####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS368_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS368_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 13 - 45 4.98 6.88 LCS_AVERAGE: 67.41 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 20 - 44 1.85 9.79 LCS_AVERAGE: 39.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.96 9.80 LCS_AVERAGE: 19.27 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 16 3 3 4 4 7 8 8 10 12 12 15 15 16 19 20 26 27 30 33 34 LCS_GDT V 3 V 3 4 7 16 3 3 4 6 7 8 9 11 13 15 21 24 28 32 35 38 40 42 43 43 LCS_GDT Q 4 Q 4 5 7 16 3 4 5 6 7 8 9 11 13 17 21 26 30 33 36 39 40 42 43 43 LCS_GDT G 5 G 5 5 7 21 2 4 5 6 7 8 13 19 21 26 31 33 36 36 37 39 40 42 43 43 LCS_GDT P 6 P 6 5 7 21 3 4 5 6 7 8 16 20 25 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT W 7 W 7 5 7 21 3 4 5 6 7 8 18 20 25 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT V 8 V 8 5 7 21 3 3 5 6 7 8 10 12 20 26 31 33 36 36 37 39 40 42 43 43 LCS_GDT G 9 G 9 3 6 21 3 3 4 4 5 7 9 12 17 26 31 33 36 36 37 39 40 42 43 43 LCS_GDT S 10 S 10 8 8 21 3 4 8 8 8 8 9 12 17 22 30 33 36 36 37 39 40 42 43 43 LCS_GDT S 11 S 11 8 8 21 4 6 8 8 8 8 8 9 12 14 16 19 23 28 34 37 39 42 43 43 LCS_GDT Y 12 Y 12 8 8 21 4 6 8 8 8 8 8 9 10 13 15 18 23 26 32 32 39 42 43 43 LCS_GDT V 13 V 13 8 8 33 4 6 8 8 8 8 8 9 16 24 31 33 36 36 37 39 40 42 43 43 LCS_GDT A 14 A 14 8 8 33 4 6 8 8 8 8 10 12 14 19 25 31 33 36 37 39 40 42 43 43 LCS_GDT E 15 E 15 8 8 33 4 6 8 8 8 8 9 12 14 15 17 25 26 28 35 38 39 42 43 43 LCS_GDT T 16 T 16 8 8 33 4 6 8 8 8 8 10 12 15 22 28 33 36 36 37 39 40 42 43 43 LCS_GDT G 17 G 17 8 8 33 3 6 8 8 8 8 8 11 15 19 21 31 36 36 37 39 40 42 43 43 LCS_GDT Q 18 Q 18 4 4 33 3 3 4 4 4 5 8 16 21 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT N 19 N 19 4 14 33 3 3 12 14 17 20 22 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT W 20 W 20 13 25 33 8 10 17 20 21 24 25 26 27 27 29 31 34 36 37 39 40 42 43 43 LCS_GDT A 21 A 21 13 25 33 8 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT S 22 S 22 13 25 33 8 13 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT L 23 L 23 13 25 33 8 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT A 24 A 24 13 25 33 8 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT A 25 A 25 13 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT N 26 N 26 13 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT E 27 E 27 13 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT L 28 L 28 13 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT R 29 R 29 13 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT V 30 V 30 13 25 33 7 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT T 31 T 31 13 25 33 3 6 15 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT E 32 E 32 13 25 33 3 13 17 19 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT R 33 R 33 3 25 33 3 3 8 13 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT P 34 P 34 4 25 33 1 4 8 14 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT F 35 F 35 4 25 33 0 3 4 4 18 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT W 36 W 36 4 25 33 3 3 4 9 21 23 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT I 37 I 37 9 25 33 3 