####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS366_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.92 5.60 LCS_AVERAGE: 35.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 5 13 18 24 27 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 24 28 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 7 14 20 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 13 15 25 31 33 36 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 6 7 18 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 17 22 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 13 16 21 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 11 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 3 10 16 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 6 7 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 10 12 13 15 20 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 6 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 24 26 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 2 3 3 11 16 22 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 1 3 3 5 7 13 16 22 26 29 34 38 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 3 13 15 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 8 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 15 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 5 6 11 11 11 14 28 31 35 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 5 7 11 11 11 14 17 21 28 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 3 4 6 11 11 11 14 15 17 21 25 29 32 36 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 0 4 11 11 11 12 14 15 18 19 23 24 28 31 34 38 41 41 43 LCS_AVERAGE LCS_A: 50.79 ( 16.68 35.69 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 40.91 50.00 56.82 65.91 75.00 79.55 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.40 0.54 0.62 1.51 1.72 1.91 2.26 2.53 2.73 3.05 3.15 3.30 3.53 3.67 3.67 3.99 3.99 3.99 3.99 3.99 GDT RMS_ALL_AT 5.76 5.87 5.90 4.83 4.96 5.05 5.17 5.15 4.97 4.81 4.80 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.387 0 0.386 0.396 8.352 0.000 0.000 - LGA V 3 V 3 5.900 0 0.234 1.057 6.153 0.000 0.000 6.058 LGA Q 4 Q 4 4.831 0 0.043 0.220 8.629 11.818 5.253 7.088 LGA G 5 G 5 2.919 0 0.261 0.261 6.197 11.818 11.818 - LGA P 6 P 6 5.874 0 0.083 0.152 7.511 0.000 0.000 7.511 LGA W 7 W 7 6.758 0 0.196 1.259 12.535 0.455 0.130 12.389 LGA V 8 V 8 3.888 0 0.417 1.042 6.578 25.455 16.883 3.980 LGA G 9 G 9 4.216 0 0.555 0.555 4.216 15.000 15.000 - LGA S 10 S 10 2.020 0 0.111 0.103 2.539 53.182 48.485 1.868 LGA S 11 S 11 1.494 0 0.127 0.839 3.072 65.909 51.515 3.072 LGA Y 12 Y 12 2.280 0 0.069 0.825 10.359 48.182 17.576 10.359 LGA V 13 V 13 2.154 0 0.078 1.100 6.386 44.545 30.909 6.386 LGA A 14 A 14 2.854 0 0.074 0.089 3.869 29.091 26.909 - LGA E 15 E 15 3.008 0 0.054 1.197 4.787 25.455 17.172 3.980 