####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS381_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS381_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 18 - 36 4.87 17.65 LCS_AVERAGE: 38.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.74 21.42 LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.87 15.08 LCS_AVERAGE: 18.39 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.46 16.30 LCS_AVERAGE: 13.12 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 13 3 3 3 3 3 3 4 4 4 4 7 9 9 12 12 13 17 18 19 19 LCS_GDT V 3 V 3 5 8 13 3 4 5 7 7 8 8 8 8 8 8 10 12 12 12 14 17 18 19 19 LCS_GDT Q 4 Q 4 5 8 16 3 4 5 7 7 8 8 8 8 9 11 11 12 14 17 17 18 21 25 27 LCS_GDT G 5 G 5 5 8 17 0 4 5 7 7 8 8 8 8 9 12 14 16 19 20 22 24 27 28 29 LCS_GDT P 6 P 6 5 8 17 2 4 5 7 7 8 8 10 11 12 13 14 16 20 24 24 25 27 29 31 LCS_GDT W 7 W 7 5 8 17 3 4 5 7 7 8 9 10 11 12 13 14 18 21 24 24 26 27 29 31 LCS_GDT V 8 V 8 5 10 17 3 3 5 7 7 9 10 10 11 12 13 14 14 19 20 22 24 27 28 29 LCS_GDT G 9 G 9 7 10 17 3 3 6 8 9 9 10 10 10 11 13 13 16 20 24 24 26 27 29 31 LCS_GDT S 10 S 10 8 10 17 6 7 8 8 9 9 10 10 12 13 15 16 18 21 24 24 26 27 29 31 LCS_GDT S 11 S 11 8 10 17 6 7 8 8 9 9 10 10 11 13 14 16 18 21 24 24 26 27 29 31 LCS_GDT Y 12 Y 12 8 10 17 6 7 8 8 9 9 10 10 11 12 13 14 18 21 24 24 26 27 29 31 LCS_GDT V 13 V 13 8 10 17 6 7 8 8 9 9 10 10 12 13 15 16 18 21 24 24 26 27 29 31 LCS_GDT A 14 A 14 8 10 17 6 7 8 8 9 9 10 10 12 13 15 16 18 21 24 24 26 27 29 31 LCS_GDT E 15 E 15 8 10 17 6 7 8 8 9 9 10 10 11 12 13 14 18 21 24 24 26 27 29 31 LCS_GDT T 16 T 16 8 10 17 4 7 8 8 9 9 10 10 11 13 15 16 18 21 24 24 26 27 29 31 LCS_GDT G 17 G 17 8 10 17 4 5 8 8 9 9 10 11 12 14 16 16 18 21 24 24 26 27 29 31 LCS_GDT Q 18 Q 18 4 4 19 3 3 4 5 5 6 9 11 12 14 16 17 18 21 24 24 26 27 29 31 LCS_GDT N 19 N 19 4 10 19 3 3 4 5 7 10 11 12 14 15 18 18 19 21 24 24 26 27 29 31 LCS_GDT W 20 W 20 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 20 21 24 26 27 29 31 LCS_GDT A 21 A 21 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT S 22 S 22 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT L 23 L 23 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT A 24 A 24 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT A 25 A 25 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT N 26 N 26 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT E 27 E 27 9 10 19 8 9 9 9 9 10 11 12 14 16 18 18 19 20 22 24 26 27 29 31 LCS_GDT L 28 L 28 9 10 19 4 9 9 9 9 10 11 12 14 16 18 18 19 20 21 22 24 27 29 31 LCS_GDT R 29 R 29 3 7 19 3 4 4 5 7 9 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT V 30 V 30 4 7 19 2 4 4 5 7 9 11 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT T 31 T 31 4 7 19 3 4 4 5 7 9 10 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT E 32 E 32 4 7 19 3 4 4 6 7 9 10 12 14 16 18 18 19 21 24 24 26 27 29 31 LCS_GDT R 33 R 33 4 7 19 3 4 4 6 7 9 10 12 14 16 18 18 19 19 21 22 25 27 28 29 LCS_GDT P 34 P 34 4 7 19 3 4 5 6 7 9 10 12 14 16 18 18 19 19 21 22 24 25 26 29 LCS_GDT F 35 F 35 4 7 19 3 4 5 5 7 8 10 12 14 16 18 18 19 20 24 24 26 27 29 31 LCS_GDT W 36 W 36 4 7 19 3 4 5 6 7 8 8 9 10 10 12 15 17 19 21 24 26 27 29 31 LCS_GDT I 37 I 37 4 7 14 3 4 5 6 7 