####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS401_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 4.96 13.90 LONGEST_CONTINUOUS_SEGMENT: 25 18 - 42 4.85 14.35 LONGEST_CONTINUOUS_SEGMENT: 25 19 - 43 4.93 14.59 LCS_AVERAGE: 51.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.90 13.98 LONGEST_CONTINUOUS_SEGMENT: 10 35 - 44 1.95 17.53 LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 1.30 19.36 LCS_AVERAGE: 18.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.90 13.98 LCS_AVERAGE: 14.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 19 3 3 3 3 4 4 4 8 10 10 10 13 14 18 19 20 21 22 24 25 LCS_GDT V 3 V 3 3 5 19 3 3 3 3 6 6 8 12 14 16 16 16 18 19 20 21 23 26 27 29 LCS_GDT Q 4 Q 4 4 5 19 3 4 4 6 7 7 8 12 14 16 16 16 18 19 20 24 26 27 28 30 LCS_GDT G 5 G 5 4 5 19 0 3 4 6 7 7 8 12 14 16 16 16 18 21 23 24 26 28 30 32 LCS_GDT P 6 P 6 4 5 19 3 4 4 6 7 7 8 12 14 16 16 16 18 20 23 24 26 28 30 34 LCS_GDT W 7 W 7 4 5 19 3 4 4 6 7 7 7 11 12 16 16 16 18 20 23 24 26 30 32 34 LCS_GDT V 8 V 8 4 5 19 3 4 4 5 6 7 8 12 14 16 16 16 18 21 23 24 26 30 32 34 LCS_GDT G 9 G 9 4 9 19 3 4 5 5 7 8 9 12 14 16 16 17 19 21 24 28 29 30 32 34 LCS_GDT S 10 S 10 7 9 19 6 7 7 8 8 8 9 11 12 16 16 17 19 21 24 28 29 30 32 34 LCS_GDT S 11 S 11 7 9 19 6 7 7 8 8 8 9 12 14 16 16 16 18 21 23 24 26 29 32 34 LCS_GDT Y 12 Y 12 7 9 19 6 7 7 8 8 8 9 12 14 16 16 16 18 21 23 24 26 28 32 34 LCS_GDT V 13 V 13 7 9 19 6 7 7 8 8 8 9 12 14 16 16 17 19 21 24 28 29 30 32 34 LCS_GDT A 14 A 14 7 9 19 6 7 7 8 8 8 9 12 14 16 16 17 19 21 24 28 29 30 32 34 LCS_GDT E 15 E 15 7 9 19 6 7 7 8 8 8 9 11 14 16 16 16 18 21 23 24 26 30 32 34 LCS_GDT T 16 T 16 7 9 19 4 7 7 8 8 8 9 12 14 16 16 17 19 21 24 28 29 30 32 34 LCS_GDT G 17 G 17 5 9 25 3 4 6 8 8 8 9 11 14 16 16 18 20 23 25 28 29 30 32 34 LCS_GDT Q 18 Q 18 4 4 25 3 3 4 5 6 7 9 12 14 16 17 19 23 23 25 28 29 30 32 34 LCS_GDT N 19 N 19 4 4 25 3 3 4 7 8 9 11 16 16 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT W 20 W 20 10 10 25 4 7 8 10 10 10 14 16 17 19 20 20 23 23 25 25 28 30 32 34 LCS_GDT A 21 A 21 10 10 25 6 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT S 22 S 22 10 10 25 6 9 9 10 10 10 10 12 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT L 23 L 23 10 10 25 6 9 9 10 10 10 13 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT A 24 A 24 10 10 25 6 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT A 25 A 25 10 10 25 6 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT N 26 N 26 10 10 25 6 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT E 27 E 27 10 10 25 5 9 9 10 10 10 11 15 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT L 28 L 28 10 10 25 5 9 9 10 10 10 10 11 13 15 19 20 23 23 25 28 29 30 32 34 LCS_GDT R 29 R 29 10 10 25 5 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT V 30 V 30 3 7 25 3 6 6 6 6 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT T 31 T 31 3 7 25 3 6 6 6 7 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT E 32 E 32 3 7 25 3 3 3 4 7 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT R 33 R 33 4 7 25 3 6 6 7 8 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT P 34 P 34 4 7 25 2 6 6 7 8 