####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS390_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS390_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.60 4.60 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 15 - 30 2.00 6.00 LONGEST_CONTINUOUS_SEGMENT: 16 16 - 31 1.92 5.93 LCS_AVERAGE: 28.31 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.64 5.97 LCS_AVERAGE: 16.58 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 3 3 3 4 10 17 26 27 31 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 4 5 7 11 11 19 26 27 31 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 4 5 10 17 22 27 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 3 8 44 3 4 12 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 3 8 44 4 4 4 6 16 21 27 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 3 8 44 4 4 4 6 11 21 25 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 3 8 44 4 4 4 8 18 23 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 10 12 13 15 17 23 28 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 11 44 7 8 12 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 11 44 7 8 9 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 11 44 7 8 12 15 20 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 11 44 7 8 9 16 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 13 44 7 8 9 11 19 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 16 44 7 8 9 13 19 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 16 44 4 8 9 16 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 16 44 4 6 9 14 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 16 44 3 3 3 6 11 19 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 16 44 4 4 5 16 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 16 44 8 12 13 15 18 22 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 16 44 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 16 44 5 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 16 44 5 11 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 4 6 13 23 28 31 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 3 3 6 12 17 21 27 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 14 44 0 3 4 5 9 14 16 23 26 30 35 39 41 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 14 44 3 7 12 15 20 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 5 10 44 3 4 7 13 19 23 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 5 10 44 4 5 8 13 19 23 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 5 6 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 27 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 9 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 6 10 44 4 5 7 11 11 11 14 24 30 36 39 40 41 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 6 10 44 4 5 7 11 11 11 14 17 22 27 34 39 41 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 6 10 44 3 5 7 11 11 11 14 15 17 18 26 31 34 36 37 42 43 43 43 43 LCS_GDT K 45 K 45 6 10 44 0 4 7 11 11 11 13 14 15 18 19 20 24 24 30 35 