####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS366_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.94 7.23 LONGEST_CONTINUOUS_SEGMENT: 35 9 - 43 4.98 7.30 LCS_AVERAGE: 74.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.95 8.47 LCS_AVERAGE: 28.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.95 8.96 LONGEST_CONTINUOUS_SEGMENT: 12 21 - 32 0.95 9.02 LCS_AVERAGE: 17.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 0 3 3 3 4 6 9 13 17 21 25 27 29 31 33 34 37 37 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 6 11 15 17 19 21 25 27 29 32 34 35 36 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 7 11 15 17 19 21 25 27 29 30 34 35 36 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 7 11 15 19 21 25 28 29 31 33 35 37 37 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 7 11 15 17 21 25 28 29 31 33 35 37 37 39 40 LCS_GDT W 7 W 7 5 5 34 3 5 5 5 6 6 8 10 17 19 23 25 27 30 32 34 37 37 39 40 LCS_GDT V 8 V 8 3 10 35 3 3 14 16 17 18 19 22 25 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT G 9 G 9 6 10 35 3 5 6 9 17 18 19 21 24 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT S 10 S 10 8 10 35 3 5 8 9 15 17 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 11 S 11 8 10 35 3 5 8 9 10 12 14 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT Y 12 Y 12 8 10 35 3 6 8 9 10 12 14 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 13 V 13 8 10 35 3 6 8 9 10 15 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 14 A 14 8 10 35 4 6 8 9 10 12 14 17 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 15 E 15 8 10 35 4 6 8 9 10 12 14 14 15 16 22 26 30 32 33 34 36 37 39 40 LCS_GDT T 16 T 16 8 10 35 4 6 8 9 10 12 14 14 15 20 25 27 30 32 33 35 37 37 39 40 LCS_GDT G 17 G 17 8 10 35 4 6 8 9 10 12 14 14 15 16 18 23 27 30 33 35 37 37 39 40 LCS_GDT Q 18 Q 18 4 10 35 3 3 4 8 10 12 14 14 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 19 N 19 4 16 35 3 3 4 4 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 20 W 20 12 18 35 7 10 13 16 17 18 19 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 21 A 21 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 22 S 22 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 23 L 23 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 24 A 24 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 25 A 25 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 26 N 26 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 27 E 27 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 28 L 28 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 29 R 29 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 30 V 30 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT T 31 T 31 12 18 35 3 8 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 32 E 32 12 18 35 3 8 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 33 R 33 11 18 35 3 8 12 15 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT P 34 P 34 5 18 35 2 4 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 35 F 35 3 18 35 3 3 3 5 8 13 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 36 W 36 7 18 35 3 10 13 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 37 I 37 7 18 35 4 6 9 11 13 16 18 