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT F 35 F 35 4 10 25 2 6 6 7 8 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT W 36 W 36 6 10 25 4 6 9 9 10 10 13 16 17 19 20 20 22 23 25 28 29 30 32 34 LCS_GDT I 37 I 37 6 10 25 4 5 9 9 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT S 38 S 38 6 10 25 4 6 9 9 10 10 11 15 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT S 39 S 39 6 10 25 4 6 9 9 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 LCS_GDT F 40 F 40 6 10 25 4 6 9 9 10 10 10 10 14 17 19 20 23 23 25 28 29 30 32 34 LCS_GDT I 41 I 41 6 10 25 4 5 9 9 10 10 10 10 14 17 19 20 23 23 25 27 29 30 32 33 LCS_GDT G 42 G 42 6 10 25 3 4 9 9 10 10 10 10 14 17 19 20 21 23 24 25 26 29 31 32 LCS_GDT R 43 R 43 6 10 25 3 6 9 9 10 10 10 10 11 12 13 20 21 22 22 24 25 26 28 32 LCS_GDT S 44 S 44 6 10 15 3 6 9 9 10 10 10 10 11 11 11 13 14 15 18 23 23 24 26 27 LCS_GDT K 45 K 45 5 10 14 3 3 6 9 10 10 10 10 11 11 11 11 11 12 12 12 12 12 15 16 LCS_AVERAGE LCS_A: 28.03 ( 14.05 18.96 51.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 9 10 10 10 14 16 17 19 20 20 23 23 25 28 29 30 32 34 GDT PERCENT_AT 13.64 20.45 20.45 22.73 22.73 22.73 31.82 36.36 38.64 43.18 45.45 45.45 52.27 52.27 56.82 63.64 65.91 68.18 72.73 77.27 GDT RMS_LOCAL 0.22 0.63 0.63 0.90 0.90 0.90 2.90 3.03 3.21 3.40 3.59 3.59 4.51 4.34 4.96 6.16 6.24 6.38 6.73 7.08 GDT RMS_ALL_AT 13.87 14.31 14.31 13.98 13.98 13.98 16.90 17.29 16.72 17.02 16.32 16.32 14.41 15.28 13.90 10.89 10.82 10.78 10.36 10.19 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 38.750 0 0.480 0.506 41.119 0.000 0.000 - LGA V 3 V 3 32.194 0 0.265 0.909 34.261 0.000 0.000 28.999 LGA Q 4 Q 4 33.921 0 0.374 1.070 40.217 0.000 0.000 39.453 LGA G 5 G 5 32.213 0 0.000 0.000 33.485 0.000 0.000 - LGA P 6 P 6 29.894 0 0.568 0.503 32.334 0.000 0.000 30.540 LGA W 7 W 7 25.269 0 0.190 1.260 27.569 0.000 0.000 25.058 LGA V 8 V 8 23.524 0 0.110 0.193 25.226 0.000 0.000 23.184 LGA G 9 G 9 20.018 0 0.549 0.549 22.611 0.000 0.000 - LGA S 10 S 10 24.226 0 0.628 0.599 25.454 0.000 0.000 25.093 LGA S 11 S 11 25.958 0 0.058 0.654 29.856 0.000 0.000 29.856 LGA Y 12 Y 12 22.797 0 0.057 1.422 23.807 0.000 0.000 22.613 LGA V 13 V 13 19.235 0 0.052 0.073 20.479 0.000 0.000 18.722 LGA A 14 A 14 21.536 0 0.045 0.054 23.542 0.000 0.000 - LGA E 15 E 15 21.611 0 0.008 0.926 27.949 0.000 0.000 26.697 LGA T 16 T 16 17.421 0 0.259 1.269 18.731 0.000 0.000 17.044 LGA G 17 G 17 13.974 0 0.227 0.227 15.280 0.000 0.000 - LGA Q 18 Q 18 10.030 0 0.639 1.464 11.733 0.000 0.000 11.117 LGA N 19 N 19 6.410 0 0.064 0.858 10.004 0.455 0.227 9.046 LGA W 20 W 20 2.621 0 0.632 1.286 11.557 32.727 9.740 11.557 LGA A 21 A 21 3.009 0 0.060 0.072 3.877 22.727 20.364 - LGA S 22 S 22 4.695 0 0.066 0.620 6.113 7.273 5.152 4.743 LGA L 23 L 23 3.611 0 0.130 0.165 7.222 16.818 8.636 6.317 LGA A 24 A 24 1.935 0 0.000 0.020 2.839 45.455 44.000 - LGA A 25 A 25 2.687 0 0.138 0.132 3.654 35.909 30.909 - LGA N 26 N 26 1.697 0 0.000 0.969 7.701 54.545 28.636 6.376 LGA E 27 E 27 5.229 0 0.042 0.902 8.207 4.545 2.020 7.174 LGA L 28 L 28 6.913 0 0.174 1.094 11.700 0.000 0.000 7.441 LGA R 29 R 29 4.068 0 0.312 1.799 13.435 