####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS366_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.87 8.07 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.85 9.11 LCS_AVERAGE: 34.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.96 8.17 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 3 3 3 6 6 8 11 12 13 15 17 17 20 25 26 28 31 33 38 38 LCS_GDT V 3 V 3 3 7 38 3 3 4 6 8 9 12 16 18 21 25 29 30 35 36 36 37 38 38 39 LCS_GDT Q 4 Q 4 5 7 38 3 4 5 6 8 9 13 16 23 25 27 29 33 35 36 36 37 38 38 39 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 15 19 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 6 P 6 5 13 38 3 4 5 5 8 12 18 23 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 7 W 7 12 17 38 3 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 8 V 8 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 9 G 9 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 10 S 10 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 11 S 11 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Y 12 Y 12 12 17 38 6 11 12 13 16 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 13 V 13 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 14 A 14 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 15 E 15 12 17 38 3 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 16 T 16 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 17 G 17 12 17 38 6 11 12 13 15 17 20 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Q 18 Q 18 12 17 38 3 3 12 13 14 17 19 23 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 27 E 27 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 28 L 28 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 30 V 30 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 31 T 31 13 19 38 3 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 32 E 32 6 19 38 4 6 6 10 13 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 33 R 33 6 19 38 4 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 34 P 34 6 19 38 4 7 8 13 17 18 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT F 35 F 35 6 19 38 4 6 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 18 20 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 16 18 21 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 14 20 22 24 27 29 30 31 34 36 36 37 38 38 39 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 12 17 21 23 27 29 30 30 31 32 36 37 38 38 39 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 12 14 20 23 27 29 30 30 31 32 34 37 38 38 39 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 12 14 18 20 24 27 28 30 30 31 31 32 32 33 39 LCS_GDT G 42 G 42 4 9 34 3 4 4 6 9 10 12 13 17 18 22 24 27 28 31 31 32 32 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 10 12 13 17 18 20 24 25 27 30 31 32 32 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 4 9 10 12 13 15 15 17 20 23 26 27 29 32 32 33 33 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 7 7 8 10 12 13 14 15 19 20 21 22 25 27 27 LCS_AVERAGE LCS_A: 46.59 ( 20.87 34.56 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 40.91 47.73 54.55 59.09 65.91 