####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS402_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS402_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 19 - 35 5.00 14.72 LCS_AVERAGE: 34.09 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 21 - 29 1.58 16.17 LCS_AVERAGE: 14.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 22 - 29 0.63 15.96 LCS_AVERAGE: 10.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 10 3 5 5 5 5 6 6 6 6 7 7 9 11 11 12 19 23 26 29 30 LCS_GDT V 3 V 3 5 6 10 3 5 5 5 5 6 6 6 6 7 8 9 17 18 22 25 27 28 29 30 LCS_GDT Q 4 Q 4 5 6 11 3 5 5 5 5 6 8 11 14 15 17 20 22 25 27 27 29 29 29 32 LCS_GDT G 5 G 5 5 6 11 4 5 5 5 7 8 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT P 6 P 6 5 6 11 2 5 5 5 5 6 7 11 13 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT W 7 W 7 3 6 11 3 3 4 4 5 8 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT V 8 V 8 3 5 13 3 3 5 9 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT G 9 G 9 3 5 13 3 3 5 6 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT S 10 S 10 3 5 13 0 3 4 5 5 5 8 11 13 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT S 11 S 11 3 3 13 1 3 4 5 5 5 8 9 12 14 16 19 22 25 27 27 29 29 30 32 LCS_GDT Y 12 Y 12 3 3 15 1 3 4 5 5 6 8 9 10 12 15 18 20 25 27 27 29 29 30 32 LCS_GDT V 13 V 13 3 3 15 3 3 3 3 4 6 8 9 10 12 15 18 22 25 27 27 29 29 30 32 LCS_GDT A 14 A 14 3 5 15 3 3 3 4 4 6 7 9 10 12 13 16 18 22 24 26 29 29 30 32 LCS_GDT E 15 E 15 3 5 15 3 3 3 4 4 5 7 9 10 12 13 16 17 19 22 24 26 29 30 32 LCS_GDT T 16 T 16 3 7 15 3 3 5 6 7 7 7 9 10 12 13 16 17 19 21 24 26 28 30 32 LCS_GDT G 17 G 17 5 7 15 3 5 5 6 7 7 7 9 10 12 13 16 17 19 22 23 26 29 30 32 LCS_GDT Q 18 Q 18 5 7 15 3 5 5 6 7 7 7 9 10 12 13 16 17 21 23 25 29 29 30 32 LCS_GDT N 19 N 19 5 7 17 3 5 5 6 7 7 7 9 10 12 13 16 20 22 27 27 29 29 30 32 LCS_GDT W 20 W 20 5 7 17 3 5 5 6 7 7 7 9 11 13 16 20 22 25 27 27 29 29 30 32 LCS_GDT A 21 A 21 5 9 17 3 5 5 6 7 9 9 9 11 13 16 20 22 25 27 27 29 29 30 32 LCS_GDT S 22 S 22 8 9 17 4 8 8 9 10 10 10 10 11 13 16 20 22 25 27 27 29 29 30 32 LCS_GDT L 23 L 23 8 9 17 4 8 8 9 10 10 10 10 14 14 16 20 22 25 27 27 29 29 30 32 LCS_GDT A 24 A 24 8 9 17 6 8 8 9 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT A 25 A 25 8 9 17 6 8 8 9 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT N 26 N 26 8 9 17 6 8 8 9 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT E 27 E 27 8 9 17 6 8 8 9 10 10 10 10 14 14 17 20 22 25 27 27 29 29 30 32 LCS_GDT L 28 L 28 8 9 17 6 8 8 9 10 10 10 10 11 13 16 20 22 25 27 27 29 29 30 32 LCS_GDT R 29 R 29 8 9 17 6 8 8 9 10 10 10 11 14 14 17 20 22 25 27 27 29 29 30 32 LCS_GDT V 30 V 30 3 4 17 4 4 5 6 7 8 10 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT T 31 T 31 3 4 17 3 3 6 6 6 6 8 9 14 14 16 20 22 25 27 27 29 29 30 32 LCS_GDT E 32 E 32 4 5 17 3 4 6 6 7 8 9 11 14 15 17 20 22 25 27 27 29 29 30 32 LCS_GDT R 33 R 33 4 5 17 3 4 4 4 4 7 10 11 13 15 17 18 21 25 27 27 29 29 30 32 LCS_GDT P 34 P 34 4 5 17 3 4 4 4 4 6 10 11 13 15 17 18 21 25 27 27 29 29 30 32 LCS_GDT F 35 F 35 4 5 17 3 4 6 6 6 6 7 9 12 15 17 18 21 25 27 27 29 29 30 32 LCS_GDT W 36 W 36 4 5 15 1 3 6 6 6 6 7 8 10 11 12 13 14 15 15 22 24 27 29 31 LCS_GDT I 37 I 37 4 6 15 3 3 6 6 6 7 7 9 10 11 12 13 14 15 