7 13 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT S 38 S 38 9 25 33 3 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT S 39 S 39 9 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT F 40 F 40 9 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT I 41 I 41 9 25 33 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT G 42 G 42 9 25 33 9 14 17 20 21 24 25 26 27 27 29 33 36 36 37 39 40 41 43 43 LCS_GDT R 43 R 43 9 25 33 5 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_GDT S 44 S 44 9 25 33 5 7 17 20 21 24 25 26 27 27 30 33 36 36 37 39 40 42 43 43 LCS_GDT K 45 K 45 9 11 33 3 3 5 9 16 19 23 26 27 27 31 33 36 36 37 39 40 42 43 43 LCS_AVERAGE LCS_A: 42.20 ( 19.27 39.93 67.41 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 17 20 21 24 25 26 27 27 31 33 36 36 37 39 40 42 43 43 GDT PERCENT_AT 20.45 31.82 38.64 45.45 47.73 54.55 56.82 59.09 61.36 61.36 70.45 75.00 81.82 81.82 84.09 88.64 90.91 95.45 97.73 97.73 GDT RMS_LOCAL 0.31 0.60 0.82 1.19 1.25 1.78 1.85 2.11 2.31 2.31 4.14 4.15 4.61 4.54 4.68 5.07 5.25 5.76 5.81 5.81 GDT RMS_ALL_AT 9.24 9.43 9.73 9.45 9.52 9.72 9.79 9.43 9.13 9.13 6.71 6.85 6.49 6.64 6.54 6.34 6.29 6.19 6.19 6.19 # Checking swapping # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.220 0 0.029 0.040 21.329 0.000 0.000 - LGA V 3 V 3 15.737 0 0.033 0.150 17.990 0.000 0.000 12.331 LGA Q 4 Q 4 16.598 0 0.683 0.535 21.408 0.000 0.000 19.366 LGA G 5 G 5 12.451 0 0.167 0.167 15.488 0.000 0.000 - LGA P 6 P 6 10.769 0 0.091 0.431 11.953 0.000 0.000 9.928 LGA W 7 W 7 9.900 0 0.410 1.204 11.444 0.000 0.000 11.213 LGA V 8 V 8 12.109 0 0.276 1.260 14.195 0.000 0.000 10.793 LGA G 9 G 9 11.805 0 0.056 0.056 15.774 0.000 0.000 - LGA S 10 S 10 16.173 0 0.629 0.602 17.181 0.000 0.000 16.489 LGA S 11 S 11 20.056 0 0.433 0.468 22.924 0.000 0.000 22.924 LGA Y 12 Y 12 16.772 0 0.073 0.324 17.661 0.000 0.000 12.766 LGA V 13 V 13 12.817 0 0.033 0.073 13.977 0.000 0.000 12.095 LGA A 14 A 14 17.271 0 0.014 0.015 19.315 0.000 0.000 - LGA E 15 E 15 18.460 0 0.040 1.445 26.197 0.000 0.000 26.197 LGA T 16 T 16 13.450 0 0.169 1.151 14.947 0.000 0.000 12.439 LGA G 17 G 17 12.333 0 0.293 0.293 12.481 0.000 0.000 - LGA Q 18 Q 18 9.675 0 0.625 1.101 16.725 0.000 0.000 13.399 LGA N 19 N 19 5.040 0 0.071 0.981 8.258 8.182 4.318 8.258 LGA W 20 W 20 2.015 0 0.602 1.245 13.318 58.636 16.883 13.318 LGA A 21 A 21 1.050 0 0.046 0.053 1.511 65.455 62.545 - LGA S 22 S 22 1.914 0 0.027 0.632 2.512 54.545 54.545 0.549 LGA L 23 L 23 1.797 0 0.092 1.423 6.959 62.273 35.909 5.053 LGA A 24 A 24 1.055 0 0.018 0.026 1.234 69.545 68.727 - LGA A 25 A 25 1.212 0 0.021 0.026 1.556 69.545 65.818 - LGA N 26 N 26 1.065 0 0.065 0.107 1.874 73.636 64.091 1.874 LGA E 27 E 27 0.676 0 0.070 0.853 3.417 81.818 61.010 3.417 LGA L 28 L 28 0.406 0 0.037 0.070 0.583 95.455 95.455 0.583 LGA R 29 R 29 0.296 0 0.053 1.427 7.286 100.000 58.182 7.286 LGA V 30 V 30 0.360 0 0.152 0.196 1.353 86.818 82.338 0.617 LGA T 31 T 31 2.233 0 0.708 0.637 4.140 55.000 34.545 4.047 LGA E 32 E 32 3.177 0 0.435 1.356 9.994 36.364 16.162 8.445 LGA R 33 R 33 2.817 0 0.111 0.225 9.715 28.182 10.248 9.715 LGA P 34 P 34 3.093 0 0.076 0.414 5.022 16.364 12.727 5.022 LGA F 35 F 35 3.631 