####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS407_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS407_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 17 - 42 4.75 12.51 LONGEST_CONTINUOUS_SEGMENT: 26 18 - 43 4.70 12.71 LONGEST_CONTINUOUS_SEGMENT: 26 19 - 44 4.74 13.14 LCS_AVERAGE: 54.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.81 13.35 LCS_AVERAGE: 22.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.72 12.74 LCS_AVERAGE: 14.10 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 9 3 3 3 3 4 6 9 11 12 15 17 17 21 24 26 27 28 30 31 32 LCS_GDT V 3 V 3 4 5 20 3 4 4 4 4 5 5 5 5 6 10 17 21 22 23 27 28 30 31 31 LCS_GDT Q 4 Q 4 4 5 22 3 4 4 4 4 5 7 10 13 15 17 20 21 24 26 27 28 30 31 31 LCS_GDT G 5 G 5 4 5 22 1 4 4 4 5 8 10 12 14 16 17 20 21 24 26 27 28 30 31 31 LCS_GDT P 6 P 6 4 5 22 0 4 6 6 6 8 10 12 14 16 17 20 21 24 26 27 28 30 31 31 LCS_GDT W 7 W 7 4 5 22 3 3 6 6 6 8 10 12 14 16 17 20 21 24 26 27 28 30 31 32 LCS_GDT V 8 V 8 4 5 22 3 4 6 6 7 8 9 11 14 16 17 20 21 24 26 28 28 30 31 32 LCS_GDT G 9 G 9 4 11 22 3 4 6 6 7 10 12 16 18 20 21 23 23 25 26 28 28 30 31 32 LCS_GDT S 10 S 10 8 11 22 7 7 9 10 10 10 12 16 19 20 21 23 24 25 26 28 28 30 31 32 LCS_GDT S 11 S 11 8 11 22 7 7 9 10 10 10 12 12 14 16 17 20 24 25 26 28 28 30 31 32 LCS_GDT Y 12 Y 12 8 11 22 7 7 9 10 10 10 12 12 13 16 17 20 21 24 26 28 28 30 31 32 LCS_GDT V 13 V 13 8 11 22 7 7 9 10 10 10 12 17 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT A 14 A 14 8 11 22 7 7 9 10 10 10 12 13 17 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT E 15 E 15 8 11 22 7 7 9 10 10 10 12 12 14 16 17 19 21 23 24 28 29 30 31 32 LCS_GDT T 16 T 16 8 11 23 7 7 9 10 10 10 12 12 14 16 17 20 21 24 26 28 29 30 31 32 LCS_GDT G 17 G 17 8 11 26 3 6 9 10 10 10 12 12 14 16 17 21 22 24 26 28 29 30 31 32 LCS_GDT Q 18 Q 18 6 11 26 3 5 7 10 10 10 12 12 14 17 20 23 26 27 27 28 29 30 31 32 LCS_GDT N 19 N 19 6 11 26 3 3 9 10 10 10 14 17 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT W 20 W 20 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT A 21 A 21 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT S 22 S 22 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT L 23 L 23 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT A 24 A 24 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT A 25 A 25 10 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT N 26 N 26 10 14 26 6 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT E 27 E 27 10 14 26 5 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT L 28 L 28 10 14 26 4 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT R 29 R 29 10 14 26 3 8 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT V 30 V 30 3 14 26 3 3 4 4 6 13 17 18 19 20 22 23 24 27 27 28 29 30 31 32 LCS_GDT T 31 T 31 3 14 26 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT E 32 E 32 3 14 26 3 3 4 4 12 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT R 33 R 33 4 14 26 3 4 5 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT P 34 P 34 4 8 26 2 3 4 5 7 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT F 35 F 35 4 8 26 3 3 4 7 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT W 36 W 36 4 8 26 3 8 