5 6 6 6 7 11 12 12 15 19 22 26 26 27 29 30 LCS_GDT Q 4 Q 4 5 6 9 3 4 5 5 5 6 6 6 10 10 14 15 20 23 25 26 29 31 31 32 LCS_GDT G 5 G 5 5 6 13 3 4 5 5 5 6 6 6 10 11 14 17 20 23 25 26 29 31 31 32 LCS_GDT P 6 P 6 5 6 18 3 4 5 5 6 6 7 8 10 11 13 15 20 22 24 26 29 31 31 32 LCS_GDT W 7 W 7 4 6 19 3 4 4 4 6 6 7 9 10 12 14 17 20 23 25 26 29 31 31 32 LCS_GDT V 8 V 8 3 5 19 1 3 4 4 6 6 7 10 10 14 17 19 20 23 25 26 29 31 31 32 LCS_GDT G 9 G 9 3 9 19 0 3 4 4 7 10 11 12 12 13 15 17 20 23 25 26 29 31 31 32 LCS_GDT S 10 S 10 8 10 19 3 7 8 10 10 10 11 12 12 13 17 19 20 23 25 26 29 31 31 32 LCS_GDT S 11 S 11 8 10 19 6 7 8 10 10 10 11 12 12 13 15 16 19 23 24 25 29 31 31 32 LCS_GDT Y 12 Y 12 8 10 19 6 7 8 10 10 10 11 12 12 13 15 16 19 20 22 23 26 28 31 32 LCS_GDT V 13 V 13 8 10 29 6 7 8 10 10 11 14 18 19 21 22 24 25 28 29 29 30 31 32 32 LCS_GDT A 14 A 14 8 10 29 6 7 8 10 10 13 15 18 19 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT E 15 E 15 8 10 29 6 7 8 10 10 10 11 12 12 13 15 16 18 23 29 29 30 31 32 32 LCS_GDT T 16 T 16 8 10 29 6 7 8 10 10 10 11 12 12 13 15 17 21 23 24 25 30 31 32 32 LCS_GDT G 17 G 17 8 10 29 3 6 8 10 10 10 11 12 14 17 21 24 26 28 29 29 30 31 32 32 LCS_GDT Q 18 Q 18 6 10 29 3 5 7 10 10 10 11 12 17 20 22 24 26 28 29 29 30 31 32 32 LCS_GDT N 19 N 19 6 11 29 3 5 8 10 11 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT W 20 W 20 10 12 29 8 10 11 13 13 14 15 19 20 21 21 24 26 28 29 29 30 31 32 32 LCS_GDT A 21 A 21 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT S 22 S 22 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT L 23 L 23 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT A 24 A 24 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT A 25 A 25 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT N 26 N 26 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT E 27 E 27 10 12 29 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT L 28 L 28 10 12 29 7 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT R 29 R 29 10 12 29 7 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT V 30 V 30 4 12 29 4 4 4 8 11 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT T 31 T 31 4 12 29 4 4 4 7 8 13 16 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT E 32 E 32 3 8 29 2 3 3 3 4 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT R 33 R 33 3 9 29 2 3 5 8 11 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT P 34 P 34 4 9 29 3 4 6 8 11 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT F 35 F 35 4 9 29 3 3 6 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT W 36 W 36 5 9 29 4 5 10 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT I 37 I 37 6 9 29 4 5 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT S 38 S 38 6 9 29 4 5 7 7 8 12 16 18 20 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT S 39 S 39 6 9 29 4 5 7 7 8 9 10 13 16 19 22 24 26 28 29 29 30 31 32 32 LCS_GDT F 40 F 40 6 9 29 4 5 7 7 8 9 10 11 12 17 20 23 26 28 29 29 30 31 32 32 LCS_GDT I 41 I 41 6 9 29 4 5 7 7 8 9 13 15 18 21 22 24 26 28 29 29 30 31 32 32 LCS_GDT G 42 G 42 6 9 27 4 5 7 7 8 9 10 12 15 17 20 23 25 28 29 29 30 31 32 32 LCS_GDT R 43 R 