0 0.424 1.347 10.705 19.545 7.107 10.705 LGA W 36 W 36 3.102 0 0.634 1.138 12.496 33.182 9.481 12.496 LGA I 37 I 37 1.773 0 0.020 0.329 6.531 52.727 32.273 6.531 LGA S 38 S 38 1.684 0 0.074 0.090 2.194 54.545 49.091 2.110 LGA S 39 S 39 1.443 0 0.046 0.667 2.301 65.455 58.485 2.301 LGA F 40 F 40 0.988 0 0.199 0.209 1.419 81.818 71.405 1.395 LGA I 41 I 41 1.471 0 0.036 0.693 2.221 65.455 55.000 1.574 LGA G 42 G 42 0.967 0 0.048 0.048 1.170 77.727 77.727 - LGA R 43 R 43 0.625 0 0.094 1.146 2.959 78.182 72.562 2.959 LGA S 44 S 44 2.315 0 0.104 0.718 3.805 27.727 31.515 2.892 LGA K 45 K 45 5.679 0 0.658 0.935 12.294 1.364 0.606 12.294 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.176 6.004 7.745 34.535 27.472 16.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 26 2.11 56.250 52.994 1.179 LGA_LOCAL RMSD: 2.106 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.426 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.176 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.787436 * X + 0.134210 * Y + -0.601607 * Z + 20.865145 Y_new = 0.119255 * X + 0.924396 * Y + 0.362312 * Z + 22.346054 Z_new = 0.604750 * X + -0.357043 * Y + 0.711898 * Z + 4.944091 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.150305 -0.649451 -0.464876 [DEG: 8.6119 -37.2108 -26.6354 ] ZXZ: -2.112861 0.778600 2.104125 [DEG: -121.0580 44.6105 120.5575 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS368_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS368_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 26 2.11 52.994 6.18 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS368_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 3a1y_A, 4aor_D, 3bma_A ATOM 20 N ALA 2 -7.541 41.340 7.916 1.00 3.89 N ATOM 21 CA ALA 2 -7.677 41.646 6.476 1.00 3.89 C ATOM 22 C ALA 2 -6.341 41.403 5.757 1.00 3.89 C ATOM 23 O ALA 2 -5.296 41.352 6.411 1.00 3.89 O ATOM 24 CB ALA 2 -8.175 43.074 6.238 1.00 5.83 C ATOM 30 N VAL 3 -6.385 41.178 4.440 1.00 3.89 N ATOM 31 CA VAL 3 -5.201 41.017 3.574 1.00 3.89 C ATOM 32 C VAL 3 -5.263 41.818 2.269 1.00 3.89 C ATOM 33 O VAL 3 -6.311 41.877 1.627 1.00 3.89 O ATOM 34 CB VAL 3 -4.946 39.542 3.241 1.00 5.83 C ATOM 35 CG1 VAL 3 -3.866 39.411 2.258 1.00 5.83 C ATOM 36 CG2 VAL 3 -4.526 38.834 4.436 1.00 5.83 C ATOM 46 N GLN 4 -4.136 42.437 1.889 1.00 3.89 N ATOM 47 CA GLN 4 -4.022 43.180 0.626 1.00 3.89 C ATOM 48 C GLN 4 -3.576 42.307 -0.563 1.00 3.89 C ATOM 49 O GLN 4 -3.864 42.622 -1.718 1.00 3.89 O ATOM 50 CB GLN 4 -2.974 44.297 0.740 1.00 5.83 C ATOM 51 CG GLN 4 -3.283 45.349 1.739 1.00 5.83 C ATOM 52 CD GLN 4 -2.222 46.419 1.847 1.00 5.83 C ATOM 53 OE1 GLN 4 -1.035 46.157 1.637 1.00 5.83 O ATOM 54 NE2 GLN 4 -2.634 47.637 2.169 1.00 5.83 N ATOM 63 N GLY 5 -2.803 41.261 -0.276 1.00 3.89 N ATOM 64 CA GLY 5 -2.167 40.431 -1.297 1.00 3.89 C ATOM 65 C GLY 5 -2.500 38.914 -1.265 1.00 3.89 C ATOM 66 O GLY 5 -3.566 38.506 -0.793 1.00 3.89 O ATOM 70 N PRO 6 -1.548 38.067 -1.731 1.00 3.89 N ATOM 71 CA PRO 6 -1.621 36.622 -1.956 1.00 3.89 C ATOM 72 C PRO 6 -2.174 35.753 -0.836 1.00 3.89 C ATOM 73 O PRO 6 -2.781 34.709 -1.103 1.00 3.89 O ATOM 74 CB PRO 6 -0.143 36.270 -2.167 1.00 5.83 C ATOM 75 CG PRO 6 0.469 37.488 -2.760 1.00 