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT I 37 I 37 5 8 26 6 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT S 38 S 38 5 8 26 3 5 6 11 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT S 39 S 39 5 8 26 3 5 5 6 7 9 10 13 16 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT F 40 F 40 5 8 26 3 5 5 6 7 9 10 11 15 19 22 23 26 27 27 28 29 30 31 32 LCS_GDT I 41 I 41 5 8 26 3 5 5 6 7 12 15 17 19 20 22 23 26 27 27 28 29 30 31 32 LCS_GDT G 42 G 42 4 8 26 3 4 5 6 7 10 14 16 18 20 22 23 26 27 27 28 29 30 30 31 LCS_GDT R 43 R 43 4 5 26 3 4 4 4 5 6 8 11 11 12 13 18 18 20 22 24 25 25 28 29 LCS_GDT S 44 S 44 4 5 26 3 4 4 4 5 6 9 11 11 12 13 18 18 20 22 24 25 25 26 27 LCS_GDT K 45 K 45 4 5 16 3 4 4 4 5 6 6 6 8 11 11 12 12 13 13 17 17 20 21 24 LCS_AVERAGE LCS_A: 30.48 ( 14.10 22.57 54.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 13 13 16 16 17 18 19 20 22 23 26 27 27 28 29 30 31 32 GDT PERCENT_AT 15.91 25.00 29.55 29.55 36.36 36.36 38.64 40.91 43.18 45.45 50.00 52.27 59.09 61.36 61.36 63.64 65.91 68.18 70.45 72.73 GDT RMS_LOCAL 0.32 0.61 0.85 0.85 1.64 1.64 1.88 2.09 2.29 2.70 3.34 3.57 4.50 4.59 4.59 4.92 5.29 5.54 5.81 5.99 GDT RMS_ALL_AT 22.53 12.86 12.77 12.77 12.60 12.60 13.01 13.11 12.76 12.31 13.02 11.57 12.13 12.11 12.11 12.23 12.30 12.36 11.98 11.78 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 21.789 0 0.674 0.624 24.317 0.000 0.000 - LGA V 3 V 3 25.354 0 0.633 0.517 28.463 0.000 0.000 27.388 LGA Q 4 Q 4 28.209 0 0.638 0.827 32.806 0.000 0.000 31.138 LGA G 5 G 5 26.997 0 0.125 0.125 27.361 0.000 0.000 - LGA P 6 P 6 24.638 0 0.666 0.522 27.572 0.000 0.000 26.918 LGA W 7 W 7 19.045 0 0.379 0.392 26.443 0.000 0.000 25.093 LGA V 8 V 8 13.298 0 0.043 0.980 15.641 0.000 0.000 14.499 LGA G 9 G 9 9.545 0 0.554 0.554 11.514 0.000 0.000 - LGA S 10 S 10 11.970 0 0.643 0.580 15.901 0.000 0.000 15.901 LGA S 11 S 11 16.597 0 0.059 0.656 19.739 0.000 0.000 19.739 LGA Y 12 Y 12 16.404 0 0.081 1.418 18.132 0.000 0.000 17.329 LGA V 13 V 13 11.345 0 0.049 1.081 12.863 0.000 0.000 10.604 LGA A 14 A 14 13.955 0 0.022 0.021 17.286 0.000 0.000 - LGA E 15 E 15 19.620 0 0.013 1.412 26.071 0.000 0.000 24.985 LGA T 16 T 16 17.934 0 0.143 0.266 18.498 0.000 0.000 13.736 LGA G 17 G 17 15.844 0 0.320 0.320 15.966 0.000 0.000 - LGA Q 18 Q 18 12.201 0 0.650 0.958 17.930 0.000 0.000 15.916 LGA N 19 N 19 7.962 0 0.071 1.073 12.549 0.000 0.000 11.290 LGA W 20 W 20 0.983 0 0.622 1.205 9.469 57.727 18.571 9.469 LGA A 21 A 21 1.387 0 0.062 0.060 1.492 65.455 65.455 - LGA S 22 S 22 0.917 0 0.031 0.058 1.091 77.727 76.364 1.051 LGA L 23 L 23 0.745 0 0.047 0.852 2.890 81.818 72.955 2.890 LGA A 24 A 24 0.809 0 0.057 0.059 0.882 81.818 81.818 - LGA A 25 A 25 1.084 0 0.039 0.038 1.425 69.545 68.727 - LGA N 26 N 26 1.634 0 0.029 0.766 3.564 54.545 44.545 1.749 LGA E 27 E 27 1.484 0 0.124 0.951 2.970 61.818 51.717 2.970 LGA L 28 L 28 0.546 0 0.262 1.332 3.276 86.818 72.727 1.610 LGA R 29 R 29 2.115 0 0.580 1.140 11.111 60.455 22.479 10.529 LGA V 30 V 30 4.113 0 0.608 1.284 8.678 13.182 7.532 7.744 LGA T 31 T 31 1.493 0 0.680 1.321 5.000 50.000 34.026 3.199 LGA E 32 E 32 3.487 0 0.068 1.007 9.451 33.182 14.747 8.917 LGA R 33 R 33 2.316 0 0.373 1.246 8.960 23.182 20.000 8.960 LGA