37 39 40 43 LCS_AVERAGE LCS_A: 48.30 ( 16.58 28.31 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 17 21 25 30 32 35 37 39 40 41 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 38.64 47.73 56.82 68.18 72.73 79.55 84.09 88.64 90.91 93.18 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.37 0.47 0.64 1.49 1.75 2.01 2.41 2.54 2.79 2.98 3.18 3.35 3.50 3.72 3.72 3.72 4.05 4.05 4.05 4.05 GDT RMS_ALL_AT 5.88 5.95 5.94 4.87 5.02 5.15 5.26 5.25 5.08 5.05 4.90 4.81 4.81 4.72 4.72 4.72 4.64 4.64 4.64 4.64 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.384 0 0.370 0.378 8.315 0.000 0.000 - LGA V 3 V 3 5.977 0 0.189 1.102 6.454 0.455 0.260 6.454 LGA Q 4 Q 4 4.903 0 0.043 1.157 10.967 11.818 5.253 10.602 LGA G 5 G 5 2.399 0 0.302 0.302 5.597 15.455 15.455 - LGA P 6 P 6 5.289 0 0.068 0.215 6.896 0.000 0.000 6.896 LGA W 7 W 7 5.826 0 0.164 1.285 11.340 1.818 1.039 7.433 LGA V 8 V 8 3.566 0 0.379 1.321 6.151 26.364 17.403 3.915 LGA G 9 G 9 4.004 0 0.553 0.553 4.004 19.545 19.545 - LGA S 10 S 10 1.629 0 0.127 0.613 2.856 63.636 55.455 2.856 LGA S 11 S 11 1.959 0 0.033 0.648 4.586 55.455 40.303 4.586 LGA Y 12 Y 12 2.723 0 0.100 0.703 10.095 41.818 14.848 10.095 LGA V 13 V 13 2.367 0 0.089 1.123 6.667 44.545 30.909 6.667 LGA A 14 A 14 2.894 0 0.013 0.029 4.048 25.455 22.545 - LGA E 15 E 15 3.232 0 0.075 0.990 4.490 18.636 19.192 2.478 LGA T 16 T 16 1.652 0 0.095 0.129 1.799 50.909 57.403 0.589 LGA G 17 G 17 2.064 0 0.662 0.662 3.045 36.364 36.364 - LGA Q 18 Q 18 3.881 0 0.657 1.094 10.173 16.818 7.475 7.473 LGA N 19 N 19 2.451 0 0.491 1.019 7.428 41.364 21.591 4.824 LGA W 20 W 20 3.597 0 0.508 1.004 12.139 29.091 8.312 12.139 LGA A 21 A 21 1.488 0 0.046 0.066 2.169 62.727 63.273 - LGA S 22 S 22 1.487 0 0.033 0.635 2.195 61.818 56.061 1.618 LGA L 23 L 23 1.826 0 0.071 1.418 6.541 54.545 30.909 4.971 LGA A 24 A 24 1.784 0 0.008 0.035 1.986 54.545 53.818 - LGA A 25 A 25 0.715 0 0.032 0.037 1.291 77.727 82.182 - LGA N 26 N 26 0.392 0 0.050 0.089 1.024 90.909 86.591 0.867 LGA E 27 E 27 1.087 0 0.089 0.186 1.810 65.909 64.040 1.408 LGA L 28 L 28 1.554 0 0.062 1.447 5.448 54.545 34.545 5.448 LGA R 29 R 29 1.435 0 0.031 1.401 8.256 61.818 32.397 8.256 LGA V 30 V 30 1.497 0 0.195 1.121 3.338 73.636 59.221 3.338 LGA T 31 T 31 2.099 0 0.654 0.976 6.660 31.818 20.519 3.670 LGA E 32 E 32 5.901 0 0.421 1.122 10.392 2.273 1.010 10.392 LGA R 33 R 33 4.625 0 0.030 0.154 8.260 0.909 2.810 8.106 LGA P 34 P 34 7.157 0 0.604 0.602 9.101 0.000 0.000 9.101 LGA F 35 F 35 2.945 0 0.562 0.862 9.546 21.818 9.752 9.546 LGA W 36 W 36 3.813 0 0.612 0.576 11.323 23.636 6.753 11.323 LGA I 37 I 37 3.427 0 0.090 0.866 6.193 33.182 17.500 6.193 LGA S 38 S 38 2.510 0 0.057 0.108 4.421 28.636 20.909 4.413 LGA S 39 S 39 2.806 0 0.105 0.690 4.892 24.545 21.818 4.233 LGA F 40 F 40 3.608 0 0.149 0.698 8.797 14.545 5.785 8.797 LGA I 41 I 41 2.499 0 0.033 0.619 6.584 22.273 17.727 4.775 LGA G 42 G 42 8.670 0 0.022 0.022 11.916 0.000 0.000 - LGA R 43 R 43 10.702 0 0.392 