5.83 C ATOM 76 CD PRO 6 -0.209 38.631 -2.085 1.00 5.83 C ATOM 84 N TRP 7 -2.021 36.171 0.410 1.00 3.89 N ATOM 85 CA TRP 7 -2.473 35.354 1.533 1.00 3.89 C ATOM 86 C TRP 7 -3.964 34.975 1.495 1.00 3.89 C ATOM 87 O TRP 7 -4.358 34.000 2.134 1.00 3.89 O ATOM 88 CB TRP 7 -2.077 36.023 2.849 1.00 5.83 C ATOM 89 CG TRP 7 -0.609 36.016 3.005 1.00 5.83 C ATOM 90 CD1 TRP 7 0.224 35.329 2.223 1.00 5.83 C ATOM 91 CD2 TRP 7 0.227 36.667 3.982 1.00 5.83 C ATOM 92 NE1 TRP 7 1.496 35.496 2.636 1.00 5.83 N ATOM 93 CE2 TRP 7 1.523 36.288 3.709 1.00 5.83 C ATOM 94 CE3 TRP 7 -0.008 37.499 5.035 1.00 5.83 C ATOM 95 CZ2 TRP 7 2.596 36.704 4.473 1.00 5.83 C ATOM 96 CZ3 TRP 7 1.082 37.894 5.821 1.00 5.83 C ATOM 97 CH2 TRP 7 2.337 37.508 5.541 1.00 5.83 C ATOM 108 N VAL 8 -4.781 35.729 0.750 1.00 3.89 N ATOM 109 CA VAL 8 -6.201 35.415 0.626 1.00 3.89 C ATOM 110 C VAL 8 -6.605 35.276 -0.830 1.00 3.55 C ATOM 111 O VAL 8 -7.778 35.443 -1.165 1.00 3.65 O ATOM 112 CB VAL 8 -7.076 36.466 1.285 1.00 5.83 C ATOM 113 CG1 VAL 8 -6.816 36.467 2.778 1.00 5.83 C ATOM 114 CG2 VAL 8 -6.793 37.790 0.621 1.00 5.83 C ATOM 124 N GLY 9 -5.639 34.977 -1.692 1.00 3.30 N ATOM 125 CA GLY 9 -5.876 34.899 -3.125 1.00 3.09 C ATOM 126 C GLY 9 -7.057 34.020 -3.548 1.00 2.31 C ATOM 127 O GLY 9 -7.973 34.514 -4.206 1.00 2.64 O ATOM 131 N SER 10 -7.043 32.723 -3.217 1.00 1.97 N ATOM 132 CA SER 10 -8.164 31.876 -3.646 1.00 1.58 C ATOM 133 C SER 10 -8.284 30.522 -2.954 1.00 1.31 C ATOM 134 O SER 10 -7.315 29.996 -2.413 1.00 1.22 O ATOM 135 CB SER 10 -8.066 31.621 -5.140 1.00 2.37 C ATOM 136 OG SER 10 -6.931 30.854 -5.444 1.00 2.37 O ATOM 142 N SER 11 -9.473 29.929 -3.058 1.00 1.54 N ATOM 143 CA SER 11 -9.715 28.548 -2.653 1.00 1.61 C ATOM 144 C SER 11 -9.106 28.184 -1.304 1.00 1.51 C ATOM 145 O SER 11 -9.123 28.971 -0.351 1.00 1.49 O ATOM 146 CB SER 11 -9.175 27.606 -3.719 1.00 2.42 C ATOM 147 OG SER 11 -9.556 26.276 -3.464 1.00 2.42 O ATOM 153 N TYR 12 -8.514 26.991 -1.274 1.00 1.83 N ATOM 154 CA TYR 12 -7.834 26.434 -0.112 1.00 1.99 C ATOM 155 C TYR 12 -6.667 27.298 0.352 1.00 1.61 C ATOM 156 O TYR 12 -6.206 27.178 1.494 1.00 1.95 O ATOM 157 CB TYR 12 -7.309 25.033 -0.431 1.00 2.98 C ATOM 158 CG TYR 12 -6.050 25.031 -1.276 1.00 2.98 C ATOM 159 CD1 TYR 12 -4.811 25.063 -0.644 1.00 2.98 C ATOM 160 CD2 TYR 12 -6.120 25.004 -2.662 1.00 2.98 C ATOM 161 CE1 TYR 12 -3.658 25.062 -1.386 1.00 2.98 C ATOM 162 CE2 TYR 12 -4.955 25.003 -3.407 1.00 2.98 C ATOM 163 CZ TYR 12 -3.731 25.031 -2.767 1.00 2.98 C ATOM 164 OH TYR 12 -2.581 25.033 -3.491 1.00 2.98 O ATOM 174 N VAL 13 -6.124 28.139 -0.532 1.00 1.15 N ATOM 175 CA VAL 13 -4.996 28.951 -0.135 1.00 1.03 C ATOM 176 C VAL 13 -5.493 29.980 0.830 1.00 0.86 C ATOM 177 O VAL 13 -4.924 30.178 1.905 1.00 0.89 O ATOM 178 CB VAL 13 -4.389 29.693 -1.320 1.00 1.54 C ATOM 179 CG1 VAL 13 -3.316 30.633 -0.806 1.00 1.54 C ATOM 180 CG2 VAL 13 -3.909 28.685 -2.348 1.00 1.54 C ATOM 190 N ALA 14 -6.586 30.628 0.437 1.00 0.81 N ATOM 191 CA ALA 14 -7.190 31.640 1.272 1.00 0.75 C ATOM 192 C ALA 14 -7.650 31.036 2.588 1.00 0.69 C ATOM 193 O ALA 14 -7.443 31.621 3.649 1.00 0.76 O ATOM 194 CB ALA 14 -8.358 32.292 0.555 1.00 1.12 C ATOM 200 N GLU 15 -8.214 29.821 2.537 1.00 0.72 N ATOM 