43 5 9 27 4 5 5 6 7 9 10 11 12 12 13 13 19 20 24 24 27 31 32 32 LCS_GDT S 44 S 44 5 9 15 4 5 5 6 7 9 10 11 12 12 13 17 18 21 22 22 27 30 32 32 LCS_GDT K 45 K 45 5 6 15 4 5 5 5 5 9 10 10 10 11 12 13 13 14 14 17 20 21 21 22 LCS_AVERAGE LCS_A: 31.04 ( 14.93 21.54 56.66 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 11 13 13 14 17 19 20 21 22 24 26 28 29 29 30 31 32 32 GDT PERCENT_AT 18.18 22.73 25.00 29.55 29.55 31.82 38.64 43.18 45.45 47.73 50.00 54.55 59.09 63.64 65.91 65.91 68.18 70.45 72.73 72.73 GDT RMS_LOCAL 0.34 0.44 0.89 1.20 1.20 1.68 2.46 2.70 2.97 3.12 3.43 3.81 4.35 4.66 4.88 4.88 5.08 5.40 5.67 5.67 GDT RMS_ALL_AT 12.27 12.17 12.45 12.52 12.52 12.35 11.70 11.76 11.63 11.38 11.49 11.55 12.08 12.18 12.23 12.23 12.36 12.58 12.78 12.78 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 16.270 0 0.035 0.046 17.966 0.000 0.000 - LGA V 3 V 3 16.163 0 0.050 1.067 18.029 0.000 0.000 16.571 LGA Q 4 Q 4 20.115 0 0.658 1.180 23.561 0.000 0.000 23.561 LGA G 5 G 5 20.190 0 0.139 0.139 20.190 0.000 0.000 - LGA P 6 P 6 20.385 0 0.673 0.531 20.836 0.000 0.000 20.291 LGA W 7 W 7 18.946 0 0.368 1.212 28.529 0.000 0.000 28.529 LGA V 8 V 8 14.315 0 0.664 0.812 16.194 0.000 0.000 12.411 LGA G 9 G 9 14.395 0 0.447 0.447 14.395 0.000 0.000 - LGA S 10 S 10 13.278 0 0.612 0.844 16.484 0.000 0.000 16.484 LGA S 11 S 11 14.006 0 0.058 0.055 17.000 0.000 0.000 17.000 LGA Y 12 Y 12 14.459 0 0.080 1.332 16.083 0.000 0.000 16.083 LGA V 13 V 13 8.014 0 0.057 1.083 10.208 0.000 0.000 7.802 LGA A 14 A 14 7.751 0 0.026 0.026 10.495 0.000 0.000 - LGA E 15 E 15 14.294 0 0.017 1.415 20.653 0.000 0.000 20.248 LGA T 16 T 16 14.269 0 0.142 0.963 15.762 0.000 0.000 12.573 LGA G 17 G 17 10.624 0 0.326 0.326 11.058 0.000 0.000 - LGA Q 18 Q 18 8.398 0 0.648 1.332 15.583 0.000 0.000 13.612 LGA N 19 N 19 3.179 0 0.045 1.096 6.389 22.273 13.409 6.190 LGA W 20 W 20 3.999 0 0.618 1.253 14.461 22.727 6.494 14.461 LGA A 21 A 21 3.110 0 0.048 0.045 3.616 23.636 21.091 - LGA S 22 S 22 3.179 0 0.031 0.055 3.929 25.455 20.606 3.929 LGA L 23 L 23 1.811 0 0.024 0.342 3.266 59.091 42.273 3.130 LGA A 24 A 24 0.923 0 0.052 0.054 1.505 82.273 76.000 - LGA A 25 A 25 1.405 0 0.054 0.052 2.369 55.000 51.636 - LGA N 26 N 26 2.693 0 0.018 0.919 3.364 27.727 33.409 3.364 LGA E 27 E 27 2.270 0 0.104 0.896 3.511 34.545 47.879 2.535 LGA L 28 L 28 1.881 0 0.221 1.293 5.230 41.818 40.227 1.613 LGA R 29 R 29 3.121 0 0.328 1.454 12.058 25.455 9.752 11.599 LGA V 30 V 30 2.391 0 0.588 0.933 6.154 25.000 25.195 3.879 LGA T 31 T 31 4.082 0 0.707 0.586 7.548 21.818 12.468 5.032 LGA E 32 E 32 3.679 0 0.666 1.061 9.056 10.000 4.444 6.653 LGA R 33 R 33 3.573 0 0.113 1.415 14.465 15.455 5.620 14.465 LGA P 34 P 34 2.308 0 0.029 0.115 3.530 51.818 38.961 3.530 LGA F 35 F 35 2.114 0 0.141 0.214 5.027 47.727 25.455 4.724 LGA W 36 W 36 1.565 0 0.650 1.159 10.502 40.909 20.000 10.502 LGA I 37 I 37 0.637 0 0.091 1.720 4.450 48.182 33.636 4.450 LGA S 38 S 38 6.843 0 0.089 0.629 10.216 1.364 0.909 10.216 LGA S 39 S 39 10.475 0 0.188 0.289 13.711 0.000 0.000 9.028 LGA F 40 F 40 11.389 0 0.066 0.904 13.915 0.000 0.000 8.783 LGA I 41 I 41 10.591 0 0.049 1.107 14.602 0.000 0.000 7.163 LGA G 42 G 42 17.248 0 0.198 0.198 20.350 0.000 0.000 - LGA R 43 R 43 19.873 0 0.097 1.029 28.549 0.000 0.000 28.549 LGA S 44 S 44 20.450 0 0.109 0.632 24.542 0.000 0.000 20.139 LGA K 45 K 45 24.785 0 0.643 0.860 31.475 0.000 0.000 31.475 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.155 11.165 12.339 15.506 12.033 4.