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 38 S 38 7 9 35 4 6 7 8 8 9 14 18 22 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 39 S 39 7 9 35 4 6 7 8 8 11 14 18 23 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 40 F 40 7 9 35 4 6 7 8 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 41 I 41 7 9 35 4 6 7 8 8 11 14 18 23 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT G 42 G 42 7 9 35 0 6 7 8 8 9 12 17 20 24 25 27 30 32 33 34 35 37 38 39 LCS_GDT R 43 R 43 7 9 35 0 6 7 8 8 11 11 13 20 22 25 27 30 32 33 34 35 36 38 39 LCS_GDT S 44 S 44 3 9 33 1 3 3 5 6 9 10 10 11 13 20 22 26 29 29 31 33 33 35 35 LCS_GDT K 45 K 45 3 3 14 0 3 3 4 4 5 5 8 8 11 13 16 16 17 20 21 22 25 26 28 LCS_AVERAGE LCS_A: 40.24 ( 17.87 28.15 74.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 GDT PERCENT_AT 15.91 22.73 31.82 36.36 38.64 40.91 45.45 50.00 56.82 59.09 59.09 63.64 68.18 72.73 75.00 79.55 84.09 84.09 88.64 90.91 GDT RMS_LOCAL 0.24 0.59 1.03 1.20 1.34 1.48 2.47 2.53 2.86 2.93 2.93 3.51 4.14 4.45 4.62 4.88 5.18 5.18 5.51 5.72 GDT RMS_ALL_AT 9.13 8.77 8.82 8.72 8.68 8.73 7.47 7.81 7.61 7.69 7.69 7.45 7.21 7.35 7.42 7.18 7.25 7.25 7.32 7.25 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.877 0 0.037 0.052 10.393 0.000 0.000 - LGA V 3 V 3 10.952 0 0.586 0.637 12.565 0.000 0.000 12.565 LGA Q 4 Q 4 11.827 0 0.038 0.928 18.689 0.000 0.000 18.538 LGA G 5 G 5 8.921 0 0.139 0.139 10.709 0.000 0.000 - LGA P 6 P 6 8.122 0 0.690 0.610 9.931 0.000 0.000 9.303 LGA W 7 W 7 9.226 0 0.520 1.207 20.053 0.000 0.000 19.689 LGA V 8 V 8 3.043 0 0.601 1.443 5.124 21.364 12.987 5.080 LGA G 9 G 9 4.250 0 0.439 0.439 4.250 17.273 17.273 - LGA S 10 S 10 3.188 0 0.038 0.140 4.348 17.273 17.879 2.758 LGA S 11 S 11 4.260 0 0.117 0.599 5.940 8.636 6.970 4.179 LGA Y 12 Y 12 4.799 0 0.055 1.272 11.706 2.273 1.212 11.706 LGA V 13 V 13 5.329 0 0.162 1.217 9.573 1.364 0.779 6.445 LGA A 14 A 14 10.288 0 0.085 0.091 13.984 0.000 0.000 - LGA E 15 E 15 13.079 0 0.046 1.149 16.001 0.000 0.000 16.001 LGA T 16 T 16 10.983 0 0.042 0.166 11.811 0.000 0.000 6.615 LGA G 17 G 17 11.929 0 0.598 0.598 11.929 0.000 0.000 - LGA Q 18 Q 18 9.098 0 0.663 1.197 14.348 0.000 0.000 13.568 LGA N 19 N 19 3.878 0 0.040 0.988 7.140 16.818 10.682 7.140 LGA W 20 W 20 3.350 0 0.584 1.306 14.433 30.455 8.701 14.433 LGA A 21 A 21 1.490 0 0.037 0.044 2.090 66.818 66.545 - LGA S 22 S 22 1.475 0 0.028 0.632 2.204 61.818 58.485 1.015 LGA L 23 L 23 1.740 0 0.061 0.142 4.156 62.273 38.864 4.156 LGA A 24 A 24 1.540 0 0.029 0.031 1.977 58.182 56.727 - LGA A 25 A 25 1.465 0 0.032 0.033 1.975 58.182 59.636 - LGA N 26 N 26 1.373 0 0.055 0.103 1.853 65.455 60.000 1.853 LGA E 27 E 27 1.222 0 0.067 0.867 3.415 58.182 52.323 3.415 LGA L 28 L 28 1.812 0 0.040 0.055 2.301 44.545 47.727 1.821 LGA R 29 R 29 2.033 0 0.088 1.407 9.750 41.364 21.983 9.750 LGA V 30 V 30 2.089 0 0.103 1.145 3.251 59.091 45.714 3.251 LGA T 31 T 31 0.710 0 0.655 0.972 4.130 60.000 48.312 2.637 LGA E 32 E 32 1.060 0 0.100 1.448 4.157 74.091 47.677 3.735 LGA R 33 R 33 2.730 0 0.016 0.760 14.620 20.455 7.438 14.620 LGA P 34 P 34 1.951 0 0.613 0.619 4.792 29.545 26.234 3.534 LGA F 35 F 35 3.763 0 0.603 1.408 10.207 34.545 12.562 10.207 LGA W 36 W 36 1.268 0 