P 34 P 34 3.551 0 0.520 0.552 8.071 20.455 11.688 8.071 LGA F 35 F 35 3.406 0 0.704 1.206 5.792 27.727 11.901 5.211 LGA W 36 W 36 1.239 0 0.559 1.307 9.695 49.091 23.896 9.695 LGA I 37 I 37 0.292 0 0.131 1.605 4.686 67.727 55.000 1.229 LGA S 38 S 38 5.233 0 0.100 0.618 8.800 4.545 3.030 8.800 LGA S 39 S 39 9.116 0 0.145 0.251 11.802 0.000 0.000 8.660 LGA F 40 F 40 9.409 0 0.105 1.179 12.401 0.000 0.000 12.401 LGA I 41 I 41 8.141 0 0.087 1.135 10.384 0.000 0.000 7.943 LGA G 42 G 42 10.731 0 0.680 0.680 13.861 0.000 0.000 - LGA R 43 R 43 15.356 0 0.102 1.211 25.588 0.000 0.000 25.588 LGA S 44 S 44 16.701 0 0.180 0.188 19.411 0.000 0.000 13.366 LGA K 45 K 45 22.903 0 0.151 1.070 32.214 0.000 0.000 32.214 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.071 11.078 12.062 22.428 17.209 8.727 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.09 39.773 36.425 0.824 LGA_LOCAL RMSD: 2.085 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.107 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.071 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.851771 * X + 0.039478 * Y + 0.522425 * Z + 8.015657 Y_new = -0.261155 * X + 0.832450 * Y + -0.488697 * Z + 25.912457 Z_new = -0.454185 * X + -0.552692 * Y + -0.698747 * Z + 6.121177 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.844090 0.471458 -2.472378 [DEG: -162.9543 27.0125 -141.6568 ] ZXZ: 0.818742 2.344441 -2.453718 [DEG: 46.9105 134.3266 -140.5877 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS407_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS407_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.09 36.425 11.07 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS407_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 -7.230 28.093 22.642 1.00 5.75 N ATOM 14 CA ALA 2 -6.725 28.247 24.018 1.00 5.75 C ATOM 15 CB ALA 2 -7.009 29.662 24.531 1.00 5.75 C ATOM 16 C ALA 2 -7.349 27.206 24.959 1.00 5.75 C ATOM 17 O ALA 2 -6.773 26.896 26.011 1.00 5.75 O ATOM 18 N VAL 3 -8.512 26.668 24.562 1.00 6.04 N ATOM 20 CA VAL 3 -9.269 25.656 25.329 1.00 6.04 C ATOM 21 CB VAL 3 -10.816 26.003 25.396 1.00 6.04 C ATOM 22 CG1 VAL 3 -11.509 25.236 26.538 1.00 6.04 C ATOM 23 CG2 VAL 3 -11.032 27.505 25.584 1.00 6.04 C ATOM 24 C VAL 3 -9.060 24.261 24.689 1.00 6.04 C ATOM 25 O VAL 3 -9.046 23.248 25.402 1.00 6.04 O ATOM 26 N GLN 4 -8.872 24.237 23.361 1.00 5.77 N ATOM 28 CA GLN 4 -8.660 23.001 22.580 1.00 5.77 C ATOM 29 CB GLN 4 -9.523 23.007 21.308 1.00 5.77 C ATOM 30 CG GLN 4 -11.023 22.885 21.552 1.00 5.77 C ATOM 31 CD GLN 4 -11.825 22.895 20.265 1.00 5.77 C ATOM 32 OE1 GLN 4 -12.248 23.951 19.793 1.00 5.77 O ATOM 33 NE2 GLN 4 -12.040 21.717 19.689 1.00 5.77 N ATOM 36 C GLN 4 -7.188 22.775 22.210 1.00 5.77 C ATOM 37 O GLN 4 -6.701 21.641 22.276 1.00 5.77 O ATOM 38 N GLY 5 -6.498 23.855 21.828 1.00 4.38 N ATOM 40 CA GLY 5 -5.092 23.779 21.451 1.00 4.38 C ATOM 41 C GLY 5 -4.731 24.738 20.321 1.00 4.38 C ATOM 42 O GLY 5 -5.523 24.837 19.375 1.00 4.38 O ATOM 43 N PRO 6 -3.566 25.453 20.364 1.00 3.04 N ATOM 44 CD PRO 6 -2.636 25.556 21.513 1.00 3.04 C ATOM 45 CA PRO 6 -3.158 26.396 19.299 1.00 3.04 C ATOM 46 CB PRO 6 -1.925 27.085 19.901 1.00 3.04 C ATOM 47 CG PRO 6 -1.378 26.073 20.880 1.00 