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.70 40.341 35.588 0.677 LGA_LOCAL RMSD: 2.705 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.759 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.155 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.834833 * X + -0.208526 * Y + 0.509481 * Z + 12.070219 Y_new = 0.369935 * X + 0.897875 * Y + -0.238681 * Z + 22.050716 Z_new = -0.407679 * X + 0.387734 * Y + 0.826717 * Z + 3.493079 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.417121 0.419911 0.438545 [DEG: 23.8993 24.0591 25.1268 ] ZXZ: 1.132682 0.597550 -0.810469 [DEG: 64.8979 34.2371 -46.4365 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS407_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS407_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.70 35.588 11.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS407_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 11.142 39.094 30.163 1.00 7.20 N ATOM 14 CA ALA 2 10.972 37.740 29.605 1.00 7.20 C ATOM 15 CB ALA 2 10.775 36.728 30.731 1.00 7.20 C ATOM 16 C ALA 2 9.792 37.679 28.626 1.00 7.20 C ATOM 17 O ALA 2 8.814 38.418 28.788 1.00 7.20 O ATOM 18 N VAL 3 9.900 36.796 27.621 1.00 8.29 N ATOM 20 CA VAL 3 8.874 36.587 26.580 1.00 8.29 C ATOM 21 CB VAL 3 9.532 36.574 25.121 1.00 8.29 C ATOM 22 CG1 VAL 3 10.490 35.381 24.922 1.00 8.29 C ATOM 23 CG2 VAL 3 8.466 36.650 24.014 1.00 8.29 C ATOM 24 C VAL 3 8.019 35.324 26.878 1.00 8.29 C ATOM 25 O VAL 3 8.539 34.338 27.415 1.00 8.29 O ATOM 26 N GLN 4 6.728 35.387 26.526 1.00 8.44 N ATOM 28 CA GLN 4 5.761 34.291 26.729 1.00 8.44 C ATOM 29 CB GLN 4 4.472 34.804 27.430 1.00 8.44 C ATOM 30 CG GLN 4 3.812 36.110 26.893 1.00 8.44 C ATOM 31 CD GLN 4 4.248 37.367 27.641 1.00 8.44 C ATOM 32 OE1 GLN 4 3.612 37.776 28.614 1.00 8.44 O ATOM 33 NE2 GLN 4 5.336 37.980 27.187 1.00 8.44 N ATOM 36 C GLN 4 5.420 33.526 25.437 1.00 8.44 C ATOM 37 O GLN 4 5.217 32.307 25.471 1.00 8.44 O ATOM 38 N GLY 5 5.363 34.257 24.319 1.00 5.85 N ATOM 40 CA GLY 5 5.052 33.667 23.024 1.00 5.85 C ATOM 41 C GLY 5 5.059 34.696 21.895 1.00 5.85 C ATOM 42 O GLY 5 5.736 35.718 22.064 1.00 5.85 O ATOM 43 N PRO 6 4.360 34.481 20.737 1.00 4.34 N ATOM 44 CD PRO 6 4.244 35.629 19.809 1.00 4.34 C ATOM 45 CA PRO 6 3.506 33.366 20.267 1.00 4.34 C ATOM 46 CB PRO 6 2.825 33.951 19.021 1.00 4.34 C ATOM 47 CG PRO 6 3.802 34.986 18.523 1.00 4.34 C ATOM 48 C PRO 6 4.217 32.020 19.964 1.00 4.34 C ATOM 49 O PRO 6 5.421 32.006 19.684 1.00 4.34 O ATOM 50 N TRP 7 3.453 30.920 20.026 1.00 4.42 N ATOM 52 CA TRP 7 3.947 29.554 19.771 1.00 4.42 C ATOM 53 CB TRP 7 3.520 28.591 20.913 1.00 4.42 C ATOM 54 CG TRP 7 2.024 28.617 21.349 1.00 4.42 C ATOM 55 CD2 TRP 7 1.405 29.488 22.323 1.00 4.42 C ATOM 56 CE2 TRP 7 0.033 29.114 22.406 1.00 4.42 