9.091 3.471 13.435 LGA V 30 V 30 3.462 0 0.592 1.050 6.497 14.091 9.870 6.497 LGA T 31 T 31 2.748 0 0.677 0.641 5.714 48.636 30.130 3.944 LGA E 32 E 32 2.924 0 0.560 1.329 8.392 20.909 9.293 7.393 LGA R 33 R 33 2.619 0 0.131 1.247 13.386 24.545 8.926 13.386 LGA P 34 P 34 2.722 0 0.313 0.502 3.393 25.000 26.234 3.017 LGA F 35 F 35 2.974 0 0.580 1.418 9.127 18.636 9.421 9.109 LGA W 36 W 36 3.516 0 0.663 0.635 14.501 30.455 8.701 14.004 LGA I 37 I 37 3.676 0 0.136 0.804 7.242 19.545 9.773 6.966 LGA S 38 S 38 5.802 0 0.087 0.616 6.591 0.909 0.606 5.803 LGA S 39 S 39 3.243 0 0.071 0.148 7.166 11.364 12.424 3.880 LGA F 40 F 40 8.945 0 0.095 1.529 13.450 0.000 0.000 13.316 LGA I 41 I 41 12.112 0 0.643 1.176 13.422 0.000 0.000 12.515 LGA G 42 G 42 13.882 0 0.065 0.065 15.882 0.000 0.000 - LGA R 43 R 43 16.032 0 0.136 1.184 17.651 0.000 0.000 16.405 LGA S 44 S 44 21.786 0 0.097 0.599 25.284 0.000 0.000 22.214 LGA K 45 K 45 28.185 0 0.610 0.601 37.658 0.000 0.000 37.658 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.585 9.417 10.996 10.083 6.330 1.195 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 3.03 35.795 30.367 0.511 LGA_LOCAL RMSD: 3.031 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.293 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.585 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.148303 * X + 0.900477 * Y + 0.408836 * Z + 228.326218 Y_new = 0.852537 * X + 0.325922 * Y + -0.408602 * Z + -81.143517 Z_new = -0.501185 * X + 0.287951 * Y + -0.816025 * Z + 176.755768 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.743028 0.524968 2.802364 [DEG: 99.8681 30.0785 160.5636 ] ZXZ: 0.785684 2.525297 -1.049308 [DEG: 45.0164 144.6889 -60.1209 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS401_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 3.03 30.367 9.58 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS401_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 REFINED PARENT N/A ATOM 9 N ALA 2 -19.757 25.847 -8.046 1.00 10.70 ATOM 10 CA ALA 2 -20.571 27.046 -7.779 1.00 10.70 ATOM 11 C ALA 2 -20.564 27.474 -6.291 1.00 10.70 ATOM 12 O ALA 2 -21.616 27.655 -5.673 1.00 10.70 ATOM 13 CB ALA 2 -21.974 26.786 -8.349 1.00 10.80 ATOM 14 N VAL 3 -19.372 27.604 -5.691 1.00 10.20 ATOM 15 CA VAL 3 -19.178 28.017 -4.280 1.00 10.20 ATOM 16 C VAL 3 -19.448 29.522 -4.093 1.00 10.20 ATOM 17 O VAL 3 -18.525 30.331 -4.015 1.00 10.20 ATOM 18 CB VAL 3 -17.806 27.564 -3.721 1.00 10.50 ATOM 19 CG1 VAL 3 -17.826 26.062 -3.424 1.00 10.50 ATOM 20 CG2 VAL 3 -16.609 27.843 -4.636 1.00 10.50 ATOM 21 N GLN 4 -20.737 29.882 -4.029 1.00 10.90 ATOM 22 CA GLN 4 -21.274 31.251 -3.919 1.00 10.90 ATOM 23 C GLN 4 -20.695 32.189 -4.996 1.00 10.90 ATOM 24 O GLN 4 -19.905 33.095 -4.725 1.00 10.90 ATOM 25 CB GLN 4 -21.143 31.794 -2.485 1.00 11.90 ATOM 26 CG GLN 4 -21.696 30.906 -1.352 1.00 11.90 ATOM 27 CD GLN 4 -23.211 30.665 -1.357 1.00 11.90 ATOM 28 OE1 GLN 4 -23.914 30.786 -2.352 1.00 11.90 ATOM 29 NE2 GLN 4 -23.773 30.262 -0.236 1.00 11.90 ATOM 30 N GLY 5 -21.097 31.927 -6.244 1.00 10.20 ATOM 31 CA GLY 5 -20.508 32.487 -7.467 1.00 10.20 ATOM 32 C GLY 5 -19.570 31.465 -8.133 1.00 10.20 