70.45 75.00 75.00 79.55 81.82 81.82 84.09 86.36 86.36 88.64 GDT RMS_LOCAL 0.28 0.55 0.55 1.34 1.46 1.60 2.32 2.62 2.85 3.40 3.64 3.83 3.83 4.19 4.41 4.41 4.66 4.87 4.87 5.26 GDT RMS_ALL_AT 7.98 8.02 8.02 8.97 9.34 9.16 7.99 8.20 8.19 8.69 8.61 8.47 8.47 8.46 8.31 8.31 8.18 8.07 8.07 7.93 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.759 0 0.640 0.604 17.359 0.000 0.000 - LGA V 3 V 3 11.008 0 0.123 1.071 12.151 0.000 0.000 8.337 LGA Q 4 Q 4 12.387 0 0.674 1.014 15.542 0.000 0.000 15.542 LGA G 5 G 5 10.497 0 0.037 0.037 10.989 0.000 0.000 - LGA P 6 P 6 9.050 0 0.087 0.424 12.279 0.000 0.000 11.735 LGA W 7 W 7 9.921 0 0.433 1.225 21.130 0.000 0.000 21.130 LGA V 8 V 8 8.646 0 0.123 0.176 9.685 0.000 0.000 8.609 LGA G 9 G 9 7.837 0 0.063 0.063 8.495 0.000 0.000 - LGA S 10 S 10 7.652 0 0.096 0.592 9.270 0.000 0.000 9.025 LGA S 11 S 11 4.762 0 0.014 0.682 6.031 14.545 10.000 4.692 LGA Y 12 Y 12 2.880 0 0.120 1.100 7.916 31.818 12.727 7.916 LGA V 13 V 13 3.425 0 0.062 1.007 7.520 13.182 10.390 7.520 LGA A 14 A 14 4.371 0 0.024 0.025 5.040 6.818 6.545 - LGA E 15 E 15 3.170 0 0.060 1.125 5.310 15.455 14.545 3.521 LGA T 16 T 16 4.092 0 0.106 1.149 6.014 5.909 12.208 2.233 LGA G 17 G 17 6.226 0 0.713 0.713 6.226 0.000 0.000 - LGA Q 18 Q 18 5.468 0 0.023 1.314 12.252 16.364 7.273 12.107 LGA N 19 N 19 1.737 0 0.658 1.526 7.770 47.727 24.545 7.770 LGA W 20 W 20 1.497 0 0.075 1.027 6.881 54.545 39.870 6.080 LGA A 21 A 21 2.425 0 0.043 0.048 3.014 38.182 34.182 - LGA S 22 S 22 2.250 0 0.104 0.141 2.400 41.364 40.303 2.374 LGA L 23 L 23 0.900 0 0.077 0.106 1.752 69.545 72.045 1.181 LGA A 24 A 24 1.586 0 0.028 0.029 1.997 54.545 53.818 - LGA A 25 A 25 2.242 0 0.021 0.024 2.502 38.182 36.000 - LGA N 26 N 26 1.600 0 0.062 0.091 2.298 58.182 52.955 2.298 LGA E 27 E 27 1.135 0 0.072 0.990 3.405 65.455 52.525 3.405 LGA L 28 L 28 1.153 0 0.074 0.141 1.622 65.455 63.636 1.622 LGA R 29 R 29 1.162 0 0.079 1.403 8.324 65.455 38.182 8.324 LGA V 30 V 30 1.326 0 0.252 1.158 3.602 65.909 51.948 3.602 LGA T 31 T 31 1.404 0 0.696 0.676 4.408 52.273 34.026 4.403 LGA E 32 E 32 3.843 0 0.589 1.259 11.030 25.909 11.515 11.030 LGA R 33 R 33 2.511 0 0.066 1.344 12.069 22.727 9.256 12.069 LGA P 34 P 34 3.667 0 0.085 0.393 6.696 13.636 8.052 6.696 LGA F 35 F 35 2.508 0 0.098 1.230 3.433 32.727 29.752 3.059 LGA W 36 W 36 3.753 0 0.652 1.274 14.435 14.545 4.156 14.162 LGA I 37 I 37 3.017 0 0.072 0.951 5.714 12.727 14.545 2.981 LGA S 38 S 38 6.765 0 0.119 0.654 9.018 0.455 0.303 8.142 LGA S 39 S 39 7.411 0 0.181 0.720 10.556 0.000 0.000 6.814 LGA F 40 F 40 7.844 0 0.119 1.085 11.079 0.000 0.000 9.535 LGA I 41 I 41 11.838 0 0.565 0.573 15.008 0.000 0.000 11.955 LGA G 42 G 42 16.497 0 0.150 0.150 19.214 0.000 0.000 - LGA R 43 R 43 16.486 0 0.650 1.300 17.097 0.000 0.000 16.600 LGA S 44 S 44 18.590 0 0.714 0.810 21.643 0.000 0.000 17.316 LGA K 45 K 45 22.457 0 0.149 0.350 25.050 0.000 0.000 20.951 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.589 7.767 8.625 21.446 16.939 9.