3.04 C ATOM 48 C PRO 6 -2.867 25.796 17.899 1.00 3.04 C ATOM 49 O PRO 6 -2.398 24.655 17.798 1.00 3.04 O ATOM 50 N TRP 7 -3.157 26.578 16.849 1.00 3.13 N ATOM 52 CA TRP 7 -2.952 26.187 15.442 1.00 3.13 C ATOM 53 CB TRP 7 -4.255 26.380 14.629 1.00 3.13 C ATOM 54 CG TRP 7 -5.490 25.578 15.110 1.00 3.13 C ATOM 55 CD2 TRP 7 -5.892 24.250 14.703 1.00 3.13 C ATOM 56 CE2 TRP 7 -7.108 23.956 15.382 1.00 3.13 C ATOM 57 CE3 TRP 7 -5.344 23.279 13.833 1.00 3.13 C ATOM 58 CD1 TRP 7 -6.457 26.009 15.990 1.00 3.13 C ATOM 59 NE1 TRP 7 -7.421 25.044 16.153 1.00 3.13 N ATOM 61 CZ2 TRP 7 -7.796 22.728 15.219 1.00 3.13 C ATOM 62 CZ3 TRP 7 -6.030 22.049 13.668 1.00 3.13 C ATOM 63 CH2 TRP 7 -7.245 21.791 14.364 1.00 3.13 C ATOM 64 C TRP 7 -1.815 26.994 14.796 1.00 3.13 C ATOM 65 O TRP 7 -1.658 28.187 15.088 1.00 3.13 O ATOM 66 N VAL 8 -1.024 26.327 13.941 1.00 2.85 N ATOM 68 CA VAL 8 0.116 26.928 13.219 1.00 2.85 C ATOM 69 CB VAL 8 1.476 26.131 13.505 1.00 2.85 C ATOM 70 CG1 VAL 8 1.431 24.683 12.973 1.00 2.85 C ATOM 71 CG2 VAL 8 2.706 26.898 12.990 1.00 2.85 C ATOM 72 C VAL 8 -0.209 27.047 11.710 1.00 2.85 C ATOM 73 O VAL 8 0.161 28.039 11.069 1.00 2.85 O ATOM 74 N GLY 9 -0.892 26.031 11.175 1.00 2.96 N ATOM 76 CA GLY 9 -1.266 26.010 9.768 1.00 2.96 C ATOM 77 C GLY 9 -1.782 24.657 9.313 1.00 2.96 C ATOM 78 O GLY 9 -1.005 23.838 8.808 1.00 2.96 O ATOM 79 N SER 10 -3.088 24.428 9.504 1.00 2.66 N ATOM 81 CA SER 10 -3.776 23.184 9.119 1.00 2.66 C ATOM 82 CB SER 10 -4.687 22.700 10.262 1.00 2.66 C ATOM 83 OG SER 10 -5.609 23.700 10.665 1.00 2.66 O ATOM 85 C SER 10 -4.574 23.377 7.811 1.00 2.66 C ATOM 86 O SER 10 -4.599 24.488 7.269 1.00 2.66 O ATOM 87 N SER 11 -5.206 22.300 7.317 1.00 2.72 N ATOM 89 CA SER 11 -6.002 22.294 6.073 1.00 2.72 C ATOM 90 OG SER 11 -5.095 20.147 5.394 1.00 2.72 O ATOM 92 C SER 11 -7.313 23.103 6.090 1.00 2.72 C ATOM 93 O SER 11 -7.637 23.764 5.097 1.00 2.72 O ATOM 94 CB SER 11 -6.295 20.856 5.644 1.00 2.72 C ATOM 95 N TYR 12 -8.032 23.068 7.222 1.00 2.89 N ATOM 97 CA TYR 12 -9.314 23.782 7.412 1.00 2.89 C ATOM 98 CB TYR 12 -9.993 23.331 8.727 1.00 2.89 C ATOM 99 CG TYR 12 -10.393 21.853 8.826 1.00 2.89 C ATOM 100 CD1 TYR 12 -9.504 20.888 9.361 1.00 2.89 C ATOM 101 CE1 TYR 12 -9.883 19.522 9.486 1.00 2.89 C ATOM 102 CD2 TYR 12 -11.677 21.413 8.418 1.00 2.89 C ATOM 103 CE2 TYR 12 -12.064 20.050 8.540 1.00 2.89 C ATOM 104 CZ TYR 12 -11.162 19.116 9.074 1.00 2.89 C ATOM 105 OH TYR 12 -11.530 17.795 9.195 1.00 2.89 O ATOM 107 C TYR 12 -9.135 25.309 7.420 1.00 2.89 C ATOM 108 O TYR 12 -9.879 26.028 6.737 1.00 2.89 O ATOM 109 N VAL 13 -8.120 25.776 8.163 1.00 2.88 N ATOM 111 CA VAL 13 -7.771 27.205 8.290 1.00 2.88 C ATOM 112 CB VAL 13 -6.796 27.479 9.500 1.00 2.88 C ATOM 113 CG1 VAL 13 -7.529 27.274 10.821 1.00 2.88 C ATOM 114 CG2 VAL 13 -5.543 26.586 9.452 1.00 2.88 C ATOM 115 C VAL 13 -7.215 27.780 6.967 1.00 2.88 C ATOM 116 O VAL 13 -7.542 28.912 6.594 1.00 2.88 O ATOM 117 N ALA 14 -6.431 26.951 6.256 1.00 2.85 N ATOM 119 CA ALA 14 -5.802 27.277 4.960 1.00 2.85 C ATOM 120 CB ALA 14 -4.768 26.216 4.594 1.00 2.85 C ATOM 121 C ALA 14 -6.833 27.428 3.827 1.00 2.85 C ATOM 122 O ALA 14 -6.727 28.352 3.013 1.00 2.85 O ATOM 123 N GLU 15 -7.815 26.513 3.794 1.00 