15 16 17 18 19 22 LCS_GDT S 38 S 38 4 6 15 3 3 6 6 6 6 7 9 10 11 12 13 14 15 15 16 17 18 19 21 LCS_GDT S 39 S 39 4 6 15 3 3 5 5 6 6 7 8 8 11 12 13 14 15 15 16 17 18 19 21 LCS_GDT F 40 F 40 4 6 15 3 3 5 5 6 7 7 9 10 11 12 13 14 15 15 16 16 18 19 21 LCS_GDT I 41 I 41 4 6 15 3 3 5 5 6 7 7 9 10 11 12 13 14 15 15 16 17 18 19 21 LCS_GDT G 42 G 42 4 6 15 3 4 5 5 6 7 7 8 10 11 11 13 14 15 15 16 17 18 19 21 LCS_GDT R 43 R 43 4 6 15 3 4 4 4 6 7 7 9 10 11 12 13 14 15 15 16 16 18 19 21 LCS_GDT S 44 S 44 4 5 15 3 4 4 5 5 7 7 9 10 11 12 13 14 14 15 16 16 17 17 17 LCS_GDT K 45 K 45 4 5 15 3 4 4 4 5 7 7 8 10 11 12 13 14 14 15 15 15 16 16 16 LCS_AVERAGE LCS_A: 19.58 ( 10.64 14.00 34.09 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 9 10 10 10 11 14 15 17 20 22 25 27 27 29 29 30 32 GDT PERCENT_AT 13.64 18.18 18.18 20.45 22.73 22.73 22.73 25.00 31.82 34.09 38.64 45.45 50.00 56.82 61.36 61.36 65.91 65.91 68.18 72.73 GDT RMS_LOCAL 0.23 0.63 0.63 1.14 1.30 1.30 1.30 2.74 3.29 3.58 3.90 4.36 4.68 5.11 5.35 5.35 5.81 5.81 6.30 6.59 GDT RMS_ALL_AT 16.40 15.96 15.96 15.58 15.49 15.49 15.49 13.21 13.54 13.23 13.15 13.22 13.07 13.07 13.15 13.15 13.14 13.14 13.29 13.25 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.159 0 0.045 0.048 10.377 0.000 0.000 - LGA V 3 V 3 7.782 0 0.071 1.082 9.095 0.000 0.000 9.095 LGA Q 4 Q 4 3.812 0 0.058 0.962 6.994 8.636 8.283 4.141 LGA G 5 G 5 2.728 0 0.021 0.021 3.166 25.455 25.455 - LGA P 6 P 6 5.758 0 0.713 0.558 9.410 4.091 2.338 9.410 LGA W 7 W 7 3.184 0 0.493 1.161 5.324 15.455 15.195 3.149 LGA V 8 V 8 3.573 0 0.663 1.482 6.515 19.091 11.429 4.873 LGA G 9 G 9 2.121 0 0.535 0.535 3.215 25.455 25.455 - LGA S 10 S 10 6.278 0 0.675 0.673 10.186 0.000 0.000 10.186 LGA S 11 S 11 7.819 0 0.618 0.580 10.040 0.000 0.000 10.040 LGA Y 12 Y 12 9.127 0 0.643 0.997 13.310 0.000 0.000 13.310 LGA V 13 V 13 8.801 0 0.613 0.616 10.562 0.000 0.000 10.562 LGA A 14 A 14 13.712 0 0.624 0.603 15.838 0.000 0.000 - LGA E 15 E 15 16.569 0 0.649 1.157 20.334 0.000 0.000 20.334 LGA T 16 T 16 16.579 0 0.731 1.371 18.406 0.000 0.000 18.406 LGA G 17 G 17 16.991 0 0.650 0.650 17.397 0.000 0.000 - LGA Q 18 Q 18 12.897 0 0.051 1.192 14.702 0.000 0.000 10.976 LGA N 19 N 19 10.296 0 0.056 0.788 11.437 0.000 0.000 10.400 LGA W 20 W 20 6.719 0 0.022 0.226 7.808 0.000 3.896 5.086 LGA A 21 A 21 8.079 0 0.675 0.639 10.679 0.000 0.000 - LGA S 22 S 22 6.240 0 0.611 0.815 6.659 0.455 0.303 6.659 LGA L 23 L 23 5.328 0 0.071 1.033 10.354 7.273 3.636 10.354 LGA A 24 A 24 1.783 0 0.055 0.068 2.811 52.727 55.273 - LGA A 25 A 25 2.242 0 0.057 0.067 3.982 51.364 43.273 - LGA N 26 N 26 2.133 0 0.032 1.218 9.121 33.636 17.500 7.595 LGA E 27 E 27 5.301 0 0.080 1.402 12.707 2.727 1.212 12.707 LGA L 28 L 28 5.979 0 0.215 0.196 8.341 0.455 0.227 7.184 LGA R 29 R 29 3.975 0 0.397 1.551 10.024 15.455 6.281 10.024 LGA V 30 V 30 1.818 0 0.608 0.526 5.091 33.636 24.416 5.050 LGA T 31 T 31 5.398 0 0.109 1.074 9.312 5.909 3.377 8.283 LGA E 32 E 32 1.132 0 0.645 1.411 7.403 37.273 18.586 7.403 LGA R 33 R 33 7.554 0 0.622 1.488 14.956 0.000 0.000 14.956 LGA P 34 P 34 8.839 0 0.662 0.637 11.279 0.000 0.000 11.279 LGA F 35 F 35 6.819 0 0.584 1.423 11.000 0.000 0.000 6.953 LGA W 36 W 36 12.926 0 0.205 1.168 18.556 0.000 0.000 18.556 LGA