C ATOM 57 CE3 TRP 7 1.873 30.547 23.135 1.00 4.42 C ATOM 58 CD1 TRP 7 1.025 27.784 20.903 1.00 4.42 C ATOM 59 NE1 TRP 7 -0.161 28.078 21.531 1.00 4.42 N ATOM 61 CZ2 TRP 7 -0.883 29.761 23.269 1.00 4.42 C ATOM 62 CZ3 TRP 7 0.958 31.197 24.000 1.00 4.42 C ATOM 63 CH2 TRP 7 -0.407 30.795 24.055 1.00 4.42 C ATOM 64 C TRP 7 3.519 29.000 18.398 1.00 4.42 C ATOM 65 O TRP 7 2.394 29.257 17.950 1.00 4.42 O ATOM 66 N VAL 8 4.428 28.256 17.751 1.00 3.89 N ATOM 68 CA VAL 8 4.208 27.635 16.426 1.00 3.89 C ATOM 69 CB VAL 8 5.369 27.990 15.400 1.00 3.89 C ATOM 70 CG1 VAL 8 4.890 27.817 13.953 1.00 3.89 C ATOM 71 CG2 VAL 8 5.868 29.422 15.609 1.00 3.89 C ATOM 72 C VAL 8 4.110 26.105 16.618 1.00 3.89 C ATOM 73 O VAL 8 4.780 25.545 17.496 1.00 3.89 O ATOM 74 N GLY 9 3.261 25.457 15.813 1.00 3.58 N ATOM 76 CA GLY 9 3.077 24.012 15.897 1.00 3.58 C ATOM 77 C GLY 9 2.089 23.441 14.894 1.00 3.58 C ATOM 78 O GLY 9 1.625 24.156 13.998 1.00 3.58 O ATOM 79 N SER 10 1.772 22.147 15.064 1.00 3.59 N ATOM 81 CA SER 10 0.841 21.335 14.236 1.00 3.59 C ATOM 82 CB SER 10 -0.636 21.680 14.541 1.00 3.59 C ATOM 83 OG SER 10 -1.533 20.762 13.932 1.00 3.59 O ATOM 85 C SER 10 1.107 21.309 12.711 1.00 3.59 C ATOM 86 O SER 10 1.142 22.361 12.059 1.00 3.59 O ATOM 87 N SER 11 1.351 20.100 12.185 1.00 3.68 N ATOM 89 CA SER 11 1.626 19.822 10.759 1.00 3.68 C ATOM 90 OG SER 11 2.706 18.188 9.292 1.00 3.68 O ATOM 92 C SER 11 0.427 20.007 9.809 1.00 3.68 C ATOM 93 O SER 11 0.605 20.489 8.685 1.00 3.68 O ATOM 94 CB SER 11 2.204 18.411 10.601 1.00 3.68 C ATOM 95 N TYR 12 -0.776 19.641 10.281 1.00 3.74 N ATOM 97 CA TYR 12 -2.045 19.716 9.519 1.00 3.74 C ATOM 98 CB TYR 12 -3.207 19.145 10.376 1.00 3.74 C ATOM 99 CG TYR 12 -4.445 18.618 9.628 1.00 3.74 C ATOM 100 CD1 TYR 12 -4.537 17.260 9.232 1.00 3.74 C ATOM 101 CE1 TYR 12 -5.693 16.761 8.569 1.00 3.74 C ATOM 102 CD2 TYR 12 -5.543 19.466 9.342 1.00 3.74 C ATOM 103 CE2 TYR 12 -6.703 18.975 8.680 1.00 3.74 C ATOM 104 CZ TYR 12 -6.767 17.625 8.300 1.00 3.74 C ATOM 105 OH TYR 12 -7.887 17.143 7.660 1.00 3.74 O ATOM 107 C TYR 12 -2.378 21.148 9.055 1.00 3.74 C ATOM 108 O TYR 12 -2.724 21.352 7.883 1.00 3.74 O ATOM 109 N VAL 13 -2.231 22.120 9.965 1.00 3.55 N ATOM 111 CA VAL 13 -2.483 23.549 9.693 1.00 3.55 C ATOM 112 CB VAL 13 -2.589 24.409 11.014 1.00 3.55 C ATOM 113 CG1 VAL 13 -3.871 24.054 11.756 1.00 3.55 C ATOM 114 CG2 VAL 13 -1.377 24.207 11.940 1.00 3.55 C ATOM 115 C VAL 13 -1.438 24.118 8.707 1.00 3.55 C ATOM 116 O VAL 13 -1.773 24.944 7.847 1.00 3.55 O ATOM 117 N ALA 14 -0.188 23.644 8.847 1.00 3.44 N ATOM 119 CA ALA 14 0.962 24.028 8.003 1.00 3.44 C ATOM 120 CB ALA 14 2.256 23.496 8.606 1.00 3.44 C ATOM 121 C ALA 14 0.793 23.506 6.566 1.00 3.44 C ATOM 122 O ALA 14 1.162 24.194 5.606 1.00 3.44 O ATOM 123 N GLU 15 0.232 22.292 6.445 1.00 3.35 N ATOM 125 CA GLU 15 -0.046 21.614 5.160 1.00 3.35 C ATOM 126 CB GLU 15 -0.417 20.141 5.385 1.00 3.35 C ATOM 127 CG GLU 15 0.752 19.237 5.761 1.00 3.35 C ATOM 128 CD GLU 15 0.333 17.794 5.972 1.00 3.35 C ATOM 129 OE1 GLU 15 -0.011 17.435 7.118 1.00 3.35 O ATOM 130 OE2 GLU 15 0.351 17.018 4.993 1.00 3.35 O ATOM 131 C GLU 15 -1.163 22.318 4.369 1.00 3.35 C ATOM 132 O GLU 15 -1.062 22.453 3.143 1.00 3.35 O ATOM 133 N THR 16 -2.214 22.756 5.083 1.00 3.16 N ATOM 135 CA THR 16 -3.379 23.467 4.509 1.00 3.16 C ATOM 136 CB THR 16 -4.565 23.544 5.532 1.00 3.16 C ATOM 137 OG1 THR 16 -4.573 22.362 6.341 1.00 3.16 O ATOM 139 CG2 THR 16 -5.920 23.630 4.808 1.00 3.16 C ATOM 140 C THR 16 -2.997 24.879 4.004 1.00 3.16 C ATOM 141 O THR 16 -3.432 25.286 2.921 1.00 3.16 O ATOM 142 N GLY 17 -2.187 25.599 4.792 1.00 2.98 N ATOM 144 CA GLY 17 -1.738 26.941 4.433 1.00 2.98 C ATOM 145 C GLY 17 -2.463 28.088 5.125 1.00 2.98 C ATOM 146 O GLY 17 -1.836 28.865 5.855 1.00 2.98 O ATOM 147 N GLN 18 -3.779 28.181 4.891 1.00 3.27 N ATOM 149 CA GLN 18 -4.670 29.219 5.449 1.00 3.27 C ATOM 150 CB GLN 18 -6.028 29.205 4.732 1.00 3.27 C ATOM 151 CG GLN 18 -5.989 29.675 3.281 1.00 3.27 C ATOM 152 CD GLN 18 -7.355 29.642 2.622 1.00 3.27 C ATOM 153 OE1 GLN 18 -7.741 28.641 2.018 1.00 3.27 O ATOM 154 NE2 GLN 18 -8.094 30.741 2.734 1.00 3.27 N ATOM 157 C GLN 18 -4.890 29.141 6.971 1.00 3.27 C ATOM 158 O GLN 18 -4.964 30.182 7.639 1.00 3.27 O ATOM 159 N ASN 19 -4.973 27.911 7.499 1.00 2.91 N ATOM 161 CA ASN 19 -5.186 27.632 8.936 1.00 2.91 C ATOM 162 CB ASN 19 -5.521 26.148 9.153 1.00 2.91 C ATOM 163 CG ASN 19 -6.878 25.757 8.579 1.00 2.91 C ATOM 164 OD1 ASN 19 -7.893 25.788 9.277 1.00 2.91 O ATOM 165 ND2 ASN 19 -6.897 25.372 7.305 1.00 2.91 N ATOM 168 C ASN 19 -3.997 28.045 9.826 1.00 2.91 C ATOM 169 O ASN 19 -4.204 28.607 10.909 1.00 2.91 O ATOM 170 N TRP 20 -2.770 27.792 9.343 1.00 2.88 N ATOM 172 CA TRP 20 -1.509 28.131 10.039 1.00 2.88 C ATOM 173 CB TRP 20 -0.308 27.435 9.339 1.00 2.88 C ATOM 174 CG TRP 20 1.091 27.578 10.008 1.00 2.88 C ATOM 175 CD2 TRP 20 2.059 28.631 9.801 1.00 2.88 C ATOM 176 CE2 TRP 20 3.192 28.322 10.603 1.00 2.88 C ATOM 177 CE3 TRP 20 2.081 29.808 9.015 1.00 2.88 C ATOM 178 CD1 TRP 20 1.671 26.707 10.900 1.00 2.88 C ATOM 179 NE1 TRP 20 2.923 27.149 11.257 1.00 2.88 N ATOM 181 CZ2 TRP 20 4.343 29.146 10.648 1.00 2.88 C ATOM 182 CZ3 TRP 20 3.230 30.634 9.058 1.00 2.88 C ATOM 183 CH2 TRP 20 4.344 30.292 9.873 1.00 2.88 C ATOM 184 C TRP 20 -1.317 29.665 10.102 1.00 2.88 C ATOM 185 O TRP 20 -0.900 30.193 11.141 1.00 2.88 O ATOM 186 N ALA 21 -1.649 30.352 8.998 1.00 3.16 N ATOM 188 CA ALA 21 -1.553 31.822 8.865 1.00 3.16 C ATOM 189 CB ALA 21 -1.730 32.236 7.408 1.00 3.16 C ATOM 190 C ALA 21 -2.569 32.558 9.755 1.00 3.16 C ATOM 191 O ALA 21 -2.227 33.568 10.383 1.00 3.16 O ATOM 192 N SER 22 -3.801 32.025 9.810 1.00 3.64 N ATOM 194 CA SER 22 -4.913 32.571 10.616 1.00 3.64 C ATOM 195 CB SER 22 -6.242 31.911 10.220 1.00 3.64 C ATOM 196 OG SER 22 -6.180 30.499 10.338 1.00 3.64 O ATOM 198 C SER 22 -4.671 32.431 12.132 1.00 3.64 C ATOM 199 O SER 22 -4.902 33.385 12.885 1.00 3.64 O ATOM 200 N LEU 23 -4.199 31.246 12.555 1.00 3.77 N ATOM 202 CA LEU 23 -3.885 30.936 13.965 1.00 3.77 C ATOM 203 CB LEU 23 -3.670 29.423 14.171 1.00 3.77 C ATOM 204 CG LEU 23 -4.848 28.430 14.191 1.00 3.77 C ATOM 205 CD1 LEU 23 -4.353 27.087 13.691 1.00 3.77 C ATOM 206 CD2 LEU 23 -5.483 28.273 15.587 1.00 3.77 C ATOM 207 C LEU 23 -2.668 31.719 