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.62 49.432 46.887 0.882 LGA_LOCAL RMSD: 2.620 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.203 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.589 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.783023 * X + 0.606019 * Y + -0.140055 * Z + 20.577921 Y_new = -0.390806 * X + -0.304175 * Y + 0.868762 * Z + -3.665798 Z_new = 0.483886 * X + 0.734995 * Y + 0.475012 * Z + -90.652153 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.678666 -0.505089 0.997041 [DEG: -153.4762 -28.9395 57.1263 ] ZXZ: -2.981756 1.075818 0.582224 [DEG: -170.8420 61.6399 33.3590 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS366_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.62 46.887 7.59 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS366_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 1557 N ALA 2 -2.403 45.511 12.338 1.00 3.37 N ATOM 1558 CA ALA 2 -2.718 44.780 13.557 1.00 3.37 C ATOM 1559 C ALA 2 -1.439 44.477 14.320 1.00 3.37 C ATOM 1560 O ALA 2 -1.426 44.388 15.553 1.00 3.37 O ATOM 1561 CB ALA 2 -3.404 43.477 13.239 1.00 3.37 C ATOM 1562 N VAL 3 -0.375 44.309 13.533 1.00 3.27 N ATOM 1563 CA VAL 3 0.976 43.959 13.922 1.00 3.27 C ATOM 1564 C VAL 3 1.924 45.152 13.746 1.00 3.27 C ATOM 1565 O VAL 3 1.588 46.152 13.090 1.00 3.27 O ATOM 1566 CB VAL 3 1.500 42.842 13.000 1.00 3.27 C ATOM 1567 CG1 VAL 3 0.696 41.581 13.085 1.00 3.27 C ATOM 1568 CG2 VAL 3 1.424 43.340 11.574 1.00 3.27 C ATOM 1569 N GLN 4 3.134 45.030 14.308 1.00 3.15 N ATOM 1570 CA GLN 4 4.173 46.066 14.198 1.00 3.15 C ATOM 1571 C GLN 4 4.543 46.332 12.732 1.00 3.15 C ATOM 1572 O GLN 4 5.040 47.400 12.380 1.00 3.15 O ATOM 1573 CB GLN 4 5.413 45.645 14.978 1.00 3.15 C ATOM 1574 CG GLN 4 5.187 45.478 16.472 1.00 3.15 C ATOM 1575 CD GLN 4 4.576 44.102 16.826 1.00 3.15 C ATOM 1576 NE2 GLN 4 4.967 43.557 17.973 1.00 3.15 N ATOM 1577 OE1 GLN 4 3.772 43.543 16.076 1.00 3.15 O ATOM 1578 N GLY 5 4.300 45.338 11.885 1.00 2.72 N ATOM 1579 CA GLY 5 4.527 45.426 10.457 1.00 2.72 C ATOM 1580 C GLY 5 4.423 44.051 9.778 1.00 2.72 C ATOM 1581 O GLY 5 4.436 43.013 10.449 1.00 2.72 O ATOM 1582 N PRO 6 4.373 44.007 8.436 1.00 2.22 N ATOM 1583 CA PRO 6 4.326 42.803 7.617 1.00 2.22 C ATOM 1584 C PRO 6 5.436 41.827 7.996 1.00 2.22 C ATOM 1585 O PRO 6 5.263 40.615 7.859 1.00 2.22 O ATOM 1586 CB PRO 6 4.561 43.366 6.213 1.00 2.22 C ATOM 1587 CG PRO 6 3.958 44.753 6.276 1.00 2.22 C ATOM 1588 CD PRO 6 4.313 45.263 7.656 1.00 2.22 C ATOM 1589 N TRP 7 6.573 42.351 8.470 1.00 1.93 N ATOM 1590 CA TRP 7 7.710 41.544 8.899 1.00 1.93 C ATOM 1591 C TRP 7 7.379 40.626 10.079 1.00 1.93 C ATOM 1592 O TRP 7 7.978 39.553 10.239 1.00 1.93 O ATOM 1593 CB TRP 7 8.879 42.460 9.271 1.00 1.93 C ATOM 1594 CG TRP 7 8.614 43.361 10.455 1.00 1.93 C ATOM 1595 CD1 TRP 7 8.137 44.635 10.407 1.00 1.93 C ATOM 1596 CD2 TRP 7 8.820 43.065 11.858 1.00 1.93 C ATOM 1597 CE2 TRP 7 8.456 44.207 12.575 1.00 1.93 C ATOM 1598 CE3 TRP 7 9.284 41.938 12.553 1.00 1.93 C ATOM 1599 NE1 TRP 7 8.042 45.157 11.677 1.00 1.93 N ATOM 1600 CZ2 TRP 7 8.539 44.261 13.956 1.00 1.93 C ATOM 1601 CZ3 TRP 7 9.358 41.989 13.936 1.00 1.93 C ATOM 1602 CH2 TRP 7 8.996 43.126 14.620 1.00 1.93 C