LGA T 16 T 16 1.239 0 0.084 0.208 1.931 61.818 65.974 0.824 LGA G 17 G 17 1.806 0 0.635 0.635 2.986 48.636 48.636 - LGA Q 18 Q 18 3.465 0 0.611 0.467 7.948 18.636 8.283 7.948 LGA N 19 N 19 2.833 0 0.446 1.375 9.059 38.636 19.545 6.805 LGA W 20 W 20 3.133 0 0.494 1.144 10.736 40.000 11.429 10.736 LGA A 21 A 21 1.352 0 0.033 0.053 1.840 61.818 62.545 - LGA S 22 S 22 1.237 0 0.032 0.598 1.764 65.455 60.606 1.764 LGA L 23 L 23 1.659 0 0.073 1.406 6.249 58.182 34.773 4.221 LGA A 24 A 24 1.631 0 0.040 0.058 1.829 58.182 56.727 - LGA A 25 A 25 0.669 0 0.026 0.037 1.208 77.727 82.182 - LGA N 26 N 26 0.666 0 0.021 0.488 1.225 77.727 75.682 1.213 LGA E 27 E 27 1.128 0 0.153 1.444 6.513 62.727 37.374 6.513 LGA L 28 L 28 1.508 0 0.107 1.406 5.564 51.364 32.955 5.564 LGA R 29 R 29 1.402 0 0.030 1.914 11.473 65.455 27.769 11.473 LGA V 30 V 30 1.074 0 0.238 1.098 2.584 73.636 62.597 2.584 LGA T 31 T 31 1.457 0 0.704 0.779 5.436 45.000 29.870 3.299 LGA E 32 E 32 5.579 0 0.455 1.126 9.924 5.455 2.424 8.978 LGA R 33 R 33 3.950 0 0.158 0.989 8.006 4.091 6.281 5.703 LGA P 34 P 34 6.911 0 0.656 0.613 8.336 0.000 0.000 8.336 LGA F 35 F 35 3.040 0 0.619 1.163 9.961 19.545 8.099 9.961 LGA W 36 W 36 3.669 0 0.599 0.612 8.771 26.364 7.532 8.702 LGA I 37 I 37 3.643 0 0.090 0.881 7.012 30.000 15.227 7.012 LGA S 38 S 38 2.756 0 0.103 0.569 6.263 25.909 17.576 6.263 LGA S 39 S 39 2.649 0 0.212 0.738 4.946 28.182 25.152 3.989 LGA F 40 F 40 3.481 0 0.201 0.337 10.570 19.545 7.603 10.346 LGA I 41 I 41 2.246 0 0.069 0.588 5.857 26.364 17.955 5.475 LGA G 42 G 42 8.527 0 0.143 0.143 11.585 0.000 0.000 - LGA R 43 R 43 10.480 0 0.263 1.387 14.106 0.000 0.000 14.106 LGA S 44 S 44 13.605 0 0.486 0.841 16.357 0.000 0.000 15.116 LGA K 45 K 45 17.834 0 0.583 0.812 19.917 0.000 0.000 19.593 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.508 4.554 6.082 32.304 24.237 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.53 60.227 56.700 1.255 LGA_LOCAL RMSD: 2.530 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.154 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.508 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.886110 * X + -0.461812 * Y + -0.039222 * Z + 94.698540 Y_new = 0.271738 * X + -0.586223 * Y + 0.763218 * Z + -19.433048 Z_new = -0.375456 * X + 0.665637 * Y + 0.644950 * Z + -38.952972 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.844034 0.384888 0.801181 [DEG: 162.9511 22.0525 45.9043 ] ZXZ: -3.090247 0.869839 -0.513570 [DEG: -177.0581 49.8381 -29.4254 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS366_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.53 56.700 4.