14.480 1.00 3.77 C ATOM 208 O LEU 23 -2.670 32.176 15.628 1.00 3.77 O ATOM 209 N ALA 24 -1.663 31.899 13.610 1.00 3.70 N ATOM 211 CA ALA 24 -0.423 32.640 13.916 1.00 3.70 C ATOM 212 CB ALA 24 0.596 32.454 12.796 1.00 3.70 C ATOM 213 C ALA 24 -0.731 34.132 14.117 1.00 3.70 C ATOM 214 O ALA 24 -0.302 34.721 15.115 1.00 3.70 O ATOM 215 N ALA 25 -1.558 34.690 13.216 1.00 3.66 N ATOM 217 CA ALA 25 -1.999 36.100 13.232 1.00 3.66 C ATOM 218 CB ALA 25 -2.772 36.424 11.959 1.00 3.66 C ATOM 219 C ALA 25 -2.868 36.376 14.469 1.00 3.66 C ATOM 220 O ALA 25 -2.796 37.462 15.055 1.00 3.66 O ATOM 221 N ASN 26 -3.691 35.381 14.834 1.00 4.02 N ATOM 223 CA ASN 26 -4.586 35.414 16.009 1.00 4.02 C ATOM 224 CB ASN 26 -5.572 34.231 15.958 1.00 4.02 C ATOM 225 CG ASN 26 -6.889 34.515 16.682 1.00 4.02 C ATOM 226 OD1 ASN 26 -7.850 35.002 16.083 1.00 4.02 O ATOM 227 ND2 ASN 26 -6.939 34.195 17.973 1.00 4.02 N ATOM 230 C ASN 26 -3.747 35.369 17.308 1.00 4.02 C ATOM 231 O ASN 26 -4.098 36.026 18.296 1.00 4.02 O ATOM 232 N GLU 27 -2.654 34.589 17.278 1.00 3.59 N ATOM 234 CA GLU 27 -1.718 34.412 18.409 1.00 3.59 C ATOM 235 CG GLU 27 -1.439 31.860 18.517 1.00 3.59 C ATOM 236 CD GLU 27 -0.503 30.690 18.277 1.00 3.59 C ATOM 237 OE1 GLU 27 0.232 30.312 19.214 1.00 3.59 O ATOM 238 OE2 GLU 27 -0.505 30.145 17.153 1.00 3.59 O ATOM 239 C GLU 27 -0.875 35.645 18.780 1.00 3.59 C ATOM 240 O GLU 27 -0.781 35.974 19.969 1.00 3.59 O ATOM 241 CB GLU 27 -0.802 33.203 18.179 1.00 3.59 C ATOM 242 N LEU 28 -0.273 36.315 17.782 1.00 3.69 N ATOM 244 CA LEU 28 0.546 37.525 18.019 1.00 3.69 C ATOM 245 CB LEU 28 1.472 37.882 16.817 1.00 3.69 C ATOM 246 CG LEU 28 1.301 38.188 15.298 1.00 3.69 C ATOM 247 CD1 LEU 28 1.529 36.943 14.460 1.00 3.69 C ATOM 248 CD2 LEU 28 0.003 38.916 14.912 1.00 3.69 C ATOM 249 C LEU 28 -0.270 38.749 18.474 1.00 3.69 C ATOM 250 O LEU 28 0.196 39.523 19.315 1.00 3.69 O ATOM 251 N ARG 29 -1.483 38.897 17.910 1.00 4.12 N ATOM 253 CA ARG 29 -2.470 39.984 18.174 1.00 4.12 C ATOM 254 CB ARG 29 -2.966 39.980 19.638 1.00 4.12 C ATOM 255 CG ARG 29 -3.811 38.765 20.024 1.00 4.12 C ATOM 256 CD ARG 29 -4.272 38.818 21.480 1.00 4.12 C ATOM 257 NE ARG 29 -5.269 39.867 21.724 1.00 4.12 N ATOM 259 CZ ARG 29 -5.837 40.126 22.903 1.00 4.12 C ATOM 260 NH1 ARG 29 -6.729 41.103 22.999 1.00 4.12 N ATOM 263 NH2 ARG 29 -5.527 39.421 23.987 1.00 4.12 N ATOM 266 C ARG 29 -2.076 41.414 17.756 1.00 4.12 C ATOM 267 O ARG 29 -2.948 42.201 17.368 1.00 4.12 O ATOM 268 N VAL 30 -0.764 41.713 17.790 1.00 4.82 N ATOM 270 CA VAL 30 -0.123 43.018 17.448 1.00 4.82 C ATOM 271 CB VAL 30 0.465 43.066 15.961 1.00 4.82 C ATOM 272 CG1 VAL 30 1.671 42.144 15.848 1.00 4.82 C ATOM 273 CG2 VAL 30 -0.590 42.690 14.901 1.00 4.82 C ATOM 274 C VAL 30 -0.839 44.345 17.821 1.00 4.82 C ATOM 275 O VAL 30 -0.347 45.083 18.683 1.00 4.82 O ATOM 276 N THR 31 -1.980 44.626 17.171 1.00 5.06 N ATOM 278 CA THR 31 -2.796 45.838 17.398 1.00 5.06 C ATOM 279 CB THR 31 -2.833 46.763 16.131 1.00 5.06 C ATOM 280 OG1 THR 31 -3.225 46.000 14.983 1.00 5.06 O ATOM 282 CG2 THR 31 -1.468 47.397 15.883 1.00 5.06 C ATOM 283 C THR 31 -4.235 45.442 17.784 1.00 5.06 C ATOM 