ATOM 33 O GLY 5 -19.319 30.400 -7.558 1.00 10.20 ATOM 34 N PRO 6 -19.038 31.744 -9.337 1.00 8.40 ATOM 35 CA PRO 6 -18.154 30.818 -10.054 1.00 8.40 ATOM 36 C PRO 6 -16.814 30.684 -9.318 1.00 8.40 ATOM 37 O PRO 6 -15.975 31.574 -9.392 1.00 8.40 ATOM 38 CB PRO 6 -17.995 31.436 -11.448 1.00 9.00 ATOM 39 CG PRO 6 -18.119 32.932 -11.174 1.00 9.00 ATOM 40 CD PRO 6 -19.191 32.988 -10.086 1.00 9.00 ATOM 41 N TRP 7 -16.613 29.608 -8.555 1.00 6.40 ATOM 42 CA TRP 7 -15.417 29.390 -7.721 1.00 6.40 ATOM 43 C TRP 7 -15.024 30.585 -6.804 1.00 6.40 ATOM 44 O TRP 7 -13.851 30.744 -6.469 1.00 6.40 ATOM 45 CB TRP 7 -14.245 28.907 -8.596 1.00 5.70 ATOM 46 CG TRP 7 -14.498 27.761 -9.536 1.00 5.70 ATOM 47 CD1 TRP 7 -14.333 26.450 -9.237 1.00 5.70 ATOM 48 CD2 TRP 7 -14.915 27.794 -10.940 1.00 5.70 ATOM 49 NE1 TRP 7 -14.595 25.678 -10.355 1.00 5.70 ATOM 50 CE2 TRP 7 -14.962 26.454 -11.433 1.00 5.70 ATOM 51 CE3 TRP 7 -15.215 28.820 -11.863 1.00 5.70 ATOM 52 CZ2 TRP 7 -15.298 26.149 -12.761 1.00 5.70 ATOM 53 CZ3 TRP 7 -15.555 28.527 -13.198 1.00 5.70 ATOM 54 CH2 TRP 7 -15.599 27.196 -13.649 1.00 5.70 ATOM 55 N VAL 8 -15.970 31.455 -6.411 1.00 7.70 ATOM 56 CA VAL 8 -15.665 32.743 -5.741 1.00 7.70 ATOM 57 C VAL 8 -15.369 32.614 -4.238 1.00 7.70 ATOM 58 O VAL 8 -14.332 33.108 -3.796 1.00 7.70 ATOM 59 CB VAL 8 -16.749 33.803 -6.047 1.00 8.10 ATOM 60 CG1 VAL 8 -16.802 34.967 -5.050 1.00 8.10 ATOM 61 CG2 VAL 8 -16.505 34.434 -7.426 1.00 8.10 ATOM 62 N GLY 9 -16.234 31.974 -3.443 1.00 9.90 ATOM 63 CA GLY 9 -16.018 31.843 -1.995 1.00 9.90 ATOM 64 C GLY 9 -17.268 31.517 -1.173 1.00 9.90 ATOM 65 O GLY 9 -18.043 32.413 -0.866 1.00 9.90 ATOM 66 N SER 10 -17.435 30.253 -0.772 1.00 10.50 ATOM 67 CA SER 10 -18.436 29.785 0.204 1.00 10.50 ATOM 68 C SER 10 -17.888 29.742 1.640 1.00 10.50 ATOM 69 O SER 10 -16.706 29.984 1.887 1.00 10.50 ATOM 70 CB SER 10 -18.865 28.370 -0.192 1.00 10.10 ATOM 71 OG SER 10 -17.741 27.512 -0.068 1.00 10.10 ATOM 72 N SER 11 -18.722 29.346 2.602 1.00 10.70 ATOM 73 CA SER 11 -18.293 29.016 3.971 1.00 10.70 ATOM 74 C SER 11 -17.305 27.833 4.006 1.00 10.70 ATOM 75 O SER 11 -16.416 27.806 4.856 1.00 10.70 ATOM 76 CB SER 11 -19.531 28.706 4.821 1.00 11.50 ATOM 77 OG SER 11 -20.283 27.648 4.241 1.00 11.50 ATOM 78 N TYR 12 -17.373 26.898 3.050 1.00 9.30 ATOM 79 CA TYR 12 -16.395 25.805 2.911 1.00 9.30 ATOM 80 C TYR 12 -15.039 26.312 2.390 1.00 9.30 ATOM 81 O TYR 12 -13.984 25.873 2.852 1.00 9.30 ATOM 82 CB TYR 12 -16.961 24.707 1.994 1.00 9.60 ATOM 83 CG TYR 12 -18.395 24.294 2.291 1.00 9.60 ATOM 84 CD1 TYR 12 -19.354 24.291 1.258 1.00 9.60 ATOM 85 CD2 TYR 12 -18.779 23.939 3.600 1.00 9.60 ATOM 86 CE1 TYR 12 -20.696 23.958 1.534 1.00 9.60 ATOM 87 CE2 TYR 12 -20.119 23.607 3.881 1.00 9.60 ATOM 88 CZ TYR 12 -21.083 23.621 2.850 1.00 9.60 ATOM 89 OH TYR 12 -22.378 23.302 3.131 1.00 9.60 ATOM 90 N VAL 13 -15.059 27.302 1.486 1.00 7.10 ATOM 91 CA VAL 13 -13.853 28.031 1.045 1.00 7.10 ATOM 92 C VAL 13 -13.255 28.864 2.192 1.00 7.10 ATOM 93 O VAL 13 -12.034 28.992 2.290 1.00 7.10 ATOM 94 CB VAL 13 -14.172 28.883 -0.202 1.00 6.70 ATOM 95 CG1 VAL 13 -13.000 29.756 -0.646 1.00 6.70 ATOM 96 CG2 VAL 13 -14.554 28.021 -1.410 1.00 