I 37 I 37 15.335 0 0.680 1.394 18.045 0.000 0.000 17.618 LGA S 38 S 38 17.144 0 0.681 0.845 17.752 0.000 0.000 16.576 LGA S 39 S 39 18.203 0 0.093 0.612 20.134 0.000 0.000 19.201 LGA F 40 F 40 20.422 0 0.656 0.944 20.989 0.000 0.000 20.452 LGA I 41 I 41 23.405 0 0.247 1.005 26.956 0.000 0.000 26.072 LGA G 42 G 42 26.657 0 0.654 0.654 27.547 0.000 0.000 - LGA R 43 R 43 27.927 0 0.158 1.431 28.946 0.000 0.000 27.049 LGA S 44 S 44 29.630 0 0.105 0.645 31.102 0.000 0.000 31.102 LGA K 45 K 45 31.987 0 0.177 1.085 37.496 0.000 0.000 37.496 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.657 11.572 12.304 7.707 6.048 0.727 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.74 31.250 26.576 0.387 LGA_LOCAL RMSD: 2.739 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.208 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.657 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.978815 * X + -0.184962 * Y + -0.087807 * Z + -37.074665 Y_new = 0.203462 * X + 0.926655 * Y + 0.316090 * Z + 94.104836 Z_new = 0.022902 * X + -0.327259 * Y + 0.944657 * Z + 42.416264 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.204947 -0.022904 -0.333493 [DEG: 11.7426 -1.3123 -19.1077 ] ZXZ: -2.870635 0.334249 3.071727 [DEG: -164.4753 19.1510 175.9970 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS402_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS402_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.74 26.576 11.66 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS402_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 20.444 38.234 9.357 1.00173.41 N ATOM 10 CA ALA 2 19.335 39.126 9.213 1.00173.41 C ATOM 11 CB ALA 2 19.340 39.921 7.896 1.00173.41 C ATOM 12 C ALA 2 18.095 38.299 9.240 1.00173.41 C ATOM 13 O ALA 2 18.131 37.095 8.987 1.00173.41 O ATOM 14 N VAL 3 16.960 38.930 9.585 1.00124.75 N ATOM 15 CA VAL 3 15.725 38.212 9.614 1.00124.75 C ATOM 16 CB VAL 3 14.782 38.678 10.682 1.00124.75 C ATOM 17 CG1 VAL 3 14.419 40.146 10.400 1.00124.75 C ATOM 18 CG2 VAL 3 13.565 37.738 10.703 1.00124.75 C ATOM 19 C VAL 3 15.060 38.452 8.303 1.00124.75 C ATOM 20 O VAL 3 15.098 39.561 7.770 1.00124.75 O ATOM 21 N GLN 4 14.449 37.398 7.736 1.00213.26 N ATOM 22 CA GLN 4 13.788 37.551 6.477 1.00213.26 C ATOM 23 CB GLN 4 13.625 36.229 5.703 1.00213.26 C ATOM 24 CG GLN 4 13.116 36.411 4.272 1.00213.26 C ATOM 25 CD GLN 4 13.306 35.090 3.533 1.00213.26 C ATOM 26 OE1 GLN 4 14.378 34.488 3.578 1.00213.26 O ATOM 27 NE2 GLN 4 12.239 34.622 2.834 1.00213.26 N ATOM 28 C GLN 4 12.443 38.134 6.759 1.00213.26 C ATOM 29 O GLN 4 11.930 38.030 7.871 1.00213.26 O ATOM 30 N GLY 5 11.842 38.793 5.750 1.00 74.86 N ATOM 31 CA GLY 5 10.568 39.415 5.954 1.00 74.86 C ATOM 32 C GLY 5 9.545 38.335 6.070 1.00 74.86 C ATOM 33 O GLY 5 9.787 37.179 5.728 1.00 74.86 O ATOM 34 N PRO 6 8.404 38.708 6.575 1.00 86.49 N ATOM 35 CA PRO 6 7.322 37.775 6.720 1.00 86.49 C ATOM 36 CD PRO 6 8.330 39.778 7.553 1.00 86.49 C ATOM 37 CB PRO 6 6.363 38.385 7.748 1.00 86.49 C ATOM 38 CG PRO 6 6.839 39.841 7.915 1.00 86.49 C ATOM 39 C PRO 6 6.711 37.517 5.387 1.00 86.49 C ATOM 40 O PRO 6 6.807 38.373 4.510 1.00 86.49 O ATOM 41 N TRP 7 6.088 36.338 5.203 1.00235.36 N ATOM 42 CA TRP 7 5.494 36.041 3.936 1.00235.36 C ATOM 43 CB TRP 7 6.232 