284 O THR 31 -4.621 44.281 17.608 1.00 5.06 O ATOM 285 N GLU 32 -5.013 46.408 18.301 1.00 7.17 N ATOM 287 CA GLU 32 -6.420 46.218 18.719 1.00 7.17 C ATOM 288 CB GLU 32 -6.836 47.296 19.754 1.00 7.17 C ATOM 289 CG GLU 32 -6.501 48.766 19.415 1.00 7.17 C ATOM 290 CD GLU 32 -6.953 49.730 20.495 1.00 7.17 C ATOM 291 OE1 GLU 32 -6.160 50.005 21.419 1.00 7.17 O ATOM 292 OE2 GLU 32 -8.101 50.217 20.418 1.00 7.17 O ATOM 293 C GLU 32 -7.409 46.149 17.526 1.00 7.17 C ATOM 294 O GLU 32 -8.608 45.889 17.708 1.00 7.17 O ATOM 295 N ARG 33 -6.862 46.338 16.315 1.00 6.09 N ATOM 297 CA ARG 33 -7.602 46.314 15.038 1.00 6.09 C ATOM 298 CB ARG 33 -7.097 47.437 14.118 1.00 6.09 C ATOM 299 CG ARG 33 -7.451 48.853 14.578 1.00 6.09 C ATOM 300 CD ARG 33 -6.921 49.922 13.624 1.00 6.09 C ATOM 301 NE ARG 33 -7.617 49.929 12.332 1.00 6.09 N ATOM 303 CZ ARG 33 -7.352 50.757 11.321 1.00 6.09 C ATOM 304 NH1 ARG 33 -8.053 50.665 10.199 1.00 6.09 N ATOM 307 NH2 ARG 33 -6.395 51.677 11.416 1.00 6.09 N ATOM 310 C ARG 33 -7.430 44.940 14.338 1.00 6.09 C ATOM 311 O ARG 33 -6.431 44.261 14.602 1.00 6.09 O ATOM 312 N PRO 34 -8.392 44.505 13.454 1.00 5.81 N ATOM 313 CD PRO 34 -9.727 45.093 13.180 1.00 5.81 C ATOM 314 CA PRO 34 -8.291 43.206 12.748 1.00 5.81 C ATOM 315 CB PRO 34 -9.571 43.178 11.909 1.00 5.81 C ATOM 316 CG PRO 34 -10.536 43.890 12.767 1.00 5.81 C ATOM 317 C PRO 34 -7.036 43.002 11.865 1.00 5.81 C ATOM 318 O PRO 34 -6.286 43.956 11.627 1.00 5.81 O ATOM 319 N PHE 35 -6.839 41.765 11.380 1.00 7.38 N ATOM 321 CA PHE 35 -5.696 41.359 10.532 1.00 7.38 C ATOM 322 CB PHE 35 -5.604 39.804 10.452 1.00 7.38 C ATOM 323 CG PHE 35 -6.915 39.089 10.095 1.00 7.38 C ATOM 324 CD1 PHE 35 -7.246 38.813 8.745 1.00 7.38 C ATOM 325 CD2 PHE 35 -7.804 38.657 11.108 1.00 7.38 C ATOM 326 CE1 PHE 35 -8.441 38.118 8.409 1.00 7.38 C ATOM 327 CE2 PHE 35 -9.002 37.961 10.788 1.00 7.38 C ATOM 328 CZ PHE 35 -9.321 37.691 9.434 1.00 7.38 C ATOM 329 C PHE 35 -5.629 41.991 9.121 1.00 7.38 C ATOM 330 O PHE 35 -6.612 41.941 8.368 1.00 7.38 O ATOM 331 N TRP 36 -4.476 42.600 8.802 1.00 7.18 N ATOM 333 CA TRP 36 -4.221 43.262 7.509 1.00 7.18 C ATOM 334 CB TRP 36 -4.106 44.804 7.703 1.00 7.18 C ATOM 335 CG TRP 36 -2.892 45.344 8.519 1.00 7.18 C ATOM 336 CD2 TRP 36 -2.620 45.173 9.929 1.00 7.18 C ATOM 337 CE2 TRP 36 -1.405 45.864 10.204 1.00 7.18 C ATOM 338 CE3 TRP 36 -3.279 44.506 10.986 1.00 7.18 C ATOM 339 CD1 TRP 36 -1.863 46.105 8.028 1.00 7.18 C ATOM 340 NE1 TRP 36 -0.975 46.416 9.028 1.00 7.18 N ATOM 342 CZ2 TRP 36 -0.829 45.908 11.496 1.00 7.18 C ATOM 343 CZ3 TRP 36 -2.705 44.548 12.280 1.00 7.18 C ATOM 344 CH2 TRP 36 -1.488 45.249 12.516 1.00 7.18 C ATOM 345 C TRP 36 -2.974 42.689 6.798 1.00 7.18 C ATOM 346 O TRP 36 -2.725 43.010 5.627 1.00 7.18 O ATOM 347 N ILE 37 -2.239 41.808 7.496 1.00 6.25 N ATOM 349 CA ILE 37 -0.999 41.166 6.996 1.00 6.25 C ATOM 350 CB ILE 37 -0.226 40.349 8.133 1.00 6.25 C ATOM 351 CG2 ILE 37 0.743 41.284 8.878 1.00 6.25 C ATOM 352 CG1 ILE 37 -1.163 39.463 9.014 1.00 6.25 C ATOM 353 CD1 ILE 37 -1.935 40.122 10.216 1.00 6.25 C ATOM 354 C ILE 37 -1.119 40.316 5.707 1.00 6.25 C ATOM 355 O ILE 37 -0.230 