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS366_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 3023 N ALA 2 9.181 42.026 11.761 1.00 3.17 ATOM 3024 CA ALA 2 9.047 42.933 10.615 1.00 3.17 ATOM 3025 CB ALA 2 8.876 44.382 11.099 1.00 3.17 ATOM 3026 C ALA 2 9.893 42.685 9.354 1.00 3.17 ATOM 3027 O ALA 2 10.864 43.395 9.136 1.00 3.17 ATOM 3029 N VAL 3 9.602 41.619 8.590 1.00 3.60 ATOM 3030 CA VAL 3 10.504 41.027 7.559 1.00 3.60 ATOM 3031 CB VAL 3 10.848 39.569 7.873 1.00 3.60 ATOM 3032 CG1 VAL 3 11.534 39.413 9.232 1.00 3.60 ATOM 3033 CG2 VAL 3 9.658 38.618 7.762 1.00 3.60 ATOM 3034 C VAL 3 9.984 41.279 6.137 1.00 3.60 ATOM 3035 O VAL 3 9.174 42.172 5.947 1.00 3.60 ATOM 3037 N GLN 4 10.440 40.567 5.101 1.00 3.93 ATOM 3038 CA GLN 4 9.964 40.758 3.714 1.00 3.93 ATOM 3039 CB GLN 4 11.140 40.777 2.733 1.00 3.93 ATOM 3040 CG GLN 4 12.205 41.838 3.068 1.00 3.93 ATOM 3041 CD GLN 4 13.562 41.501 2.473 1.00 3.93 ATOM 3042 OE1 GLN 4 13.962 40.344 2.438 1.00 3.93 ATOM 3043 NE2 GLN 4 14.329 42.476 2.062 1.00 3.93 ATOM 3044 C GLN 4 8.965 39.666 3.300 1.00 3.93 ATOM 3045 O GLN 4 9.063 38.528 3.765 1.00 3.93 ATOM 3049 N GLY 5 8.034 40.033 2.406 1.00 4.03 ATOM 3050 CA GLY 5 6.954 39.184 1.875 1.00 4.03 ATOM 3051 C GLY 5 5.554 39.602 2.368 1.00 4.03 ATOM 3052 O GLY 5 5.259 39.365 3.535 1.00 4.03 ATOM 3054 N PRO 6 4.686 40.234 1.550 1.00 4.10 ATOM 3055 CD PRO 6 4.875 40.513 0.134 1.00 4.10 ATOM 3056 CG PRO 6 3.542 41.075 -0.357 1.00 4.10 ATOM 3057 CB PRO 6 2.982 41.772 0.884 1.00 4.10 ATOM 3058 CA PRO 6 3.465 40.894 2.042 1.00 4.10 ATOM 3059 C PRO 6 2.352 39.967 2.550 1.00 4.10 ATOM 3060 O PRO 6 1.601 40.367 3.432 1.00 4.10 ATOM 3061 N TRP 7 2.250 38.729 2.064 1.00 3.86 ATOM 3062 CA TRP 7 1.458 37.692 2.736 1.00 3.86 ATOM 3063 CB TRP 7 1.120 36.563 1.744 1.00 3.86 ATOM 3064 CG TRP 7 0.463 35.347 2.334 1.00 3.86 ATOM 3065 CD1 TRP 7 1.115 34.245 2.772 1.00 3.86 ATOM 3066 NE1 TRP 7 0.213 33.334 3.289 1.00 3.86 ATOM 3067 CE2 TRP 7 -1.079 33.810 3.210 1.00 3.86 ATOM 3068 CZ2 TRP 7 -2.316 33.283 3.610 1.00 3.86 ATOM 3069 CH2 TRP 7 -3.481 34.037 3.394 1.00 3.86 ATOM 3070 CZ3 TRP 7 -3.393 35.305 2.790 1.00 3.86 ATOM 3071 CE3 TRP 7 -2.145 35.827 2.399 1.00 3.86 ATOM 3072 CD2 TRP 7 -0.954 35.092 2.594 1.00 3.86 ATOM 3073 C TRP 7 2.260 37.184 3.933 1.00 3.86 ATOM 3074 O TRP 7 3.129 36.328 3.769 1.00 3.86 ATOM 3077 N VAL 8 1.960 37.731 5.118 1.00 3.40 ATOM 3078 CA VAL 8 1.964 37.053 6.433 1.00 3.40 ATOM 3079 CB VAL 8 0.496 36.770 6.851 1.00 3.40 ATOM 3080 CG1 VAL 8 -0.346 36.088 5.765 1.00 3.40 ATOM 3081 CG2 VAL 8 0.274 36.008 8.161 1.00 3.40 ATOM 3082 C VAL 8 2.915 35.860 6.571 1.00 3.40 ATOM 3083 O VAL 8 2.533 34.748 6.918 1.00 3.40 ATOM 3085 N GLY 9 4.196 36.145 6.333 1.00 3.07 ATOM 3086 CA GLY 9 5.372 35.359 6.702 1.00 3.07 ATOM 3087 C GLY 9 5.144 33.879 6.652 1.00 3.07 ATOM 3088 O GLY 9 5.108 33.291 7.712 1.00 3.07 ATOM 3090 N SER 10 5.030 33.300 5.462 1.00 2.71 ATOM 3091 CA SER 10 4.833 31.856 5.282 1.00 2.71 ATOM 3092 CB SER 10 5.184 31.473 3.839 1.00 2.71 ATOM 3093 OG SER 10 6.469 31.971 3.490 1.00 2.71 