ATOM 1603 N VAL 8 6.392 41.029 10.887 1.00 1.71 N ATOM 1604 CA VAL 8 5.980 40.256 12.047 1.00 1.71 C ATOM 1605 C VAL 8 5.281 39.052 11.510 1.00 1.71 C ATOM 1606 O VAL 8 5.537 37.904 11.889 1.00 1.71 O ATOM 1607 CB VAL 8 4.958 41.033 12.888 1.00 1.71 C ATOM 1608 CG1 VAL 8 4.438 40.175 14.013 1.00 1.71 C ATOM 1609 CG2 VAL 8 5.552 42.274 13.393 1.00 1.71 C ATOM 1610 N GLY 9 4.394 39.359 10.580 1.00 1.63 N ATOM 1611 CA GLY 9 3.582 38.377 9.903 1.00 1.63 C ATOM 1612 C GLY 9 4.417 37.374 9.140 1.00 1.63 C ATOM 1613 O GLY 9 4.245 36.161 9.284 1.00 1.63 O ATOM 1614 N SER 10 5.341 37.901 8.338 1.00 1.70 N ATOM 1615 CA SER 10 6.215 37.105 7.501 1.00 1.70 C ATOM 1616 C SER 10 7.054 36.163 8.348 1.00 1.70 C ATOM 1617 O SER 10 7.210 34.986 8.013 1.00 1.70 O ATOM 1618 CB SER 10 7.131 38.029 6.723 1.00 1.70 C ATOM 1619 OG SER 10 6.400 38.844 5.841 1.00 1.70 O ATOM 1620 N SER 11 7.563 36.653 9.479 1.00 1.89 N ATOM 1621 CA SER 11 8.356 35.804 10.342 1.00 1.89 C ATOM 1622 C SER 11 7.487 34.690 10.928 1.00 1.89 C ATOM 1623 O SER 11 7.878 33.516 10.954 1.00 1.89 O ATOM 1624 CB SER 11 8.937 36.631 11.474 1.00 1.89 C ATOM 1625 OG SER 11 9.823 37.608 10.987 1.00 1.89 O ATOM 1626 N TYR 12 6.270 35.045 11.351 1.00 2.06 N ATOM 1627 CA TYR 12 5.368 34.081 11.957 1.00 2.06 C ATOM 1628 C TYR 12 5.107 32.916 11.032 1.00 2.06 C ATOM 1629 O TYR 12 5.319 31.755 11.403 1.00 2.06 O ATOM 1630 CB TYR 12 4.034 34.747 12.302 1.00 2.06 C ATOM 1631 CG TYR 12 3.022 33.824 12.923 1.00 2.06 C ATOM 1632 CD1 TYR 12 3.127 33.506 14.258 1.00 2.06 C ATOM 1633 CD2 TYR 12 1.993 33.297 12.170 1.00 2.06 C ATOM 1634 CE1 TYR 12 2.220 32.685 14.843 1.00 2.06 C ATOM 1635 CE2 TYR 12 1.083 32.461 12.769 1.00 2.06 C ATOM 1636 CZ TYR 12 1.195 32.153 14.103 1.00 2.06 C ATOM 1637 OH TYR 12 0.281 31.306 14.704 1.00 2.06 O ATOM 1638 N VAL 13 4.676 33.237 9.819 1.00 2.43 N ATOM 1639 CA VAL 13 4.335 32.235 8.825 1.00 2.43 C ATOM 1640 C VAL 13 5.547 31.452 8.337 1.00 2.43 C ATOM 1641 O VAL 13 5.451 30.248 8.092 1.00 2.43 O ATOM 1642 CB VAL 13 3.571 32.913 7.683 1.00 2.43 C ATOM 1643 CG1 VAL 13 4.437 33.774 6.927 1.00 2.43 C ATOM 1644 CG2 VAL 13 2.935 31.879 6.779 1.00 2.43 C ATOM 1645 N ALA 14 6.720 32.093 8.276 1.00 2.92 N ATOM 1646 CA ALA 14 7.927 31.400 7.845 1.00 2.92 C ATOM 1647 C ALA 14 8.227 30.201 8.741 1.00 2.92 C ATOM 1648 O ALA 14 8.682 29.162 8.254 1.00 2.92 O ATOM 1649 CB ALA 14 9.107 32.357 7.855 1.00 2.92 C ATOM 1650 N GLU 15 7.959 30.333 10.043 1.00 2.92 N ATOM 1651 CA GLU 15 8.190 29.223 10.968 1.00 2.92 C ATOM 1652 C GLU 15 6.925 28.382 11.231 1.00 2.92 C ATOM 1653 O GLU 15 7.020 27.194 11.548 1.00 2.92 O ATOM 1654 CB GLU 15 8.754 29.731 12.298 1.00 2.92 C ATOM 1655 CG GLU 15 10.124 30.404 12.198 1.00 2.92 C ATOM 1656 CD GLU 15 10.683 30.846 13.545 1.00 2.92 C ATOM 1657 OE1 GLU 15 9.991 30.724 14.532 1.00 2.92 O ATOM 1658 OE2 GLU 15 11.807 31.292 13.579 1.00 2.92 O ATOM 1659 N THR 16 5.749 29.008 11.112 1.00 2.75 N ATOM 1660 CA THR 16 4.462 28.381 11.419 1.00 2.75 C ATOM 1661 C THR 16 3.837 27.568 10.288 1.00 2.75 C ATOM 1662 O THR 16 3.235 26.522 10.538 1.00 2.75 O ATOM 1663 CB THR 16 3.433 