201 CA GLU 15 -8.662 29.179 3.771 1.00 0.84 C ATOM 202 C GLU 15 -7.480 28.901 4.700 1.00 0.79 C ATOM 203 O GLU 15 -7.553 29.148 5.908 1.00 0.99 O ATOM 204 CB GLU 15 -9.382 27.863 3.458 1.00 1.26 C ATOM 205 CG GLU 15 -10.740 28.017 2.777 1.00 1.26 C ATOM 206 CD GLU 15 -11.367 26.694 2.382 1.00 1.26 C ATOM 207 OE1 GLU 15 -10.691 25.690 2.433 1.00 1.26 O ATOM 208 OE2 GLU 15 -12.527 26.691 2.036 1.00 1.26 O ATOM 215 N THR 16 -6.361 28.452 4.126 1.00 0.71 N ATOM 216 CA THR 16 -5.161 28.168 4.898 1.00 0.84 C ATOM 217 C THR 16 -4.633 29.450 5.509 1.00 0.75 C ATOM 218 O THR 16 -4.298 29.494 6.697 1.00 0.79 O ATOM 219 CB THR 16 -4.070 27.529 4.021 1.00 1.26 C ATOM 220 OG1 THR 16 -4.552 26.291 3.480 1.00 1.26 O ATOM 221 CG2 THR 16 -2.817 27.277 4.847 1.00 1.26 C ATOM 229 N GLY 17 -4.593 30.505 4.694 1.00 0.69 N ATOM 230 CA GLY 17 -4.129 31.820 5.094 1.00 0.67 C ATOM 231 C GLY 17 -4.920 32.312 6.293 1.00 0.62 C ATOM 232 O GLY 17 -4.340 32.696 7.305 1.00 0.64 O ATOM 236 N GLN 18 -6.245 32.282 6.185 1.00 0.68 N ATOM 237 CA GLN 18 -7.140 32.732 7.242 1.00 0.81 C ATOM 238 C GLN 18 -6.996 31.890 8.521 1.00 0.84 C ATOM 239 O GLN 18 -6.990 32.427 9.639 1.00 0.94 O ATOM 240 CB GLN 18 -8.571 32.668 6.705 1.00 1.22 C ATOM 241 CG GLN 18 -8.863 33.709 5.612 1.00 1.22 C ATOM 242 CD GLN 18 -10.190 33.471 4.902 1.00 1.22 C ATOM 243 OE1 GLN 18 -10.700 32.347 4.841 1.00 1.22 O ATOM 244 NE2 GLN 18 -10.761 34.537 4.353 1.00 1.22 N ATOM 253 N ASN 19 -6.826 30.571 8.378 1.00 0.85 N ATOM 254 CA ASN 19 -6.652 29.734 9.561 1.00 0.99 C ATOM 255 C ASN 19 -5.334 30.087 10.255 1.00 0.93 C ATOM 256 O ASN 19 -5.277 30.231 11.488 1.00 1.00 O ATOM 257 CB ASN 19 -6.698 28.269 9.167 1.00 1.48 C ATOM 258 CG ASN 19 -8.098 27.809 8.806 1.00 1.48 C ATOM 259 OD1 ASN 19 -9.100 28.428 9.189 1.00 1.48 O ATOM 260 ND2 ASN 19 -8.182 26.730 8.068 1.00 1.48 N ATOM 267 N TRP 20 -4.286 30.284 9.449 1.00 0.82 N ATOM 268 CA TRP 20 -2.982 30.689 9.939 1.00 0.81 C ATOM 269 C TRP 20 -3.077 32.037 10.610 1.00 0.74 C ATOM 270 O TRP 20 -2.504 32.235 11.673 1.00 0.76 O ATOM 271 CB TRP 20 -1.944 30.730 8.822 1.00 1.22 C ATOM 272 CG TRP 20 -0.604 31.273 9.258 1.00 1.22 C ATOM 273 CD1 TRP 20 -0.051 32.425 8.812 1.00 1.22 C ATOM 274 CD2 TRP 20 0.337 30.727 10.219 1.00 1.22 C ATOM 275 NE1 TRP 20 1.168 32.638 9.409 1.00 1.22 N ATOM 276 CE2 TRP 20 1.424 31.612 10.270 1.00 1.22 C ATOM 277 CE3 TRP 20 0.352 29.581 11.022 1.00 1.22 C ATOM 278 CZ2 TRP 20 2.514 31.392 11.097 1.00 1.22 C ATOM 279 CZ3 TRP 20 1.451 29.363 11.851 1.00 1.22 C ATOM 280 CH2 TRP 20 2.503 30.246 11.884 1.00 1.22 C ATOM 291 N ALA 21 -3.805 32.970 9.996 1.00 0.68 N ATOM 292 CA ALA 21 -3.941 34.306 10.540 1.00 0.66 C ATOM 293 C ALA 21 -4.524 34.284 11.925 1.00 0.70 C ATOM 294 O ALA 21 -4.069 35.011 12.795 1.00 0.65 O ATOM 295 CB ALA 21 -4.855 35.121 9.679 1.00 0.99 C ATOM 301 N SER 22 -5.516 33.421 12.157 1.00 0.80 N ATOM 302 CA SER 22 -6.105 33.351 13.485 1.00 0.89 C ATOM 303 C SER 22 -5.087 32.829 14.498 1.00 0.87 C ATOM 304 O SER 22 -4.933 33.377 15.598 1.00 0.88 O ATOM 305 CB SER 22 -7.325 32.448 13.469 1.00 1.33 C ATOM 306 OG SER 22 -8.357 32.995 12.686 1.00 1.33 O ATOM 312 N LEU 23 -4.353 31.782 14.119 1.00 0.88 N ATOM 313 CA LEU 23 -3.364 31.231 