####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS366_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.92 5.60 LCS_AVERAGE: 35.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 5 13 18 24 27 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 24 28 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 7 14 20 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 13 15 25 31 33 36 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 6 7 18 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 17 22 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 13 16 21 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 11 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 3 10 16 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 6 7 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 10 12 13 15 20 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 6 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 24 26 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 2 3 3 11 16 22 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 1 3 3 5 7 13 16 22 26 29 34 38 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 3 13 15 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 8 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 15 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 5 6 11 11 11 14 28 31 35 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 5 7 11 11 11 14 17 21 28 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 3 4 6 11 11 11 14 15 17 21 25 29 32 36 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 0 4 11 11 11 12 14 15 18 19 23 24 28 31 34 38 41 41 43 LCS_AVERAGE LCS_A: 50.79 ( 16.68 35.69 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 40.91 50.00 56.82 65.91 75.00 79.55 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.40 0.54 0.62 1.51 1.72 1.91 2.26 2.53 2.73 3.05 3.15 3.30 3.53 3.67 3.67 3.99 3.99 3.99 3.99 3.99 GDT RMS_ALL_AT 5.76 5.87 5.90 4.83 4.96 5.05 5.17 5.15 4.97 4.81 4.80 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.387 0 0.386 0.396 8.353 0.000 0.000 - LGA V 3 V 3 5.900 0 0.235 1.057 6.153 0.000 0.000 6.058 LGA Q 4 Q 4 4.831 0 0.042 0.220 8.629 11.818 5.253 7.089 LGA G 5 G 5 2.919 0 0.261 0.261 6.197 11.818 11.818 - LGA P 6 P 6 5.874 0 0.084 0.152 7.511 0.000 0.000 7.511 LGA W 7 W 7 6.758 0 0.195 1.259 12.535 0.455 0.130 12.389 LGA V 8 V 8 3.889 0 0.417 1.042 6.578 25.455 16.883 3.980 LGA G 9 G 9 4.216 0 0.555 0.555 4.216 15.000 15.000 - LGA S 10 S 10 2.020 0 0.111 0.102 2.539 53.182 48.485 1.869 LGA S 11 S 11 1.494 0 0.127 0.839 3.072 65.909 51.515 3.072 LGA Y 12 Y 12 2.280 0 0.069 0.824 10.359 48.182 17.576 10.359 LGA V 13 V 13 2.154 0 0.079 1.100 6.385 44.545 