0.616 1.144 6.180 58.182 34.675 5.053 LGA I 37 I 37 4.216 0 0.102 0.948 8.594 5.000 2.500 8.594 LGA S 38 S 38 7.967 0 0.121 0.650 10.662 0.000 0.000 10.662 LGA S 39 S 39 7.367 0 0.160 0.706 8.734 0.000 0.000 7.790 LGA F 40 F 40 4.665 0 0.130 1.304 8.394 0.455 3.306 8.102 LGA I 41 I 41 8.613 0 0.600 0.572 12.186 0.000 0.000 11.491 LGA G 42 G 42 11.909 0 0.567 0.567 14.318 0.000 0.000 - LGA R 43 R 43 12.304 0 0.609 1.270 14.125 0.000 0.000 12.595 LGA S 44 S 44 18.016 0 0.623 0.844 21.583 0.000 0.000 18.204 LGA K 45 K 45 21.245 0 0.030 0.878 23.264 0.000 0.000 20.366 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.016 7.119 8.435 22.128 17.436 8.312 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.53 47.159 43.212 0.835 LGA_LOCAL RMSD: 2.535 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.807 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.016 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.899873 * X + 0.226666 * Y + 0.372626 * Z + -84.683899 Y_new = 0.188297 * X + -0.972530 * Y + 0.136856 * Z + 57.148682 Z_new = 0.393411 * X + -0.052989 * Y + -0.917834 * Z + 58.584534 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.206272 -0.404339 -3.083924 [DEG: 11.8185 -23.1669 -176.6958 ] ZXZ: 1.922777 2.733387 1.704681 [DEG: 110.1670 156.6115 97.6710 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS366_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.53 43.212 7.02 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS366_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 1557 N ALA 2 4.659 40.508 15.083 1.00 2.07 N ATOM 1558 CA ALA 2 3.716 41.485 15.633 1.00 2.07 C ATOM 1559 C ALA 2 4.462 42.670 16.261 1.00 2.07 C ATOM 1560 O ALA 2 5.560 42.479 16.789 1.00 2.07 O ATOM 1561 CB ALA 2 2.816 40.822 16.649 1.00 2.07 C ATOM 1562 N VAL 3 3.883 43.891 16.223 1.00 1.89 N ATOM 1563 CA VAL 3 2.543 44.187 15.688 1.00 1.89 C ATOM 1564 C VAL 3 2.482 44.519 14.203 1.00 1.89 C ATOM 1565 O VAL 3 1.709 43.899 13.475 1.00 1.89 O ATOM 1566 CB VAL 3 1.909 45.333 16.474 1.00 1.89 C ATOM 1567 CG1 VAL 3 0.571 45.693 15.847 1.00 1.89 C ATOM 1568 CG2 VAL 3 1.741 44.900 17.927 1.00 1.89 C ATOM 1569 N GLN 4 3.268 45.480 13.728 1.00 1.73 N ATOM 1570 CA GLN 4 3.153 45.803 12.309 1.00 1.73 C ATOM 1571 C GLN 4 4.017 44.866 11.500 1.00 1.73 C ATOM 1572 O GLN 4 5.134 44.543 11.892 1.00 1.73 O ATOM 1573 CB GLN 4 3.514 47.257 12.016 1.00 1.73 C ATOM 1574 CG GLN 4 2.588 48.264 12.666 1.00 1.73 C ATOM 1575 CD GLN 4 1.141 48.129 12.170 1.00 1.73 C ATOM 1576 NE2 GLN 4 0.223 48.033 13.122 1.00 1.73 N ATOM 1577 OE1 GLN 4 0.864 48.124 10.964 1.00 1.73 O ATOM 1578 N GLY 5 3.483 44.442 10.377 1.00 1.52 N ATOM 1579 CA GLY 5 4.146 43.500 9.507 1.00 1.52 C ATOM 1580 C GLY 5 4.636 44.101 8.203 1.00 1.52 C ATOM 1581 O GLY 5 4.864 45.307 8.118 1.00 1.52 O ATOM 1582 N PRO 6 4.761 43.260 7.165 1.00 1.39 N ATOM 1583 CA PRO 6 4.428 41.832 7.053 1.00 1.39 C ATOM 1584 C PRO 6 5.133 40.983 8.091 1.00 1.39 C ATOM 1585 O PRO 6 6.186 41.368 8.589 1.00 1.39 O ATOM 1586 CB PRO 6 4.884 41.500 5.639 1.00 1.39 C ATOM 1587 CG PRO 6 4.831 42.829 4.901 1.00 1.39 C ATOM 1588 CD PRO 6 5.251 43.852 5.931 1.00 1.39 C ATOM 1589 N TRP 7 4.503 39.873 8.486 1.00 1.28 N ATOM 1590 CA TRP 7 5.055 39.063 