15.035 1.00 0.94 C ATOM 314 C LEU 23 -2.249 32.223 15.307 1.00 0.83 C ATOM 315 O LEU 23 -1.928 32.526 16.463 1.00 0.86 O ATOM 316 CB LEU 23 -2.765 29.939 14.465 1.00 1.41 C ATOM 317 CG LEU 23 -1.634 29.325 15.305 1.00 1.41 C ATOM 318 CD1 LEU 23 -2.155 28.974 16.690 1.00 1.41 C ATOM 319 CD2 LEU 23 -1.093 28.093 14.603 1.00 1.41 C ATOM 331 N ALA 24 -1.669 32.738 14.231 1.00 0.75 N ATOM 332 CA ALA 24 -0.581 33.681 14.288 1.00 0.72 C ATOM 333 C ALA 24 -0.996 34.949 15.010 1.00 0.66 C ATOM 334 O ALA 24 -0.230 35.489 15.784 1.00 0.68 O ATOM 335 CB ALA 24 -0.101 33.985 12.891 1.00 1.08 C ATOM 341 N ALA 25 -2.234 35.413 14.819 1.00 0.65 N ATOM 342 CA ALA 25 -2.670 36.624 15.496 1.00 0.67 C ATOM 343 C ALA 25 -2.573 36.458 16.993 1.00 0.69 C ATOM 344 O ALA 25 -2.107 37.340 17.722 1.00 0.71 O ATOM 345 CB ALA 25 -4.102 36.933 15.119 1.00 1.01 C ATOM 351 N ASN 26 -2.929 35.279 17.479 1.00 0.73 N ATOM 352 CA ASN 26 -2.833 35.076 18.903 1.00 0.81 C ATOM 353 C ASN 26 -1.371 34.934 19.339 1.00 0.77 C ATOM 354 O ASN 26 -0.918 35.630 20.250 1.00 0.78 O ATOM 355 CB ASN 26 -3.651 33.865 19.287 1.00 1.22 C ATOM 356 CG ASN 26 -5.127 34.134 19.197 1.00 1.22 C ATOM 357 OD1 ASN 26 -5.589 35.283 19.251 1.00 1.22 O ATOM 358 ND2 ASN 26 -5.887 33.082 19.049 1.00 1.22 N ATOM 365 N GLU 27 -0.602 34.101 18.636 1.00 0.80 N ATOM 366 CA GLU 27 0.792 33.851 19.020 1.00 0.90 C ATOM 367 C GLU 27 1.686 35.096 18.945 1.00 0.86 C ATOM 368 O GLU 27 2.535 35.327 19.813 1.00 0.97 O ATOM 369 CB GLU 27 1.402 32.747 18.146 1.00 1.35 C ATOM 370 CG GLU 27 0.849 31.339 18.404 1.00 1.35 C ATOM 371 CD GLU 27 1.467 30.288 17.507 1.00 1.35 C ATOM 372 OE1 GLU 27 2.177 30.652 16.601 1.00 1.35 O ATOM 373 OE2 GLU 27 1.240 29.122 17.740 1.00 1.35 O ATOM 380 N LEU 28 1.442 35.935 17.947 1.00 0.76 N ATOM 381 CA LEU 28 2.227 37.133 17.696 1.00 0.86 C ATOM 382 C LEU 28 1.709 38.324 18.483 1.00 0.85 C ATOM 383 O LEU 28 2.270 39.417 18.394 1.00 1.01 O ATOM 384 CB LEU 28 2.143 37.490 16.212 1.00 1.29 C ATOM 385 CG LEU 28 2.665 36.441 15.237 1.00 1.29 C ATOM 386 CD1 LEU 28 2.396 36.918 13.872 1.00 1.29 C ATOM 387 CD2 LEU 28 4.095 36.199 15.435 1.00 1.29 C ATOM 399 N ARG 29 0.625 38.119 19.237 1.00 0.78 N ATOM 400 CA ARG 29 -0.049 39.157 19.997 1.00 0.91 C ATOM 401 C ARG 29 -0.536 40.312 19.117 1.00 1.02 C ATOM 402 O ARG 29 -0.417 41.484 19.486 1.00 1.21 O ATOM 403 CB ARG 29 0.855 39.678 21.107 1.00 1.36 C ATOM 404 CG ARG 29 0.836 38.829 22.371 1.00 1.36 C ATOM 405 CD ARG 29 1.499 37.478 22.179 1.00 1.36 C ATOM 406 NE ARG 29 1.561 36.740 23.439 1.00 1.36 N ATOM 407 CZ ARG 29 1.995 35.462 23.608 1.00 1.36 C ATOM 408 NH1 ARG 29 2.426 34.725 22.601 1.00 1.36 N ATOM 409 NH2 ARG 29 1.984 34.939 24.823 1.00 1.36 N ATOM 423 N VAL 30 -1.085 39.975 17.946 1.00 0.94 N ATOM 424 CA VAL 30 -1.672 40.939 17.025 1.00 1.09 C ATOM 425 C VAL 30 -3.058 40.518 16.622 1.00 1.32 C ATOM 426 O VAL 30 -3.228 39.845 15.610 1.00 2.00 O ATOM 427 CB VAL 30 -0.862 41.021 15.721 1.00 1.64 C ATOM 428 CG1 VAL 30 -1.483 42.056 14.804 1.00 1.64 C ATOM 429 CG2 VAL 30 0.549 41.357 15.991 1.00 1.64 C ATOM 439 N THR 31 -4.058 41.000 17.329 1.00 1.29 N ATOM 440 CA THR 31 -5.424 40.585 17.057 1.00 1.57 C ATOM 441 C THR 31 -6.269 41.799 16.737 1.00 