30.909 6.385 LGA A 14 A 14 2.854 0 0.076 0.090 3.869 29.091 26.909 - LGA E 15 E 15 3.008 0 0.054 1.196 4.786 25.455 17.172 3.980 LGA T 16 T 16 1.239 0 0.085 0.209 1.930 61.818 65.974 0.824 LGA G 17 G 17 1.805 0 0.635 0.635 2.986 48.636 48.636 - LGA Q 18 Q 18 3.465 0 0.611 0.467 7.948 18.636 8.283 7.948 LGA N 19 N 19 2.833 0 0.446 1.375 9.059 38.636 19.545 6.805 LGA W 20 W 20 3.133 0 0.494 1.144 10.735 40.000 11.429 10.735 LGA A 21 A 21 1.352 0 0.033 0.053 1.841 61.818 62.545 - LGA S 22 S 22 1.236 0 0.033 0.598 1.763 65.455 60.606 1.763 LGA L 23 L 23 1.658 0 0.072 1.406 6.249 58.182 34.773 4.222 LGA A 24 A 24 1.631 0 0.042 0.058 1.829 58.182 56.727 - LGA A 25 A 25 0.670 0 0.028 0.037 1.208 77.727 82.182 - LGA N 26 N 26 0.667 0 0.016 0.488 1.226 77.727 75.682 1.214 LGA E 27 E 27 1.128 0 0.153 1.444 6.513 62.727 37.374 6.513 LGA L 28 L 28 1.507 0 0.108 1.406 5.563 51.364 32.955 5.563 LGA R 29 R 29 1.401 0 0.033 1.914 11.473 65.455 27.769 11.473 LGA V 30 V 30 1.074 0 0.237 1.098 2.584 73.636 62.597 2.584 LGA T 31 T 31 1.457 0 0.704 0.778 5.436 45.000 29.870 3.300 LGA E 32 E 32 5.578 0 0.455 1.126 9.924 5.455 2.424 8.977 LGA R 33 R 33 3.950 0 0.160 0.990 8.007 4.091 6.281 5.703 LGA P 34 P 34 6.911 0 0.656 0.612 8.335 0.000 0.000 8.335 LGA F 35 F 35 3.040 0 0.620 1.163 9.960 19.545 8.099 9.960 LGA W 36 W 36 3.669 0 0.599 0.612 8.771 26.364 7.532 8.702 LGA I 37 I 37 3.642 0 0.090 0.881 7.013 30.000 15.227 7.013 LGA S 38 S 38 2.756 0 0.103 0.569 6.263 25.909 17.576 6.263 LGA S 39 S 39 2.649 0 0.211 0.738 4.946 28.182 25.152 3.989 LGA F 40 F 40 3.481 0 0.201 0.337 10.570 19.545 7.603 10.346 LGA I 41 I 41 2.245 0 0.070 0.588 5.857 26.364 17.955 5.476 LGA G 42 G 42 8.527 0 0.144 0.144 11.586 0.000 0.000 - LGA R 43 R 43 10.481 0 0.263 1.387 14.106 0.000 0.000 14.106 LGA S 44 S 44 13.605 0 0.486 0.841 16.357 0.000 0.000 15.116 LGA K 45 K 45 17.834 0 0.583 0.812 19.917 0.000 0.000 19.593 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.508 4.554 6.082 32.304 24.237 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.53 60.227 56.700 1.255 LGA_LOCAL RMSD: 2.530 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.154 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.508 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.549876 * X + 0.791743 * Y + 0.266042 * Z + -22.792574 Y_new = -0.716677 * X + -0.283658 * Y + -0.637113 * Z + 124.390762 Z_new = -0.428965 * X + -0.541000 * Y + 0.723401 * Z + 7.506120 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.225252 0.443346 -0.642127 [DEG: -127.4975 25.4019 -36.7912 ] ZXZ: 0.395565 0.762081 -2.471189 [DEG: 22.6642 43.6640 -141.5887 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS366_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS366_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.53 56.700 4.