34.937 3.162 1.00235.36 C ATOM 44 CG TRP 7 5.798 34.788 1.723 1.00235.36 C ATOM 45 CD2 TRP 7 5.744 33.540 1.016 1.00235.36 C ATOM 46 CD1 TRP 7 5.402 35.751 0.841 1.00235.36 C ATOM 47 NE1 TRP 7 5.114 35.181 -0.376 1.00235.36 N ATOM 48 CE2 TRP 7 5.318 33.821 -0.282 1.00235.36 C ATOM 49 CE3 TRP 7 6.028 32.265 1.414 1.00235.36 C ATOM 50 CZ2 TRP 7 5.167 32.827 -1.206 1.00235.36 C ATOM 51 CZ3 TRP 7 5.873 31.265 0.479 1.00235.36 C ATOM 52 CH2 TRP 7 5.452 31.540 -0.805 1.00235.36 C ATOM 53 C TRP 7 4.124 35.533 4.235 1.00235.36 C ATOM 54 O TRP 7 3.793 35.264 5.388 1.00235.36 O ATOM 55 N VAL 8 3.273 35.402 3.201 1.00117.36 N ATOM 56 CA VAL 8 1.952 34.923 3.470 1.00117.36 C ATOM 57 CB VAL 8 1.007 35.018 2.309 1.00117.36 C ATOM 58 CG1 VAL 8 0.799 36.503 1.969 1.00117.36 C ATOM 59 CG2 VAL 8 1.569 34.186 1.145 1.00117.36 C ATOM 60 C VAL 8 2.065 33.487 3.850 1.00117.36 C ATOM 61 O VAL 8 2.883 32.744 3.310 1.00117.36 O ATOM 62 N GLY 9 1.246 33.076 4.833 1.00 64.46 N ATOM 63 CA GLY 9 1.248 31.720 5.286 1.00 64.46 C ATOM 64 C GLY 9 0.882 31.760 6.730 1.00 64.46 C ATOM 65 O GLY 9 0.904 32.821 7.352 1.00 64.46 O ATOM 66 N SER 10 0.531 30.594 7.303 1.00 36.17 N ATOM 67 CA SER 10 0.174 30.570 8.689 1.00 36.17 C ATOM 68 CB SER 10 -1.341 30.463 8.927 1.00 36.17 C ATOM 69 OG SER 10 -1.817 29.206 8.467 1.00 36.17 O ATOM 70 C SER 10 0.776 29.345 9.282 1.00 36.17 C ATOM 71 O SER 10 0.935 28.331 8.605 1.00 36.17 O ATOM 72 N SER 11 1.151 29.417 10.574 1.00 92.10 N ATOM 73 CA SER 11 1.668 28.251 11.221 1.00 92.10 C ATOM 74 CB SER 11 2.558 28.543 12.440 1.00 92.10 C ATOM 75 OG SER 11 3.016 27.326 13.010 1.00 92.10 O ATOM 76 C SER 11 0.486 27.478 11.691 1.00 92.10 C ATOM 77 O SER 11 -0.619 28.014 11.766 1.00 92.10 O ATOM 78 N TYR 12 0.691 26.190 12.021 1.00230.78 N ATOM 79 CA TYR 12 -0.422 25.398 12.448 1.00230.78 C ATOM 80 CB TYR 12 -0.444 23.975 11.865 1.00230.78 C ATOM 81 CG TYR 12 -1.579 23.258 12.513 1.00230.78 C ATOM 82 CD1 TYR 12 -2.861 23.373 12.023 1.00230.78 C ATOM 83 CD2 TYR 12 -1.364 22.470 13.620 1.00230.78 C ATOM 84 CE1 TYR 12 -3.905 22.711 12.626 1.00230.78 C ATOM 85 CE2 TYR 12 -2.403 21.806 14.228 1.00230.78 C ATOM 86 CZ TYR 12 -3.676 21.925 13.730 1.00230.78 C ATOM 87 OH TYR 12 -4.745 21.244 14.350 1.00230.78 O ATOM 88 C TYR 12 -0.340 25.251 13.924 1.00230.78 C ATOM 89 O TYR 12 0.681 24.835 14.471 1.00230.78 O ATOM 90 N VAL 13 -1.437 25.620 14.608 1.00 70.42 N ATOM 91 CA VAL 13 -1.489 25.487 16.028 1.00 70.42 C ATOM 92 CB VAL 13 -1.721 26.786 16.738 1.00 70.42 C ATOM 93 CG1 VAL 13 -1.881 26.499 18.240 1.00 70.42 C ATOM 94 CG2 VAL 13 -0.565 27.743 16.399 1.00 70.42 C ATOM 95 C VAL 13 -2.664 24.619 16.319 1.00 70.42 C ATOM 96 O VAL 13 -3.691 24.704 15.647 1.00 70.42 O ATOM 97 N ALA 14 -2.535 23.732 17.321 1.00214.67 N ATOM 98 CA ALA 14 -3.642 22.887 17.644 1.00214.67 C ATOM 99 CB ALA 14 -3.258 21.661 18.490 1.00214.67 C ATOM 100 C ALA 14 -4.621 23.699 18.425 1.00214.67 C ATOM 101 O ALA 14 -4.245 24.607 19.164 1.00214.67 O ATOM 102 N GLU 15 -5.919 23.391 18.246 1.00298.37 N ATOM 103 CA GLU 15 -6.958 24.063 18.963 1.00298.37 C ATOM 104 CB GLU 15 -7.805 25.022 18.107 1.00298.37 C ATOM 105 CG GLU 15 -8.938 25.675 18.906 1.00298.37 C ATOM 106 CD GLU 15 -9.724 26.603 17.986 1.00298.37 C ATOM 107 OE1 GLU 15 -9.317 26.760 