9.555 1.00 1.28 C ATOM 1591 C TRP 7 5.917 37.928 9.001 1.00 1.28 C ATOM 1592 O TRP 7 7.096 37.823 9.355 1.00 1.28 O ATOM 1593 CB TRP 7 3.911 38.473 10.423 1.00 1.28 C ATOM 1594 CG TRP 7 3.074 39.496 11.274 1.00 1.28 C ATOM 1595 CD1 TRP 7 3.394 40.782 11.544 1.00 1.28 C ATOM 1596 CD2 TRP 7 1.775 39.280 11.955 1.00 1.28 C ATOM 1597 CE2 TRP 7 1.432 40.477 12.565 1.00 1.28 C ATOM 1598 CE3 TRP 7 0.902 38.191 12.086 1.00 1.28 C ATOM 1599 NE1 TRP 7 2.404 41.372 12.308 1.00 1.28 N ATOM 1600 CZ2 TRP 7 0.254 40.629 13.287 1.00 1.28 C ATOM 1601 CZ3 TRP 7 -0.275 38.342 12.807 1.00 1.28 C ATOM 1602 CH2 TRP 7 -0.588 39.525 13.387 1.00 1.28 C ATOM 1603 N VAL 8 5.348 37.100 8.121 1.00 1.18 N ATOM 1604 CA VAL 8 6.090 35.939 7.598 1.00 1.18 C ATOM 1605 C VAL 8 6.054 35.776 6.092 1.00 1.18 C ATOM 1606 O VAL 8 5.401 36.541 5.375 1.00 1.18 O ATOM 1607 CB VAL 8 5.614 34.625 8.205 1.00 1.18 C ATOM 1608 CG1 VAL 8 5.805 34.660 9.691 1.00 1.18 C ATOM 1609 CG2 VAL 8 4.187 34.374 7.785 1.00 1.18 C ATOM 1610 N GLY 9 6.826 34.797 5.615 1.00 1.35 N ATOM 1611 CA GLY 9 6.815 34.412 4.216 1.00 1.35 C ATOM 1612 C GLY 9 6.160 33.036 3.992 1.00 1.35 C ATOM 1613 O GLY 9 5.515 32.457 4.891 1.00 1.35 O ATOM 1614 N SER 10 6.431 32.497 2.801 1.00 1.64 N ATOM 1615 CA SER 10 5.872 31.249 2.285 1.00 1.64 C ATOM 1616 C SER 10 6.183 30.004 3.101 1.00 1.64 C ATOM 1617 O SER 10 5.429 29.032 3.049 1.00 1.64 O ATOM 1618 CB SER 10 6.369 31.044 0.866 1.00 1.64 C ATOM 1619 OG SER 10 7.757 30.846 0.847 1.00 1.64 O ATOM 1620 N SER 11 7.213 30.062 3.949 1.00 2.05 N ATOM 1621 CA SER 11 7.598 28.908 4.759 1.00 2.05 C ATOM 1622 C SER 11 6.470 28.437 5.681 1.00 2.05 C ATOM 1623 O SER 11 6.469 27.282 6.109 1.00 2.05 O ATOM 1624 CB SER 11 8.822 29.245 5.592 1.00 2.05 C ATOM 1625 OG SER 11 8.521 30.225 6.538 1.00 2.05 O ATOM 1626 N TYR 12 5.502 29.312 5.974 1.00 2.56 N ATOM 1627 CA TYR 12 4.372 28.897 6.793 1.00 2.56 C ATOM 1628 C TYR 12 3.071 29.044 6.013 1.00 2.56 C ATOM 1629 O TYR 12 2.159 28.193 6.059 1.00 2.56 O ATOM 1630 CB TYR 12 4.256 29.762 8.047 1.00 2.56 C ATOM 1631 CG TYR 12 5.439 29.750 8.941 1.00 2.56 C ATOM 1632 CD1 TYR 12 6.230 30.865 8.990 1.00 2.56 C ATOM 1633 CD2 TYR 12 5.732 28.649 9.719 1.00 2.56 C ATOM 1634 CE1 TYR 12 7.332 30.903 9.813 1.00 2.56 C ATOM 1635 CE2 TYR 12 6.832 28.672 10.552 1.00 2.56 C ATOM 1636 CZ TYR 12 7.635 29.795 10.601 1.00 2.56 C ATOM 1637 OH TYR 12 8.734 29.822 11.429 1.00 2.56 O ATOM 1638 N VAL 13 2.979 30.107 5.238 1.00 3.04 N ATOM 1639 CA VAL 13 1.670 30.399 4.719 1.00 3.04 C ATOM 1640 C VAL 13 1.363 29.722 3.412 1.00 3.04 C ATOM 1641 O VAL 13 0.200 29.635 3.029 1.00 3.04 O ATOM 1642 CB VAL 13 1.509 31.886 4.641 1.00 3.04 C ATOM 1643 CG1 VAL 13 1.787 32.389 6.049 1.00 3.04 C ATOM 1644 CG2 VAL 13 2.411 32.466 3.600 1.00 3.04 C ATOM 1645 N ALA 14 2.374 29.135 2.769 1.00 3.29 N ATOM 1646 CA ALA 14 2.139 28.377 1.558 1.00 3.29 C ATOM 1647 C ALA 14 1.195 27.209 1.840 1.00 3.29 C ATOM 1648 O ALA 14 0.520 26.722 0.934 1.00 3.29 O ATOM 1649 CB ALA 14 3.441 27.856 0.991 1.00 3.29 C ATOM 1650 N GLU 15 1.194 26.714 3.089 1.00 3.30 N ATOM 1651 CA GLU 15 0.370 25.578 3.454 1.00 3.30 C ATOM 1652 C GLU 15 -0.887 25.990 4.223 1.00 3.30 C ATOM 1653 O GLU 15 -1.913 25.311 4.142 1.00 3.30 O