2.86 N ATOM 125 CA GLU 15 -8.911 26.496 2.802 1.00 2.86 C ATOM 126 CB GLU 15 -9.672 25.165 2.847 1.00 2.86 C ATOM 127 CG GLU 15 -8.943 23.998 2.190 1.00 2.86 C ATOM 128 CD GLU 15 -9.729 22.702 2.257 1.00 2.86 C ATOM 129 OE1 GLU 15 -9.560 21.951 3.242 1.00 2.86 O ATOM 130 OE2 GLU 15 -10.515 22.432 1.324 1.00 2.86 O ATOM 131 C GLU 15 -9.893 27.668 2.976 1.00 2.86 C ATOM 132 O GLU 15 -10.383 28.216 1.982 1.00 2.86 O ATOM 133 N THR 16 -10.167 28.034 4.238 1.00 2.64 N ATOM 135 CA THR 16 -11.074 29.143 4.610 1.00 2.64 C ATOM 136 CB THR 16 -11.466 29.090 6.116 1.00 2.64 C ATOM 137 OG1 THR 16 -10.286 28.955 6.919 1.00 2.64 O ATOM 139 CG2 THR 16 -12.410 27.924 6.390 1.00 2.64 C ATOM 140 C THR 16 -10.538 30.548 4.258 1.00 2.64 C ATOM 141 O THR 16 -11.287 31.383 3.737 1.00 2.64 O ATOM 142 N GLY 17 -9.247 30.783 4.529 1.00 2.69 N ATOM 144 CA GLY 17 -8.606 32.063 4.239 1.00 2.69 C ATOM 145 C GLY 17 -8.429 32.986 5.438 1.00 2.69 C ATOM 146 O GLY 17 -7.298 33.350 5.782 1.00 2.69 O ATOM 147 N GLN 18 -9.556 33.387 6.037 1.00 2.98 N ATOM 149 CA GLN 18 -9.626 34.279 7.210 1.00 2.98 C ATOM 150 CB GLN 18 -11.061 34.789 7.412 1.00 2.98 C ATOM 151 CG GLN 18 -11.550 35.760 6.342 1.00 2.98 C ATOM 152 CD GLN 18 -12.971 36.231 6.588 1.00 2.98 C ATOM 153 OE1 GLN 18 -13.193 37.248 7.246 1.00 2.98 O ATOM 154 NE2 GLN 18 -13.941 35.493 6.060 1.00 2.98 N ATOM 157 C GLN 18 -9.105 33.676 8.527 1.00 2.98 C ATOM 158 O GLN 18 -8.480 34.383 9.326 1.00 2.98 O ATOM 159 N ASN 19 -9.356 32.372 8.724 1.00 2.52 N ATOM 161 CA ASN 19 -8.961 31.613 9.931 1.00 2.52 C ATOM 162 CB ASN 19 -9.606 30.219 9.920 1.00 2.52 C ATOM 163 CG ASN 19 -11.108 30.260 10.184 1.00 2.52 C ATOM 164 OD1 ASN 19 -11.553 30.070 11.316 1.00 2.52 O ATOM 165 ND2 ASN 19 -11.892 30.499 9.136 1.00 2.52 N ATOM 168 C ASN 19 -7.453 31.500 10.228 1.00 2.52 C ATOM 169 O ASN 19 -7.047 31.715 11.378 1.00 2.52 O ATOM 170 N TRP 20 -6.636 31.188 9.208 1.00 2.36 N ATOM 172 CA TRP 20 -5.168 31.061 9.356 1.00 2.36 C ATOM 173 CB TRP 20 -4.527 30.357 8.121 1.00 2.36 C ATOM 174 CG TRP 20 -4.563 31.103 6.747 1.00 2.36 C ATOM 175 CD2 TRP 20 -3.629 32.097 6.257 1.00 2.36 C ATOM 176 CE2 TRP 20 -4.048 32.451 4.943 1.00 2.36 C ATOM 177 CE3 TRP 20 -2.482 32.721 6.797 1.00 2.36 C ATOM 178 CD1 TRP 20 -5.470 30.915 5.736 1.00 2.36 C ATOM 179 NE1 TRP 20 -5.169 31.716 4.660 1.00 2.36 N ATOM 181 CZ2 TRP 20 -3.363 33.406 4.154 1.00 2.36 C ATOM 182 CZ3 TRP 20 -1.791 33.678 6.009 1.00 2.36 C ATOM 183 CH2 TRP 20 -2.242 34.006 4.700 1.00 2.36 C ATOM 184 C TRP 20 -4.507 32.425 9.646 1.00 2.36 C ATOM 185 O TRP 20 -3.592 32.516 10.476 1.00 2.36 O ATOM 186 N ALA 21 -5.017 33.467 8.970 1.00 2.40 N ATOM 188 CA ALA 21 -4.552 34.864 9.096 1.00 2.40 C ATOM 189 CB ALA 21 -5.151 35.721 7.985 1.00 2.40 C ATOM 190 C ALA 21 -4.879 35.468 10.471 1.00 2.40 C ATOM 191 O ALA 21 -4.020 36.111 11.087 1.00 2.40 O ATOM 192 N SER 22 -6.116 35.234 10.941 1.00 2.92 N ATOM 194 CA SER 22 -6.622 35.713 12.244 1.00 2.92 C ATOM 195 CB SER 22 -8.146 35.543 12.321 1.00 2.92 C ATOM 196 OG SER 22 -8.536 34.206 12.054 1.00 2.92 O ATOM 198 C SER 22 -5.945 35.028 13.447 1.00 2.92 C ATOM 199 O SER 22 -5.601 35.699 14.424 1.00 2.92 O ATOM 200 N LEU 23 -5.736 33.706 13.340 1.00 3.08 N ATOM 202 CA LEU 