6.70 ATOM 97 N ALA 14 -14.078 29.385 3.108 1.00 7.90 ATOM 98 CA ALA 14 -13.617 30.027 4.345 1.00 7.90 ATOM 99 C ALA 14 -12.902 29.039 5.280 1.00 7.90 ATOM 100 O ALA 14 -11.789 29.315 5.725 1.00 7.90 ATOM 101 CB ALA 14 -14.810 30.667 5.066 1.00 8.50 ATOM 102 N GLU 15 -13.517 27.879 5.532 1.00 8.40 ATOM 103 CA GLU 15 -13.056 26.854 6.483 1.00 8.40 ATOM 104 C GLU 15 -11.605 26.412 6.229 1.00 8.40 ATOM 105 O GLU 15 -10.849 26.208 7.181 1.00 8.40 ATOM 106 CB GLU 15 -14.021 25.655 6.420 1.00 9.60 ATOM 107 CG GLU 15 -13.724 24.580 7.480 1.00 9.60 ATOM 108 CD GLU 15 -14.681 23.368 7.429 1.00 9.60 ATOM 109 OE1 GLU 15 -15.502 23.237 6.488 1.00 9.60 ATOM 110 OE2 GLU 15 -14.602 22.514 8.346 1.00 9.60 ATOM 111 N THR 16 -11.189 26.347 4.956 1.00 6.60 ATOM 112 CA THR 16 -9.792 26.069 4.572 1.00 6.60 ATOM 113 C THR 16 -8.826 27.071 5.207 1.00 6.60 ATOM 114 O THR 16 -8.002 26.690 6.036 1.00 6.60 ATOM 115 CB THR 16 -9.633 26.000 3.039 1.00 6.80 ATOM 116 OG1 THR 16 -10.114 24.752 2.589 1.00 6.80 ATOM 117 CG2 THR 16 -8.186 26.148 2.539 1.00 6.80 ATOM 118 N GLY 17 -8.926 28.360 4.863 1.00 5.60 ATOM 119 CA GLY 17 -8.012 29.374 5.409 1.00 5.60 ATOM 120 C GLY 17 -8.199 29.574 6.913 1.00 5.60 ATOM 121 O GLY 17 -7.218 29.731 7.633 1.00 5.60 ATOM 122 N GLN 18 -9.441 29.494 7.405 1.00 7.40 ATOM 123 CA GLN 18 -9.796 29.754 8.805 1.00 7.40 ATOM 124 C GLN 18 -9.048 28.846 9.795 1.00 7.40 ATOM 125 O GLN 18 -8.652 29.309 10.866 1.00 7.40 ATOM 126 CB GLN 18 -11.323 29.599 8.961 1.00 8.00 ATOM 127 CG GLN 18 -11.870 29.867 10.374 1.00 8.00 ATOM 128 CD GLN 18 -11.570 31.282 10.864 1.00 8.00 ATOM 129 OE1 GLN 18 -12.359 32.204 10.699 1.00 8.00 ATOM 130 NE2 GLN 18 -10.420 31.513 11.461 1.00 8.00 ATOM 131 N ASN 19 -8.838 27.576 9.442 1.00 7.30 ATOM 132 CA ASN 19 -8.220 26.592 10.335 1.00 7.30 ATOM 133 C ASN 19 -6.715 26.838 10.542 1.00 7.30 ATOM 134 O ASN 19 -6.236 26.766 11.676 1.00 7.30 ATOM 135 CB ASN 19 -8.516 25.179 9.803 1.00 7.50 ATOM 136 CG ASN 19 -9.972 24.752 9.974 1.00 7.50 ATOM 137 OD1 ASN 19 -10.822 25.459 10.503 1.00 7.50 ATOM 138 ND2 ASN 19 -10.298 23.546 9.569 1.00 7.50 ATOM 139 N TRP 20 -5.969 27.180 9.481 1.00 5.80 ATOM 140 CA TRP 20 -4.564 27.596 9.622 1.00 5.80 ATOM 141 C TRP 20 -4.435 29.027 10.169 1.00 5.80 ATOM 142 O TRP 20 -3.519 29.318 10.941 1.00 5.80 ATOM 143 CB TRP 20 -3.824 27.437 8.292 1.00 5.80 ATOM 144 CG TRP 20 -2.346 27.656 8.418 1.00 5.80 ATOM 145 CD1 TRP 20 -1.691 28.793 8.098 1.00 5.80 ATOM 146 CD2 TRP 20 -1.342 26.779 9.022 1.00 5.80 ATOM 147 NE1 TRP 20 -0.365 28.687 8.466 1.00 5.80 ATOM 148 CE2 TRP 20 -0.095 27.474 9.061 1.00 5.80 ATOM 149 CE3 TRP 20 -1.366 25.476 9.567 1.00 5.80 ATOM 150 CZ2 TRP 20 1.062 26.917 9.628 1.00 5.80 ATOM 151 CZ3 TRP 20 -0.207 24.900 10.125 1.00 5.80 ATOM 152 CH2 TRP 20 1.002 25.618 10.161 1.00 5.80 ATOM 153 N ALA 21 -5.382 29.915 9.837 1.00 6.20 ATOM 154 CA ALA 21 -5.380 31.314 10.266 1.00 6.20 ATOM 155 C ALA 21 -5.389 31.501 11.791 1.00 6.20 ATOM 156 O ALA 21 -4.932 32.542 12.243 1.00 6.20 ATOM 157 CB ALA 21 -6.546 32.066 9.613 1.00 6.40 ATOM 158 N SER 22 -5.780 30.514 12.605 1.00 6.70 ATOM 159 CA SER 22 -5.604 30.564 14.072 1.00 6.70 ATOM 160 C SER 22 -4.144 30.795 14.509 