40.366 4.846 1.00 6.25 O ATOM 356 N SER 38 -2.227 39.573 5.589 1.00 6.87 N ATOM 358 CA SER 38 -2.538 38.694 4.443 1.00 6.87 C ATOM 359 CB SER 38 -3.692 37.750 4.810 1.00 6.87 C ATOM 360 OG SER 38 -3.873 36.727 3.841 1.00 6.87 O ATOM 362 C SER 38 -2.846 39.405 3.104 1.00 6.87 C ATOM 363 O SER 38 -2.455 38.908 2.041 1.00 6.87 O ATOM 364 N SER 39 -3.531 40.556 3.176 1.00 6.53 N ATOM 366 CA SER 39 -3.954 41.349 2.000 1.00 6.53 C ATOM 367 CB SER 39 -5.036 42.355 2.414 1.00 6.53 C ATOM 368 OG SER 39 -4.578 43.204 3.453 1.00 6.53 O ATOM 370 C SER 39 -2.909 42.057 1.108 1.00 6.53 C ATOM 371 O SER 39 -2.988 41.932 -0.120 1.00 6.53 O ATOM 372 N PHE 40 -1.952 42.785 1.705 1.00 6.24 N ATOM 374 CA PHE 40 -0.905 43.512 0.949 1.00 6.24 C ATOM 375 CB PHE 40 -0.280 44.683 1.769 1.00 6.24 C ATOM 376 CG PHE 40 0.279 44.312 3.146 1.00 6.24 C ATOM 377 CD1 PHE 40 -0.427 44.663 4.317 1.00 6.24 C ATOM 378 CD2 PHE 40 1.549 43.695 3.283 1.00 6.24 C ATOM 379 CE1 PHE 40 0.117 44.414 5.606 1.00 6.24 C ATOM 380 CE2 PHE 40 2.106 43.439 4.565 1.00 6.24 C ATOM 381 CZ PHE 40 1.388 43.800 5.729 1.00 6.24 C ATOM 382 C PHE 40 0.182 42.692 0.218 1.00 6.24 C ATOM 383 O PHE 40 0.601 43.070 -0.883 1.00 6.24 O ATOM 384 N ILE 41 0.613 41.582 0.835 1.00 5.38 N ATOM 386 CA ILE 41 1.656 40.680 0.294 1.00 5.38 C ATOM 387 CB ILE 41 2.255 39.721 1.402 1.00 5.38 C ATOM 388 CG2 ILE 41 3.221 40.516 2.294 1.00 5.38 C ATOM 389 CG1 ILE 41 1.145 39.028 2.230 1.00 5.38 C ATOM 390 CD1 ILE 41 1.459 37.590 2.665 1.00 5.38 C ATOM 391 C ILE 41 1.288 39.885 -0.981 1.00 5.38 C ATOM 392 O ILE 41 0.171 39.365 -1.096 1.00 5.38 O ATOM 393 N GLY 42 2.232 39.835 -1.926 1.00 5.13 N ATOM 395 CA GLY 42 2.040 39.129 -3.185 1.00 5.13 C ATOM 396 C GLY 42 3.306 39.136 -4.025 1.00 5.13 C ATOM 397 O GLY 42 3.661 38.109 -4.617 1.00 5.13 O ATOM 398 N ARG 43 3.976 40.294 -4.067 1.00 5.08 N ATOM 400 CA ARG 43 5.226 40.499 -4.819 1.00 5.08 C ATOM 401 CB ARG 43 5.124 41.731 -5.736 1.00 5.08 C ATOM 402 CG ARG 43 4.154 41.577 -6.910 1.00 5.08 C ATOM 403 CD ARG 43 4.097 42.831 -7.781 1.00 5.08 C ATOM 404 NE ARG 43 5.331 43.054 -8.542 1.00 5.08 N ATOM 406 CZ ARG 43 5.545 44.071 -9.378 1.00 5.08 C ATOM 407 NH1 ARG 43 6.708 44.163 -10.010 1.00 5.08 N ATOM 410 NH2 ARG 43 4.614 44.995 -9.591 1.00 5.08 N ATOM 413 C ARG 43 6.431 40.641 -3.870 1.00 5.08 C ATOM 414 O ARG 43 6.388 41.440 -2.923 1.00 5.08 O ATOM 415 N SER 44 7.474 39.834 -4.114 1.00 5.12 N ATOM 417 CA SER 44 8.713 39.817 -3.314 1.00 5.12 C ATOM 418 CB SER 44 8.849 38.478 -2.559 1.00 5.12 C ATOM 419 OG SER 44 8.959 37.387 -3.457 1.00 5.12 O ATOM 421 C SER 44 9.958 40.032 -4.189 1.00 5.12 C ATOM 422 O SER 44 9.855 40.090 -5.420 1.00 5.12 O ATOM 423 N LYS 45 11.118 40.165 -3.529 1.00 4.37 N ATOM 425 CA LYS 45 12.436 40.337 -4.166 1.00 4.37 C ATOM 426 CG LYS 45 12.427 42.914 -4.214 1.00 4.37 C ATOM 427 CD LYS 45 13.154 44.160 -3.719 1.00 4.37 C ATOM 428 CE LYS 45 12.492 45.446 -4.207 1.00 4.37 C ATOM 429 NZ LYS 45 12.621 45.665 -5.679 1.00 4.37 N ATOM 433 C LYS 45 13.286 39.140 -3.718 1.00 4.37 C ATOM 434 O LYS 45 14.209 38.726 -4.431 1.00 4.37 O ATOM 435 CB LYS 45 13.104 41.642 -3.713 1.00 4.37 C TER END