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS366_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 3023 N ALA 2 9.181 42.026 11.761 1.00 2.89 ATOM 3024 CA ALA 2 9.047 42.932 10.615 1.00 2.89 ATOM 3025 CB ALA 2 8.876 44.383 11.098 1.00 2.89 ATOM 3026 C ALA 2 9.893 42.685 9.355 1.00 2.89 ATOM 3027 O ALA 2 10.864 43.396 9.136 1.00 2.89 ATOM 3029 N VAL 3 9.601 41.619 8.590 1.00 3.20 ATOM 3030 CA VAL 3 10.503 41.028 7.559 1.00 3.20 ATOM 3031 CB VAL 3 10.848 39.569 7.873 1.00 3.20 ATOM 3032 CG1 VAL 3 11.534 39.413 9.232 1.00 3.20 ATOM 3033 CG2 VAL 3 9.657 38.618 7.762 1.00 3.20 ATOM 3034 C VAL 3 9.983 41.279 6.137 1.00 3.20 ATOM 3035 O VAL 3 9.174 42.173 5.947 1.00 3.20 ATOM 3037 N GLN 4 10.439 40.567 5.102 1.00 3.42 ATOM 3038 CA GLN 4 9.964 40.758 3.714 1.00 3.42 ATOM 3039 CB GLN 4 11.141 40.778 2.733 1.00 3.42 ATOM 3040 CG GLN 4 12.205 41.838 3.068 1.00 3.42 ATOM 3041 CD GLN 4 13.562 41.500 2.473 1.00 3.42 ATOM 3042 OE1 GLN 4 13.961 40.344 2.438 1.00 3.42 ATOM 3043 NE2 GLN 4 14.329 42.477 2.062 1.00 3.42 ATOM 3044 C GLN 4 8.965 39.666 3.300 1.00 3.42 ATOM 3045 O GLN 4 9.062 38.527 3.765 1.00 3.42 ATOM 3049 N GLY 5 8.034 40.033 2.406 1.00 3.37 ATOM 3050 CA GLY 5 6.954 39.185 1.875 1.00 3.37 ATOM 3051 C GLY 5 5.554 39.602 2.368 1.00 3.37 ATOM 3052 O GLY 5 5.258 39.365 3.535 1.00 3.37 ATOM 3054 N PRO 6 4.686 40.234 1.550 1.00 3.23 ATOM 3055 CD PRO 6 4.874 40.512 0.134 1.00 3.23 ATOM 3056 CG PRO 6 3.542 41.075 -0.357 1.00 3.23 ATOM 3057 CB PRO 6 2.982 41.772 0.884 1.00 3.23 ATOM 3058 CA PRO 6 3.466 40.894 2.042 1.00 3.23 ATOM 3059 C PRO 6 2.352 39.967 2.551 1.00 3.23 ATOM 3060 O PRO 6 1.600 40.368 3.432 1.00 3.23 ATOM 3061 N TRP 7 2.251 38.729 2.064 1.00 2.90 ATOM 3062 CA TRP 7 1.458 37.693 2.735 1.00 2.90 ATOM 3063 CB TRP 7 1.120 36.563 1.744 1.00 2.90 ATOM 3064 CG TRP 7 0.464 35.347 2.334 1.00 2.90 ATOM 3065 CD1 TRP 7 1.114 34.244 2.772 1.00 2.90 ATOM 3066 NE1 TRP 7 0.212 33.334 3.289 1.00 2.90 ATOM 3067 CE2 TRP 7 -1.078 33.809 3.211 1.00 2.90 ATOM 3068 CZ2 TRP 7 -2.316 33.282 3.611 1.00 2.90 ATOM 3069 CH2 TRP 7 -3.481 34.037 3.395 1.00 2.90 ATOM 3070 CZ3 TRP 7 -3.394 35.304 2.791 1.00 2.90 ATOM 3071 CE3 TRP 7 -2.145 35.827 2.400 1.00 2.90 ATOM 3072 CD2 TRP 7 -0.954 35.092 2.594 1.00 2.90 ATOM 3073 C TRP 7 2.260 37.184 3.933 1.00 2.90 ATOM 3074 O TRP 7 3.128 36.328 3.770 1.00 2.90 ATOM 3077 N VAL 8 1.960 37.731 5.119 1.00 2.48 ATOM 3078 CA VAL 8 1.964 37.053 6.434 1.00 2.48 ATOM 3079 CB VAL 8 0.496 36.770 6.851 1.00 2.48 ATOM 3080 CG1 VAL 8 -0.346 36.088 5.765 1.00 2.48 ATOM 3081 CG2 VAL 8 0.274 36.008 8.161 1.00 2.48 ATOM 3082 C VAL 