1.00 6.70 ATOM 161 O SER 22 -3.901 31.410 15.548 1.00 6.70 ATOM 162 CB SER 22 -6.116 29.266 14.711 1.00 6.80 ATOM 163 OG SER 22 -7.504 29.099 14.451 1.00 6.80 ATOM 164 N LEU 23 -3.165 30.359 13.702 1.00 6.30 ATOM 165 CA LEU 23 -1.723 30.551 13.931 1.00 6.30 ATOM 166 C LEU 23 -1.162 31.851 13.310 1.00 6.30 ATOM 167 O LEU 23 -0.027 32.226 13.604 1.00 6.30 ATOM 168 CB LEU 23 -0.979 29.293 13.437 1.00 6.70 ATOM 169 CG LEU 23 -1.346 28.016 14.224 1.00 6.70 ATOM 170 CD1 LEU 23 -0.886 26.768 13.474 1.00 6.70 ATOM 171 CD2 LEU 23 -0.710 28.005 15.618 1.00 6.70 ATOM 172 N ALA 24 -1.957 32.562 12.501 1.00 6.00 ATOM 173 CA ALA 24 -1.657 33.901 11.974 1.00 6.00 ATOM 174 C ALA 24 -2.381 35.015 12.766 1.00 6.00 ATOM 175 O ALA 24 -1.798 36.052 13.072 1.00 6.00 ATOM 176 CB ALA 24 -2.023 33.904 10.488 1.00 6.10 ATOM 177 N ALA 25 -3.623 34.762 13.199 1.00 6.90 ATOM 178 CA ALA 25 -4.401 35.575 14.141 1.00 6.90 ATOM 179 C ALA 25 -3.732 35.679 15.530 1.00 6.90 ATOM 180 O ALA 25 -4.030 36.589 16.303 1.00 6.90 ATOM 181 CB ALA 25 -5.821 35.000 14.219 1.00 6.90 ATOM 182 N ASN 26 -2.760 34.805 15.810 1.00 6.80 ATOM 183 CA ASN 26 -1.843 34.909 16.944 1.00 6.80 ATOM 184 C ASN 26 -1.101 36.270 16.960 1.00 6.80 ATOM 185 O ASN 26 -0.813 36.799 18.033 1.00 6.80 ATOM 186 CB ASN 26 -0.867 33.727 16.825 1.00 7.00 ATOM 187 CG ASN 26 0.128 33.671 17.971 1.00 7.00 ATOM 188 OD1 ASN 26 -0.158 33.168 19.049 1.00 7.00 ATOM 189 ND2 ASN 26 1.326 34.171 17.775 1.00 7.00 ATOM 190 N GLU 27 -0.851 36.871 15.786 1.00 6.70 ATOM 191 CA GLU 27 -0.261 38.211 15.640 1.00 6.70 ATOM 192 C GLU 27 -1.320 39.335 15.600 1.00 6.70 ATOM 193 O GLU 27 -1.038 40.442 16.057 1.00 6.70 ATOM 194 CB GLU 27 0.639 38.259 14.390 1.00 7.30 ATOM 195 CG GLU 27 2.122 37.927 14.631 1.00 7.30 ATOM 196 CD GLU 27 2.471 36.422 14.692 1.00 7.30 ATOM 197 OE1 GLU 27 1.840 35.652 15.455 1.00 7.30 ATOM 198 OE2 GLU 27 3.433 36.004 14.003 1.00 7.30 ATOM 199 N LEU 28 -2.558 39.072 15.139 1.00 6.70 ATOM 200 CA LEU 28 -3.687 40.019 15.282 1.00 6.70 ATOM 201 C LEU 28 -3.974 40.337 16.767 1.00 6.70 ATOM 202 O LEU 28 -4.471 41.417 17.080 1.00 6.70 ATOM 203 CB LEU 28 -4.979 39.462 14.630 1.00 7.10 ATOM 204 CG LEU 28 -5.193 39.769 13.137 1.00 7.10 ATOM 205 CD1 LEU 28 -4.179 39.124 12.190 1.00 7.10 ATOM 206 CD2 LEU 28 -6.582 39.291 12.710 1.00 7.10 ATOM 207 N ARG 29 -3.643 39.413 17.682 1.00 7.10 ATOM 208 CA ARG 29 -3.922 39.485 19.129 1.00 7.10 ATOM 209 C ARG 29 -3.410 40.758 19.826 1.00 7.10 ATOM 210 O ARG 29 -4.026 41.194 20.799 1.00 7.10 ATOM 211 CB ARG 29 -3.321 38.221 19.777 1.00 6.80 ATOM 212 CG ARG 29 -3.736 37.949 21.235 1.00 6.80 ATOM 213 CD ARG 29 -5.248 37.780 21.441 1.00 6.80 ATOM 214 NE ARG 29 -5.788 36.673 20.622 1.00 6.80 ATOM 215 CZ ARG 29 -6.941 36.635 19.975 1.00 6.80 ATOM 216 NH1 ARG 29 -7.243 35.604 19.237 1.00 6.80 ATOM 217 NH2 ARG 29 -7.809 37.605 20.045 1.00 6.80 ATOM 218 N VAL 30 -2.312 41.359 19.350 1.00 6.90 ATOM 219 CA VAL 30 -1.713 42.577 19.950 1.00 6.90 ATOM 220 C VAL 30 -2.337 43.900 19.464 1.00 6.90 ATOM 221 O VAL 30 -1.931 44.969 19.926 1.00 6.90 ATOM 222 CB VAL 30 -0.171 42.595 19.847 1.00 6.80 ATOM 223 CG1 VAL 30 0.446 41.336 20.470 1.00 6.80 ATOM 224 CG2 