10 10 11 13 14 16 17 18 20 21 24 26 27 29 31 LCS_GDT S 38 S 38 4 7 14 1 4 5 6 7 8 8 11 12 14 16 17 18 20 21 22 24 26 26 27 LCS_GDT S 39 S 39 4 6 14 1 3 4 5 6 10 10 11 13 14 16 17 18 20 21 22 24 26 26 28 LCS_GDT F 40 F 40 4 6 14 3 3 4 5 7 8 8 9 11 12 14 17 18 20 21 22 23 26 26 27 LCS_GDT I 41 I 41 4 6 14 3 3 4 5 6 7 8 10 12 13 15 17 18 20 21 22 23 25 25 27 LCS_GDT G 42 G 42 4 6 14 3 3 4 5 6 7 7 10 12 16 18 18 19 20 21 22 23 26 26 27 LCS_GDT R 43 R 43 3 6 14 3 3 4 4 7 9 11 12 14 16 18 18 19 20 21 22 24 26 28 31 LCS_GDT S 44 S 44 3 6 14 3 3 4 5 7 10 10 11 14 14 16 17 18 20 21 22 24 26 29 31 LCS_GDT K 45 K 45 0 3 13 0 0 3 3 3 3 4 9 11 12 14 15 15 18 19 22 24 25 26 27 LCS_AVERAGE LCS_A: 23.40 ( 13.12 18.39 38.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 9 9 9 10 11 12 14 16 18 18 19 21 24 24 26 27 29 31 GDT PERCENT_AT 18.18 20.45 20.45 20.45 20.45 22.73 25.00 27.27 31.82 36.36 40.91 40.91 43.18 47.73 54.55 54.55 59.09 61.36 65.91 70.45 GDT RMS_LOCAL 0.31 0.46 0.46 0.46 0.46 1.23 2.24 2.63 3.02 3.59 3.85 3.85 4.05 5.59 5.97 5.97 6.29 6.40 6.74 7.11 GDT RMS_ALL_AT 16.59 16.30 16.30 16.30 16.30 16.77 14.70 14.33 13.76 19.52 19.18 19.18 18.63 10.81 11.04 11.04 10.70 10.90 10.77 10.74 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 36.212 0 0.068 0.091 37.745 0.000 0.000 - LGA V 3 V 3 32.867 0 0.619 0.836 33.797 0.000 0.000 31.114 LGA Q 4 Q 4 29.411 0 0.644 0.819 31.753 0.000 0.000 30.032 LGA G 5 G 5 24.851 0 0.244 0.244 26.576 0.000 0.000 - LGA P 6 P 6 19.850 0 0.054 0.182 21.616 0.000 0.000 17.776 LGA W 7 W 7 18.037 0 0.393 1.171 21.645 0.000 0.000 11.284 LGA V 8 V 8 21.306 0 0.036 0.319 23.556 0.000 0.000 23.556 LGA G 9 G 9 17.207 0 0.466 0.466 18.010 0.000 0.000 - LGA S 10 S 10 16.715 0 0.128 0.558 18.055 0.000 0.000 18.055 LGA S 11 S 11 19.876 0 0.050 0.677 23.316 0.000 0.000 23.316 LGA Y 12 Y 12 16.672 0 0.086 1.210 17.622 0.000 0.000 17.622 LGA V 13 V 13 13.051 0 0.072 1.016 14.112 0.000 0.000 13.389 LGA A 14 A 14 17.312 0 0.046 0.055 19.384 0.000 0.000 - LGA E 15 E 15 18.038 0 0.064 1.390 25.151 0.000 0.000 25.151 LGA T 16 T 16 13.431 0 0.130 0.919 14.718 0.000 0.000 13.023 LGA G 17 G 17 12.639 0 0.203 0.203 12.674 0.000 0.000 - LGA Q 18 Q 18 9.104 0 0.632 1.402 13.181 0.000 0.000 12.712 LGA N 19 N 19 3.115 0 0.074 1.044 5.158 27.727 26.591 3.482 LGA W 20 W 20 3.313 0 0.623 1.119 12.212 33.636 9.610 11.668 LGA A 21 A 21 0.762 0 0.036 0.034 1.247 73.636 72.000 - LGA S 22 S 22 2.451 0 0.026 0.635 3.548 45.000 40.303 1.759 LGA L 23 L 23 2.588 0 0.033 1.174 8.458 45.455 24.091 5.576 LGA A 24 A 24 1.720 0 0.030 0.038 2.377 51.364 48.727 - LGA A 25 A 25 2.397 0 0.031 0.033 3.112 40.000 37.455 - LGA N 26 N 26 2.057 0 0.025 0.920 5.550 47.727 29.318 5.550 LGA E 27 E 27 1.120 0 0.036 0.947 4.435 55.000 44.646 4.435 LGA L 28 L 28 2.962 0 0.456 1.165 9.270 53.182 26.591 9.270 LGA R 29 R 29 4.681 0 0.602 1.388 8.887 7.727 2.810 8.127 LGA V 30 V 30 5.192 0 0.194 0.358 8.530 0.000 1.558 5.046 LGA T 31 T 31 11.070 0 0.646 0.503 13.244 0.000 0.000 11.598 LGA E 32 E 32 13.700 0 0.610 1.102 14.775 0.000 0.000 13.924 LGA R 33 R 33 16.084 0 0.163 1.276 17.983 0.000 0.000 16.657 LGA P 34 P 34 13.458 0 0.374 0.390 17.707 0.000 0.000 16.524 LGA F 35 