23 -5.097 32.876 14.383 1.00 3.08 C ATOM 203 CB LEU 23 -5.277 31.367 14.054 1.00 3.08 C ATOM 204 CG LEU 23 -5.535 30.142 14.985 1.00 3.08 C ATOM 205 CD1 LEU 23 -4.375 29.865 15.953 1.00 3.08 C ATOM 206 CD2 LEU 23 -6.874 30.232 15.740 1.00 3.08 C ATOM 207 C LEU 23 -3.603 33.226 14.544 1.00 3.08 C ATOM 208 O LEU 23 -3.113 33.346 15.673 1.00 3.08 O ATOM 209 N ALA 24 -2.913 33.417 13.409 1.00 3.09 N ATOM 211 CA ALA 24 -1.482 33.775 13.358 1.00 3.09 C ATOM 212 CB ALA 24 -0.956 33.640 11.931 1.00 3.09 C ATOM 213 C ALA 24 -1.238 35.199 13.889 1.00 3.09 C ATOM 214 O ALA 24 -0.378 35.393 14.753 1.00 3.09 O ATOM 215 N ALA 25 -2.074 36.151 13.442 1.00 3.12 N ATOM 217 CA ALA 25 -2.010 37.575 13.834 1.00 3.12 C ATOM 218 CB ALA 25 -3.019 38.386 13.036 1.00 3.12 C ATOM 219 C ALA 25 -2.253 37.755 15.341 1.00 3.12 C ATOM 220 O ALA 25 -1.587 38.575 15.984 1.00 3.12 O ATOM 221 N ASN 26 -3.209 36.983 15.877 1.00 3.60 N ATOM 223 CA ASN 26 -3.573 36.975 17.305 1.00 3.60 C ATOM 224 CB ASN 26 -4.919 36.271 17.522 1.00 3.60 C ATOM 225 CG ASN 26 -6.106 37.227 17.439 1.00 3.60 C ATOM 226 OD1 ASN 26 -6.610 37.691 18.462 1.00 3.60 O ATOM 227 ND2 ASN 26 -6.560 37.516 16.222 1.00 3.60 N ATOM 230 C ASN 26 -2.499 36.361 18.221 1.00 3.60 C ATOM 231 O ASN 26 -2.267 36.878 19.321 1.00 3.60 O ATOM 232 N GLU 27 -1.861 35.266 17.769 1.00 3.70 N ATOM 234 CA GLU 27 -0.809 34.570 18.542 1.00 3.70 C ATOM 235 CG GLU 27 -1.602 32.134 18.230 1.00 3.70 C ATOM 236 CD GLU 27 -1.198 30.743 17.769 1.00 3.70 C ATOM 237 OE1 GLU 27 -1.331 30.446 16.562 1.00 3.70 O ATOM 238 OE2 GLU 27 -0.746 29.946 18.617 1.00 3.70 O ATOM 239 C GLU 27 0.516 35.341 18.701 1.00 3.70 C ATOM 240 O GLU 27 0.999 35.472 19.831 1.00 3.70 O ATOM 241 CB GLU 27 -0.525 33.179 17.956 1.00 3.70 C ATOM 242 N LEU 28 1.095 35.840 17.596 1.00 3.70 N ATOM 244 CA LEU 28 2.342 36.634 17.643 1.00 3.70 C ATOM 245 CB LEU 28 3.133 36.618 16.306 1.00 3.70 C ATOM 246 CG LEU 28 2.798 36.747 14.794 1.00 3.70 C ATOM 247 CD1 LEU 28 2.520 35.380 14.176 1.00 3.70 C ATOM 248 CD2 LEU 28 1.715 37.778 14.457 1.00 3.70 C ATOM 249 C LEU 28 2.198 38.067 18.184 1.00 3.70 C ATOM 250 O LEU 28 3.002 38.499 19.018 1.00 3.70 O ATOM 251 N ARG 29 1.166 38.773 17.703 1.00 4.15 N ATOM 253 CA ARG 29 0.854 40.164 18.084 1.00 4.15 C ATOM 254 CB ARG 29 0.433 40.977 16.850 1.00 4.15 C ATOM 255 CG ARG 29 1.553 41.241 15.841 1.00 4.15 C ATOM 256 CD ARG 29 1.062 42.035 14.632 1.00 4.15 C ATOM 257 NE ARG 29 0.125 41.276 13.798 1.00 4.15 N ATOM 259 CZ ARG 29 -0.581 41.777 12.785 1.00 4.15 C ATOM 260 NH1 ARG 29 -1.399 40.985 12.105 1.00 4.15 N ATOM 263 NH2 ARG 29 -0.483 43.058 12.443 1.00 4.15 N ATOM 266 C ARG 29 -0.245 40.233 19.158 1.00 4.15 C ATOM 267 O ARG 29 -0.980 39.259 19.355 1.00 4.15 O ATOM 268 N VAL 30 -0.339 41.387 19.836 1.00 4.83 N ATOM 270 CA VAL 30 -1.318 41.652 20.907 1.00 4.83 C ATOM 271 CB VAL 30 -0.615 42.439 22.112 1.00 4.83 C ATOM 272 CG1 VAL 30 -0.192 43.868 21.710 1.00 4.83 C ATOM 273 CG2 VAL 30 -1.479 42.428 23.384 1.00 4.83 C ATOM 274 C VAL 30 -2.603 42.343 20.350 1.00 4.83 C ATOM 275 O VAL 30 -3.607 42.477 21.067 1.00 4.83 O ATOM 276 N THR 31 -2.561 42.709 19.060 1.00 5.26 N ATOM 278 CA THR 31 -3.671 43.377 18.343 1.00 5.26 C ATOM 279 CB THR 31 -3.132 