VAL 30 0.365 42.757 18.422 1.00 6.80 ATOM 225 N THR 31 -3.335 43.855 18.573 1.00 6.80 ATOM 226 CA THR 31 -4.099 45.021 18.077 1.00 6.80 ATOM 227 C THR 31 -5.615 44.737 18.053 1.00 6.80 ATOM 228 O THR 31 -6.071 43.662 18.450 1.00 6.80 ATOM 229 CB THR 31 -3.607 45.485 16.686 1.00 7.20 ATOM 230 OG1 THR 31 -4.046 44.598 15.682 1.00 7.20 ATOM 231 CG2 THR 31 -2.090 45.616 16.549 1.00 7.20 ATOM 232 N GLU 32 -6.420 45.710 17.609 1.00 6.10 ATOM 233 CA GLU 32 -7.879 45.576 17.413 1.00 6.10 ATOM 234 C GLU 32 -8.281 45.624 15.919 1.00 6.10 ATOM 235 O GLU 32 -9.422 45.952 15.577 1.00 6.10 ATOM 236 CB GLU 32 -8.620 46.627 18.264 1.00 6.40 ATOM 237 CG GLU 32 -8.307 46.567 19.771 1.00 6.40 ATOM 238 CD GLU 32 -8.652 45.220 20.443 1.00 6.40 ATOM 239 OE1 GLU 32 -9.607 44.526 20.015 1.00 6.40 ATOM 240 OE2 GLU 32 -7.993 44.867 21.452 1.00 6.40 ATOM 241 N ARG 33 -7.328 45.330 15.019 1.00 5.20 ATOM 242 CA ARG 33 -7.423 45.481 13.550 1.00 5.20 ATOM 243 C ARG 33 -6.756 44.299 12.818 1.00 5.20 ATOM 244 O ARG 33 -5.959 43.584 13.426 1.00 5.20 ATOM 245 CB ARG 33 -6.781 46.829 13.142 1.00 6.00 ATOM 246 CG ARG 33 -7.612 48.043 13.598 1.00 6.00 ATOM 247 CD ARG 33 -7.011 49.380 13.143 1.00 6.00 ATOM 248 NE ARG 33 -7.041 49.553 11.672 1.00 6.00 ATOM 249 CZ ARG 33 -8.044 50.002 10.934 1.00 6.00 ATOM 250 NH1 ARG 33 -7.886 50.170 9.651 1.00 6.00 ATOM 251 NH2 ARG 33 -9.209 50.290 11.437 1.00 6.00 ATOM 252 N PRO 34 -7.046 44.066 11.522 1.00 4.60 ATOM 253 CA PRO 34 -6.375 43.033 10.719 1.00 4.60 ATOM 254 C PRO 34 -4.874 43.342 10.493 1.00 4.60 ATOM 255 O PRO 34 -4.478 44.014 9.542 1.00 4.60 ATOM 256 CB PRO 34 -7.208 42.951 9.432 1.00 4.70 ATOM 257 CG PRO 34 -7.822 44.341 9.288 1.00 4.70 ATOM 258 CD PRO 34 -8.102 44.707 10.741 1.00 4.70 ATOM 259 N PHE 35 -4.013 42.837 11.383 1.00 4.00 ATOM 260 CA PHE 35 -2.583 43.184 11.460 1.00 4.00 ATOM 261 C PHE 35 -1.740 42.734 10.249 1.00 4.00 ATOM 262 O PHE 35 -1.027 43.550 9.665 1.00 4.00 ATOM 263 CB PHE 35 -2.035 42.607 12.771 1.00 4.90 ATOM 264 CG PHE 35 -0.569 42.904 13.009 1.00 4.90 ATOM 265 CD1 PHE 35 -0.162 44.200 13.380 1.00 4.90 ATOM 266 CD2 PHE 35 0.389 41.887 12.847 1.00 4.90 ATOM 267 CE1 PHE 35 1.200 44.473 13.601 1.00 4.90 ATOM 268 CE2 PHE 35 1.746 42.156 13.086 1.00 4.90 ATOM 269 CZ PHE 35 2.154 43.449 13.461 1.00 4.90 ATOM 270 N TRP 36 -1.878 41.472 9.812 1.00 4.20 ATOM 271 CA TRP 36 -1.182 40.909 8.628 1.00 4.20 ATOM 272 C TRP 36 -1.558 41.587 7.297 1.00 4.20 ATOM 273 O TRP 36 -0.859 41.462 6.292 1.00 4.20 ATOM 274 CB TRP 36 -1.469 39.401 8.554 1.00 4.40 ATOM 275 CG TRP 36 -0.499 38.562 9.321 1.00 4.40 ATOM 276 CD1 TRP 36 -0.715 37.957 10.511 1.00 4.40 ATOM 277 CD2 TRP 36 0.877 38.247 8.952 1.00 4.40 ATOM 278 NE1 TRP 36 0.435 37.297 10.904 1.00 4.40 ATOM 279 CE2 TRP 36 1.452 37.450 9.987 1.00 4.40 ATOM 280 CE3 TRP 36 1.697 38.557 7.843 1.00 4.40 ATOM 281 CZ2 TRP 36 2.778 36.993 9.931 1.00 4.40 ATOM 282 CZ3 TRP 36 3.024 38.092 7.772 1.00 4.40 ATOM 283 CH2 TRP 36 3.565 37.314 8.813 1.00 4.40 ATOM 284 N ILE 37 -2.686 42.295 7.294 1.00 4.40 ATOM 285 CA ILE 37 -3.145 43.189 6.226 1.00 4.40 ATOM 286 C ILE 37 -2.487 44.571 6.358 1.00 4.40 ATOM 287 O ILE 37 -1.922 45.078 5.392 1.00 4.40 