29.441 11.839 1.00 2.75 C ATOM 1664 CG2 THR 16 2.107 28.783 12.191 1.00 2.75 C ATOM 1665 OG1 THR 16 3.930 30.149 12.967 1.00 2.75 O ATOM 1666 N GLY 17 3.915 28.066 9.058 1.00 2.40 N ATOM 1667 CA GLY 17 3.201 27.437 7.967 1.00 2.40 C ATOM 1668 C GLY 17 1.766 27.933 8.008 1.00 2.40 C ATOM 1669 O GLY 17 1.507 29.012 8.554 1.00 2.40 O ATOM 1670 N GLN 18 0.845 27.173 7.420 1.00 1.92 N ATOM 1671 CA GLN 18 -0.541 27.614 7.332 1.00 1.92 C ATOM 1672 C GLN 18 -1.144 27.766 8.723 1.00 1.92 C ATOM 1673 O GLN 18 -0.860 26.986 9.635 1.00 1.92 O ATOM 1674 CB GLN 18 -1.359 26.637 6.483 1.00 1.92 C ATOM 1675 CG GLN 18 -0.971 26.644 5.011 1.00 1.92 C ATOM 1676 CD GLN 18 -1.750 25.637 4.150 1.00 1.92 C ATOM 1677 NE2 GLN 18 -2.842 25.092 4.674 1.00 1.92 N ATOM 1678 OE1 GLN 18 -1.340 25.366 3.003 1.00 1.92 O ATOM 1679 N ASN 19 -1.962 28.800 8.871 1.00 1.60 N ATOM 1680 CA ASN 19 -2.610 29.124 10.132 1.00 1.60 C ATOM 1681 C ASN 19 -3.849 29.955 9.873 1.00 1.60 C ATOM 1682 O ASN 19 -3.912 30.644 8.862 1.00 1.60 O ATOM 1683 CB ASN 19 -1.634 29.918 10.961 1.00 1.60 C ATOM 1684 CG ASN 19 -1.308 31.233 10.257 1.00 1.60 C ATOM 1685 ND2 ASN 19 -0.290 31.242 9.420 1.00 1.60 N ATOM 1686 OD1 ASN 19 -1.993 32.237 10.457 1.00 1.60 O ATOM 1687 N TRP 20 -4.801 29.980 10.794 1.00 1.28 N ATOM 1688 CA TRP 20 -5.928 30.887 10.603 1.00 1.28 C ATOM 1689 C TRP 20 -5.526 32.258 11.102 1.00 1.28 C ATOM 1690 O TRP 20 -4.796 32.372 12.091 1.00 1.28 O ATOM 1691 CB TRP 20 -7.174 30.431 11.328 1.00 1.28 C ATOM 1692 CG TRP 20 -7.736 29.191 10.784 1.00 1.28 C ATOM 1693 CD1 TRP 20 -7.608 28.712 9.514 1.00 1.28 C ATOM 1694 CD2 TRP 20 -8.520 28.230 11.503 1.00 1.28 C ATOM 1695 CE2 TRP 20 -8.830 27.207 10.608 1.00 1.28 C ATOM 1696 CE3 TRP 20 -8.976 28.152 12.823 1.00 1.28 C ATOM 1697 NE1 TRP 20 -8.266 27.519 9.398 1.00 1.28 N ATOM 1698 CZ2 TRP 20 -9.581 26.111 10.988 1.00 1.28 C ATOM 1699 CZ3 TRP 20 -9.722 27.052 13.206 1.00 1.28 C ATOM 1700 CH2 TRP 20 -10.017 26.057 12.311 1.00 1.28 C ATOM 1701 N ALA 21 -6.071 33.293 10.487 1.00 1.07 N ATOM 1702 CA ALA 21 -5.732 34.658 10.855 1.00 1.07 C ATOM 1703 C ALA 21 -6.001 34.976 12.322 1.00 1.07 C ATOM 1704 O ALA 21 -5.194 35.646 12.976 1.00 1.07 O ATOM 1705 CB ALA 21 -6.527 35.602 9.976 1.00 1.07 C ATOM 1706 N SER 22 -7.098 34.455 12.866 1.00 1.04 N ATOM 1707 CA SER 22 -7.421 34.734 14.259 1.00 1.04 C ATOM 1708 C SER 22 -6.508 33.958 15.220 1.00 1.04 C ATOM 1709 O SER 22 -6.342 34.321 16.389 1.00 1.04 O ATOM 1710 CB SER 22 -8.884 34.410 14.515 1.00 1.04 C ATOM 1711 OG SER 22 -9.130 33.031 14.442 1.00 1.04 O ATOM 1712 N LEU 23 -5.860 32.904 14.729 1.00 1.08 N ATOM 1713 CA LEU 23 -4.989 32.140 15.598 1.00 1.08 C ATOM 1714 C LEU 23 -3.692 32.892 15.675 1.00 1.08 C ATOM 1715 O LEU 23 -3.117 33.056 16.758 1.00 1.08 O ATOM 1716 CB LEU 23 -4.762 30.724 15.049 1.00 1.08 C ATOM 1717 CG LEU 23 -5.996 29.815 15.020 1.00 1.08 C ATOM 1718 CD1 LEU 23 -5.649 28.516 14.285 1.00 1.08 C ATOM 1719 CD2 LEU 23 -6.438 29.521 16.431 1.00 1.08 C ATOM 1720 N ALA 24 -3.258 33.403 14.519 1.00 1.32 N ATOM 1721 CA ALA 24 -2.034 34.174 14.455 1.00 1.32 C ATOM 1722 C ALA 24 -2.163 35.415 