1.369 14.592 0.000 0.000 14.592 LGA S 44 S 44 13.855 0 0.419 0.867 16.957 0.000 0.000 15.149 LGA K 45 K 45 18.452 0 0.604 0.975 25.492 0.000 0.000 25.492 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.602 4.633 6.203 30.940 24.113 11.532 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 32 2.54 58.523 54.415 1.213 LGA_LOCAL RMSD: 2.538 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.248 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.602 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.686601 * X + -0.517901 * Y + -0.510253 * Z + 37.525913 Y_new = 0.375075 * X + -0.348897 * Y + 0.858831 * Z + -24.106125 Z_new = -0.622814 * X + -0.781057 * Y + -0.045301 * Z + 95.830254 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.499981 0.672335 -1.628732 [DEG: 28.6468 38.5220 -93.3195 ] ZXZ: -2.605504 1.616113 -2.468439 [DEG: -149.2844 92.5965 -141.4312 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS390_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS390_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 32 2.54 54.415 4.60 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS390_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 8.800 42.118 11.772 1.00 16.45 ATOM 21 CA ALA 2 8.739 42.789 10.469 1.00 16.45 ATOM 22 C ALA 2 9.868 42.559 9.449 1.00 16.45 ATOM 23 O ALA 2 10.742 43.405 9.321 1.00 16.45 ATOM 24 CB ALA 2 8.189 44.217 10.629 1.00 16.45 ATOM 30 N VAL 3 9.917 41.379 8.809 1.00 14.33 ATOM 31 CA VAL 3 10.891 41.023 7.736 1.00 14.33 ATOM 32 C VAL 3 10.279 41.182 6.337 1.00 14.33 ATOM 33 O VAL 3 9.154 41.641 6.227 1.00 14.33 ATOM 34 CB VAL 3 11.373 39.569 7.905 1.00 14.33 ATOM 35 CG1 VAL 3 11.990 39.370 9.282 1.00 14.33 ATOM 36 CG2 VAL 3 10.212 38.611 7.691 1.00 14.33 ATOM 46 N GLN 4 10.978 40.872 5.241 1.00 10.59 ATOM 47 CA GLN 4 10.442 41.015 3.869 1.00 10.59 ATOM 48 C GLN 4 9.503 39.855 3.502 1.00 10.59 ATOM 49 O GLN 4 9.652 38.746 4.023 1.00 10.59 ATOM 50 CB GLN 4 11.584 41.097 2.854 1.00 10.59 ATOM 51 CG GLN 4 11.126 41.260 1.414 1.00 10.59 ATOM 52 CD GLN 4 10.332 42.533 1.200 1.00 10.59 ATOM 53 OE1 GLN 4 9.112 42.559 1.383 1.00 10.59 ATOM 54 NE2 GLN 4 11.020 43.601 0.811 1.00 10.59 ATOM 63 N GLY 5 8.564 40.131 2.584 1.00 9.35 ATOM 64 CA GLY 5 7.615 39.173 1.993 1.00 9.35 ATOM 65 C GLY 5 6.157 39.410 2.434 1.00 9.35 ATOM 66 O GLY 5 5.802 38.962 3.519 1.00 9.35 ATOM 70 N PRO 6 5.300 40.114 1.664 1.00 7.97 ATOM 71 CA PRO 6 3.982 40.561 2.144 1.00 7.97 ATOM 72 C PRO 6 2.993 39.452 2.534 1.00 7.97 ATOM 73 O PRO 6 2.118 39.700 3.357 1.00 7.97 ATOM 74 CB PRO 6 3.421 41.446 1.026 1.00 7.97 ATOM 75 CG PRO 6 4.234 41.036 -0.202 1.00 7.97 ATOM 76 CD PRO 6 5.617 40.751 0.376 1.00 7.97 ATOM 84 N TRP 7 3.130 38.231 2.016 1.00 6.85 ATOM 85 CA TRP 7 2.182 37.151 2.310 1.00 6.85 ATOM 86 C TRP 7 2.564 36.539 3.658 1.00 6.85 ATOM 87 O TRP 7 3.371 35.612 3.704 1.00 6.85 ATOM 88 CB TRP 7 2.201 36.081 1.217 1.00 6.85 ATOM 89 CG TRP 7 1.114 35.060 1.359 1.00 6.85 ATOM 90 CD1 TRP 7 -0.138 35.267 1.855 1.00 