ATOM 1654 CB GLU 15 1.188 24.588 4.293 1.00 3.30 C ATOM 1655 CG GLU 15 2.390 23.982 3.557 1.00 3.30 C ATOM 1656 CD GLU 15 3.185 22.998 4.400 1.00 3.30 C ATOM 1657 OE1 GLU 15 2.885 22.849 5.560 1.00 3.30 O ATOM 1658 OE2 GLU 15 4.097 22.401 3.873 1.00 3.30 O ATOM 1659 N THR 16 -0.811 27.096 4.979 1.00 3.19 N ATOM 1660 CA THR 16 -1.935 27.484 5.832 1.00 3.19 C ATOM 1661 C THR 16 -2.722 28.784 5.490 1.00 3.19 C ATOM 1662 O THR 16 -3.863 28.933 5.950 1.00 3.19 O ATOM 1663 CB THR 16 -1.431 27.500 7.285 1.00 3.19 C ATOM 1664 CG2 THR 16 -0.998 26.121 7.714 1.00 3.19 C ATOM 1665 OG1 THR 16 -0.329 28.388 7.401 1.00 3.19 O ATOM 1666 N GLY 17 -2.161 29.726 4.730 1.00 2.78 N ATOM 1667 CA GLY 17 -2.904 30.947 4.392 1.00 2.78 C ATOM 1668 C GLY 17 -3.459 31.714 5.600 1.00 2.78 C ATOM 1669 O GLY 17 -2.755 32.035 6.566 1.00 2.78 O ATOM 1670 N GLN 18 -4.775 31.945 5.545 1.00 2.25 N ATOM 1671 CA GLN 18 -5.525 32.667 6.576 1.00 2.25 C ATOM 1672 C GLN 18 -5.464 31.973 7.923 1.00 2.25 C ATOM 1673 O GLN 18 -5.610 32.619 8.969 1.00 2.25 O ATOM 1674 CB GLN 18 -6.994 32.823 6.178 1.00 2.25 C ATOM 1675 CG GLN 18 -7.266 33.767 5.003 1.00 2.25 C ATOM 1676 CD GLN 18 -6.921 35.230 5.299 1.00 2.25 C ATOM 1677 NE2 GLN 18 -7.489 35.777 6.377 1.00 2.25 N ATOM 1678 OE1 GLN 18 -6.147 35.847 4.565 1.00 2.25 O ATOM 1679 N ASN 19 -5.278 30.655 7.919 1.00 1.92 N ATOM 1680 CA ASN 19 -5.234 29.949 9.183 1.00 1.92 C ATOM 1681 C ASN 19 -3.987 30.374 9.930 1.00 1.92 C ATOM 1682 O ASN 19 -3.976 30.418 11.159 1.00 1.92 O ATOM 1683 CB ASN 19 -5.258 28.453 8.973 1.00 1.92 C ATOM 1684 CG ASN 19 -6.601 27.956 8.535 1.00 1.92 C ATOM 1685 ND2 ASN 19 -6.598 26.836 7.858 1.00 1.92 N ATOM 1686 OD1 ASN 19 -7.643 28.575 8.795 1.00 1.92 O ATOM 1687 N TRP 20 -2.924 30.701 9.187 1.00 1.55 N ATOM 1688 CA TRP 20 -1.710 31.128 9.835 1.00 1.55 C ATOM 1689 C TRP 20 -1.968 32.437 10.517 1.00 1.55 C ATOM 1690 O TRP 20 -1.621 32.616 11.675 1.00 1.55 O ATOM 1691 CB TRP 20 -0.548 31.318 8.880 1.00 1.55 C ATOM 1692 CG TRP 20 0.643 31.688 9.620 1.00 1.55 C ATOM 1693 CD1 TRP 20 1.499 30.838 10.240 1.00 1.55 C ATOM 1694 CD2 TRP 20 1.130 32.998 9.867 1.00 1.55 C ATOM 1695 CE2 TRP 20 2.256 32.857 10.676 1.00 1.55 C ATOM 1696 CE3 TRP 20 0.706 34.266 9.487 1.00 1.55 C ATOM 1697 NE1 TRP 20 2.467 31.537 10.881 1.00 1.55 N ATOM 1698 CZ2 TRP 20 2.939 33.922 11.131 1.00 1.55 C ATOM 1699 CZ3 TRP 20 1.407 35.336 9.935 1.00 1.55 C ATOM 1700 CH2 TRP 20 2.497 35.161 10.752 1.00 1.55 C ATOM 1701 N ALA 21 -2.597 33.361 9.789 1.00 1.27 N ATOM 1702 CA ALA 21 -2.862 34.685 10.352 1.00 1.27 C ATOM 1703 C ALA 21 -3.716 34.618 11.600 1.00 1.27 C ATOM 1704 O ALA 21 -3.476 35.346 12.568 1.00 1.27 O ATOM 1705 CB ALA 21 -3.569 35.552 9.355 1.00 1.27 C ATOM 1706 N SER 22 -4.715 33.736 11.596 1.00 1.20 N ATOM 1707 CA SER 22 -5.578 33.637 12.759 1.00 1.20 C ATOM 1708 C SER 22 -4.801 33.101 13.957 1.00 1.20 C ATOM 1709 O SER 22 -4.901 33.628 15.075 1.00 1.20 O ATOM 1710 CB SER 22 -6.749 32.728 12.447 1.00 1.20 C ATOM 1711 OG SER 22 -7.571 33.285 11.451 1.00 1.20 O ATOM 1712 N LEU 23 -4.004 32.058 13.725 1.00 1.29 N ATOM 1713 CA LEU 23 -3.249 31.470 14.813 1.00 1.29 C ATOM 1714 C LEU 23 -2.171 32.415 15.293 1.00 1.29 C ATOM 1715 O LEU 23 -1.998 32.600 16.496 1.00 