8 2.916 35.859 6.571 1.00 2.48 ATOM 3083 O VAL 8 2.534 34.748 6.918 1.00 2.48 ATOM 3085 N GLY 9 4.195 36.145 6.333 1.00 2.16 ATOM 3086 CA GLY 9 5.371 35.359 6.703 1.00 2.16 ATOM 3087 C GLY 9 5.144 33.879 6.652 1.00 2.16 ATOM 3088 O GLY 9 5.108 33.292 7.713 1.00 2.16 ATOM 3090 N SER 10 5.030 33.300 5.461 1.00 1.75 ATOM 3091 CA SER 10 4.833 31.856 5.282 1.00 1.75 ATOM 3092 CB SER 10 5.184 31.472 3.839 1.00 1.75 ATOM 3093 OG SER 10 6.469 31.972 3.490 1.00 1.75 ATOM 3094 C SER 10 5.636 30.985 6.256 1.00 1.75 ATOM 3095 O SER 10 5.088 30.065 6.860 1.00 1.75 ATOM 3098 N SER 11 6.909 31.337 6.493 1.00 1.37 ATOM 3099 CA SER 11 7.660 30.796 7.624 1.00 1.37 ATOM 3100 CB SER 11 9.132 31.143 7.594 1.00 1.37 ATOM 3101 OG SER 11 9.586 31.754 6.389 1.00 1.37 ATOM 3102 C SER 11 7.005 31.049 8.996 1.00 1.37 ATOM 3103 O SER 11 6.551 30.087 9.588 1.00 1.37 ATOM 3106 N TYR 12 6.864 32.294 9.465 1.00 1.14 ATOM 3107 CA TYR 12 6.247 32.647 10.757 1.00 1.14 ATOM 3108 CB TYR 12 6.108 34.168 10.821 1.00 1.14 ATOM 3109 CG TYR 12 5.359 34.692 12.014 1.00 1.14 ATOM 3110 CD1 TYR 12 5.604 34.156 13.291 1.00 1.14 ATOM 3111 CE1 TYR 12 4.889 34.625 14.398 1.00 1.14 ATOM 3112 CZ TYR 12 3.933 35.633 14.222 1.00 1.14 ATOM 3113 OH TYR 12 3.164 36.038 15.245 1.00 1.14 ATOM 3114 CE2 TYR 12 3.720 36.204 12.958 1.00 1.14 ATOM 3115 CD2 TYR 12 4.412 35.717 11.843 1.00 1.14 ATOM 3116 C TYR 12 4.905 31.925 11.035 1.00 1.14 ATOM 3117 O TYR 12 4.662 31.422 12.139 1.00 1.14 ATOM 3120 N VAL 13 4.039 31.807 10.027 1.00 1.18 ATOM 3121 CA VAL 13 2.795 31.050 10.164 1.00 1.18 ATOM 3122 CB VAL 13 1.761 31.399 9.095 1.00 1.18 ATOM 3123 CG1 VAL 13 1.267 32.828 9.278 1.00 1.18 ATOM 3124 CG2 VAL 13 2.214 31.220 7.647 1.00 1.18 ATOM 3125 C VAL 13 2.991 29.536 10.187 1.00 1.18 ATOM 3126 O VAL 13 2.258 28.867 10.903 1.00 1.18 ATOM 3128 N ALA 14 3.963 28.965 9.467 1.00 1.32 ATOM 3129 CA ALA 14 4.310 27.559 9.666 1.00 1.32 ATOM 3130 CB ALA 14 5.347 27.131 8.620 1.00 1.32 ATOM 3131 C ALA 14 4.764 27.284 11.116 1.00 1.32 ATOM 3132 O ALA 14 4.184 26.433 11.797 1.00 1.32 ATOM 3134 N GLU 15 5.761 28.052 11.561 1.00 1.51 ATOM 3135 CA GLU 15 6.410 28.053 12.879 1.00 1.51 ATOM 3136 CB GLU 15 7.245 29.328 13.011 1.00 1.51 ATOM 3137 CG GLU 15 8.376 29.371 12.008 1.00 1.51 ATOM 3138 CD GLU 15 9.074 30.721 12.039 1.00 1.51 ATOM 3139 OE1 GLU 15 9.523 31.094 13.142 1.00 1.51 ATOM 3140 OE2 GLU 15 9.206 31.388 10.984 1.00 1.51 ATOM 3141 C GLU 15 5.404 28.074 14.030 1.00 1.51 ATOM 3142 O GLU 15 5.523 27.285 14.968 1.00 1.51 ATOM 3144 N THR 16 4.426 28.988 13.943 1.00 1.75 ATOM 3145 CA THR 16 3.369 29.144 14.949 1.00 1.75 ATOM 3146 CB THR 16 2.783 30.567 14.976 1.00 1.75 ATOM 3147 CG2 THR 16 3.787 31.582 15.508 1.00 1.75 ATOM 3148 