15.307 1.00 1.32 C ATOM 1723 O ALA 24 -1.251 35.769 16.048 1.00 1.32 O ATOM 1724 CB ALA 24 -1.725 34.562 13.030 1.00 1.32 C ATOM 1725 N ALA 25 -3.335 36.066 15.263 1.00 1.54 N ATOM 1726 CA ALA 25 -3.490 37.263 16.071 1.00 1.54 C ATOM 1727 C ALA 25 -3.328 36.950 17.541 1.00 1.54 C ATOM 1728 O ALA 25 -2.664 37.683 18.289 1.00 1.54 O ATOM 1729 CB ALA 25 -4.846 37.903 15.857 1.00 1.54 C ATOM 1730 N ASN 26 -3.857 35.817 17.978 1.00 1.92 N ATOM 1731 CA ASN 26 -3.714 35.510 19.381 1.00 1.92 C ATOM 1732 C ASN 26 -2.267 35.149 19.727 1.00 1.92 C ATOM 1733 O ASN 26 -1.699 35.718 20.662 1.00 1.92 O ATOM 1734 CB ASN 26 -4.674 34.399 19.758 1.00 1.92 C ATOM 1735 CG ASN 26 -6.108 34.881 19.806 1.00 1.92 C ATOM 1736 ND2 ASN 26 -7.034 33.961 19.722 1.00 1.92 N ATOM 1737 OD1 ASN 26 -6.375 36.086 19.916 1.00 1.92 O ATOM 1738 N GLU 27 -1.641 34.265 18.948 1.00 2.31 N ATOM 1739 CA GLU 27 -0.278 33.841 19.265 1.00 2.31 C ATOM 1740 C GLU 27 0.724 35.007 19.238 1.00 2.31 C ATOM 1741 O GLU 27 1.613 35.100 20.087 1.00 2.31 O ATOM 1742 CB GLU 27 0.179 32.701 18.350 1.00 2.31 C ATOM 1743 CG GLU 27 1.544 32.115 18.734 1.00 2.31 C ATOM 1744 CD GLU 27 1.916 30.857 17.985 1.00 2.31 C ATOM 1745 OE1 GLU 27 1.160 30.434 17.135 1.00 2.31 O ATOM 1746 OE2 GLU 27 2.959 30.323 18.262 1.00 2.31 O ATOM 1747 N LEU 28 0.550 35.917 18.285 1.00 2.45 N ATOM 1748 CA LEU 28 1.418 37.078 18.133 1.00 2.45 C ATOM 1749 C LEU 28 1.112 38.213 19.102 1.00 2.45 C ATOM 1750 O LEU 28 1.862 39.190 19.161 1.00 2.45 O ATOM 1751 CB LEU 28 1.305 37.619 16.705 1.00 2.45 C ATOM 1752 CG LEU 28 1.856 36.755 15.611 1.00 2.45 C ATOM 1753 CD1 LEU 28 1.475 37.347 14.242 1.00 2.45 C ATOM 1754 CD2 LEU 28 3.358 36.719 15.795 1.00 2.45 C ATOM 1755 N ARG 29 0.024 38.093 19.877 1.00 2.74 N ATOM 1756 CA ARG 29 -0.417 39.143 20.786 1.00 2.74 C ATOM 1757 C ARG 29 -0.672 40.465 20.045 1.00 2.74 C ATOM 1758 O ARG 29 -0.236 41.534 20.480 1.00 2.74 O ATOM 1759 CB ARG 29 0.598 39.342 21.913 1.00 2.74 C ATOM 1760 CG ARG 29 0.481 38.342 23.066 1.00 2.74 C ATOM 1761 CD ARG 29 0.960 36.954 22.687 1.00 2.74 C ATOM 1762 NE ARG 29 0.964 36.057 23.848 1.00 2.74 N ATOM 1763 CZ ARG 29 1.261 34.728 23.843 1.00 2.74 C ATOM 1764 NH1 ARG 29 1.586 34.089 22.736 1.00 2.74 N ATOM 1765 NH2 ARG 29 1.219 34.058 24.982 1.00 2.74 N ATOM 1766 N VAL 30 -1.394 40.372 18.918 1.00 2.93 N ATOM 1767 CA VAL 30 -1.724 41.512 18.055 1.00 2.93 C ATOM 1768 C VAL 30 -3.232 41.605 17.824 1.00 2.93 C ATOM 1769 O VAL 30 -3.989 40.772 18.333 1.00 2.93 O ATOM 1770 CB VAL 30 -0.956 41.398 16.731 1.00 2.93 C ATOM 1771 CG1 VAL 30 0.552 41.428 17.022 1.00 2.93 C ATOM 1772 CG2 VAL 30 -1.358 40.166 16.062 1.00 2.93 C ATOM 1773 N THR 31 -3.698 42.660 17.155 1.00 3.02 N ATOM 1774 CA THR 31 -5.144 42.793 16.960 1.00 3.02 C ATOM 1775 C THR 31 -5.556 41.960 15.760 1.00 3.02 C ATOM 1776 O THR 31 -4.730 41.289 15.145 1.00 3.02 O ATOM 1777 CB THR 31 -5.625 44.231 16.687 1.00 3.02 C ATOM 1778 CG2 THR 31 -4.927 45.181 17.640 1.00 3.02 C ATOM 1779 OG1 THR 31 -5.286 44.608 15.362 1.00 3.02 O ATOM 1780 N GLU 32 -6.839 41.984 15.451 1.00 2.94 N ATOM 1781 CA GLU 32 -7.354 41.275 14.294 