F 35 8.513 0 0.140 1.314 10.361 0.000 0.000 10.158 LGA W 36 W 36 6.347 0 0.192 1.079 12.291 3.182 0.909 12.291 LGA I 37 I 37 6.160 0 0.632 0.533 9.730 0.000 0.000 9.730 LGA S 38 S 38 10.572 0 0.619 0.864 11.994 0.000 0.000 11.875 LGA S 39 S 39 8.196 0 0.551 0.460 9.416 0.000 0.000 9.416 LGA F 40 F 40 9.174 0 0.598 1.232 17.483 0.000 0.000 17.008 LGA I 41 I 41 9.681 0 0.114 1.071 15.797 0.000 0.000 15.797 LGA G 42 G 42 6.403 0 0.539 0.539 7.150 7.273 7.273 - LGA R 43 R 43 2.016 0 0.570 1.155 12.596 38.636 14.545 10.655 LGA S 44 S 44 5.753 0 0.636 0.550 8.462 4.545 3.030 7.209 LGA K 45 K 45 9.237 0 0.631 0.659 14.573 0.000 0.000 14.573 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.647 10.605 11.382 12.138 8.851 2.130 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.63 30.682 27.294 0.440 LGA_LOCAL RMSD: 2.628 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.335 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.647 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.007252 * X + -0.648378 * Y + 0.761284 * Z + 8.451097 Y_new = 0.015705 * X + -0.761284 * Y + -0.648229 * Z + 50.513050 Z_new = 0.999850 * X + 0.007255 * Y + 0.015704 * Z + 26.419687 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.003408 -1.553498 0.432767 [DEG: 114.7868 -89.0089 24.7957 ] ZXZ: 0.865436 1.555092 1.563541 [DEG: 49.5858 89.1002 89.5843 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS381_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS381_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.63 27.294 10.65 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS381_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 -8.457 28.459 -17.564 1.00 0.00 N ATOM 14 CA ALA 2 -8.055 29.748 -16.975 1.00 0.00 C ATOM 15 CB ALA 2 -6.645 30.121 -17.429 1.00 0.00 C ATOM 16 C ALA 2 -9.042 30.866 -17.342 1.00 0.00 C ATOM 17 O ALA 2 -9.522 30.920 -18.482 1.00 0.00 O ATOM 18 N VAL 3 -9.340 31.738 -16.368 1.00 0.00 N ATOM 20 CA VAL 3 -10.268 32.879 -16.527 1.00 0.00 C ATOM 21 CB VAL 3 -11.327 32.963 -15.353 1.00 0.00 C ATOM 22 CG1 VAL 3 -12.396 31.899 -15.544 1.00 0.00 C ATOM 23 CG2 VAL 3 -10.664 32.793 -13.966 1.00 0.00 C ATOM 24 C VAL 3 -9.559 34.238 -16.726 1.00 0.00 C ATOM 25 O VAL 3 -9.978 35.035 -17.576 1.00 0.00 O ATOM 26 N GLN 4 -8.491 34.475 -15.949 1.00 0.00 N ATOM 28 CA GLN 4 -7.691 35.715 -15.997 1.00 0.00 C ATOM 29 CB GLN 4 -7.614 36.374 -14.610 1.00 0.00 C ATOM 30 CG GLN 4 -8.930 36.954 -14.103 1.00 0.00 C ATOM 31 CD GLN 4 -8.797 37.591 -12.733 1.00 0.00 C ATOM 32 OE1 GLN 4 -8.990 36.933 -11.710 1.00 0.00 O ATOM 33 NE2 GLN 4 -8.468 38.877 -12.706 1.00 0.00 N ATOM 36 C GLN 4 -6.275 35.456 -16.526 1.00 0.00 C ATOM 37 O GLN 4 -5.732 36.280 -17.270 1.00 0.00 O ATOM 38 N GLY 5 -5.697 34.316 -16.136 1.00 0.00 N ATOM 40 CA GLY 5 -4.354 33.945 -16.562 1.00 0.00 C ATOM 41 C GLY 5 -3.799 32.756 -15.781 1.00 0.00 C ATOM 42 O GLY 5 -4.494 31.735 -15.717 1.00 0.00 O ATOM 43 N PRO 6 -2.575 32.835 -15.176 1.00 0.00 N ATOM 44 CD PRO 6 -1.583 33.925 -15.333 1.00 0.00 C ATOM 45 CA PRO 6 -1.982 31.723 -14.404 1.00 0.00 C ATOM 46 CB PRO 6 -0.561 32.227 -14.103 1.00 0.00 C ATOM 47 CG PRO 6 -0.683 33.729 -14.150 1.00 0.00 C ATOM 48 C PRO 6 -2.734 31.270 -13.122 1.00 0.00 C ATOM 49 O PRO 6 -2.467 30.179 -12.599 1.00 0.00 O ATOM 50 N TRP 7 -3.673 32.107 -12.657 1.00 0.00 N ATOM 52 CA TRP 7 -4.490 31.844 -11.457 1.00 0.00 C ATOM 53 CB TRP 7 -4.603 33.114 -10.582 1.00 0.00 C ATOM 54 CG TRP 7 -3.276 33.692 -10.032 1.00 0.00 C ATOM 55 CD2 TRP 7 -2.504 34.787 -10.574 1.00 0.00 C ATOM 56 CE2 TRP 7 -1.392 34.983 -9.707 1.00 0.00 C ATOM 57 CE3 TRP 7 -2.642 35.622 -11.707 1.00 0.00 C ATOM 58 CD1 TRP 7 -2.610 33.292 -8.893 1.00 0.00 C ATOM 59 NE1 TRP 7 -1.488 34.060 -8.700 1.00 0.00 N ATOM 61 CZ2 TRP 7 -0.416 35.984 -9.934 1.00 0.00 C ATOM 62 CZ3 TRP 7 -1.666 36.625 -11.936 1.00 0.00 C ATOM 63 CH2 TRP 7 -0.567 36.791 -11.047 1.00 0.00 C ATOM 64 C TRP 7 -5.897 31.341 -11.817 1.00 0.00 C ATOM 65 O TRP 7 -6.446 31.729 -12.856 1.00 0.00 O ATOM 66 N VAL 8 -6.458 30.480 -10.954 1.00 0.00 N ATOM 68 CA VAL 8 -7.802 29.885 -11.125 1.00 0.00 C ATOM 69 CB VAL 8 -7.783 28.309 -10.935 1.00 0.00 C ATOM 70 CG1 VAL 8 -9.044 27.661 -11.537 1.00 0.00 C ATOM 71 CG2 VAL 8 -6.536 27.696 -11.575 1.00 0.00 C ATOM 72 C VAL 8 -8.762 30.537 -10.105 1.00 0.00 C ATOM 73 O VAL 8 -9.950 30.725 -10.399 1.00 0.00 O ATOM 74 N GLY 9 -8.225 30.892 -8.932 1.00 0.00 N ATOM 76 CA GLY 9 -9.012 31.517 -7.878 1.00 0.00 C ATOM 77 C GLY 9 -8.185 31.834 -6.644 1.00 0.00 C ATOM 78 O GLY 9 -6.963 31.644 -6.654 1.00 0.00 O ATOM 79 N SER 10 -8.859 32.315 -5.591 1.00 0.00 N ATOM 81 CA SER 10 -8.235 32.682 -4.309 1.00 0.00 C ATOM 82 CB SER 10 -8.697 34.082 -3.872 1.00 0.00 C ATOM 83 OG SER 10 -8.339 35.059 -4.833 1.00 0.00 O ATOM 85 C SER 10 -8.545 31.652 -3.204 1.00 0.00 C ATOM 86 O SER 10 -8.080 31.801 -2.067 1.00 0.00 O ATOM 87 N SER 11 -9.256 30.576 -3.575 1.00 0.00 N ATOM 89 CA SER 11 -9.674 29.487 -2.664 1.00 0.00 C ATOM 90 OG SER 11 -9.966 27.988 -4.571 1.00 0.00 O ATOM 92 C SER 11 -8.543 28.720 -1.945 1.00 0.00 C ATOM 93 O SER 11 -8.628 28.503 -0.728 1.00 0.00 O ATOM 94 CB SER 11 -10.588 28.500 -3.403 1.00 0.00 C ATOM 95 N TYR 12 -7.491 28.346 -2.690 1.00 0.00 N ATOM 97 CA TYR 12 -6.323 27.609 -2.161 1.00 0.00 C ATOM 98 CB TYR 12 -5.450 27.070 -3.322 1.00 0.00 C ATOM 99 CG TYR 12 -6.110 26.056 -4.266 1.00 0.00 C ATOM 100 CD1 TYR 12 -6.028 24.663 -4.018 1.00 0.00 C ATOM 101 CE1 TYR 12 -6.609 23.719 -4.910 1.00 0.00 C ATOM 102 CD2 TYR 12 -6.790 26.481 -5.435 1.00 0.00 C ATOM 103 CE2 TYR 12 -7.373 25.542 -6.333 1.00 0.00 C ATOM 104 CZ TYR 12 -7.276 24.169 -6.061 1.00 0.00 C ATOM 105 OH TYR 12 -7.839 23.260 -6.927 1.00 0.00 O ATOM 107 C TYR 12 -5.465 28.456 -1.203 1.00 0.00 C ATOM 108 O TYR 12 -5.124 27.993 -0.105 1.00 0.00 O ATOM 109 N VAL 13 -5.160 29.699 -1.610 1.00 0.00 N ATOM 111 CA VAL 13 -4.368 30.657 -0.809 1.00 0.00 C ATOM 112 CB VAL 13 -3.793 31.853 -1.645 1.00 0.00 C ATOM 113 CG1 VAL 13 -2.605 31.382 -2.469 1.00 0.00 C ATOM 114 CG2 VAL 13 -4.857 32.471 -2.575 1.00 0.00 C ATOM 115 C VAL 13 -5.105 31.170 0.444 1.00 0.00 C ATOM 116 O VAL 13 -4.478 31.361 1.491 1.00 0.00 O ATOM 117 N ALA 14 -6.427 31.376 0.321 1.00 0.00 N ATOM 119 CA ALA 14 -7.290 31.847 1.425 1.00 0.00 C ATOM 120 CB ALA 14 -8.646 32.263 0.921 1.00 0.00 C ATOM 121 C ALA 14 -7.441 30.805 2.541 1.00 0.00 C ATOM 122 O ALA 14 -7.533 31.177 3.714 1.00 0.00 O ATOM 123 N GLU 15 -7.489 29.517 2.165 1.00 0.00 N ATOM 125 CA GLU 15 -7.608 28.385 3.110 1.00 0.00 C ATOM 126 CB GLU 15 -7.885 27.079 2.343 1.00 0.00 C ATOM 127 CG GLU 15 -8.801 26.080 3.061 1.00 0.00 C ATOM 128 CD GLU 15 -9.035 24.816 2.254 1.00 0.00 C ATOM 129 OE1 GLU 15 -10.004 24.782 1.465 1.00 0.00 O ATOM 130 OE2 GLU 15 -8.251 23.856 2.409 1.00 0.00 O ATOM 131 C GLU 15 -6.303 28.276 3.939 1.00 0.00 C ATOM 132 O GLU 15 -6.355 28.169 5.172 1.00 0.00 O ATOM 133 N THR 16 -5.154 28.354 3.248 1.00 0.00 N ATOM 135 CA THR 16 -3.806 28.304 3.855 1.00 0.00 C ATOM 136 CB THR 16 -2.696 28.135 2.765 1.00 0.00 C ATOM 137 OG1 THR 16 -3.218 27.376 1.667 1.00 0.00 O ATOM 139 CG2 THR 16 -1.480 27.381 3.326 1.00 0.00 C ATOM 140 C THR 16 -3.586 29.605 4.662 1.00 0.00 C ATOM 141 O THR 16 -2.984 29.584 5.741 1.00 0.00 O ATOM 142 N GLY 17 -4.114 30.712 4.121 1.00 0.00 N ATOM 144 CA GLY 17 -4.031 32.039 4.730 1.00 0.00 C ATOM 145 C GLY 17 -4.850 32.215 6.003 1.00 0.00 C ATOM 146 O GLY 17 -4.414 32.917 6.918 1.00 0.00 O ATOM 147 N GLN 18 -6.035 31.585 6.039 1.00 0.00 N ATOM 149 CA GLN 18 -6.970 31.615 7.182 1.00 0.00 C ATOM 150 CB GLN 18 -8.318 30.986 6.789 1.00 0.00 C ATOM 151 CG GLN 18 -9.554 31.654 7.399 1.00 0.00 C ATOM 152 CD GLN 18 -10.849 30.987 6.973 1.00 0.00 C ATOM 153 OE1 GLN 18 -11.459 31.373 5.977 1.00 0.00 O ATOM 154 NE2 GLN 18 -11.273 29.980 7.728 1.00 0.00 N ATOM 157 C GLN 18 -6.345 30.854 8.367 1.00 0.00 C ATOM 158 O GLN 18 -6.514 31.254 9.523 1.00 0.00 O ATOM 159 N ASN 19 -5.627 29.766 8.048 1.00 0.00 N ATOM 161 CA ASN 19 -4.917 28.911 9.020 1.00 0.00 C ATOM 162 CB ASN 19 -4.403 27.639 8.315 1.00 0.00 C ATOM 163 CG ASN 19 -4.214 26.458 9.271 1.00 0.00 C ATOM 164 OD1 ASN 19 -5.130 25.660 9.479 1.00 0.00 O ATOM 165 ND2 ASN 19 -3.017 26.340 9.840 1.00 0.00 N ATOM 168 C ASN 19 -3.741 29.728 9.606 1.00 0.00 C ATOM 169 O ASN 19 -3.511 29.715 10.822 1.00 0.00 O ATOM 170 N TRP 20 -3.043 30.454 8.718 1.00 0.00 N ATOM 172 CA TRP 20 -1.893 31.327 9.031 1.00 0.00 C ATOM 173 CB TRP 20 -1.167 31.724 7.724 1.00 0.00 C ATOM 174 CG TRP 20 0.248 31.121 7.533 1.00 0.00 C ATOM 175 CD2 TRP 20 0.591 29.788 7.085 1.00 0.00 C ATOM 176 CE2 TRP 20 2.013 29.717 7.039 1.00 0.00 C ATOM 177 CE3 TRP 20 -0.161 28.647 6.720 1.00 0.00 C ATOM 178 CD1 TRP 20 1.446 31.769 7.728 1.00 0.00 C ATOM 179 NE1 TRP 20 2.496 30.935 7.435 1.00 0.00 N ATOM 181 CZ2 TRP 20 2.705 28.547 6.640 1.00 0.00 C ATOM 182 CZ3 TRP 20 0.530 27.475 6.321 1.00 0.00 C ATOM 183 CH2 TRP 20 1.952 27.441 6.287 1.00 0.00 C ATOM 184 C TRP 20 -2.287 32.588 9.829 1.00 0.00 C ATOM 185 O TRP 20 -1.588 32.970 10.775 1.00 0.00 O ATOM 186 N ALA 21 -3.413 33.205 9.434 1.00 0.00 N ATOM 188 CA ALA 21 -3.990 34.420 10.047 1.00 0.00 C ATOM 189 CB ALA 21 -5.077 35.006 9.128 1.00 0.00 C ATOM 190 C ALA 21 -4.548 34.168 11.462 1.00 0.00 C ATOM 191 O ALA 21 -4.402 35.019 12.348 1.00 0.00 O ATOM 192 N SER 22 -5.174 32.997 11.652 1.00 0.00 N ATOM 194 CA SER 22 -5.762 32.553 12.935 1.00 0.00 C ATOM 195 CB SER 22 -6.655 31.326 12.718 1.00 0.00 C ATOM 196 OG SER 22 -7.753 31.636 11.879 1.00 0.00 O ATOM 198 C SER 22 -4.685 32.253 13.995 1.00 0.00 C ATOM 199 O SER 22 -4.836 32.646 15.158 1.00 0.00 O ATOM 200 N LEU 23 -3.600 31.584 13.568 1.00 0.00 N ATOM 