44.349 17.212 1.00 5.26 C ATOM 280 OG1 THR 31 -4.229 44.909 16.476 1.00 5.26 O ATOM 282 CG2 THR 31 -2.155 43.643 16.243 1.00 5.26 C ATOM 283 C THR 31 -4.736 42.387 17.800 1.00 5.26 C ATOM 284 O THR 31 -4.394 41.264 17.407 1.00 5.26 O ATOM 285 N GLU 32 -6.005 42.820 17.795 1.00 6.30 N ATOM 287 CA GLU 32 -7.153 42.018 17.328 1.00 6.30 C ATOM 288 CB GLU 32 -8.334 42.102 18.326 1.00 6.30 C ATOM 289 CG GLU 32 -8.735 43.509 18.822 1.00 6.30 C ATOM 290 CD GLU 32 -9.900 43.475 19.794 1.00 6.30 C ATOM 291 OE1 GLU 32 -9.657 43.367 21.013 1.00 6.30 O ATOM 292 OE2 GLU 32 -11.060 43.557 19.336 1.00 6.30 O ATOM 293 C GLU 32 -7.624 42.303 15.886 1.00 6.30 C ATOM 294 O GLU 32 -7.705 43.467 15.474 1.00 6.30 O ATOM 295 N ARG 33 -7.926 41.220 15.147 1.00 5.77 N ATOM 297 CA ARG 33 -8.409 41.199 13.736 1.00 5.77 C ATOM 298 CB ARG 33 -9.950 41.323 13.674 1.00 5.77 C ATOM 299 CG ARG 33 -10.712 40.117 14.228 1.00 5.77 C ATOM 300 CD ARG 33 -12.226 40.298 14.139 1.00 5.77 C ATOM 301 NE ARG 33 -12.733 41.322 15.060 1.00 5.77 N ATOM 303 CZ ARG 33 -14.012 41.678 15.186 1.00 5.77 C ATOM 304 NH1 ARG 33 -14.346 42.619 16.057 1.00 5.77 N ATOM 307 NH2 ARG 33 -14.961 41.103 14.452 1.00 5.77 N ATOM 310 C ARG 33 -7.721 42.142 12.692 1.00 5.77 C ATOM 311 O ARG 33 -8.388 43.023 12.127 1.00 5.77 O ATOM 312 N PRO 34 -6.378 41.985 12.442 1.00 4.93 N ATOM 313 CD PRO 34 -5.374 41.230 13.226 1.00 4.93 C ATOM 314 CA PRO 34 -5.674 42.844 11.462 1.00 4.93 C ATOM 315 CB PRO 34 -4.191 42.620 11.804 1.00 4.93 C ATOM 316 CG PRO 34 -4.210 42.178 13.231 1.00 4.93 C ATOM 317 C PRO 34 -5.961 42.525 9.972 1.00 4.93 C ATOM 318 O PRO 34 -6.442 43.396 9.238 1.00 4.93 O ATOM 319 N PHE 35 -5.693 41.271 9.558 1.00 4.22 N ATOM 321 CA PHE 35 -5.876 40.724 8.183 1.00 4.22 C ATOM 322 CB PHE 35 -7.382 40.695 7.768 1.00 4.22 C ATOM 323 CG PHE 35 -8.264 39.784 8.619 1.00 4.22 C ATOM 324 CD1 PHE 35 -8.444 38.422 8.274 1.00 4.22 C ATOM 325 CD2 PHE 35 -8.952 40.290 9.747 1.00 4.22 C ATOM 326 CE1 PHE 35 -9.295 37.577 9.039 1.00 4.22 C ATOM 327 CE2 PHE 35 -9.806 39.457 10.521 1.00 4.22 C ATOM 328 CZ PHE 35 -9.978 38.097 10.166 1.00 4.22 C ATOM 329 C PHE 35 -5.012 41.359 7.065 1.00 4.22 C ATOM 330 O PHE 35 -5.061 40.915 5.908 1.00 4.22 O ATOM 331 N TRP 36 -4.190 42.352 7.437 1.00 4.78 N ATOM 333 CA TRP 36 -3.298 43.077 6.511 1.00 4.78 C ATOM 334 CB TRP 36 -3.372 44.610 6.773 1.00 4.78 C ATOM 335 CG TRP 36 -3.234 45.103 8.246 1.00 4.78 C ATOM 336 CD2 TRP 36 -2.020 45.266 9.018 1.00 4.78 C ATOM 337 CE2 TRP 36 -2.399 45.790 10.286 1.00 4.78 C ATOM 338 CE3 TRP 36 -0.649 45.021 8.764 1.00 4.78 C ATOM 339 CD1 TRP 36 -4.254 45.525 9.063 1.00 4.78 C ATOM 340 NE1 TRP 36 -3.761 45.933 10.278 1.00 4.78 N ATOM 342 CZ2 TRP 36 -1.458 46.076 11.306 1.00 4.78 C ATOM 343 CZ3 TRP 36 0.294 45.308 9.783 1.00 4.78 C ATOM 344 CH2 TRP 36 -0.124 45.831 11.038 1.00 4.78 C ATOM 345 C TRP 36 -1.833 42.569 6.510 1.00 4.78 C ATOM 346 O TRP 36 -0.919 43.281 6.065 1.00 4.78 O ATOM 347 N ILE 37 -1.636 41.320 6.959 1.00 4.96 N ATOM 349 CA ILE 37 -0.304 40.672 7.046 1.00 4.96 C ATOM 350 CB ILE 37 -0.328 39.393 7.983 1.00 4.96 C ATOM 351 CG2 ILE 37 -0.126 39.836 9.440 1.00 4.96 C ATOM 352 CG1 ILE 37 -1.622 38.561 7.784 1.00 4.96 C ATOM 353 CD1 ILE 37 -1.541 37.075 