16.804 1.00298.37 O ATOM 108 OE2 GLU 15 -10.746 27.169 18.455 1.00298.37 O ATOM 109 C GLU 15 -7.894 23.008 19.435 1.00298.37 C ATOM 110 O GLU 15 -7.936 21.907 18.889 1.00298.37 O ATOM 111 N THR 16 -8.654 23.317 20.497 1.00234.08 N ATOM 112 CA THR 16 -9.642 22.387 20.933 1.00234.08 C ATOM 113 CB THR 16 -10.158 22.662 22.314 1.00234.08 C ATOM 114 OG1 THR 16 -11.060 21.639 22.708 1.00234.08 O ATOM 115 CG2 THR 16 -10.862 24.028 22.319 1.00234.08 C ATOM 116 C THR 16 -10.769 22.567 19.979 1.00234.08 C ATOM 117 O THR 16 -10.722 23.453 19.125 1.00234.08 O ATOM 118 N GLY 17 -11.809 21.722 20.070 1.00 97.09 N ATOM 119 CA GLY 17 -12.877 21.884 19.132 1.00 97.09 C ATOM 120 C GLY 17 -12.288 21.603 17.791 1.00 97.09 C ATOM 121 O GLY 17 -11.627 20.583 17.600 1.00 97.09 O ATOM 122 N GLN 18 -12.519 22.508 16.819 1.00227.21 N ATOM 123 CA GLN 18 -11.969 22.291 15.516 1.00227.21 C ATOM 124 CB GLN 18 -12.599 23.142 14.399 1.00227.21 C ATOM 125 CG GLN 18 -12.158 22.698 13.002 1.00227.21 C ATOM 126 CD GLN 18 -13.019 23.413 11.969 1.00227.21 C ATOM 127 OE1 GLN 18 -13.451 24.547 12.179 1.00227.21 O ATOM 128 NE2 GLN 18 -13.284 22.728 10.824 1.00227.21 N ATOM 129 C GLN 18 -10.511 22.599 15.592 1.00227.21 C ATOM 130 O GLN 18 -10.086 23.505 16.306 1.00227.21 O ATOM 131 N ASN 19 -9.713 21.817 14.843 1.00 80.55 N ATOM 132 CA ASN 19 -8.280 21.873 14.864 1.00 80.55 C ATOM 133 CB ASN 19 -7.640 20.790 13.982 1.00 80.55 C ATOM 134 CG ASN 19 -8.099 19.433 14.495 1.00 80.55 C ATOM 135 OD1 ASN 19 -8.863 19.344 15.456 1.00 80.55 O ATOM 136 ND2 ASN 19 -7.630 18.346 13.827 1.00 80.55 N ATOM 137 C ASN 19 -7.775 23.180 14.347 1.00 80.55 C ATOM 138 O ASN 19 -6.827 23.734 14.902 1.00 80.55 O ATOM 139 N TRP 20 -8.393 23.718 13.279 1.00218.35 N ATOM 140 CA TRP 20 -7.833 24.890 12.669 1.00218.35 C ATOM 141 CB TRP 20 -8.608 25.413 11.448 1.00218.35 C ATOM 142 CG TRP 20 -8.366 24.631 10.177 1.00218.35 C ATOM 143 CD2 TRP 20 -7.393 25.013 9.190 1.00218.35 C ATOM 144 CD1 TRP 20 -8.964 23.496 9.711 1.00218.35 C ATOM 145 NE1 TRP 20 -8.423 23.146 8.495 1.00218.35 N ATOM 146 CE2 TRP 20 -7.457 24.074 8.162 1.00218.35 C ATOM 147 CE3 TRP 20 -6.522 26.063 9.143 1.00218.35 C ATOM 148 CZ2 TRP 20 -6.647 24.171 7.067 1.00218.35 C ATOM 149 CZ3 TRP 20 -5.703 26.160 8.039 1.00218.35 C ATOM 150 CH2 TRP 20 -5.765 25.230 7.021 1.00218.35 C ATOM 151 C TRP 20 -7.690 26.007 13.646 1.00218.35 C ATOM 152 O TRP 20 -8.597 26.326 14.412 1.00218.35 O ATOM 153 N ALA 21 -6.477 26.594 13.638 1.00280.97 N ATOM 154 CA ALA 21 -6.078 27.718 14.430 1.00280.97 C ATOM 155 CB ALA 21 -5.823 27.382 15.910 1.00280.97 C ATOM 156 C ALA 21 -4.772 28.121 13.829 1.00280.97 C ATOM 157 O ALA 21 -4.180 27.340 13.088 1.00280.97 O ATOM 158 N SER 22 -4.279 29.344 14.098 1.00138.60 N ATOM 159 CA SER 22 -3.036 29.652 13.458 1.00138.60 C ATOM 160 CB SER 22 -3.181 30.610 12.265 1.00138.60 C ATOM 161 OG SER 22 -1.912 30.863 11.682 1.00138.60 O ATOM 162 C SER 22 -2.104 30.297 14.431 1.00138.60 C ATOM 163 O SER 22 -2.505 31.100 15.271 1.00138.60 O ATOM 164 N LEU 23 -0.812 29.928 14.330 1.00133.93 N ATOM 165 CA LEU 23 0.225 30.499 15.137 1.00133.93 C ATOM 166 CB LEU 23 1.586 29.806 14.917 1.00133.93 C ATOM 167 CG LEU 23 2.773 30.388 15.717 1.00133.93 C ATOM 168 CD1 LEU 23 3.239 31.741 15.154 1.00133.93 