OG1 THR 16 2.402 31.012 13.697 1.00 1.75 ATOM 3149 C THR 16 2.239 28.118 14.799 1.00 1.75 ATOM 3150 O THR 16 1.649 27.721 15.806 1.00 1.75 ATOM 3153 N GLY 17 1.956 27.626 13.584 1.00 1.91 ATOM 3154 CA GLY 17 0.993 26.549 13.347 1.00 1.91 ATOM 3155 C GLY 17 0.001 26.783 12.199 1.00 1.91 ATOM 3156 O GLY 17 -0.308 27.899 11.795 1.00 1.91 ATOM 3158 N GLN 18 -0.567 25.682 11.693 1.00 1.93 ATOM 3159 CA GLN 18 -1.160 25.602 10.344 1.00 1.93 ATOM 3160 CB GLN 18 -1.058 24.162 9.796 1.00 1.93 ATOM 3161 CG GLN 18 0.295 23.449 10.035 1.00 1.93 ATOM 3162 CD GLN 18 1.526 24.352 9.915 1.00 1.93 ATOM 3163 OE1 GLN 18 1.694 25.101 8.967 1.00 1.93 ATOM 3164 NE2 GLN 18 2.382 24.351 10.916 1.00 1.93 ATOM 3165 C GLN 18 -2.573 26.221 10.175 1.00 1.93 ATOM 3166 O GLN 18 -3.222 26.001 9.158 1.00 1.93 ATOM 3170 N ASN 19 -3.053 27.036 11.122 1.00 2.13 ATOM 3171 CA ASN 19 -4.239 27.903 10.967 1.00 2.13 ATOM 3172 CB ASN 19 -5.134 27.765 12.216 1.00 2.13 ATOM 3173 CG ASN 19 -6.463 28.500 12.090 1.00 2.13 ATOM 3174 OD1 ASN 19 -6.904 28.887 11.023 1.00 2.13 ATOM 3175 ND2 ASN 19 -7.170 28.695 13.181 1.00 2.13 ATOM 3176 C ASN 19 -3.772 29.349 10.674 1.00 2.13 ATOM 3177 O ASN 19 -4.072 30.310 11.394 1.00 2.13 ATOM 3181 N TRP 20 -2.913 29.428 9.652 1.00 2.11 ATOM 3182 CA TRP 20 -1.806 30.373 9.487 1.00 2.11 ATOM 3183 CB TRP 20 -1.389 30.347 8.000 1.00 2.11 ATOM 3184 CG TRP 20 -0.589 29.163 7.523 1.00 2.11 ATOM 3185 CD1 TRP 20 0.105 28.293 8.299 1.00 2.11 ATOM 3186 NE1 TRP 20 0.737 27.356 7.508 1.00 2.11 ATOM 3187 CE2 TRP 20 0.531 27.598 6.170 1.00 2.11 ATOM 3188 CZ2 TRP 20 0.974 26.959 5.002 1.00 2.11 ATOM 3189 CH2 TRP 20 0.600 27.485 3.753 1.00 2.11 ATOM 3190 CZ3 TRP 20 -0.211 28.632 3.692 1.00 2.11 ATOM 3191 CE3 TRP 20 -0.663 29.256 4.872 1.00 2.11 ATOM 3192 CD2 TRP 20 -0.310 28.752 6.145 1.00 2.11 ATOM 3193 C TRP 20 -2.008 31.787 10.040 1.00 2.11 ATOM 3194 O TRP 20 -1.568 32.100 11.145 1.00 2.11 ATOM 3197 N ALA 21 -2.621 32.663 9.248 1.00 1.93 ATOM 3198 CA ALA 21 -2.513 34.099 9.461 1.00 1.93 ATOM 3199 CB ALA 21 -2.991 34.765 8.167 1.00 1.93 ATOM 3200 C ALA 21 -3.247 34.594 10.722 1.00 1.93 ATOM 3201 O ALA 21 -2.762 35.485 11.423 1.00 1.93 ATOM 3203 N SER 22 -4.407 33.998 11.018 1.00 1.72 ATOM 3204 CA SER 22 -5.197 34.247 12.227 1.00 1.72 ATOM 3205 CB SER 22 -6.543 33.516 12.128 1.00 1.72 ATOM 3206 OG SER 22 -7.182 33.811 10.899 1.00 1.72 ATOM 3207 C SER 22 -4.482 33.760 13.491 1.00 1.72 ATOM 3208 O SER 22 -4.412 34.491 14.480 1.00 1.72 ATOM 3211 N LEU 23 -3.908 32.547 13.456 1.00 1.52 ATOM 3212 CA LEU 23 -3.148 32.005 14.585 1.00 1.52 ATOM 3213 CB LEU 23 -2.776 30.542 14.289 1.00 1.52 ATOM 3214 CG LEU 23 -2.126 29.794 15.470 1.00 1.52 ATOM 3215 CD1 LEU 23 -3.110 29.575 16.624 1.00 