1.29 O ATOM 1716 CB LEU 23 -2.615 30.163 14.343 1.00 1.29 C ATOM 1717 CG LEU 23 -3.600 29.026 14.065 1.00 1.29 C ATOM 1718 CD1 LEU 23 -2.863 27.877 13.403 1.00 1.29 C ATOM 1719 CD2 LEU 23 -4.240 28.592 15.372 1.00 1.29 C ATOM 1720 N ALA 24 -1.488 33.058 14.350 1.00 1.41 N ATOM 1721 CA ALA 24 -0.412 33.973 14.655 1.00 1.41 C ATOM 1722 C ALA 24 -0.906 35.158 15.439 1.00 1.41 C ATOM 1723 O ALA 24 -0.275 35.567 16.408 1.00 1.41 O ATOM 1724 CB ALA 24 0.235 34.445 13.377 1.00 1.41 C ATOM 1725 N ALA 25 -2.058 35.710 15.090 1.00 1.67 N ATOM 1726 CA ALA 25 -2.530 36.845 15.851 1.00 1.67 C ATOM 1727 C ALA 25 -2.717 36.459 17.317 1.00 1.67 C ATOM 1728 O ALA 25 -2.375 37.203 18.237 1.00 1.67 O ATOM 1729 CB ALA 25 -3.800 37.401 15.271 1.00 1.67 C ATOM 1730 N ASN 26 -3.215 35.237 17.549 1.00 2.00 N ATOM 1731 CA ASN 26 -3.398 34.805 18.924 1.00 2.00 C ATOM 1732 C ASN 26 -2.055 34.501 19.606 1.00 2.00 C ATOM 1733 O ASN 26 -1.785 34.993 20.705 1.00 2.00 O ATOM 1734 CB ASN 26 -4.315 33.602 18.949 1.00 2.00 C ATOM 1735 CG ASN 26 -5.748 33.972 18.656 1.00 2.00 C ATOM 1736 ND2 ASN 26 -6.509 33.010 18.207 1.00 2.00 N ATOM 1737 OD1 ASN 26 -6.168 35.125 18.824 1.00 2.00 O ATOM 1738 N GLU 27 -1.178 33.760 18.925 1.00 2.28 N ATOM 1739 CA GLU 27 0.121 33.362 19.484 1.00 2.28 C ATOM 1740 C GLU 27 1.015 34.555 19.787 1.00 2.28 C ATOM 1741 O GLU 27 1.719 34.587 20.806 1.00 2.28 O ATOM 1742 CB GLU 27 0.866 32.434 18.515 1.00 2.28 C ATOM 1743 CG GLU 27 0.275 31.032 18.366 1.00 2.28 C ATOM 1744 CD GLU 27 0.998 30.191 17.326 1.00 2.28 C ATOM 1745 OE1 GLU 27 1.857 30.711 16.649 1.00 2.28 O ATOM 1746 OE2 GLU 27 0.690 29.027 17.219 1.00 2.28 O ATOM 1747 N LEU 28 0.954 35.558 18.924 1.00 2.35 N ATOM 1748 CA LEU 28 1.763 36.754 19.032 1.00 2.35 C ATOM 1749 C LEU 28 1.127 37.786 19.961 1.00 2.35 C ATOM 1750 O LEU 28 1.694 38.858 20.186 1.00 2.35 O ATOM 1751 CB LEU 28 1.943 37.351 17.636 1.00 2.35 C ATOM 1752 CG LEU 28 2.674 36.463 16.620 1.00 2.35 C ATOM 1753 CD1 LEU 28 2.650 37.128 15.232 1.00 2.35 C ATOM 1754 CD2 LEU 28 4.068 36.229 17.091 1.00 2.35 C ATOM 1755 N ARG 29 -0.059 37.465 20.501 1.00 2.49 N ATOM 1756 CA ARG 29 -0.812 38.332 21.397 1.00 2.49 C ATOM 1757 C ARG 29 -1.059 39.720 20.814 1.00 2.49 C ATOM 1758 O ARG 29 -0.827 40.731 21.487 1.00 2.49 O ATOM 1759 CB ARG 29 -0.089 38.454 22.735 1.00 2.49 C ATOM 1760 CG ARG 29 -0.354 37.312 23.730 1.00 2.49 C ATOM 1761 CD ARG 29 0.327 36.015 23.345 1.00 2.49 C ATOM 1762 NE ARG 29 0.157 35.000 24.390 1.00 2.49 N ATOM 1763 CZ ARG 29 0.573 33.706 24.333 1.00 2.49 C ATOM 1764 NH1 ARG 29 1.199 33.222 23.277 1.00 2.49 N ATOM 1765 NH2 ARG 29 0.345 32.908 25.367 1.00 2.49 N ATOM 1766 N VAL 30 -1.524 39.779 19.564 1.00 2.49 N ATOM 1767 CA VAL 30 -1.746 41.054 18.895 1.00 2.49 C ATOM 1768 C VAL 30 -3.148 41.343 18.391 1.00 2.49 C ATOM 1769 O VAL 30 -3.788 40.516 17.734 1.00 2.49 O ATOM 1770 CB VAL 30 -0.756 41.153 17.734 1.00 2.49 C ATOM 1771 CG1 VAL 30 -0.882 39.959 16.886 1.00 2.49 C ATOM 1772 CG2 VAL 30 -1.049 42.376 16.870 1.00 2.49 C ATOM 1773 N THR 31 -3.592 42.564 18.670 1.00 2.44 N ATOM 1774 CA THR 31 -4.866 43.059 18.191 1.00 2.44 C ATOM 1775 C THR 31 -4.609 44.176 17.193 1.00 2.44 C ATOM 1776 O THR 31 -3.901 45.140 17.494 1.00 2.44 O ATOM 1777 