ATOM 3094 C SER 10 5.637 30.984 6.256 1.00 2.71 ATOM 3095 O SER 10 5.088 30.065 6.860 1.00 2.71 ATOM 3098 N SER 11 6.908 31.337 6.494 1.00 2.42 ATOM 3099 CA SER 11 7.660 30.796 7.624 1.00 2.42 ATOM 3100 CB SER 11 9.132 31.143 7.594 1.00 2.42 ATOM 3101 OG SER 11 9.587 31.754 6.389 1.00 2.42 ATOM 3102 C SER 11 7.004 31.049 8.996 1.00 2.42 ATOM 3103 O SER 11 6.551 30.087 9.589 1.00 2.42 ATOM 3106 N TYR 12 6.865 32.294 9.465 1.00 2.18 ATOM 3107 CA TYR 12 6.247 32.646 10.757 1.00 2.18 ATOM 3108 CB TYR 12 6.109 34.168 10.821 1.00 2.18 ATOM 3109 CG TYR 12 5.360 34.692 12.014 1.00 2.18 ATOM 3110 CD1 TYR 12 5.604 34.156 13.290 1.00 2.18 ATOM 3111 CE1 TYR 12 4.889 34.625 14.397 1.00 2.18 ATOM 3112 CZ TYR 12 3.933 35.633 14.222 1.00 2.18 ATOM 3113 OH TYR 12 3.164 36.039 15.245 1.00 2.18 ATOM 3114 CE2 TYR 12 3.720 36.205 12.958 1.00 2.18 ATOM 3115 CD2 TYR 12 4.412 35.717 11.843 1.00 2.18 ATOM 3116 C TYR 12 4.904 31.925 11.035 1.00 2.18 ATOM 3117 O TYR 12 4.662 31.422 12.138 1.00 2.18 ATOM 3120 N VAL 13 4.039 31.808 10.027 1.00 2.13 ATOM 3121 CA VAL 13 2.795 31.050 10.164 1.00 2.13 ATOM 3122 CB VAL 13 1.761 31.399 9.095 1.00 2.13 ATOM 3123 CG1 VAL 13 1.267 32.829 9.278 1.00 2.13 ATOM 3124 CG2 VAL 13 2.215 31.220 7.648 1.00 2.13 ATOM 3125 C VAL 13 2.991 29.536 10.187 1.00 2.13 ATOM 3126 O VAL 13 2.258 28.866 10.903 1.00 2.13 ATOM 3128 N ALA 14 3.963 28.965 9.467 1.00 2.23 ATOM 3129 CA ALA 14 4.310 27.560 9.667 1.00 2.23 ATOM 3130 CB ALA 14 5.347 27.131 8.620 1.00 2.23 ATOM 3131 C ALA 14 4.764 27.285 11.116 1.00 2.23 ATOM 3132 O ALA 14 4.185 26.433 11.796 1.00 2.23 ATOM 3134 N GLU 15 5.761 28.052 11.561 1.00 2.32 ATOM 3135 CA GLU 15 6.410 28.053 12.880 1.00 2.32 ATOM 3136 CB GLU 15 7.244 29.327 13.011 1.00 2.32 ATOM 3137 CG GLU 15 8.377 29.371 12.008 1.00 2.32 ATOM 3138 CD GLU 15 9.073 30.720 12.038 1.00 2.32 ATOM 3139 OE1 GLU 15 9.522 31.094 13.143 1.00 2.32 ATOM 3140 OE2 GLU 15 9.206 31.388 10.984 1.00 2.32 ATOM 3141 C GLU 15 5.404 28.073 14.029 1.00 2.32 ATOM 3142 O GLU 15 5.524 27.285 14.968 1.00 2.32 ATOM 3144 N THR 16 4.426 28.987 13.943 1.00 2.55 ATOM 3145 CA THR 16 3.369 29.144 14.949 1.00 2.55 ATOM 3146 CB THR 16 2.782 30.567 14.976 1.00 2.55 ATOM 3147 CG2 THR 16 3.787 31.582 15.508 1.00 2.55 ATOM 3148 OG1 THR 16 2.402 31.011 13.697 1.00 2.55 ATOM 3149 C THR 16 2.239 28.117 14.799 1.00 2.55 ATOM 3150 O THR 16 1.648 27.721 15.805 1.00 2.55 ATOM 3153 N GLY 17 1.956 27.626 13.584 1.00 2.72 ATOM 3154 CA GLY 17 0.993 26.550 13.345 1.00 2.72 ATOM 3155 C GLY 17 0.001 26.783 12.198 1.00 2.72 ATOM 3156 O GLY 17 -0.308 27.898 11.796 1.00 2.72 ATOM 3158 N GLN 18 -0.567 25.683 11.693 1.00 2.63 ATOM 3159 CA GLN 18 -1.160 25.602 10.345 1.00 2.63 ATOM 3160 CB GLN 18 -1.058 24.162 9.796 1.00 2.63 ATOM 3161 CG GLN 18 0.294 23.449 10.035 1.00 2.63 ATOM 3162 CD GLN 18 1.526 24.352 9.914 1.00 2.63 ATOM 3163 