C ATOM 169 CD2 LEU 23 2.466 30.444 17.222 1.00133.93 C ATOM 170 C LEU 23 0.338 31.926 14.729 1.00133.93 C ATOM 171 O LEU 23 0.509 32.813 15.560 1.00133.93 O ATOM 172 N ALA 24 0.180 32.176 13.420 1.00 36.53 N ATOM 173 CA ALA 24 0.335 33.473 12.831 1.00 36.53 C ATOM 174 CB ALA 24 0.019 33.488 11.326 1.00 36.53 C ATOM 175 C ALA 24 -0.630 34.387 13.497 1.00 36.53 C ATOM 176 O ALA 24 -0.376 35.583 13.634 1.00 36.53 O ATOM 177 N ALA 25 -1.760 33.829 13.952 1.00 41.95 N ATOM 178 CA ALA 25 -2.799 34.624 14.523 1.00 41.95 C ATOM 179 CB ALA 25 -3.956 33.782 15.080 1.00 41.95 C ATOM 180 C ALA 25 -2.235 35.436 15.648 1.00 41.95 C ATOM 181 O ALA 25 -2.661 36.572 15.841 1.00 41.95 O ATOM 182 N ASN 26 -1.268 34.906 16.424 1.00 88.48 N ATOM 183 CA ASN 26 -0.786 35.707 17.518 1.00 88.48 C ATOM 184 CB ASN 26 0.287 35.042 18.410 1.00 88.48 C ATOM 185 CG ASN 26 1.663 35.022 17.748 1.00 88.48 C ATOM 186 OD1 ASN 26 1.819 34.720 16.568 1.00 88.48 O ATOM 187 ND2 ASN 26 2.711 35.365 18.545 1.00 88.48 N ATOM 188 C ASN 26 -0.188 36.961 16.955 1.00 88.48 C ATOM 189 O ASN 26 -0.340 38.039 17.526 1.00 88.48 O ATOM 190 N GLU 27 0.515 36.855 15.813 1.00 70.56 N ATOM 191 CA GLU 27 1.101 38.019 15.213 1.00 70.56 C ATOM 192 CB GLU 27 1.962 37.720 13.975 1.00 70.56 C ATOM 193 CG GLU 27 2.563 38.991 13.365 1.00 70.56 C ATOM 194 CD GLU 27 3.492 38.584 12.230 1.00 70.56 C ATOM 195 OE1 GLU 27 4.488 37.869 12.518 1.00 70.56 O ATOM 196 OE2 GLU 27 3.220 38.978 11.064 1.00 70.56 O ATOM 197 C GLU 27 -0.017 38.906 14.781 1.00 70.56 C ATOM 198 O GLU 27 0.072 40.129 14.868 1.00 70.56 O ATOM 199 N LEU 28 -1.118 38.285 14.321 1.00 39.59 N ATOM 200 CA LEU 28 -2.265 39.006 13.864 1.00 39.59 C ATOM 201 CB LEU 28 -3.396 38.075 13.398 1.00 39.59 C ATOM 202 CG LEU 28 -3.021 37.211 12.178 1.00 39.59 C ATOM 203 CD1 LEU 28 -4.191 36.308 11.761 1.00 39.59 C ATOM 204 CD2 LEU 28 -2.498 38.068 11.016 1.00 39.59 C ATOM 205 C LEU 28 -2.768 39.802 15.023 1.00 39.59 C ATOM 206 O LEU 28 -3.264 40.915 14.862 1.00 39.59 O ATOM 207 N ARG 29 -2.629 39.236 16.236 1.00123.59 N ATOM 208 CA ARG 29 -3.082 39.849 17.451 1.00123.59 C ATOM 209 CB ARG 29 -2.638 39.004 18.661 1.00123.59 C ATOM 210 CG ARG 29 -2.965 39.537 20.057 1.00123.59 C ATOM 211 CD ARG 29 -2.138 38.812 21.127 1.00123.59 C ATOM 212 NE ARG 29 -2.487 39.350 22.473 1.00123.59 N ATOM 213 CZ ARG 29 -3.333 38.650 23.284 1.00123.59 C ATOM 214 NH1 ARG 29 -3.887 37.482 22.845 1.00123.59 N ATOM 215 NH2 ARG 29 -3.610 39.100 24.542 1.00123.59 N ATOM 216 C ARG 29 -2.423 41.187 17.562 1.00123.59 C ATOM 217 O ARG 29 -3.079 42.194 17.827 1.00123.59 O ATOM 218 N VAL 30 -1.099 41.231 17.329 1.00 27.83 N ATOM 219 CA VAL 30 -0.365 42.458 17.436 1.00 27.83 C ATOM 220 CB VAL 30 1.108 42.279 17.196 1.00 27.83 C ATOM 221 CG1 VAL 30 1.796 43.649 17.326 1.00 27.83 C ATOM 222 CG2 VAL 30 1.648 41.215 18.169 1.00 27.83 C ATOM 223 C VAL 30 -0.880 43.411 16.404 1.00 27.83 C ATOM 224 O VAL 30 -1.063 44.596 16.675 1.00 27.83 O ATOM 225 N THR 31 -1.150 42.894 15.190 1.00 92.75 N ATOM 226 CA THR 31 -1.593 43.673 14.068 1.00 92.75 C ATOM 227 CB THR 31 -1.706 42.857 12.809 1.00 92.75 C ATOM 228 OG1 THR 31 -0.453 42.268 12.492 1.00 92.75 O ATOM 229 CG2 THR 31 -2.149 43.781 11.662 1.00 92.75 C ATOM 230 C THR 31 -2.938 44.259 14.377 1.00 