1.54 C ATOM 442 O THR 31 -5.871 42.922 17.026 1.00 1.90 O ATOM 443 CB THR 31 -6.008 39.828 18.271 1.00 2.35 C ATOM 444 OG1 THR 31 -6.104 40.718 19.394 1.00 2.35 O ATOM 445 CG2 THR 31 -5.101 38.641 18.652 1.00 2.35 C ATOM 453 N GLU 32 -7.450 41.575 16.160 1.00 2.03 N ATOM 454 CA GLU 32 -8.373 42.662 15.822 1.00 2.36 C ATOM 455 C GLU 32 -7.727 43.752 14.944 1.00 1.80 C ATOM 456 O GLU 32 -7.814 44.945 15.258 1.00 2.42 O ATOM 457 CB GLU 32 -8.946 43.290 17.104 1.00 3.54 C ATOM 458 CG GLU 32 -9.739 42.317 17.983 1.00 3.54 C ATOM 459 CD GLU 32 -10.398 42.975 19.180 1.00 3.54 C ATOM 460 OE1 GLU 32 -10.188 44.149 19.387 1.00 3.54 O ATOM 461 OE2 GLU 32 -11.108 42.299 19.885 1.00 3.54 O ATOM 468 N ARG 33 -7.079 43.340 13.845 1.00 1.46 N ATOM 469 CA ARG 33 -6.417 44.290 12.947 1.00 1.65 C ATOM 470 C ARG 33 -6.694 44.059 11.449 1.00 1.85 C ATOM 471 O ARG 33 -7.036 42.943 11.026 1.00 1.90 O ATOM 472 CB ARG 33 -4.895 44.256 13.140 1.00 2.47 C ATOM 473 CG ARG 33 -4.390 44.706 14.490 1.00 2.47 C ATOM 474 CD ARG 33 -4.589 46.169 14.664 1.00 2.47 C ATOM 475 NE ARG 33 -4.044 46.660 15.918 1.00 2.47 N ATOM 476 CZ ARG 33 -4.721 46.705 17.089 1.00 2.47 C ATOM 477 NH1 ARG 33 -5.971 46.283 17.168 1.00 2.47 N ATOM 478 NH2 ARG 33 -4.121 47.177 18.173 1.00 2.47 N ATOM 492 N PRO 34 -6.633 45.121 10.632 1.00 2.68 N ATOM 493 CA PRO 34 -6.648 45.052 9.191 1.00 3.28 C ATOM 494 C PRO 34 -5.213 44.751 8.739 1.00 2.96 C ATOM 495 O PRO 34 -4.257 45.101 9.403 1.00 3.19 O ATOM 496 CB PRO 34 -7.087 46.468 8.795 1.00 4.92 C ATOM 497 CG PRO 34 -6.588 47.350 9.915 1.00 4.92 C ATOM 498 CD PRO 34 -6.697 46.491 11.177 1.00 4.92 C ATOM 506 N PHE 35 -5.103 44.159 7.570 1.00 2.94 N ATOM 507 CA PHE 35 -3.846 43.914 6.896 1.00 3.10 C ATOM 508 C PHE 35 -2.763 43.219 7.700 1.00 2.57 C ATOM 509 O PHE 35 -1.701 43.797 7.961 1.00 3.19 O ATOM 510 CB PHE 35 -3.375 45.201 6.283 1.00 4.65 C ATOM 511 CG PHE 35 -4.475 45.677 5.462 1.00 4.65 C ATOM 512 CD1 PHE 35 -5.014 46.914 5.632 1.00 4.65 C ATOM 513 CD2 PHE 35 -5.056 44.811 4.564 1.00 4.65 C ATOM 514 CE1 PHE 35 -6.104 47.303 4.881 1.00 4.65 C ATOM 515 CE2 PHE 35 -6.130 45.173 3.813 1.00 4.65 C ATOM 516 CZ PHE 35 -6.661 46.428 3.964 1.00 4.65 C ATOM 526 N TRP 36 -2.989 41.929 8.023 1.00 1.98 N ATOM 527 CA TRP 36 -1.972 41.120 8.738 1.00 2.31 C ATOM 528 C TRP 36 -0.727 40.987 7.859 1.00 1.87 C ATOM 529 O TRP 36 0.407 40.845 8.330 1.00 2.48 O ATOM 530 CB TRP 36 -2.531 39.789 9.282 1.00 3.46 C ATOM 531 CG TRP 36 -3.069 38.715 8.350 1.00 3.46 C ATOM 532 CD1 TRP 36 -4.321 38.674 7.936 1.00 3.46 C ATOM 533 CD2 TRP 36 -2.457 37.485 7.843 1.00 3.46 C ATOM 534 NE1 TRP 36 -4.553 37.555 7.187 1.00 3.46 N ATOM 535 CE2 TRP 36 -3.427 36.828 7.111 1.00 3.46 C ATOM 536 CE3 TRP 36 -1.217 36.905 7.960 1.00 3.46 C ATOM 537 CZ2 TRP 36 -3.188 35.618 6.472 1.00 3.46 C ATOM 538 CZ3 TRP 36 -0.977 35.677 7.347 1.00 3.46 C ATOM 539 CH2 TRP 36 -1.940 35.056 6.615 1.00 3.46 C ATOM 550 N ILE 37 -0.942 41.234 6.566 1.00 1.33 N ATOM 551 CA ILE 37 0.080 41.261 5.539 1.00 1.69 C ATOM 552 C ILE 37 1.147 42.327 5.834 1.00 1.43 C ATOM 553 O ILE 37 2.284 42.232 5.343 1.00 1.54 O ATOM 554 CB ILE 37 -0.583 41.461 4.169 1.00 2.54 C ATOM 555 CG1 ILE 37 0.406 41.119 3.136 1.00 2.54 C ATOM 