6.85 ATOM 91 CD2 TRP 7 1.175 33.658 1.000 1.00 6.85 ATOM 92 NE1 TRP 7 -0.857 34.097 1.831 1.00 6.85 ATOM 93 CE2 TRP 7 -0.068 33.103 1.310 1.00 6.85 ATOM 94 CE3 TRP 7 2.172 32.844 0.448 1.00 6.85 ATOM 95 CZ2 TRP 7 -0.349 31.763 1.089 1.00 6.85 ATOM 96 CZ3 TRP 7 1.890 31.501 0.226 1.00 6.85 ATOM 97 CH2 TRP 7 0.662 30.976 0.537 1.00 6.85 ATOM 108 N VAL 8 1.981 37.081 4.737 1.00 5.50 ATOM 109 CA VAL 8 2.028 36.562 6.122 1.00 5.50 ATOM 110 C VAL 8 3.086 35.491 6.403 1.00 5.50 ATOM 111 O VAL 8 2.834 34.461 7.018 1.00 5.50 ATOM 112 CB VAL 8 0.651 35.979 6.490 1.00 5.50 ATOM 113 CG1 VAL 8 -0.432 37.039 6.348 1.00 5.50 ATOM 114 CG2 VAL 8 0.347 34.776 5.609 1.00 5.50 ATOM 124 N GLY 9 4.308 35.796 5.970 1.00 5.15 ATOM 125 CA GLY 9 5.568 35.131 6.302 1.00 5.15 ATOM 126 C GLY 9 5.452 33.641 6.405 1.00 5.15 ATOM 127 O GLY 9 5.570 33.155 7.509 1.00 5.15 ATOM 131 N SER 10 5.260 32.947 5.287 1.00 5.32 ATOM 132 CA SER 10 5.031 31.496 5.268 1.00 5.32 ATOM 133 C SER 10 5.841 30.717 6.312 1.00 5.32 ATOM 134 O SER 10 5.278 29.925 7.064 1.00 5.32 ATOM 135 CB SER 10 5.355 30.958 3.888 1.00 5.32 ATOM 136 OG SER 10 4.461 31.456 2.932 1.00 5.32 ATOM 142 N SER 11 7.142 31.019 6.436 1.00 4.97 ATOM 143 CA SER 11 7.982 30.404 7.461 1.00 4.97 ATOM 144 C SER 11 7.592 30.781 8.904 1.00 4.97 ATOM 145 O SER 11 7.505 29.880 9.718 1.00 4.97 ATOM 146 CB SER 11 9.427 30.790 7.214 1.00 4.97 ATOM 147 OG SER 11 9.900 30.226 6.021 1.00 4.97 ATOM 153 N TYR 12 7.277 32.043 9.217 1.00 4.71 ATOM 154 CA TYR 12 6.813 32.497 10.543 1.00 4.71 ATOM 155 C TYR 12 5.452 31.898 10.975 1.00 4.71 ATOM 156 O TYR 12 5.312 31.346 12.073 1.00 4.71 ATOM 157 CB TYR 12 6.733 34.024 10.561 1.00 4.71 ATOM 158 CG TYR 12 5.856 34.577 11.663 1.00 4.71 ATOM 159 CD1 TYR 12 5.779 33.920 12.882 1.00 4.71 ATOM 160 CD2 TYR 12 5.131 35.740 11.454 1.00 4.71 ATOM 161 CE1 TYR 12 4.978 34.424 13.888 1.00 4.71 ATOM 162 CE2 TYR 12 4.329 36.244 12.461 1.00 4.71 ATOM 163 CZ TYR 12 4.253 35.591 13.674 1.00 4.71 ATOM 164 OH TYR 12 3.455 36.093 14.676 1.00 4.71 ATOM 174 N VAL 13 4.445 31.942 10.100 1.00 5.00 ATOM 175 CA VAL 13 3.167 31.279 10.363 1.00 5.00 ATOM 176 C VAL 13 3.245 29.755 10.344 1.00 5.00 ATOM 177 O VAL 13 2.508 29.127 11.094 1.00 5.00 ATOM 178 CB VAL 13 2.127 31.732 9.321 1.00 5.00 ATOM 179 CG1 VAL 13 1.831 33.216 9.475 1.00 5.00 ATOM 180 CG2 VAL 13 2.631 31.425 7.919 1.00 5.00 ATOM 190 N ALA 14 4.120 29.128 9.551 1.00 4.54 ATOM 191 CA ALA 14 4.264 27.675 9.602 1.00 4.54 ATOM 192 C ALA 14 4.733 27.196 10.993 1.00 4.54 ATOM 193 O ALA 14 4.257 26.171 11.490 1.00 4.54 ATOM 194 CB ALA 14 5.181 27.206 8.465 1.00 4.54 ATOM 200 N GLU 15 5.622 27.986 11.601 1.00 4.50 ATOM 201 CA GLU 15 6.201 27.861 12.947 1.00 4.50 ATOM 202 C GLU 15 5.136 27.770 14.039 1.00 4.50 ATOM 203 O GLU 15 5.171 26.852 14.857 1.00 4.50 ATOM 204 CB GLU 15 7.124 29.047 13.235 1.00 4.50 ATOM 205 CG GLU 15 7.841 28.976 14.575 1.00 4.50 ATOM 206 CD GLU 15 8.641 30.212 14.877 1.00 4.50 ATOM 207 OE1 GLU 15 8.049 31.237 15.113 1.00 4.50 ATOM 