1.00 2.94 C ATOM 1782 C GLU 32 -7.549 42.184 13.068 1.00 2.94 C ATOM 1783 O GLU 32 -8.241 41.803 12.121 1.00 2.94 O ATOM 1784 CB GLU 32 -8.668 40.582 14.635 1.00 2.94 C ATOM 1785 CG GLU 32 -8.543 39.475 15.664 1.00 2.94 C ATOM 1786 CD GLU 32 -9.861 38.811 15.930 1.00 2.94 C ATOM 1787 OE1 GLU 32 -10.842 39.506 16.105 1.00 2.94 O ATOM 1788 OE2 GLU 32 -9.905 37.603 15.942 1.00 2.94 O ATOM 1789 N ARG 33 -7.059 43.430 13.113 1.00 2.67 N ATOM 1790 CA ARG 33 -7.274 44.283 11.946 1.00 2.67 C ATOM 1791 C ARG 33 -6.291 45.452 11.787 1.00 2.67 C ATOM 1792 O ARG 33 -5.999 46.155 12.760 1.00 2.67 O ATOM 1793 CB ARG 33 -8.691 44.851 11.979 1.00 2.67 C ATOM 1794 CG ARG 33 -9.124 45.606 10.722 1.00 2.67 C ATOM 1795 CD ARG 33 -10.570 45.964 10.763 1.00 2.67 C ATOM 1796 NE ARG 33 -10.862 46.963 11.781 1.00 2.67 N ATOM 1797 CZ ARG 33 -12.104 47.366 12.126 1.00 2.67 C ATOM 1798 NH1 ARG 33 -13.155 46.847 11.530 1.00 2.67 N ATOM 1799 NH2 ARG 33 -12.266 48.284 13.065 1.00 2.67 N ATOM 1800 N PRO 34 -5.758 45.665 10.565 1.00 2.30 N ATOM 1801 CA PRO 34 -5.754 44.800 9.388 1.00 2.30 C ATOM 1802 C PRO 34 -4.806 43.627 9.617 1.00 2.30 C ATOM 1803 O PRO 34 -3.758 43.777 10.253 1.00 2.30 O ATOM 1804 CB PRO 34 -5.254 45.739 8.285 1.00 2.30 C ATOM 1805 CG PRO 34 -4.462 46.784 9.004 1.00 2.30 C ATOM 1806 CD PRO 34 -5.170 46.969 10.340 1.00 2.30 C ATOM 1807 N PHE 35 -5.117 42.472 9.039 1.00 1.94 N ATOM 1808 CA PHE 35 -4.214 41.344 9.226 1.00 1.94 C ATOM 1809 C PHE 35 -2.973 41.415 8.367 1.00 1.94 C ATOM 1810 O PHE 35 -3.032 41.688 7.165 1.00 1.94 O ATOM 1811 CB PHE 35 -4.889 40.007 8.929 1.00 1.94 C ATOM 1812 CG PHE 35 -5.832 39.518 9.973 1.00 1.94 C ATOM 1813 CD1 PHE 35 -7.194 39.578 9.795 1.00 1.94 C ATOM 1814 CD2 PHE 35 -5.344 38.967 11.147 1.00 1.94 C ATOM 1815 CE1 PHE 35 -8.053 39.088 10.763 1.00 1.94 C ATOM 1816 CE2 PHE 35 -6.215 38.483 12.099 1.00 1.94 C ATOM 1817 CZ PHE 35 -7.564 38.539 11.906 1.00 1.94 C ATOM 1818 N TRP 36 -1.866 41.006 8.967 1.00 1.73 N ATOM 1819 CA TRP 36 -0.571 40.885 8.305 1.00 1.73 C ATOM 1820 C TRP 36 -0.618 39.993 7.080 1.00 1.73 C ATOM 1821 O TRP 36 0.182 40.143 6.159 1.00 1.73 O ATOM 1822 CB TRP 36 0.445 40.349 9.280 1.00 1.73 C ATOM 1823 CG TRP 36 0.111 38.964 9.825 1.00 1.73 C ATOM 1824 CD1 TRP 36 -0.557 38.708 10.988 1.00 1.73 C ATOM 1825 CD2 TRP 36 0.396 37.665 9.242 1.00 1.73 C ATOM 1826 CE2 TRP 36 -0.116 36.708 10.114 1.00 1.73 C ATOM 1827 CE3 TRP 36 1.030 37.246 8.058 1.00 1.73 C ATOM 1828 NE1 TRP 36 -0.689 37.363 11.171 1.00 1.73 N ATOM 1829 CZ2 TRP 36 -0.020 35.358 9.850 1.00 1.73 C ATOM 1830 CZ3 TRP 36 1.124 35.895 7.794 1.00 1.73 C ATOM 1831 CH2 TRP 36 0.605 34.977 8.672 1.00 1.73 C ATOM 1832 N ILE 37 -1.587 39.095 7.071 1.00 1.81 N ATOM 1833 CA ILE 37 -1.824 38.134 6.022 1.00 1.81 C ATOM 1834 C ILE 37 -2.084 38.815 4.698 1.00 1.81 C ATOM 1835 O ILE 37 -1.634 38.336 3.661 1.00 1.81 O ATOM 1836 CB ILE 37 -2.979 37.220 6.408 1.00 1.81 C ATOM 1837 CG1 ILE 37 -2.520 36.386 7.541 1.00 1.81 C ATOM 1838 CG2 ILE 37 -3.376 36.368 5.251 1.00 1.81 C ATOM 1839 CD1 ILE 37 -3.546 35.648 8.230 1.00 1.81 C ATOM 1840 N SER 38 -2.844 39.911 4.701 1.00 