OE1 GLN 18 1.694 25.101 8.967 1.00 2.63 ATOM 3164 NE2 GLN 18 2.381 24.350 10.916 1.00 2.63 ATOM 3165 C GLN 18 -2.573 26.221 10.175 1.00 2.63 ATOM 3166 O GLN 18 -3.222 26.002 9.158 1.00 2.63 ATOM 3170 N ASN 19 -3.054 27.036 11.122 1.00 2.68 ATOM 3171 CA ASN 19 -4.239 27.903 10.966 1.00 2.68 ATOM 3172 CB ASN 19 -5.133 27.765 12.216 1.00 2.68 ATOM 3173 CG ASN 19 -6.463 28.500 12.091 1.00 2.68 ATOM 3174 OD1 ASN 19 -6.904 28.887 11.024 1.00 2.68 ATOM 3175 ND2 ASN 19 -7.169 28.695 13.181 1.00 2.68 ATOM 3176 C ASN 19 -3.771 29.350 10.674 1.00 2.68 ATOM 3177 O ASN 19 -4.071 30.309 11.393 1.00 2.68 ATOM 3181 N TRP 20 -2.913 29.428 9.652 1.00 2.59 ATOM 3182 CA TRP 20 -1.806 30.373 9.487 1.00 2.59 ATOM 3183 CB TRP 20 -1.388 30.347 8.000 1.00 2.59 ATOM 3184 CG TRP 20 -0.589 29.163 7.523 1.00 2.59 ATOM 3185 CD1 TRP 20 0.105 28.294 8.298 1.00 2.59 ATOM 3186 NE1 TRP 20 0.737 27.356 7.508 1.00 2.59 ATOM 3187 CE2 TRP 20 0.531 27.599 6.170 1.00 2.59 ATOM 3188 CZ2 TRP 20 0.974 26.959 5.002 1.00 2.59 ATOM 3189 CH2 TRP 20 0.600 27.485 3.753 1.00 2.59 ATOM 3190 CZ3 TRP 20 -0.212 28.633 3.692 1.00 2.59 ATOM 3191 CE3 TRP 20 -0.662 29.255 4.872 1.00 2.59 ATOM 3192 CD2 TRP 20 -0.310 28.752 6.145 1.00 2.59 ATOM 3193 C TRP 20 -2.008 31.787 10.039 1.00 2.59 ATOM 3194 O TRP 20 -1.567 32.100 11.145 1.00 2.59 ATOM 3197 N ALA 21 -2.621 32.663 9.248 1.00 2.35 ATOM 3198 CA ALA 21 -2.513 34.099 9.460 1.00 2.35 ATOM 3199 CB ALA 21 -2.991 34.765 8.167 1.00 2.35 ATOM 3200 C ALA 21 -3.247 34.594 10.722 1.00 2.35 ATOM 3201 O ALA 21 -2.762 35.485 11.424 1.00 2.35 ATOM 3203 N SER 22 -4.407 33.998 11.018 1.00 2.02 ATOM 3204 CA SER 22 -5.197 34.247 12.227 1.00 2.02 ATOM 3205 CB SER 22 -6.543 33.516 12.127 1.00 2.02 ATOM 3206 OG SER 22 -7.181 33.812 10.899 1.00 2.02 ATOM 3207 C SER 22 -4.482 33.760 13.492 1.00 2.02 ATOM 3208 O SER 22 -4.411 34.492 14.480 1.00 2.02 ATOM 3211 N LEU 23 -3.908 32.546 13.455 1.00 1.71 ATOM 3212 CA LEU 23 -3.147 32.005 14.585 1.00 1.71 ATOM 3213 CB LEU 23 -2.776 30.542 14.289 1.00 1.71 ATOM 3214 CG LEU 23 -2.126 29.794 15.470 1.00 1.71 ATOM 3215 CD1 LEU 23 -3.110 29.574 16.624 1.00 1.71 ATOM 3216 CD2 LEU 23 -1.662 28.421 14.990 1.00 1.71 ATOM 3217 C LEU 23 -1.903 32.838 14.910 1.00 1.71 ATOM 3218 O LEU 23 -1.697 33.168 16.075 1.00 1.71 ATOM 3220 N ALA 24 -1.134 33.228 13.889 1.00 1.51 ATOM 3221 CA ALA 24 -0.013 34.149 14.043 1.00 1.51 ATOM 3222 CB ALA 24 0.671 34.293 12.686 1.00 1.51 ATOM 3223 C ALA 24 -0.469 35.502 14.624 1.00 1.51 ATOM 3224 O ALA 24 0.142 36.009 15.558 1.00 1.51 ATOM 3226 N ALA 25 -1.574 36.081 14.137 1.00 1.50 ATOM 3227 CA ALA 25 -2.070 37.361 14.654 1.00 1.50 ATOM 3228 CB ALA 25 -3.291 37.781 13.818 1.00 1.50 ATOM 3229 C ALA 25 -2.389 37.331 16.157 1.00 1.50 ATOM 3230 O ALA 25 -2.009 38.239 16.914 1.00 1.50 ATOM 3232 N ASN 26 -3.058 36.254 16.574 1.00 1.70 ATOM 3233 CA ASN 26 -3.407 36.070 17.971 1.00 1.70 ATOM 3234 CB ASN 26 -4.515 35.003 18.076 1.00 1.70 ATOM 3235 CG ASN 26 -5.893 35.606 17.817 1.00 1.70 ATOM 3236 OD1 ASN 26 -6.123 36.345 16.877 1.00 1.70 ATOM 3237 ND2 ASN 26 -6.835 35.385 18.708 1.00 1.70 ATOM 3238 C ASN 26 -2.179 35.792 18.856 1.00 1.70 ATOM 3239 O ASN 26 -2.132 36.323 19.966 1.00 1.70 ATOM 3243 N GLU 27 -1.201 35.015 18.371 1.00 1.82 ATOM 3244 CA GLU 27 0.064 34.680 19.053 1.00 1.82 ATOM 3245 CB GLU 27 0.819 33.602 18.248 1.00 1.82 ATOM 3246 CG GLU 27 2.189 33.177 18.828 1.00 1.82 ATOM 3247 CD GLU 27 3.381 34.073 18.433 1.00 1.82 ATOM 3248 OE1 GLU 27 4.328 34.211 19.241 1.00 1.82 ATOM 3249 OE2 GLU 27 3.416 34.567 17.286 1.00 1.82 ATOM 3250 C GLU 27 0.958 35.901 19.283 1.00 1.82 ATOM 3251 O GLU 27 1.322 36.161 20.428 1.00 1.82 ATOM 3253 N LEU 28 1.204 36.714 18.244 1.00 1.83 ATOM 3254 CA LEU 28 1.861 38.015 18.396 1.00 1.83 ATOM 3255 CB LEU 28 2.088 38.694 17.032 1.00 1.83 ATOM 3256 CG LEU 28 2.880 40.019 17.042 1.00 1.83 ATOM 3257 CD1 LEU 28 4.213 39.953 17.794 1.00 1.83 ATOM 3258 CD2 LEU 28 3.185 40.449 15.604 1.00 1.83 ATOM 3259 C LEU 28 1.103 38.952 19.359 1.00 1.83 ATOM 3260 O LEU 28 1.641 39.967 19.805 1.00 1.83 ATOM 3262 N ARG 29 -0.168 38.638 19.656 1.00 2.01 ATOM 3263 CA ARG 29 -1.159 39.567 20.193 1.00 2.01 ATOM 3264 CB ARG 29 -1.071 39.576 21.734 1.00 2.01 ATOM 3265 CG ARG 29 -2.146 40.375 22.500 1.00 2.01 ATOM 3266 CD ARG 29 -3.546 40.417 21.863 1.00 2.01 ATOM 3267 NE ARG 29 -4.016 39.089 21.439 1.00 2.01 ATOM 3268 CZ ARG 29 -5.099 38.850 20.726 1.00 2.01 ATOM 3269 NH1 ARG 29 -5.321 37.656 20.283 1.00 2.01 ATOM 3270 NH2 ARG 29 -5.982 39.760 20.446 1.00 2.01 ATOM 3271 C ARG 29 -1.124 40.926 19.488 1.00 2.01 ATOM 3272 O ARG 29 -1.304 41.975 20.110 1.00 2.01 ATOM 3279 N VAL 30 -1.039 40.895 18.150 1.00 2.05 ATOM 3280 CA VAL 30 -1.773 41.932 17.411 1.00 2.05 ATOM 3281 CB VAL 30 -1.338 42.089 15.943 1.00 2.05 ATOM 3282 CG1 VAL 30 0.070 42.682 15.841 1.00 2.05 ATOM 3283 CG2 VAL 30 -1.401 40.795 15.144 1.00 2.05 ATOM 3284 C VAL 30 -3.280 41.662 17.602 1.00 2.05 ATOM 3285 O VAL 30 -3.684 40.651 18.180 1.00 2.05 ATOM 3287 N THR 31 -4.156 42.562 17.154 1.00 2.20 ATOM 3288 CA THR 31 -5.588 42.225 17.047 1.00 2.20 ATOM 3289 CB THR 31 -6.405 43.412 16.500 1.00 2.20 ATOM 3290 CG2 THR 31 -7.824 43.487 17.066 1.00 2.20 ATOM 3291 OG1 THR 31 -5.809 44.663 16.767 1.00 2.20 ATOM 3292 C THR 31 -5.806 41.015 16.124 1.00 2.20 ATOM 3293 O THR 31 -4.925 40.703 15.325 1.00 2.20 ATOM 3296 N GLU 32 -7.006 40.424 16.177 1.00 2.40 ATOM 3297 CA GLU 32 -7.631 39.353 15.364 1.00 2.40 ATOM 3298 CB GLU 32 -9.034 39.068 15.962 1.00 2.40 ATOM 3299 CG GLU 32 -9.096 38.229 17.248 1.00 2.40 ATOM 3300 CD GLU 32 -8.356 38.810 18.458 1.00 2.40 ATOM 3301 OE1 GLU 32 -7.869 38.006 19.285 1.00 2.40 ATOM 3302 OE2 GLU 32 -8.218 40.048 18.587 1.00 2.40 ATOM 3303 C GLU 32 -7.738 39.636 13.835 1.00 2.40 ATOM 3304 O GLU 32 -8.790 39.487 13.209 1.00 2.40 ATOM 3306 N ARG 33 -6.676 40.143 13.210 1.00 2.44 ATOM 3307 CA ARG 33 -6.620 40.751 11.884 1.00 2.44 ATOM 3308 CB ARG 33 -6.678 42.290 11.996 1.00 2.44 ATOM 3309 CG ARG 33 -7.821 42.859 12.866 1.00 2.44 ATOM 3310 CD ARG 33 -9.241 42.576 12.353 1.00 2.44 ATOM 3311 NE ARG 33 -10.259 42.948 13.365 1.00 2.44 ATOM 3312 CZ ARG 33 -11.099 42.147 14.009 1.00 2.44 ATOM 3313 NH1 ARG 33 -11.977 42.660 14.823 1.00 2.44 ATOM 3314 NH2 ARG 33 -11.112 40.851 13.887 1.00 2.44 ATOM 3315 C ARG 33 -5.331 40.248 11.194 1.00 2.44 ATOM 3316 O ARG 33 -4.229 40.791 11.386 1.00 2.44 ATOM 3323 N PRO 34 -5.443 39.210 10.345 1.00 2.51 ATOM 3324 CD PRO 34 -6.637 38.434 10.020 1.00 2.51 ATOM 3325 CG PRO 34 -6.317 37.713 8.716 1.00 2.51 ATOM 3326 CB PRO 34 -4.810 37.513 8.805 1.00 2.51 ATOM 3327 CA PRO 34 -4.295 38.726 9.581 1.00 2.51 ATOM 3328 C PRO 34 -3.692 39.810 8.672 1.00 2.51 ATOM 3329 O PRO 34 -2.544 39.683 8.261 1.00 2.51 ATOM 3330 N PHE 35 -4.412 40.913 8.412 1.00 2.63 ATOM 3331 CA PHE 35 -3.867 42.137 7.814 1.00 2.63 ATOM 3332 CB PHE 35 -5.012 43.146 7.624 1.00 2.63 ATOM 3333 CG PHE 35 -4.725 44.227 6.599 1.00 2.63 ATOM 3334 CD1 PHE 35 -5.162 44.067 5.269 1.00 2.63 ATOM 3335 CE1 PHE 35 -4.912 45.071 4.316 1.00 2.63 ATOM 3336 CZ PHE 35 -4.218 46.237 4.687 1.00 2.63 ATOM 3337 CE2 PHE 35 -3.775 46.396 6.012 1.00 2.63 ATOM 3338 CD2 PHE 35 -4.031 45.395 6.966 1.00 2.63 ATOM 3339 C PHE 35 -2.699 42.762 8.618 1.00 2.63 ATOM 3340 O PHE 35 -1.713 43.223 8.040 1.00 2.63 ATOM 3342 N TRP 36 -2.755 42.728 9.955 1.00 2.89 ATOM 3343 CA TRP 36 -1.672 43.203 10.823 1.00 2.89 ATOM 3344 CB TRP 36 -2.132 43.245 12.285 1.00 2.89 ATOM 3345 CG TRP 36 -3.261 44.162 12.667 1.00 2.89 ATOM 3346 CD1 TRP 36 -3.993 44.004 13.791 1.00 2.89 ATOM 3347 NE1 TRP 36 -4.890 45.041 13.927 1.00 2.89 ATOM 3348 CE2 TRP 36 -4.831 45.899 12.852 1.00 2.89 ATOM 3349 CZ2 TRP 36 -5.550 47.057 12.526 1.00 2.89 ATOM 3350 CH2 TRP 36 -5.244 47.737 11.336 1.00 2.89 ATOM 3351 CZ3 TRP 36 -4.222 47.257 10.500 1.00 2.89 ATOM 3352 CE3 TRP 36 -3.499 46.097 10.841 1.00 2.89 ATOM 3353 CD2 TRP 36 -3.786 45.375 12.024 1.00 2.89 ATOM 3354 C TRP 36 -0.428 42.326 10.688 1.00 2.89 ATOM 3355 O TRP 36 0.672 42.858 10.488 1.00 2.89 ATOM 3358 N ILE 37 -0.585 40.991 10.708 1.00 3.10 ATOM 3359 CA ILE 37 0.620 40.155 10.467 1.00 3.10 ATOM 3360 CB ILE 37 0.432 38.671 10.804 1.00 3.10 ATOM 3361 CG2 ILE 37 1.739 37.903 10.538 1.00 3.10 ATOM 3362 CG1 ILE 37 0.037 38.466 12.270 1.00 3.10 ATOM 3363 CD1 ILE 37 0.970 39.120 13.297 1.00 3.10 ATOM 3364 C ILE 37 1.168 40.332 9.037 1.00 3.10 ATOM 3365 O ILE 37 2.378 40.423 8.849 1.00 3.10 ATOM 3367 N SER 38 0.292 40.482 8.042 1.00 3.26 ATOM 3368 CA SER 38 0.632 40.843 6.653 1.00 3.26 ATOM 3369 CB SER 38 -0.625 40.765 5.773 1.00 3.26 ATOM 3370 OG SER 38 -1.263 