208 OE2 GLU 15 9.847 30.130 14.872 1.00 4.50 ATOM 215 N THR 16 4.206 28.736 14.039 1.00 5.20 ATOM 216 CA THR 16 3.089 28.788 14.990 1.00 5.20 ATOM 217 C THR 16 2.056 27.678 14.766 1.00 5.20 ATOM 218 O THR 16 1.474 27.193 15.738 1.00 5.20 ATOM 219 CB THR 16 2.384 30.156 14.922 1.00 5.20 ATOM 220 OG1 THR 16 1.820 30.341 13.617 1.00 5.20 ATOM 221 CG2 THR 16 3.369 31.279 15.209 1.00 5.20 ATOM 229 N GLY 17 1.848 27.216 13.526 1.00 5.72 ATOM 230 CA GLY 17 0.869 26.177 13.197 1.00 5.72 ATOM 231 C GLY 17 0.215 26.291 11.813 1.00 5.72 ATOM 232 O GLY 17 0.395 27.243 11.063 1.00 5.72 ATOM 236 N GLN 18 -0.630 25.306 11.491 1.00 5.29 ATOM 237 CA GLN 18 -1.318 25.198 10.190 1.00 5.29 ATOM 238 C GLN 18 -2.314 26.336 9.842 1.00 5.29 ATOM 239 O GLN 18 -2.420 26.725 8.685 1.00 5.29 ATOM 240 CB GLN 18 -2.059 23.859 10.133 1.00 5.29 ATOM 241 CG GLN 18 -1.146 22.646 10.050 1.00 5.29 ATOM 242 CD GLN 18 -1.918 21.340 10.050 1.00 5.29 ATOM 243 OE1 GLN 18 -3.029 21.260 10.581 1.00 5.29 ATOM 244 NE2 GLN 18 -1.333 20.308 9.454 1.00 5.29 ATOM 253 N ASN 19 -3.016 26.919 10.821 1.00 4.56 ATOM 254 CA ASN 19 -4.012 27.992 10.621 1.00 4.56 ATOM 255 C ASN 19 -3.286 29.358 10.604 1.00 4.56 ATOM 256 O ASN 19 -3.399 30.190 11.513 1.00 4.56 ATOM 257 CB ASN 19 -5.083 27.951 11.695 1.00 4.56 ATOM 258 CG ASN 19 -5.912 26.698 11.638 1.00 4.56 ATOM 259 OD1 ASN 19 -6.287 26.236 10.554 1.00 4.56 ATOM 260 ND2 ASN 19 -6.207 26.140 12.785 1.00 4.56 ATOM 267 N TRP 20 -2.431 29.487 9.583 1.00 4.78 ATOM 268 CA TRP 20 -1.349 30.464 9.444 1.00 4.78 ATOM 269 C TRP 20 -1.588 31.859 10.030 1.00 4.78 ATOM 270 O TRP 20 -1.097 32.180 11.110 1.00 4.78 ATOM 271 CB TRP 20 -1.021 30.620 7.957 1.00 4.78 ATOM 272 CG TRP 20 -0.117 29.548 7.428 1.00 4.78 ATOM 273 CD1 TRP 20 0.210 28.379 8.048 1.00 4.78 ATOM 274 CD2 TRP 20 0.584 29.541 6.162 1.00 4.78 ATOM 275 NE1 TRP 20 1.064 27.649 7.259 1.00 4.78 ATOM 276 CE2 TRP 20 1.302 28.344 6.100 1.00 4.78 ATOM 277 CE3 TRP 20 0.658 30.441 5.091 1.00 4.78 ATOM 278 CZ2 TRP 20 2.091 28.017 5.008 1.00 4.78 ATOM 279 CZ3 TRP 20 1.448 30.113 3.996 1.00 4.78 ATOM 280 CH2 TRP 20 2.145 28.931 3.956 1.00 4.78 ATOM 291 N ALA 21 -2.294 32.711 9.290 1.00 3.73 ATOM 292 CA ALA 21 -2.370 34.129 9.612 1.00 3.73 ATOM 293 C ALA 21 -3.161 34.427 10.901 1.00 3.73 ATOM 294 O ALA 21 -2.756 35.268 11.708 1.00 3.73 ATOM 295 CB ALA 21 -2.930 34.827 8.370 1.00 3.73 ATOM 301 N SER 22 -4.278 33.719 11.101 1.00 3.55 ATOM 302 CA SER 22 -5.170 33.865 12.255 1.00 3.55 ATOM 303 C SER 22 -4.479 33.495 13.570 1.00 3.55 ATOM 304 O SER 22 -4.583 34.233 14.550 1.00 3.55 ATOM 305 CB SER 22 -6.401 32.999 12.066 1.00 3.55 ATOM 306 OG SER 22 -7.179 33.458 10.994 1.00 3.55 ATOM 312 N LEU 23 -3.730 32.379 13.589 1.00 3.18 ATOM 313 CA LEU 23 -2.978 31.961 14.774 1.00 3.18 ATOM 314 C LEU 23 -1.802 32.892 15.084 1.00 3.18 ATOM 315 O LEU 23 -1.652 33.298 16.233 1.00 3.18 ATOM 316 CB LEU 23 -2.457 30.531 14.581 1.00 3.18 ATOM 317 CG LEU 23 -1.672 29.943 15.761 1.00 3.18 ATOM 318 CD1 LEU 23 -2.538 29.975 17.013 