92.75 C ATOM 231 O THR 31 -3.275 45.342 13.905 1.00 92.75 O ATOM 232 N GLU 32 -3.747 43.538 15.174 1.00 43.11 N ATOM 233 CA GLU 32 -5.074 43.957 15.529 1.00 43.11 C ATOM 234 CB GLU 32 -5.833 42.923 16.373 1.00 43.11 C ATOM 235 CG GLU 32 -6.163 41.647 15.598 1.00 43.11 C ATOM 236 CD GLU 32 -6.988 40.748 16.507 1.00 43.11 C ATOM 237 OE1 GLU 32 -7.388 41.226 17.601 1.00 43.11 O ATOM 238 OE2 GLU 32 -7.235 39.576 16.119 1.00 43.11 O ATOM 239 C GLU 32 -5.002 45.216 16.331 1.00 43.11 C ATOM 240 O GLU 32 -5.943 46.007 16.337 1.00 43.11 O ATOM 241 N ARG 33 -3.886 45.425 17.052 1.00 69.13 N ATOM 242 CA ARG 33 -3.755 46.580 17.894 1.00 69.13 C ATOM 243 CB ARG 33 -2.393 46.646 18.615 1.00 69.13 C ATOM 244 CG ARG 33 -2.350 47.626 19.790 1.00 69.13 C ATOM 245 CD ARG 33 -1.862 49.031 19.432 1.00 69.13 C ATOM 246 NE ARG 33 -1.888 49.834 20.689 1.00 69.13 N ATOM 247 CZ ARG 33 -3.020 50.514 21.041 1.00 69.13 C ATOM 248 NH1 ARG 33 -4.108 50.476 20.220 1.00 69.13 N ATOM 249 NH2 ARG 33 -3.065 51.227 22.205 1.00 69.13 N ATOM 250 C ARG 33 -3.899 47.809 17.046 1.00 69.13 C ATOM 251 O ARG 33 -4.541 48.771 17.463 1.00 69.13 O ATOM 252 N PRO 34 -3.340 47.820 15.868 1.00170.37 N ATOM 253 CA PRO 34 -3.502 48.970 15.024 1.00170.37 C ATOM 254 CD PRO 34 -2.047 47.185 15.654 1.00170.37 C ATOM 255 CB PRO 34 -2.509 48.790 13.882 1.00170.37 C ATOM 256 CG PRO 34 -1.364 47.996 14.540 1.00170.37 C ATOM 257 C PRO 34 -4.930 49.149 14.621 1.00170.37 C ATOM 258 O PRO 34 -5.271 50.221 14.125 1.00170.37 O ATOM 259 N PHE 35 -5.779 48.121 14.808 1.00174.74 N ATOM 260 CA PHE 35 -7.174 48.302 14.540 1.00174.74 C ATOM 261 CB PHE 35 -8.032 47.060 14.836 1.00174.74 C ATOM 262 CG PHE 35 -7.895 46.169 13.647 1.00174.74 C ATOM 263 CD1 PHE 35 -6.795 45.359 13.474 1.00174.74 C ATOM 264 CD2 PHE 35 -8.887 46.154 12.693 1.00174.74 C ATOM 265 CE1 PHE 35 -6.694 44.552 12.364 1.00174.74 C ATOM 266 CE2 PHE 35 -8.792 45.350 11.582 1.00174.74 C ATOM 267 CZ PHE 35 -7.690 44.545 11.417 1.00174.74 C ATOM 268 C PHE 35 -7.559 49.424 15.429 1.00174.74 C ATOM 269 O PHE 35 -8.333 50.298 15.037 1.00174.74 O ATOM 270 N TRP 36 -7.039 49.417 16.670 1.00196.71 N ATOM 271 CA TRP 36 -7.185 50.632 17.400 1.00196.71 C ATOM 272 CB TRP 36 -6.873 50.527 18.907 1.00196.71 C ATOM 273 CG TRP 36 -7.940 49.833 19.721 1.00196.71 C ATOM 274 CD2 TRP 36 -7.955 48.433 20.040 1.00196.71 C ATOM 275 CD1 TRP 36 -9.050 50.374 20.302 1.00196.71 C ATOM 276 NE1 TRP 36 -9.760 49.398 20.956 1.00196.71 N ATOM 277 CE2 TRP 36 -9.097 48.198 20.805 1.00196.71 C ATOM 278 CE3 TRP 36 -7.089 47.425 19.721 1.00196.71 C ATOM 279 CZ2 TRP 36 -9.394 46.947 21.263 1.00196.71 C ATOM 280 CZ3 TRP 36 -7.391 46.166 20.189 1.00196.71 C ATOM 281 CH2 TRP 36 -8.522 45.932 20.943 1.00196.71 C ATOM 282 C TRP 36 -6.143 51.489 16.763 1.00196.71 C ATOM 283 O TRP 36 -5.019 51.613 17.246 1.00196.71 O ATOM 284 N ILE 37 -6.532 52.092 15.626 1.00 84.64 N ATOM 285 CA ILE 37 -5.708 52.906 14.789 1.00 84.64 C ATOM 286 CB ILE 37 -6.448 53.455 13.600 1.00 84.64 C ATOM 287 CG1 ILE 37 -7.002 52.297 12.758 1.00 84.64 C ATOM 288 CG2 ILE 37 -5.516 54.383 12.801 1.00 84.64 C ATOM 289 CD1 ILE 37 -8.002 52.745 11.695 1.00 84.64 C ATOM 290 C ILE 37 -5.254 54.039 15.622 1.00 84.64 C ATOM 291 O ILE 37 -5.839 54.320 16.664 1.00 84.64 O ATOM 292 