CB THR 31 -5.758 43.566 19.339 1.00 2.44 C ATOM 1778 CG2 THR 31 -7.071 44.102 18.793 1.00 2.44 C ATOM 1779 OG1 THR 31 -6.020 42.494 20.253 1.00 2.44 O ATOM 1780 N GLU 32 -5.174 44.014 16.015 1.00 2.34 N ATOM 1781 CA GLU 32 -5.066 44.920 14.876 1.00 2.34 C ATOM 1782 C GLU 32 -6.244 44.636 13.957 1.00 2.34 C ATOM 1783 O GLU 32 -6.879 43.589 14.058 1.00 2.34 O ATOM 1784 CB GLU 32 -3.690 44.776 14.175 1.00 2.34 C ATOM 1785 CG GLU 32 -3.435 45.693 12.911 1.00 2.34 C ATOM 1786 CD GLU 32 -3.597 47.210 13.136 1.00 2.34 C ATOM 1787 OE1 GLU 32 -4.727 47.652 13.176 1.00 2.34 O ATOM 1788 OE2 GLU 32 -2.614 47.920 13.198 1.00 2.34 O ATOM 1789 N ARG 33 -6.565 45.567 13.077 1.00 2.23 N ATOM 1790 CA ARG 33 -7.653 45.336 12.148 1.00 2.23 C ATOM 1791 C ARG 33 -7.346 44.068 11.316 1.00 2.23 C ATOM 1792 O ARG 33 -6.237 43.956 10.773 1.00 2.23 O ATOM 1793 CB ARG 33 -7.814 46.539 11.236 1.00 2.23 C ATOM 1794 CG ARG 33 -8.272 47.817 11.926 1.00 2.23 C ATOM 1795 CD ARG 33 -8.368 48.969 10.967 1.00 2.23 C ATOM 1796 NE ARG 33 -8.830 50.196 11.618 1.00 2.23 N ATOM 1797 CZ ARG 33 -8.032 51.063 12.282 1.00 2.23 C ATOM 1798 NH1 ARG 33 -6.739 50.839 12.371 1.00 2.23 N ATOM 1799 NH2 ARG 33 -8.553 52.141 12.843 1.00 2.23 N ATOM 1800 N PRO 34 -8.320 43.139 11.143 1.00 2.04 N ATOM 1801 CA PRO 34 -8.238 41.892 10.381 1.00 2.04 C ATOM 1802 C PRO 34 -7.629 42.030 8.995 1.00 2.04 C ATOM 1803 O PRO 34 -6.954 41.120 8.516 1.00 2.04 O ATOM 1804 CB PRO 34 -9.700 41.459 10.304 1.00 2.04 C ATOM 1805 CG PRO 34 -10.311 42.002 11.567 1.00 2.04 C ATOM 1806 CD PRO 34 -9.643 43.330 11.792 1.00 2.04 C ATOM 1807 N PHE 35 -7.871 43.168 8.327 1.00 1.91 N ATOM 1808 CA PHE 35 -7.272 43.370 7.014 1.00 1.91 C ATOM 1809 C PHE 35 -5.759 43.287 7.095 1.00 1.91 C ATOM 1810 O PHE 35 -5.111 42.688 6.228 1.00 1.91 O ATOM 1811 CB PHE 35 -7.653 44.675 6.328 1.00 1.91 C ATOM 1812 CG PHE 35 -6.827 44.794 5.073 1.00 1.91 C ATOM 1813 CD1 PHE 35 -7.155 44.143 3.906 1.00 1.91 C ATOM 1814 CD2 PHE 35 -5.667 45.497 5.110 1.00 1.91 C ATOM 1815 CE1 PHE 35 -6.303 44.215 2.826 1.00 1.91 C ATOM 1816 CE2 PHE 35 -4.827 45.583 4.073 1.00 1.91 C ATOM 1817 CZ PHE 35 -5.131 44.939 2.920 1.00 1.91 C ATOM 1818 N TRP 36 -5.171 43.981 8.073 1.00 1.87 N ATOM 1819 CA TRP 36 -3.724 44.040 8.145 1.00 1.87 C ATOM 1820 C TRP 36 -3.205 42.742 8.709 1.00 1.87 C ATOM 1821 O TRP 36 -2.181 42.234 8.257 1.00 1.87 O ATOM 1822 CB TRP 36 -3.273 45.267 8.938 1.00 1.87 C ATOM 1823 CG TRP 36 -3.301 46.517 8.093 1.00 1.87 C ATOM 1824 CD1 TRP 36 -2.248 47.031 7.400 1.00 1.87 C ATOM 1825 CD2 TRP 36 -4.429 47.381 7.798 1.00 1.87 C ATOM 1826 CE2 TRP 36 -3.970 48.361 6.921 1.00 1.87 C ATOM 1827 CE3 TRP 36 -5.768 47.382 8.176 1.00 1.87 C ATOM 1828 NE1 TRP 36 -2.636 48.141 6.703 1.00 1.87 N ATOM 1829 CZ2 TRP 36 -4.806 49.329 6.407 1.00 1.87 C ATOM 1830 CZ3 TRP 36 -6.616 48.360 7.655 1.00 1.87 C ATOM 1831 CH2 TRP 36 -6.145 49.303 6.793 1.00 1.87 C ATOM 1832 N ILE 37 -3.950 42.125 9.611 1.00 2.00 N ATOM 1833 CA ILE 37 -3.505 40.836 10.118 1.00 2.00 C ATOM 1834 C ILE 37 -3.422 39.826 8.970 1.00 2.00 C ATOM 1835 O ILE 37 -2.458 39.072 8.848 1.00 2.00 O ATOM 1836 CB ILE 37 -4.377 40.346 11.276 1.00 2.00 C ATOM 1837 CG1 ILE 37 -4.157 41.245 12.486 1.00 2.00 C ATOM 1838 CG2 ILE 37 -4.122 38.910 11.572 1.00 2.00 C ATOM 1839 CD1 ILE 37 -5.129 41.032 13.610 1.00 2.00 C ATOM 1840 N SER 38 -4.448 39.825 8.112 1.00 2.02 N ATOM 1841 CA SER 38 -4.471 38.964 6.938 1.00 2.02 C ATOM 1842 C SER 38 -3.374 39.365 5.939 1.00 2.02 C ATOM 1843 O SER 38 -2.679 38.525 5.385 1.00 2.02 O ATOM 1844 CB SER 38 -5.820 39.071 6.263 1.00 2.02 C ATOM 1845 OG SER 38 -6.838 38.592 7.102 1.00 2.02 O ATOM 1846 N SER 39 -3.156 40.652 5.735 1.00 2.02 N ATOM 1847 CA SER 39 -2.128 41.076 4.793 1.00 2.02 C ATOM 1848 C SER 39 -0.749 40.571 5.201 1.00 2.02 C ATOM 1849 O SER 39 0.045 40.126 4.362 1.00 2.02 O ATOM 1850 CB SER 39 -2.105 42.574 4.716 1.00 2.02 C ATOM 1851 OG SER 39 -3.288 43.033 4.174 1.00 2.02 O ATOM 1852 N PHE 40 -0.505 40.569 6.512 1.00 2.16 N ATOM 1853 CA PHE 40 0.771 40.197 7.089 1.00 2.16 C ATOM 1854 C PHE 40 1.123 38.701 6.950 1.00 2.16 C ATOM 1855 O PHE 40 2.233 38.284 7.323 1.00 2.16 O ATOM 1856 CB PHE 40 0.800 40.627 8.553 1.00 2.16 C ATOM 1857 CG PHE 40 0.734 42.158 8.750 1.00 2.16 C ATOM 1858 CD1 PHE 40 1.054 43.054 7.727 1.00 2.16 C ATOM 1859 CD2 PHE 40 0.331 42.691 9.967 1.00 2.16 C ATOM 1860 CE1 PHE 40 0.974 44.421 7.930 1.00 2.16 C ATOM 1861 CE2 PHE 40 0.249 44.049 10.172 1.00 2.16 C ATOM 1862 CZ PHE 40 0.571 44.922 9.153 1.00 2.16 C ATOM 1863 N ILE 41 0.200 37.927 6.339 1.00 2.44 N ATOM 1864 CA ILE 41 0.390 36.521 6.002 1.00 2.44 C ATOM 1865 C ILE 41 1.574 36.362 5.086 1.00 2.44 C ATOM 1866 O ILE 41 2.330 35.412 5.214 1.00 2.44 O ATOM 1867 CB ILE 41 -0.846 35.945 5.271 1.00 2.44 C ATOM 1868 CG1 ILE 41 -1.936 35.817 6.178 1.00 2.44 C ATOM 1869 CG2 ILE 41 -0.588 34.651 4.688 1.00 2.44 C ATOM 1870 CD1 ILE 41 -3.253 35.525 5.515 1.00 2.44 C ATOM 1871 N GLY 42 1.741 37.243 4.124 1.00 2.72 N ATOM 1872 CA GLY 42 2.889 37.014 3.283 1.00 2.72 C ATOM 1873 C GLY 42 3.549 38.275 2.815 1.00 2.72 C ATOM 1874 O GLY 42 2.976 39.090 2.096 1.00 2.72 O ATOM 1875 N ARG 43 4.830 38.358 3.132 1.00 2.94 N ATOM 1876 CA ARG 43 5.667 39.477 2.742 1.00 2.94 C ATOM 1877 C ARG 43 5.684 39.622 1.231 1.00 2.94 C ATOM 1878 O ARG 43 5.719 40.725 0.710 1.00 2.94 O ATOM 1879 CB ARG 43 7.067 39.319 3.319 1.00 2.94 C ATOM 1880 CG ARG 43 7.959 40.535 3.153 1.00 2.94 C ATOM 1881 CD ARG 43 9.265 40.385 3.843 1.00 2.94 C ATOM 1882 NE ARG 43 9.108 40.233 5.295 1.00 2.94 N ATOM 1883 CZ ARG 43 8.924 41.250 6.170 1.00 2.94 C ATOM 1884 NH1 ARG 43 8.857 42.489 5.739 1.00 2.94 N ATOM 1885 NH2 ARG 43 8.815 40.997 7.461 1.00 2.94 N ATOM 1886 N SER 44 5.630 38.491 0.540 1.00 3.06 N ATOM 1887 CA SER 44 5.666 38.430 -0.915 1.00 3.06 C ATOM 1888 C SER 44 4.275 38.464 -1.569 1.00 3.06 C ATOM 1889 O SER 44 4.149 38.150 -2.757 1.00 3.06 O ATOM 1890 CB SER 44 6.410 37.187 -1.361 1.00 3.06 C ATOM 1891 OG SER 44 5.741 36.021 -0.961 1.00 3.06 O ATOM 1892 N LYS 45 3.222 38.790 -0.805 1.00 2.87 N ATOM 1893 CA LYS 45 1.869 38.891 -1.364 1.00 2.87 C ATOM 1894 C LYS 45 1.480 40.364 -1.605 1.00 2.87 C ATOM 1895 O LYS 45 2.010 41.273 -0.968 1.00 2.87 O ATOM 1896 CB LYS 45 0.868 38.201 -0.438 1.00 2.87 C ATOM 1897 CG LYS 45 1.105 36.689 -0.302 1.00 2.87 C ATOM 1898 CD LYS 45 0.078 36.019 0.615 1.00 2.87 C ATOM 1899 CE LYS 45 0.385 34.526 0.799 1.00 2.87 C ATOM 1900 NZ LYS 45 0.287 33.767 -0.494 1.00 2.87 N TER END