39.510 5.876 1.00 3.26 ATOM 3371 C SER 38 1.209 42.266 6.486 1.00 3.26 ATOM 3372 O SER 38 1.576 42.690 5.385 1.00 3.26 ATOM 3375 N SER 39 1.251 43.054 7.561 1.00 3.50 ATOM 3376 CA SER 39 1.976 44.323 7.620 1.00 3.50 ATOM 3377 CB SER 39 1.197 45.345 8.457 1.00 3.50 ATOM 3378 OG SER 39 -0.107 45.537 7.943 1.00 3.50 ATOM 3379 C SER 39 3.386 44.118 8.197 1.00 3.50 ATOM 3380 O SER 39 4.387 44.547 7.608 1.00 3.50 ATOM 3383 N PHE 40 3.480 43.440 9.348 1.00 3.55 ATOM 3384 CA PHE 40 4.780 43.200 9.984 1.00 3.55 ATOM 3385 CB PHE 40 4.588 42.681 11.420 1.00 3.55 ATOM 3386 CG PHE 40 4.306 43.773 12.455 1.00 3.55 ATOM 3387 CD1 PHE 40 3.201 44.640 12.326 1.00 3.55 ATOM 3388 CE1 PHE 40 2.958 45.642 13.286 1.00 3.55 ATOM 3389 CZ PHE 40 3.797 45.766 14.408 1.00 3.55 ATOM 3390 CE2 PHE 40 4.892 44.897 14.555 1.00 3.55 ATOM 3391 CD2 PHE 40 5.148 43.918 13.578 1.00 3.55 ATOM 3392 C PHE 40 5.694 42.324 9.094 1.00 3.55 ATOM 3393 O PHE 40 6.705 42.792 8.548 1.00 3.55 ATOM 3395 N ILE 41 5.267 41.101 8.785 1.00 3.85 ATOM 3396 CA ILE 41 5.827 40.435 7.615 1.00 3.85 ATOM 3397 CB ILE 41 5.356 38.984 7.435 1.00 3.85 ATOM 3398 CG2 ILE 41 6.365 38.323 6.457 1.00 3.85 ATOM 3399 CG1 ILE 41 5.119 38.207 8.761 1.00 3.85 ATOM 3400 CD1 ILE 41 6.373 37.829 9.546 1.00 3.85 ATOM 3401 C ILE 41 5.438 41.252 6.378 1.00 3.85 ATOM 3402 O ILE 41 4.320 41.746 6.247 1.00 3.85 ATOM 3404 N GLY 42 6.399 41.449 5.495 1.00 4.10 ATOM 3405 CA GLY 42 6.318 42.346 4.368 1.00 4.10 ATOM 3406 C GLY 42 6.938 43.712 4.630 1.00 4.10 ATOM 3407 O GLY 42 7.440 44.269 3.655 1.00 4.10 ATOM 3409 N ARG 43 6.961 44.253 5.869 1.00 3.78 ATOM 3410 CA ARG 43 7.732 45.490 6.134 1.00 3.78 ATOM 3411 CB ARG 43 6.864 46.607 6.769 1.00 3.78 ATOM 3412 CG ARG 43 5.550 47.093 6.097 1.00 3.78 ATOM 3413 CD ARG 43 5.317 46.858 4.591 1.00 3.78 ATOM 3414 NE ARG 43 3.890 46.597 4.261 1.00 3.78 ATOM 3415 CZ ARG 43 3.260 45.433 4.351 1.00 3.78 ATOM 3416 NH1 ARG 43 2.033 45.269 3.958 1.00 3.78 ATOM 3417 NH2 ARG 43 3.801 44.385 4.882 1.00 3.78 ATOM 3418 C ARG 43 9.008 45.216 6.937 1.00 3.78 ATOM 3419 O ARG 43 8.950 45.202 8.155 1.00 3.78 ATOM 3426 N SER 44 10.142 45.071 6.241 1.00 3.48 ATOM 3427 CA SER 44 11.546 44.917 6.705 1.00 3.48 ATOM 3428 CB SER 44 12.405 44.759 5.445 1.00 3.48 ATOM 3429 OG SER 44 12.290 45.882 4.596 1.00 3.48 ATOM 3430 C SER 44 12.089 46.086 7.586 1.00 3.48 ATOM 3431 O SER 44 13.181 46.585 7.325 1.00 3.48 ATOM 3434 N LYS 45 11.305 46.607 8.546 1.00 3.00 ATOM 3435 CA LYS 45 11.381 47.987 9.102 1.00 3.00 ATOM 3436 CB LYS 45 10.502 48.128 10.356 1.00 3.00 ATOM 3437 CG LYS 45 8.990 47.938 10.210 1.00 3.00 ATOM 3438 CD LYS 45 8.370 47.910 11.615 1.00 3.00 ATOM 3439 CE LYS 45 6.937 47.375 11.576 1.00 3.00 ATOM 3440 NZ LYS 45 6.476 47.039 12.943 1.00 3.00 ATOM 3441 C LYS 45 12.763 48.542 9.474 1.00 3.00 ATOM 3442 O LYS 45 13.169 49.592 8.984 1.00 3.00 TER END