202 CA LEU 23 -2.447 31.218 14.418 1.00 0.00 C ATOM 203 CB LEU 23 -1.520 30.237 13.661 1.00 0.00 C ATOM 204 CG LEU 23 -0.724 29.125 14.376 1.00 0.00 C ATOM 205 CD1 LEU 23 -1.297 27.740 14.049 1.00 0.00 C ATOM 206 CD2 LEU 23 0.740 29.193 13.952 1.00 0.00 C ATOM 207 C LEU 23 -1.684 32.501 14.817 1.00 0.00 C ATOM 208 O LEU 23 -1.234 32.631 15.964 1.00 0.00 O ATOM 209 N ALA 24 -1.585 33.437 13.861 1.00 0.00 N ATOM 211 CA ALA 24 -0.926 34.748 14.020 1.00 0.00 C ATOM 212 CB ALA 24 -0.770 35.429 12.672 1.00 0.00 C ATOM 213 C ALA 24 -1.713 35.653 14.975 1.00 0.00 C ATOM 214 O ALA 24 -1.117 36.434 15.715 1.00 0.00 O ATOM 215 N ALA 25 -3.050 35.543 14.921 1.00 0.00 N ATOM 217 CA ALA 25 -3.994 36.316 15.752 1.00 0.00 C ATOM 218 CB ALA 25 -5.407 36.169 15.209 1.00 0.00 C ATOM 219 C ALA 25 -3.949 35.961 17.248 1.00 0.00 C ATOM 220 O ALA 25 -3.933 36.869 18.088 1.00 0.00 O ATOM 221 N ASN 26 -3.933 34.656 17.571 1.00 0.00 N ATOM 223 CA ASN 26 -3.856 34.168 18.966 1.00 0.00 C ATOM 224 CB ASN 26 -4.238 32.671 19.095 1.00 0.00 C ATOM 225 CG ASN 26 -3.514 31.759 18.095 1.00 0.00 C ATOM 226 OD1 ASN 26 -4.146 31.176 17.216 1.00 0.00 O ATOM 227 ND2 ASN 26 -2.203 31.596 18.265 1.00 0.00 N ATOM 230 C ASN 26 -2.483 34.465 19.605 1.00 0.00 C ATOM 231 O ASN 26 -2.415 34.898 20.759 1.00 0.00 O ATOM 232 N GLU 27 -1.413 34.219 18.835 1.00 0.00 N ATOM 234 CA GLU 27 -0.003 34.468 19.215 1.00 0.00 C ATOM 235 CG GLU 27 0.992 32.276 18.295 1.00 0.00 C ATOM 236 CD GLU 27 1.958 31.662 17.297 1.00 0.00 C ATOM 237 OE1 GLU 27 3.141 31.473 17.651 1.00 0.00 O ATOM 238 OE2 GLU 27 1.533 31.367 16.160 1.00 0.00 O ATOM 239 C GLU 27 0.283 35.980 19.288 1.00 0.00 C ATOM 240 O GLU 27 1.098 36.434 20.099 1.00 0.00 O ATOM 241 CB GLU 27 0.958 33.801 18.222 1.00 0.00 C ATOM 242 N LEU 28 -0.405 36.728 18.406 1.00 0.00 N ATOM 244 CA LEU 28 -0.358 38.201 18.199 1.00 0.00 C ATOM 245 CB LEU 28 -0.921 39.046 19.395 1.00 0.00 C ATOM 246 CG LEU 28 -0.610 39.178 20.918 1.00 0.00 C ATOM 247 CD1 LEU 28 -1.193 38.020 21.734 1.00 0.00 C ATOM 248 CD2 LEU 28 0.879 39.399 21.232 1.00 0.00 C ATOM 249 C LEU 28 0.921 38.819 17.600 1.00 0.00 C ATOM 250 O LEU 28 1.949 38.952 18.279 1.00 0.00 O ATOM 251 N ARG 29 0.832 39.121 16.296 1.00 0.00 N ATOM 253 CA ARG 29 1.894 39.732 15.470 1.00 0.00 C ATOM 254 CB ARG 29 2.799 38.660 14.806 1.00 0.00 C ATOM 255 CG ARG 29 2.100 37.404 14.238 1.00 0.00 C ATOM 256 CD ARG 29 3.075 36.245 14.072 1.00 0.00 C ATOM 257 NE ARG 29 3.506 35.689 15.358 1.00 0.00 N ATOM 259 CZ ARG 29 4.288 34.621 15.509 1.00 0.00 C ATOM 260 NH1 ARG 29 4.608 34.215 16.730 1.00 0.00 N ATOM 263 NH2 ARG 29 4.757 33.955 14.458 1.00 0.00 N ATOM 266 C ARG 29 1.251 40.665 14.425 1.00 0.00 C ATOM 267 O ARG 29 0.046 40.551 14.181 1.00 0.00 O ATOM 268 N VAL 30 2.039 41.582 13.842 1.00 0.00 N ATOM 270 CA VAL 30 1.557 42.551 12.829 1.00 0.00 C ATOM 271 CB VAL 30 2.129 44.006 13.073 1.00 0.00 C ATOM 272 CG1 VAL 30 1.308 45.065 12.318 1.00 0.00 C ATOM 273 CG2 VAL 30 2.128 44.359 14.542 1.00 0.00 C ATOM 274 C VAL 30 1.861 42.060 11.388 1.00 0.00 C ATOM 275 O VAL 30 2.698 41.172 11.202 1.00 0.00 O ATOM 276 N THR 31 1.171 42.652 10.399 1.00 0.00 N ATOM 278 CA THR 31 1.290 42.313 8.967 1.00 0.00 C ATOM 279 CB THR 31 -0.074 