N SER 38 -4.128 54.662 15.242 1.00149.12 N ATOM 293 CA SER 38 -3.740 55.801 16.003 1.00149.12 C ATOM 294 CB SER 38 -2.479 56.498 15.466 1.00149.12 C ATOM 295 OG SER 38 -2.162 57.625 16.269 1.00149.12 O ATOM 296 C SER 38 -4.880 56.763 15.903 1.00149.12 C ATOM 297 O SER 38 -5.441 56.981 14.833 1.00149.12 O ATOM 298 N SER 39 -5.258 57.342 17.056 1.00187.73 N ATOM 299 CA SER 39 -6.332 58.286 17.121 1.00187.73 C ATOM 300 CB SER 39 -6.191 59.422 16.092 1.00187.73 C ATOM 301 OG SER 39 -7.285 60.320 16.204 1.00187.73 O ATOM 302 C SER 39 -7.627 57.586 16.865 1.00187.73 C ATOM 303 O SER 39 -8.677 58.221 16.787 1.00187.73 O ATOM 304 N PHE 40 -7.595 56.247 16.754 1.00 75.45 N ATOM 305 CA PHE 40 -8.817 55.517 16.603 1.00 75.45 C ATOM 306 CB PHE 40 -8.891 54.664 15.327 1.00 75.45 C ATOM 307 CG PHE 40 -10.289 54.154 15.239 1.00 75.45 C ATOM 308 CD1 PHE 40 -11.268 54.914 14.637 1.00 75.45 C ATOM 309 CD2 PHE 40 -10.624 52.927 15.764 1.00 75.45 C ATOM 310 CE1 PHE 40 -12.561 54.453 14.555 1.00 75.45 C ATOM 311 CE2 PHE 40 -11.915 52.460 15.686 1.00 75.45 C ATOM 312 CZ PHE 40 -12.885 53.225 15.081 1.00 75.45 C ATOM 313 C PHE 40 -8.856 54.590 17.772 1.00 75.45 C ATOM 314 O PHE 40 -7.931 53.813 18.002 1.00 75.45 O ATOM 315 N ILE 41 -9.935 54.646 18.565 1.00116.52 N ATOM 316 CA ILE 41 -9.938 53.835 19.740 1.00116.52 C ATOM 317 CB ILE 41 -9.420 54.581 20.944 1.00116.52 C ATOM 318 CG1 ILE 41 -9.072 53.634 22.104 1.00116.52 C ATOM 319 CG2 ILE 41 -10.444 55.669 21.307 1.00116.52 C ATOM 320 CD1 ILE 41 -8.319 54.328 23.240 1.00116.52 C ATOM 321 C ILE 41 -11.352 53.444 19.993 1.00116.52 C ATOM 322 O ILE 41 -12.235 53.686 19.173 1.00116.52 O ATOM 323 N GLY 42 -11.587 52.793 21.145 1.00133.49 N ATOM 324 CA GLY 42 -12.915 52.446 21.536 1.00133.49 C ATOM 325 C GLY 42 -13.430 53.719 22.106 1.00133.49 C ATOM 326 O GLY 42 -13.269 54.767 21.482 1.00133.49 O ATOM 327 N ARG 43 -14.079 53.681 23.283 1.00127.37 N ATOM 328 CA ARG 43 -14.533 54.931 23.806 1.00127.37 C ATOM 329 CB ARG 43 -15.277 54.793 25.147 1.00127.37 C ATOM 330 CG ARG 43 -15.918 56.092 25.637 1.00127.37 C ATOM 331 CD ARG 43 -17.185 56.483 24.870 1.00127.37 C ATOM 332 NE ARG 43 -18.341 55.820 25.541 1.00127.37 N ATOM 333 CZ ARG 43 -18.790 54.605 25.108 1.00127.37 C ATOM 334 NH1 ARG 43 -18.195 53.993 24.044 1.00127.37 N ATOM 335 NH2 ARG 43 -19.844 54.002 25.732 1.00127.37 N ATOM 336 C ARG 43 -13.299 55.731 24.046 1.00127.37 C ATOM 337 O ARG 43 -12.483 55.407 24.907 1.00127.37 O ATOM 338 N SER 44 -13.132 56.808 23.257 1.00 94.43 N ATOM 339 CA SER 44 -11.974 57.640 23.345 1.00 94.43 C ATOM 340 CB SER 44 -11.734 58.488 22.082 1.00 94.43 C ATOM 341 OG SER 44 -10.572 59.287 22.240 1.00 94.43 O ATOM 342 C SER 44 -12.174 58.563 24.489 1.00 94.43 C ATOM 343 O SER 44 -13.258 58.628 25.066 1.00 94.43 O ATOM 344 N LYS 45 -11.113 59.300 24.851 1.00166.97 N ATOM 345 CA LYS 45 -11.238 60.189 25.959 1.00166.97 C ATOM 346 CB LYS 45 -9.919 60.905 26.300 1.00166.97 C ATOM 347 CG LYS 45 -9.348 61.714 25.132 1.00166.97 C ATOM 348 CD LYS 45 -8.170 62.610 25.516 1.00166.97 C ATOM 349 CE LYS 45 -8.554 63.771 26.435 1.00166.97 C ATOM 350 NZ LYS 45 -8.723 63.279 27.821 1.00166.97 N ATOM 351 C LYS 45 -12.267 61.214 25.612 1.00166.97 C ATOM 352 O LYS 45 -12.045 62.106 24.795 1.00166.97 O TER END