556 CG2 ILE 37 -1.106 42.865 4.009 1.00 2.54 C ATOM 557 CD1 ILE 37 -0.160 40.923 1.755 1.00 2.54 C ATOM 569 N SER 38 0.778 43.340 6.638 1.00 1.46 N ATOM 570 CA SER 38 1.724 44.345 7.087 1.00 1.54 C ATOM 571 C SER 38 1.855 44.316 8.634 1.00 1.67 C ATOM 572 O SER 38 2.932 44.564 9.177 1.00 1.86 O ATOM 573 CB SER 38 1.290 45.727 6.624 1.00 2.31 C ATOM 574 OG SER 38 0.061 46.106 7.184 1.00 2.31 O ATOM 580 N SER 39 0.801 43.899 9.355 1.00 1.75 N ATOM 581 CA SER 39 0.844 43.971 10.825 1.00 2.03 C ATOM 582 C SER 39 1.619 42.838 11.504 1.00 2.00 C ATOM 583 O SER 39 2.024 42.978 12.660 1.00 2.25 O ATOM 584 CB SER 39 -0.556 44.036 11.406 1.00 3.04 C ATOM 585 OG SER 39 -1.211 45.210 11.017 1.00 3.04 O ATOM 591 N PHE 40 1.887 41.740 10.793 1.00 1.87 N ATOM 592 CA PHE 40 2.694 40.688 11.397 1.00 2.17 C ATOM 593 C PHE 40 4.171 40.834 10.983 1.00 2.05 C ATOM 594 O PHE 40 4.996 39.938 11.242 1.00 2.47 O ATOM 595 CB PHE 40 2.256 39.280 10.997 1.00 3.25 C ATOM 596 CG PHE 40 0.882 38.786 11.419 1.00 3.25 C ATOM 597 CD1 PHE 40 0.076 39.419 12.354 1.00 3.25 C ATOM 598 CD2 PHE 40 0.443 37.589 10.900 1.00 3.25 C ATOM 599 CE1 PHE 40 -1.153 38.850 12.707 1.00 3.25 C ATOM 600 CE2 PHE 40 -0.758 37.037 11.259 1.00 3.25 C ATOM 601 CZ PHE 40 -1.552 37.661 12.150 1.00 3.25 C ATOM 611 N ILE 41 4.502 41.925 10.290 1.00 1.71 N ATOM 612 CA ILE 41 5.858 42.139 9.825 1.00 1.94 C ATOM 613 C ILE 41 6.753 42.514 10.994 1.00 1.83 C ATOM 614 O ILE 41 6.425 43.372 11.811 1.00 1.63 O ATOM 615 CB ILE 41 5.850 43.191 8.698 1.00 2.91 C ATOM 616 CG1 ILE 41 5.002 42.647 7.557 1.00 2.91 C ATOM 617 CG2 ILE 41 7.204 43.527 8.197 1.00 2.91 C ATOM 618 CD1 ILE 41 5.525 41.336 6.992 1.00 2.91 C ATOM 630 N GLY 42 7.886 41.834 11.093 1.00 2.23 N ATOM 631 CA GLY 42 8.819 42.057 12.186 1.00 2.46 C ATOM 632 C GLY 42 8.531 41.184 13.417 1.00 2.39 C ATOM 633 O GLY 42 9.198 41.316 14.452 1.00 2.89 O ATOM 637 N ARG 43 7.540 40.288 13.324 1.00 1.97 N ATOM 638 CA ARG 43 7.215 39.432 14.464 1.00 2.10 C ATOM 639 C ARG 43 7.534 37.958 14.140 1.00 1.76 C ATOM 640 O ARG 43 7.130 37.431 13.094 1.00 1.77 O ATOM 641 CB ARG 43 5.757 39.625 14.827 1.00 3.15 C ATOM 642 CG ARG 43 5.404 41.038 15.238 1.00 3.15 C ATOM 643 CD ARG 43 3.976 41.172 15.528 1.00 3.15 C ATOM 644 NE ARG 43 3.598 42.554 15.796 1.00 3.15 N ATOM 645 CZ ARG 43 3.587 43.130 17.018 1.00 3.15 C ATOM 646 NH1 ARG 43 3.927 42.437 18.081 1.00 3.15 N ATOM 647 NH2 ARG 43 3.228 44.398 17.146 1.00 3.15 N ATOM 661 N SER 44 8.294 37.308 15.037 1.00 2.10 N ATOM 662 CA SER 44 8.759 35.924 14.844 1.00 1.99 C ATOM 663 C SER 44 7.647 34.894 14.705 1.00 1.53 C ATOM 664 O SER 44 6.727 34.858 15.512 1.00 2.21 O ATOM 665 CB SER 44 9.654 35.518 15.994 1.00 2.98 C ATOM 666 OG SER 44 10.021 34.172 15.886 1.00 2.98 O ATOM 672 N LYS 45 7.784 34.007 13.715 1.00 1.35 N ATOM 673 CA LYS 45 6.772 32.987 13.439 1.00 1.98 C ATOM 674 C LYS 45 7.269 31.539 13.514 1.00 2.00 C ATOM 675 O LYS 45 6.513 30.648 13.900 1.00 2.11 O ATOM 676 CB LYS 45 6.222 33.240 12.037 1.00 2.97 C ATOM 677 CG LYS 45 5.522 34.574 11.907 1.00 2.97 C ATOM 678 CD LYS 45 5.089 34.880 10.498 1.00 2.97 C ATOM 679 CE LYS 45 4.529 36.287 10.428 1.00 2.97 C ATOM 680 NZ LYS 45 5.608 37.343 10.660 1.00 2.97 N TER 3519 END