42.473 8.234 1.00 0.00 C ATOM 280 OG1 THR 31 -0.660 43.737 8.574 1.00 0.00 O ATOM 282 CG2 THR 31 -1.026 41.350 8.600 1.00 0.00 C ATOM 283 C THR 31 2.371 43.039 8.134 1.00 0.00 C ATOM 284 O THR 31 2.590 44.249 8.284 1.00 0.00 O ATOM 285 N GLU 32 3.065 42.244 7.304 1.00 0.00 N ATOM 287 CA GLU 32 4.127 42.647 6.352 1.00 0.00 C ATOM 288 CB GLU 32 5.474 42.931 7.056 1.00 0.00 C ATOM 289 CG GLU 32 6.402 43.890 6.293 1.00 0.00 C ATOM 290 CD GLU 32 7.745 44.076 6.964 1.00 0.00 C ATOM 291 OE1 GLU 32 7.872 44.994 7.800 1.00 0.00 O ATOM 292 OE2 GLU 32 8.680 43.312 6.646 1.00 0.00 O ATOM 293 C GLU 32 4.251 41.405 5.447 1.00 0.00 C ATOM 294 O GLU 32 4.477 41.520 4.237 1.00 0.00 O ATOM 295 N ARG 33 4.096 40.233 6.081 1.00 0.00 N ATOM 297 CA ARG 33 4.135 38.894 5.466 1.00 0.00 C ATOM 298 CB ARG 33 5.363 38.082 5.963 1.00 0.00 C ATOM 299 CG ARG 33 5.866 38.362 7.393 1.00 0.00 C ATOM 300 CD ARG 33 7.120 37.559 7.703 1.00 0.00 C ATOM 301 NE ARG 33 7.614 37.806 9.059 1.00 0.00 N ATOM 303 CZ ARG 33 8.690 37.235 9.600 1.00 0.00 C ATOM 304 NH1 ARG 33 9.424 36.362 8.916 1.00 0.00 N ATOM 307 NH2 ARG 33 9.037 37.542 10.842 1.00 0.00 N ATOM 310 C ARG 33 2.785 38.204 5.827 1.00 0.00 C ATOM 311 O ARG 33 2.101 38.699 6.733 1.00 0.00 O ATOM 312 N PRO 34 2.367 37.092 5.132 1.00 0.00 N ATOM 313 CD PRO 34 2.928 36.476 3.905 1.00 0.00 C ATOM 314 CA PRO 34 1.085 36.422 5.455 1.00 0.00 C ATOM 315 CB PRO 34 1.066 35.242 4.479 1.00 0.00 C ATOM 316 CG PRO 34 1.723 35.805 3.289 1.00 0.00 C ATOM 317 C PRO 34 0.805 35.989 6.924 1.00 0.00 C ATOM 318 O PRO 34 1.008 34.824 7.300 1.00 0.00 O ATOM 319 N PHE 35 0.378 36.968 7.739 1.00 0.00 N ATOM 321 CA PHE 35 0.023 36.812 9.167 1.00 0.00 C ATOM 322 CB PHE 35 1.231 37.143 10.102 1.00 0.00 C ATOM 323 CG PHE 35 2.362 36.114 10.066 1.00 0.00 C ATOM 324 CD1 PHE 35 3.529 36.357 9.309 1.00 0.00 C ATOM 325 CD2 PHE 35 2.279 34.910 10.809 1.00 0.00 C ATOM 326 CE1 PHE 35 4.599 35.419 9.287 1.00 0.00 C ATOM 327 CE2 PHE 35 3.340 33.964 10.797 1.00 0.00 C ATOM 328 CZ PHE 35 4.504 34.220 10.033 1.00 0.00 C ATOM 329 C PHE 35 -1.163 37.745 9.481 1.00 0.00 C ATOM 330 O PHE 35 -1.782 38.280 8.554 1.00 0.00 O ATOM 331 N TRP 36 -1.482 37.910 10.774 1.00 0.00 N ATOM 333 CA TRP 36 -2.570 38.779 11.258 1.00 0.00 C ATOM 334 CB TRP 36 -3.380 38.059 12.364 1.00 0.00 C ATOM 335 CG TRP 36 -4.752 38.687 12.756 1.00 0.00 C ATOM 336 CD2 TRP 36 -6.027 38.505 12.099 1.00 0.00 C ATOM 337 CE2 TRP 36 -6.989 39.248 12.842 1.00 0.00 C ATOM 338 CE3 TRP 36 -6.454 37.787 10.957 1.00 0.00 C ATOM 339 CD1 TRP 36 -4.999 39.508 13.831 1.00 0.00 C ATOM 340 NE1 TRP 36 -6.330 39.844 13.884 1.00 0.00 N ATOM 342 CZ2 TRP 36 -8.358 39.299 12.482 1.00 0.00 C ATOM 343 CZ3 TRP 36 -7.824 37.836 10.595 1.00 0.00 C ATOM 344 CH2 TRP 36 -8.756 38.590 11.362 1.00 0.00 C ATOM 345 C TRP 36 -1.931 40.081 11.786 1.00 0.00 C ATOM 346 O TRP 36 -0.702 40.220 11.741 1.00 0.00 O ATOM 347 N ILE 37 -2.764 41.030 12.236 1.00 0.00 N ATOM 349 CA ILE 37 -2.309 42.332 12.754 1.00 0.00 C ATOM 350 CB ILE 37 -2.906 43.524 11.893 1.00 0.00 C ATOM 351 CG2 ILE 37 -4.464 43.493 11.892 1.00 0.00 C ATOM 352 CG1 ILE 37 -2.334 44.892 12.323 1.00 0.00 C ATOM 353 CD1 ILE 37 -2.095 45.885 11.179 1.00 0.00 C ATOM 354 C ILE 