1.00 3.18 ATOM 319 CD2 LEU 23 -1.244 28.521 15.428 1.00 3.18 ATOM 331 N ALA 24 -1.029 33.277 14.064 1.00 3.02 ATOM 332 CA ALA 24 0.081 34.209 14.214 1.00 3.02 ATOM 333 C ALA 24 -0.395 35.575 14.752 1.00 3.02 ATOM 334 O ALA 24 0.255 36.159 15.609 1.00 3.02 ATOM 335 CB ALA 24 0.789 34.324 12.865 1.00 3.02 ATOM 341 N ALA 25 -1.556 36.077 14.314 1.00 3.32 ATOM 342 CA ALA 25 -2.136 37.299 14.883 1.00 3.32 ATOM 343 C ALA 25 -2.426 37.194 16.388 1.00 3.32 ATOM 344 O ALA 25 -2.132 38.116 17.166 1.00 3.32 ATOM 345 CB ALA 25 -3.396 37.657 14.080 1.00 3.32 ATOM 351 N ASN 26 -2.970 36.041 16.783 1.00 3.52 ATOM 352 CA ASN 26 -3.216 35.756 18.185 1.00 3.52 ATOM 353 C ASN 26 -1.917 35.632 19.000 1.00 3.52 ATOM 354 O ASN 26 -1.831 36.264 20.055 1.00 3.52 ATOM 355 CB ASN 26 -4.052 34.496 18.316 1.00 3.52 ATOM 356 CG ASN 26 -5.487 34.710 17.921 1.00 3.52 ATOM 357 OD1 ASN 26 -5.970 35.847 17.883 1.00 3.52 ATOM 358 ND2 ASN 26 -6.178 33.638 17.628 1.00 3.52 ATOM 365 N GLU 27 -0.924 34.874 18.514 1.00 3.85 ATOM 366 CA GLU 27 0.388 34.645 19.149 1.00 3.85 ATOM 367 C GLU 27 1.221 35.923 19.273 1.00 3.85 ATOM 368 O GLU 27 1.819 36.141 20.326 1.00 3.85 ATOM 369 CB GLU 27 1.181 33.602 18.360 1.00 3.85 ATOM 370 CG GLU 27 0.629 32.187 18.458 1.00 3.85 ATOM 371 CD GLU 27 0.742 31.609 19.840 1.00 3.85 ATOM 372 OE1 GLU 27 1.821 31.624 20.383 1.00 3.85 ATOM 373 OE2 GLU 27 -0.251 31.152 20.356 1.00 3.85 ATOM 380 N LEU 28 1.164 36.819 18.277 1.00 4.41 ATOM 381 CA LEU 28 1.828 38.125 18.344 1.00 4.41 ATOM 382 C LEU 28 1.051 39.137 19.212 1.00 4.41 ATOM 383 O LEU 28 1.517 40.253 19.446 1.00 4.41 ATOM 384 CB LEU 28 2.002 38.689 16.929 1.00 4.41 ATOM 385 CG LEU 28 2.587 40.105 16.845 1.00 4.41 ATOM 386 CD1 LEU 28 3.918 40.149 17.584 1.00 4.41 ATOM 387 CD2 LEU 28 2.758 40.497 15.385 1.00 4.41 ATOM 399 N ARG 29 -0.157 38.766 19.664 1.00 4.72 ATOM 400 CA ARG 29 -1.057 39.611 20.446 1.00 4.72 ATOM 401 C ARG 29 -1.450 40.889 19.698 1.00 4.72 ATOM 402 O ARG 29 -1.586 41.962 20.291 1.00 4.72 ATOM 403 CB ARG 29 -0.406 39.987 21.769 1.00 4.72 ATOM 404 CG ARG 29 -0.628 38.992 22.896 1.00 4.72 ATOM 405 CD ARG 29 0.160 37.749 22.696 1.00 4.72 ATOM 406 NE ARG 29 0.060 36.853 23.837 1.00 4.72 ATOM 407 CZ ARG 29 0.590 35.615 23.887 1.00 4.72 ATOM 408 NH1 ARG 29 1.252 35.142 22.855 1.00 4.72 ATOM 409 NH2 ARG 29 0.445 34.878 24.974 1.00 4.72 ATOM 423 N VAL 30 -1.784 40.738 18.408 1.00 4.89 ATOM 424 CA VAL 30 -2.306 41.922 17.712 1.00 4.89 ATOM 425 C VAL 30 -3.727 41.583 17.216 1.00 4.89 ATOM 426 O VAL 30 -4.113 40.416 17.119 1.00 4.89 ATOM 427 CB VAL 30 -1.404 42.312 16.526 1.00 4.89 ATOM 428 CG1 VAL 30 -0.066 42.838 17.024 1.00 4.89 ATOM 429 CG2 VAL 30 -1.207 41.115 15.609 1.00 4.89 ATOM 439 N THR 31 -4.560 42.581 16.917 1.00 5.19 ATOM 440 CA THR 31 -5.949 42.302 16.510 1.00 5.19 ATOM 441 C THR 31 -6.007 41.152 15.491 1.00 5.19 ATOM 442 O THR 31 -5.305 41.205 14.485 1.00 5.19 ATOM 443 CB THR 31 -6.616 43.555 15.912 1.00 5.19 ATOM 444 OG1 THR 31 -6.614 44.609 16.883 1.00 5.19 ATOM 445 