1.86 N ATOM 1841 CA SER 38 -3.122 40.570 3.433 1.00 1.86 C ATOM 1842 C SER 38 -1.827 41.084 2.809 1.00 1.86 C ATOM 1843 O SER 38 -1.613 40.943 1.597 1.00 1.86 O ATOM 1844 CB SER 38 -4.090 41.720 3.639 1.00 1.86 C ATOM 1845 OG SER 38 -5.355 41.258 4.041 1.00 1.86 O ATOM 1846 N SER 39 -0.949 41.659 3.645 1.00 2.00 N ATOM 1847 CA SER 39 0.325 42.189 3.172 1.00 2.00 C ATOM 1848 C SER 39 1.266 41.061 2.768 1.00 2.00 C ATOM 1849 O SER 39 1.906 41.124 1.712 1.00 2.00 O ATOM 1850 CB SER 39 0.973 43.048 4.245 1.00 2.00 C ATOM 1851 OG SER 39 0.225 44.208 4.479 1.00 2.00 O ATOM 1852 N PHE 40 1.305 40.006 3.586 1.00 2.31 N ATOM 1853 CA PHE 40 2.145 38.858 3.312 1.00 2.31 C ATOM 1854 C PHE 40 1.805 38.253 1.975 1.00 2.31 C ATOM 1855 O PHE 40 2.687 38.044 1.137 1.00 2.31 O ATOM 1856 CB PHE 40 2.041 37.811 4.423 1.00 2.31 C ATOM 1857 CG PHE 40 2.769 36.557 4.101 1.00 2.31 C ATOM 1858 CD1 PHE 40 4.149 36.495 4.177 1.00 2.31 C ATOM 1859 CD2 PHE 40 2.067 35.423 3.714 1.00 2.31 C ATOM 1860 CE1 PHE 40 4.823 35.329 3.856 1.00 2.31 C ATOM 1861 CE2 PHE 40 2.728 34.258 3.399 1.00 2.31 C ATOM 1862 CZ PHE 40 4.111 34.207 3.466 1.00 2.31 C ATOM 1863 N ILE 41 0.521 38.009 1.743 1.00 2.71 N ATOM 1864 CA ILE 41 0.105 37.465 0.464 1.00 2.71 C ATOM 1865 C ILE 41 0.444 38.424 -0.665 1.00 2.71 C ATOM 1866 O ILE 41 1.093 38.033 -1.633 1.00 2.71 O ATOM 1867 CB ILE 41 -1.396 37.163 0.464 1.00 2.71 C ATOM 1868 CG1 ILE 41 -1.694 36.015 1.410 1.00 2.71 C ATOM 1869 CG2 ILE 41 -1.894 36.855 -0.929 1.00 2.71 C ATOM 1870 CD1 ILE 41 -3.159 35.851 1.666 1.00 2.71 C ATOM 1871 N GLY 42 0.132 39.709 -0.507 1.00 3.15 N ATOM 1872 CA GLY 42 0.443 40.661 -1.569 1.00 3.15 C ATOM 1873 C GLY 42 1.925 40.640 -1.967 1.00 3.15 C ATOM 1874 O GLY 42 2.257 40.855 -3.139 1.00 3.15 O ATOM 1875 N ARG 43 2.815 40.392 -1.000 1.00 3.62 N ATOM 1876 CA ARG 43 4.247 40.329 -1.265 1.00 3.62 C ATOM 1877 C ARG 43 4.787 38.947 -1.690 1.00 3.62 C ATOM 1878 O ARG 43 5.751 38.882 -2.461 1.00 3.62 O ATOM 1879 CB ARG 43 5.011 40.795 -0.036 1.00 3.62 C ATOM 1880 CG ARG 43 4.840 42.276 0.283 1.00 3.62 C ATOM 1881 CD ARG 43 5.601 42.691 1.491 1.00 3.62 C ATOM 1882 NE ARG 43 5.436 44.115 1.766 1.00 3.62 N ATOM 1883 CZ ARG 43 6.084 44.799 2.732 1.00 3.62 C ATOM 1884 NH1 ARG 43 6.951 44.189 3.508 1.00 3.62 N ATOM 1885 NH2 ARG 43 5.849 46.091 2.894 1.00 3.62 N ATOM 1886 N SER 44 4.200 37.846 -1.194 1.00 4.16 N ATOM 1887 CA SER 44 4.750 36.507 -1.448 1.00 4.16 C ATOM 1888 C SER 44 3.892 35.529 -2.269 1.00 4.16 C ATOM 1889 O SER 44 4.405 34.511 -2.738 1.00 4.16 O ATOM 1890 CB SER 44 5.058 35.847 -0.124 1.00 4.16 C ATOM 1891 OG SER 44 3.888 35.664 0.609 1.00 4.16 O ATOM 1892 N LYS 45 2.596 35.784 -2.402 1.00 4.37 N ATOM 1893 CA LYS 45 1.713 34.861 -3.104 1.00 4.37 C ATOM 1894 C LYS 45 0.719 35.600 -3.987 1.00 4.37 C ATOM 1895 O LYS 45 -0.116 36.360 -3.505 1.00 4.37 O ATOM 1896 CB LYS 45 0.966 33.998 -2.086 1.00 4.37 C ATOM 1897 CG LYS 45 0.038 32.967 -2.686 1.00 4.37 C ATOM 1898 CD LYS 45 -0.619 32.116 -1.606 1.00 4.37 C ATOM 1899 CE LYS 45 -1.572 31.096 -2.219 1.00 4.37 C ATOM 1900 NZ LYS 45 -2.212 30.236 -1.182 1.00 4.37 N TER END