37 -2.490 42.517 14.283 1.00 0.00 C ATOM 355 O ILE 37 -3.514 42.118 14.852 1.00 0.00 O ATOM 356 N SER 38 -1.464 43.117 14.907 1.00 0.00 N ATOM 358 CA SER 38 -1.390 43.418 16.350 1.00 0.00 C ATOM 359 CB SER 38 -0.602 42.315 17.078 1.00 0.00 C ATOM 360 OG SER 38 -1.204 41.053 16.863 1.00 0.00 O ATOM 362 C SER 38 -0.700 44.794 16.493 1.00 0.00 C ATOM 363 O SER 38 -0.831 45.626 15.586 1.00 0.00 O ATOM 364 N SER 39 0.017 45.038 17.605 1.00 0.00 N ATOM 366 CA SER 39 0.728 46.311 17.849 1.00 0.00 C ATOM 367 CB SER 39 -0.046 47.192 18.847 1.00 0.00 C ATOM 368 OG SER 39 -0.290 46.505 20.063 1.00 0.00 O ATOM 370 C SER 39 2.201 46.167 18.291 1.00 0.00 C ATOM 371 O SER 39 2.481 45.790 19.438 1.00 0.00 O ATOM 372 N PHE 40 3.120 46.485 17.360 1.00 0.00 N ATOM 374 CA PHE 40 4.608 46.473 17.488 1.00 0.00 C ATOM 375 CB PHE 40 5.143 47.929 17.672 1.00 0.00 C ATOM 376 CG PHE 40 4.575 48.681 18.886 1.00 0.00 C ATOM 377 CD1 PHE 40 5.219 48.617 20.145 1.00 0.00 C ATOM 378 CD2 PHE 40 3.411 49.477 18.768 1.00 0.00 C ATOM 379 CE1 PHE 40 4.716 49.329 21.268 1.00 0.00 C ATOM 380 CE2 PHE 40 2.895 50.196 19.883 1.00 0.00 C ATOM 381 CZ PHE 40 3.549 50.120 21.137 1.00 0.00 C ATOM 382 C PHE 40 5.375 45.493 18.422 1.00 0.00 C ATOM 383 O PHE 40 4.878 45.116 19.486 1.00 0.00 O ATOM 384 N ILE 41 6.602 45.128 18.000 1.00 0.00 N ATOM 386 CA ILE 41 7.579 44.209 18.660 1.00 0.00 C ATOM 387 CB ILE 41 8.363 44.904 19.887 1.00 0.00 C ATOM 388 CG2 ILE 41 7.493 44.960 21.177 1.00 0.00 C ATOM 389 CG1 ILE 41 9.730 44.231 20.127 1.00 0.00 C ATOM 390 CD1 ILE 41 10.868 45.188 20.509 1.00 0.00 C ATOM 391 C ILE 41 7.157 42.728 18.911 1.00 0.00 C ATOM 392 O ILE 41 6.259 42.448 19.715 1.00 0.00 O ATOM 393 N GLY 42 7.828 41.818 18.192 1.00 0.00 N ATOM 395 CA GLY 42 7.580 40.380 18.278 1.00 0.00 C ATOM 396 C GLY 42 8.420 39.621 17.259 1.00 0.00 C ATOM 397 O GLY 42 9.651 39.602 17.379 1.00 0.00 O ATOM 398 N ARG 43 7.761 38.989 16.275 1.00 0.00 N ATOM 400 CA ARG 43 8.423 38.232 15.191 1.00 0.00 C ATOM 401 CB ARG 43 8.014 36.747 15.195 1.00 0.00 C ATOM 402 CG ARG 43 8.607 35.942 16.356 1.00 0.00 C ATOM 403 CD ARG 43 8.675 34.443 16.064 1.00 0.00 C ATOM 404 NE ARG 43 7.367 33.783 16.077 1.00 0.00 N ATOM 406 CZ ARG 43 7.166 32.480 15.872 1.00 0.00 C ATOM 407 NH1 ARG 43 8.183 31.658 15.631 1.00 0.00 N ATOM 410 NH2 ARG 43 5.935 31.991 15.914 1.00 0.00 N ATOM 413 C ARG 43 8.127 38.881 13.824 1.00 0.00 C ATOM 414 O ARG 43 9.055 39.130 13.045 1.00 0.00 O ATOM 415 N SER 44 6.838 39.141 13.555 1.00 0.00 N ATOM 417 CA SER 44 6.338 39.805 12.329 1.00 0.00 C ATOM 418 CB SER 44 5.067 39.112 11.824 1.00 0.00 C ATOM 419 OG SER 44 5.314 37.750 11.515 1.00 0.00 O ATOM 421 C SER 44 5.994 41.224 12.814 1.00 0.00 C ATOM 422 O SER 44 5.986 42.193 12.045 1.00 0.00 O ATOM 423 N LYS 45 5.716 41.279 14.122 1.00 0.00 N ATOM 425 CA LYS 45 5.375 42.449 14.947 1.00 0.00 C ATOM 426 CG LYS 45 3.873 42.663 17.119 1.00 0.00 C ATOM 427 CD LYS 45 3.462 41.817 18.329 1.00 0.00 C ATOM 428 CE LYS 45 2.874 42.630 19.476 1.00 0.00 C ATOM 429 NZ LYS 45 1.556 43.255 19.179 1.00 0.00 N ATOM 433 C LYS 45 6.643 43.334 15.090 1.00 0.00 C ATOM 434 O LYS 45 6.550 44.570 15.112 1.00 0.00 O ATOM 435 CB LYS 45 4.899 41.894 16.300 1.00 0.00 C TER END