8.167 1.00 4.96 C ATOM 354 C ILE 37 0.418 40.340 5.712 1.00 4.96 C ATOM 355 O ILE 37 1.595 40.681 5.552 1.00 4.96 O ATOM 356 N SER 38 -0.298 39.698 4.776 1.00 6.66 N ATOM 358 CA SER 38 0.214 39.305 3.446 1.00 6.66 C ATOM 359 CB SER 38 -0.683 38.208 2.842 1.00 6.66 C ATOM 360 OG SER 38 -0.148 37.682 1.638 1.00 6.66 O ATOM 362 C SER 38 0.437 40.456 2.433 1.00 6.66 C ATOM 363 O SER 38 1.425 40.445 1.690 1.00 6.66 O ATOM 364 N SER 39 -0.482 41.431 2.440 1.00 7.69 N ATOM 366 CA SER 39 -0.504 42.607 1.538 1.00 7.69 C ATOM 367 CB SER 39 -1.899 43.245 1.564 1.00 7.69 C ATOM 368 OG SER 39 -2.272 43.619 2.880 1.00 7.69 O ATOM 370 C SER 39 0.563 43.723 1.626 1.00 7.69 C ATOM 371 O SER 39 0.977 44.248 0.583 1.00 7.69 O ATOM 372 N PHE 40 1.012 44.063 2.843 1.00 8.29 N ATOM 374 CA PHE 40 1.992 45.147 3.096 1.00 8.29 C ATOM 375 CB PHE 40 2.120 45.411 4.616 1.00 8.29 C ATOM 376 CG PHE 40 1.212 46.520 5.148 1.00 8.29 C ATOM 377 CD1 PHE 40 -0.136 46.257 5.496 1.00 8.29 C ATOM 378 CD2 PHE 40 1.712 47.830 5.334 1.00 8.29 C ATOM 379 CE1 PHE 40 -0.971 47.282 6.022 1.00 8.29 C ATOM 380 CE2 PHE 40 0.889 48.865 5.858 1.00 8.29 C ATOM 381 CZ PHE 40 -0.456 48.589 6.203 1.00 8.29 C ATOM 382 C PHE 40 3.394 45.110 2.455 1.00 8.29 C ATOM 383 O PHE 40 3.826 46.129 1.905 1.00 8.29 O ATOM 384 N ILE 41 4.068 43.946 2.503 1.00 5.94 N ATOM 386 CA ILE 41 5.437 43.671 1.957 1.00 5.94 C ATOM 387 CB ILE 41 5.407 42.827 0.601 1.00 5.94 C ATOM 388 CG2 ILE 41 4.945 41.396 0.901 1.00 5.94 C ATOM 389 CG1 ILE 41 4.522 43.487 -0.483 1.00 5.94 C ATOM 390 CD1 ILE 41 5.059 43.375 -1.916 1.00 5.94 C ATOM 391 C ILE 41 6.511 44.795 1.869 1.00 5.94 C ATOM 392 O ILE 41 6.235 45.888 1.356 1.00 5.94 O ATOM 393 N GLY 42 7.718 44.498 2.360 1.00 6.17 N ATOM 395 CA GLY 42 8.822 45.454 2.344 1.00 6.17 C ATOM 396 C GLY 42 10.094 44.881 1.738 1.00 6.17 C ATOM 397 O GLY 42 10.026 43.887 1.006 1.00 6.17 O ATOM 398 N ARG 43 11.240 45.510 2.037 1.00 5.61 N ATOM 400 CA ARG 43 12.570 45.095 1.542 1.00 5.61 C ATOM 401 CB ARG 43 13.049 45.989 0.364 1.00 5.61 C ATOM 402 CG ARG 43 12.873 47.519 0.528 1.00 5.61 C ATOM 403 CD ARG 43 13.341 48.292 -0.703 1.00 5.61 C ATOM 404 NE ARG 43 14.797 48.265 -0.875 1.00 5.61 N ATOM 406 CZ ARG 43 15.469 48.893 -1.840 1.00 5.61 C ATOM 407 NH1 ARG 43 16.790 48.793 -1.890 1.00 5.61 N ATOM 410 NH2 ARG 43 14.837 49.621 -2.757 1.00 5.61 N ATOM 413 C ARG 43 13.646 45.019 2.650 1.00 5.61 C ATOM 414 O ARG 43 13.798 45.967 3.432 1.00 5.61 O ATOM 415 N SER 44 14.357 43.880 2.715 1.00 5.57 N ATOM 417 CA SER 44 15.433 43.619 3.698 1.00 5.57 C ATOM 418 CB SER 44 14.896 42.844 4.918 1.00 5.57 C ATOM 419 OG SER 44 13.876 43.573 5.577 1.00 5.57 O ATOM 421 C SER 44 16.604 42.839 3.066 1.00 5.57 C ATOM 422 O SER 44 16.459 41.651 2.750 1.00 5.57 O ATOM 423 N LYS 45 17.741 43.522 2.859 1.00 5.36 N ATOM 425 CA LYS 45 18.968 42.931 2.276 1.00 5.36 C ATOM 426 CG LYS 45 18.860 44.681 0.299 1.00 5.36 C ATOM 427 CD LYS 45 19.024 44.820 -1.211 1.00 5.36 C ATOM 428 CE LYS 45 18.814 46.255 -1.685 1.00 5.36 C ATOM 429 NZ LYS 45 19.890 47.193 -1.243 1.00 5.36 N ATOM 433 C LYS 45 20.253 43.323 3.043 1.00 5.36 C ATOM 434 O LYS 45 20.585 44.514 3.137 1.00 5.36 O ATOM 435 CB LYS 45 19.090 43.224 0.754 1.00 5.36 C TER END