ATOM 288 CB ILE 37 -4.685 43.211 6.314 1.00 4.70 ATOM 289 CG1 ILE 37 -5.249 42.022 5.509 1.00 4.70 ATOM 290 CG2 ILE 37 -5.337 44.554 5.956 1.00 4.70 ATOM 291 CD1 ILE 37 -6.624 41.545 5.995 1.00 4.70 ATOM 292 N SER 38 -2.507 45.170 7.553 1.00 4.60 ATOM 293 CA SER 38 -1.954 46.509 7.800 1.00 4.60 ATOM 294 C SER 38 -0.441 46.595 7.525 1.00 4.60 ATOM 295 O SER 38 0.048 47.611 7.025 1.00 4.60 ATOM 296 CB SER 38 -2.284 46.920 9.241 1.00 4.60 ATOM 297 OG SER 38 -1.907 48.264 9.495 1.00 4.60 ATOM 298 N SER 39 0.308 45.515 7.770 1.00 4.60 ATOM 299 CA SER 39 1.745 45.429 7.463 1.00 4.60 ATOM 300 C SER 39 2.071 45.360 5.957 1.00 4.60 ATOM 301 O SER 39 3.179 45.729 5.561 1.00 4.60 ATOM 302 CB SER 39 2.343 44.225 8.190 1.00 4.60 ATOM 303 OG SER 39 1.745 43.015 7.762 1.00 4.60 ATOM 304 N PHE 40 1.125 44.945 5.103 1.00 5.40 ATOM 305 CA PHE 40 1.294 44.872 3.643 1.00 5.40 ATOM 306 C PHE 40 1.315 46.264 2.984 1.00 5.40 ATOM 307 O PHE 40 2.199 46.563 2.181 1.00 5.40 ATOM 308 CB PHE 40 0.151 44.013 3.072 1.00 5.40 ATOM 309 CG PHE 40 0.235 43.592 1.612 1.00 5.40 ATOM 310 CD1 PHE 40 0.488 42.245 1.296 1.00 5.40 ATOM 311 CD2 PHE 40 -0.077 44.492 0.573 1.00 5.40 ATOM 312 CE1 PHE 40 0.372 41.782 -0.026 1.00 5.40 ATOM 313 CE2 PHE 40 -0.146 44.038 -0.759 1.00 5.40 ATOM 314 CZ PHE 40 0.051 42.680 -1.057 1.00 5.40 ATOM 315 N ILE 41 0.363 47.134 3.353 1.00 5.60 ATOM 316 CA ILE 41 0.089 48.402 2.647 1.00 5.60 ATOM 317 C ILE 41 1.239 49.427 2.672 1.00 5.60 ATOM 318 O ILE 41 1.368 50.214 1.734 1.00 5.60 ATOM 319 CB ILE 41 -1.227 49.058 3.165 1.00 5.60 ATOM 320 CG1 ILE 41 -1.077 49.926 4.438 1.00 5.60 ATOM 321 CG2 ILE 41 -2.354 48.016 3.335 1.00 5.60 ATOM 322 CD1 ILE 41 -2.348 50.690 4.835 1.00 5.60 ATOM 323 N GLY 42 2.054 49.422 3.735 1.00 6.00 ATOM 324 CA GLY 42 2.984 50.510 4.072 1.00 6.00 ATOM 325 C GLY 42 4.359 50.594 3.393 1.00 6.00 ATOM 326 O GLY 42 5.025 51.616 3.582 1.00 6.00 ATOM 327 N ARG 43 4.844 49.560 2.687 1.00 6.60 ATOM 328 CA ARG 43 6.239 49.482 2.176 1.00 6.60 ATOM 329 C ARG 43 6.325 48.642 0.888 1.00 6.60 ATOM 330 O ARG 43 5.950 47.475 0.946 1.00 6.60 ATOM 331 CB ARG 43 7.160 48.812 3.236 1.00 6.60 ATOM 332 CG ARG 43 7.153 49.335 4.685 1.00 6.60 ATOM 333 CD ARG 43 7.845 50.689 4.880 1.00 6.60 ATOM 334 NE ARG 43 7.799 51.097 6.301 1.00 6.60 ATOM 335 CZ ARG 43 6.861 51.802 6.911 1.00 6.60 ATOM 336 NH1 ARG 43 6.951 52.046 8.188 1.00 6.60 ATOM 337 NH2 ARG 43 5.820 52.275 6.283 1.00 6.60 ATOM 338 N SER 44 6.823 49.177 -0.243 1.00 7.20 ATOM 339 CA SER 44 7.169 48.389 -1.461 1.00 7.20 ATOM 340 C SER 44 7.797 49.173 -2.631 1.00 7.20 ATOM 341 O SER 44 7.701 50.402 -2.695 1.00 7.20 ATOM 342 CB SER 44 5.921 47.745 -2.081 1.00 7.50 ATOM 343 OG SER 44 6.288 46.666 -2.932 1.00 7.50 ATOM 344 N LYS 45 8.380 48.418 -3.582 1.00 7.60 ATOM 345 CA LYS 45 8.753 48.829 -4.951 1.00 7.60 ATOM 346 C LYS 45 8.997 47.623 -5.877 1.00 7.60 ATOM 347 O LYS 45 8.501 47.622 -7.004 1.00 7.60 ATOM 348 CB LYS 45 9.943 49.809 -4.974 1.00 7.70 ATOM 349 CG LYS 45 10.143 50.334 -6.408 1.00 7.70 ATOM 350 CD LYS 45 11.004 51.598 -6.476 1.00 7.70 ATOM 351 CE LYS 45 11.173 52.000 -7.949 1.00 7.70 ATOM 352 NZ LYS 45 11.941 53.264 -8.094 1.00 7.70 TER END