CG2 THR 31 -8.048 43.251 15.501 1.00 5.19 ATOM 453 N GLU 32 -6.912 40.192 15.717 1.00 4.72 ATOM 454 CA GLU 32 -7.225 38.925 15.014 1.00 4.72 ATOM 455 C GLU 32 -7.599 39.058 13.508 1.00 4.72 ATOM 456 O GLU 32 -8.668 38.639 13.055 1.00 4.72 ATOM 457 CB GLU 32 -8.368 38.219 15.747 1.00 4.72 ATOM 458 CG GLU 32 -9.685 38.981 15.738 1.00 4.72 ATOM 459 CD GLU 32 -9.787 39.986 16.852 1.00 4.72 ATOM 460 OE1 GLU 32 -8.794 40.236 17.493 1.00 4.72 ATOM 461 OE2 GLU 32 -10.859 40.502 17.064 1.00 4.72 ATOM 468 N ARG 33 -6.773 39.729 12.708 1.00 4.28 ATOM 469 CA ARG 33 -6.911 39.973 11.275 1.00 4.28 ATOM 470 C ARG 33 -5.547 39.666 10.615 1.00 4.28 ATOM 471 O ARG 33 -4.495 40.208 11.000 1.00 4.28 ATOM 472 CB ARG 33 -7.328 41.410 10.995 1.00 4.28 ATOM 473 CG ARG 33 -8.718 41.779 11.489 1.00 4.28 ATOM 474 CD ARG 33 -9.779 41.117 10.689 1.00 4.28 ATOM 475 NE ARG 33 -11.110 41.531 11.103 1.00 4.28 ATOM 476 CZ ARG 33 -11.834 40.927 12.065 1.00 4.28 ATOM 477 NH1 ARG 33 -11.344 39.886 12.701 1.00 4.28 ATOM 478 NH2 ARG 33 -13.037 41.381 12.370 1.00 4.28 ATOM 492 N PRO 34 -5.533 38.807 9.581 1.00 3.31 ATOM 493 CA PRO 34 -4.321 38.579 8.798 1.00 3.31 ATOM 494 C PRO 34 -3.633 39.891 8.380 1.00 3.31 ATOM 495 O PRO 34 -2.409 39.942 8.333 1.00 3.31 ATOM 496 CB PRO 34 -4.850 37.811 7.583 1.00 3.31 ATOM 497 CG PRO 34 -6.026 37.062 8.109 1.00 3.31 ATOM 498 CD PRO 34 -6.685 38.021 9.064 1.00 3.31 ATOM 506 N PHE 35 -4.390 40.976 8.153 1.00 2.78 ATOM 507 CA PHE 35 -3.856 42.310 7.855 1.00 2.78 ATOM 508 C PHE 35 -2.575 42.666 8.649 1.00 2.78 ATOM 509 O PHE 35 -1.542 42.997 8.064 1.00 2.78 ATOM 510 CB PHE 35 -4.931 43.362 8.136 1.00 2.78 ATOM 511 CG PHE 35 -4.415 44.772 8.132 1.00 2.78 ATOM 512 CD1 PHE 35 -4.261 45.466 6.940 1.00 2.78 ATOM 513 CD2 PHE 35 -4.081 45.408 9.318 1.00 2.78 ATOM 514 CE1 PHE 35 -3.785 46.764 6.935 1.00 2.78 ATOM 515 CE2 PHE 35 -3.606 46.706 9.316 1.00 2.78 ATOM 516 CZ PHE 35 -3.458 47.383 8.122 1.00 2.78 ATOM 526 N TRP 36 -2.595 42.541 9.982 1.00 2.51 ATOM 527 CA TRP 36 -1.469 42.909 10.847 1.00 2.51 ATOM 528 C TRP 36 -0.260 42.010 10.599 1.00 2.51 ATOM 529 O TRP 36 0.863 42.519 10.485 1.00 2.51 ATOM 530 CB TRP 36 -1.875 42.825 12.319 1.00 2.51 ATOM 531 CG TRP 36 -2.612 44.035 12.808 1.00 2.51 ATOM 532 CD1 TRP 36 -3.911 44.090 13.215 1.00 2.51 ATOM 533 CD2 TRP 36 -2.091 45.380 12.946 1.00 2.51 ATOM 534 NE1 TRP 36 -4.234 45.370 13.592 1.00 2.51 ATOM 535 CE2 TRP 36 -3.132 46.171 13.436 1.00 2.51 ATOM 536 CE3 TRP 36 -0.843 45.965 12.695 1.00 2.51 ATOM 537 CZ2 TRP 36 -2.971 47.526 13.683 1.00 2.51 ATOM 538 CZ3 TRP 36 -0.681 47.322 12.944 1.00 2.51 ATOM 539 CH2 TRP 36 -1.718 48.081 13.426 1.00 2.51 ATOM 550 N ILE 37 -0.470 40.694 10.425 1.00 2.36 ATOM 551 CA ILE 37 0.712 39.843 10.129 1.00 2.36 ATOM 552 C ILE 37 1.326 40.167 8.754 1.00 2.36 ATOM 553 O ILE 37 2.545 40.233 8.625 1.00 2.36 ATOM 554 CB ILE 37 0.337 38.349 10.174 1.00 2.36 ATOM 555 CG1 ILE 37 -0.167 37.968 11.568 1.00 2.36 ATOM 556 CG2 ILE 37 1.529 37.489 9.781 1.00 2.36 ATOM 557 CD1 ILE 37 0.823 38.250 12.674 1.00 2.36 ATOM 569 N SER 38 0.501 40.468 7.750 1.00 2.65 ATOM 570 CA SER 38 0.913 40.928 6.411 1.00 2.65 ATOM 571 C SER 38 1.409 42.389 6.363 1.00 2.65 ATOM 572 O SER 38 2.004 42.839 5.377 1.00 2.65 ATOM 573 CB SER 38 -0.248 40.766 5.449 1.00 2.65 ATOM 574 OG SER 38 -1.254 41.705 5.713 1.00 2.65 ATOM 580 N SER 39 1.130 43.180 7.399 1.00 2.72 ATOM 581 CA SER 39 1.643 44.541 7.555 1.00 2.72 ATOM 582 C SER 39 3.010 44.532 8.258 1.00 2.72 ATOM 583 O SER 39 3.861 45.399 8.016 1.00 2.72 ATOM 584 CB SER 39 0.658 45.383 8.344 1.00 2.72 ATOM 585 OG SER 39 -0.563 45.493 7.667 1.00 2.72 ATOM 591 N PHE 40 3.243 43.535 9.120 1.00 2.89 ATOM 592 CA PHE 40 4.574 43.329 9.703 1.00 2.89 ATOM 593 C PHE 40 5.508 42.570 8.730 1.00 2.89 ATOM 594 O PHE 40 6.577 43.063 8.342 1.00 2.89 ATOM 595 CB PHE 40 4.461 42.559 11.020 1.00 2.89 ATOM 596 CG PHE 40 3.750 43.317 12.105 1.00 2.89 ATOM 597 CD1 PHE 40 2.592 42.814 12.678 1.00 2.89 ATOM 598 CD2 PHE 40 4.239 44.535 12.556 1.00 2.89 ATOM 599 CE1 PHE 40 1.937 43.509 13.677 1.00 2.89 ATOM 600 CE2 PHE 40 3.587 45.232 13.555 1.00 2.89 ATOM 601 CZ PHE 40 2.435 44.719 14.115 1.00 2.89 ATOM 611 N ILE 41 5.047 41.448 8.182 1.00 3.04 ATOM 612 CA ILE 41 5.892 40.727 7.238 1.00 3.04 ATOM 613 C ILE 41 5.660 41.327 5.847 1.00 3.04 ATOM 614 O ILE 41 4.537 41.438 5.362 1.00 3.04 ATOM 615 CB ILE 41 5.582 39.218 7.231 1.00 3.04 ATOM 616 CG1 ILE 41 5.444 38.696 8.664 1.00 3.04 ATOM 617 CG2 ILE 41 6.666 38.456 6.486 1.00 3.04 ATOM 618 CD1 ILE 41 6.711 38.812 9.481 1.00 3.04 ATOM 630 N GLY 42 6.736 41.781 5.232 1.00 3.40 ATOM 631 CA GLY 42 6.730 42.693 4.114 1.00 3.40 ATOM 632 C GLY 42 7.064 44.129 4.495 1.00 3.40 ATOM 633 O GLY 42 7.184 44.919 3.561 1.00 3.40 ATOM 637 N ARG 43 7.253 44.493 5.785 1.00 3.63 ATOM 638 CA ARG 43 7.619 45.887 6.125 1.00 3.63 ATOM 639 C ARG 43 8.924 45.963 6.925 1.00 3.63 ATOM 640 O ARG 43 8.890 46.358 8.078 1.00 3.63 ATOM 641 CB ARG 43 6.510 46.549 6.929 1.00 3.63 ATOM 642 CG ARG 43 6.701 48.037 7.179 1.00 3.63 ATOM 643 CD ARG 43 5.594 48.604 7.992 1.00 3.63 ATOM 644 NE ARG 43 4.298 48.384 7.371 1.00 3.63 ATOM 645 CZ ARG 43 3.707 49.236 6.510 1.00 3.63 ATOM 646 NH1 ARG 43 4.309 50.357 6.179 1.00 3.63 ATOM 647 NH2 ARG 43 2.524 48.946 5.999 1.00 3.63 ATOM 661 N SER 44 10.052 45.648 6.276 1.00 3.83 ATOM 662 CA SER 44 11.435 45.456 6.783 1.00 3.83 ATOM 663 C SER 44 12.083 46.712 7.446 1.00 3.83 ATOM 664 O SER 44 13.087 47.212 6.945 1.00 3.83 ATOM 665 CB SER 44 12.316 44.994 5.637 1.00 3.83 ATOM 666 OG SER 44 12.432 45.991 4.659 1.00 3.83 ATOM 672 N LYS 45 11.469 47.295 8.490 1.00 3.69 ATOM 673 CA LYS 45 11.822 48.605 9.106 1.00 3.69 ATOM 674 C LYS 45 13.209 48.755 9.746 1.00 3.69 ATOM 675 O LYS 45 13.935 49.702 9.454 1.00 3.69 ATOM 676 CB LYS 45 10.774 48.951 10.166 1.00 3.69 ATOM 677 CG LYS 45 10.980 50.302 10.838 1.00 3.69 ATOM 678 CD LYS 45 9.890 50.581 11.862 1.00 3.69 ATOM 679 CE LYS 45 10.042 51.969 12.469 1.00 3.69 ATOM 680 NZ LYS 45 11.330 52.120 13.199 1.00 3.69 TER END