1.52 ATOM 3216 CD2 LEU 23 -1.662 28.421 14.990 1.00 1.52 ATOM 3217 C LEU 23 -1.904 32.839 14.910 1.00 1.52 ATOM 3218 O LEU 23 -1.696 33.168 16.075 1.00 1.52 ATOM 3220 N ALA 24 -1.133 33.228 13.890 1.00 1.34 ATOM 3221 CA ALA 24 -0.014 34.149 14.042 1.00 1.34 ATOM 3222 CB ALA 24 0.671 34.293 12.686 1.00 1.34 ATOM 3223 C ALA 24 -0.470 35.502 14.624 1.00 1.34 ATOM 3224 O ALA 24 0.141 36.008 15.558 1.00 1.34 ATOM 3226 N ALA 25 -1.574 36.081 14.137 1.00 1.40 ATOM 3227 CA ALA 25 -2.071 37.362 14.654 1.00 1.40 ATOM 3228 CB ALA 25 -3.291 37.781 13.819 1.00 1.40 ATOM 3229 C ALA 25 -2.389 37.331 16.157 1.00 1.40 ATOM 3230 O ALA 25 -2.009 38.239 16.914 1.00 1.40 ATOM 3232 N ASN 26 -3.057 36.253 16.575 1.00 1.63 ATOM 3233 CA ASN 26 -3.408 36.070 17.971 1.00 1.63 ATOM 3234 CB ASN 26 -4.516 35.003 18.075 1.00 1.63 ATOM 3235 CG ASN 26 -5.894 35.605 17.817 1.00 1.63 ATOM 3236 OD1 ASN 26 -6.124 36.344 16.877 1.00 1.63 ATOM 3237 ND2 ASN 26 -6.835 35.384 18.708 1.00 1.63 ATOM 3238 C ASN 26 -2.179 35.791 18.856 1.00 1.63 ATOM 3239 O ASN 26 -2.133 36.324 19.967 1.00 1.63 ATOM 3243 N GLU 27 -1.202 35.015 18.371 1.00 1.74 ATOM 3244 CA GLU 27 0.064 34.680 19.053 1.00 1.74 ATOM 3245 CB GLU 27 0.819 33.601 18.249 1.00 1.74 ATOM 3246 CG GLU 27 2.188 33.177 18.827 1.00 1.74 ATOM 3247 CD GLU 27 3.381 34.073 18.433 1.00 1.74 ATOM 3248 OE1 GLU 27 4.328 34.212 19.242 1.00 1.74 ATOM 3249 OE2 GLU 27 3.416 34.567 17.286 1.00 1.74 ATOM 3250 C GLU 27 0.957 35.901 19.283 1.00 1.74 ATOM 3251 O GLU 27 1.321 36.161 20.429 1.00 1.74 ATOM 3253 N LEU 28 1.204 36.714 18.244 1.00 1.72 ATOM 3254 CA LEU 28 1.861 38.015 18.395 1.00 1.72 ATOM 3255 CB LEU 28 2.088 38.693 17.032 1.00 1.72 ATOM 3256 CG LEU 28 2.880 40.019 17.042 1.00 1.72 ATOM 3257 CD1 LEU 28 4.212 39.953 17.794 1.00 1.72 ATOM 3258 CD2 LEU 28 3.185 40.449 15.605 1.00 1.72 ATOM 3259 C LEU 28 1.103 38.952 19.359 1.00 1.72 ATOM 3260 O LEU 28 1.641 39.967 19.805 1.00 1.72 ATOM 3262 N ARG 29 -0.167 38.638 19.655 1.00 1.91 ATOM 3263 CA ARG 29 -1.158 39.567 20.193 1.00 1.91 ATOM 3264 CB ARG 29 -1.071 39.576 21.734 1.00 1.91 ATOM 3265 CG ARG 29 -2.146 40.376 22.499 1.00 1.91 ATOM 3266 CD ARG 29 -3.546 40.417 21.863 1.00 1.91 ATOM 3267 NE ARG 29 -4.016 39.089 21.440 1.00 1.91 ATOM 3268 CZ ARG 29 -5.099 38.850 20.726 1.00 1.91 ATOM 3269 NH1 ARG 29 -5.321 37.657 20.284 1.00 1.91 ATOM 3270 NH2 ARG 29 -5.982 39.760 20.447 1.00 1.91 ATOM 3271 C ARG 29 -1.124 40.926 19.488 1.00 1.91 ATOM 3272 O ARG 29 -1.304 41.976 20.111 1.00 1.91 ATOM 3279 N VAL 30 -1.039 40.895 18.150 1.00 1.95 ATOM 3280 CA VAL 30 -1.772 41.931 17.412 1.00 1.95 ATOM 3281 CB VAL 30 -1.338 42.089 15.944 1.00 1.95 ATOM 3282 CG1 VAL 30 0.070 42.682 15.840 1.00 1.95 ATOM 3283 CG2 VAL 30 -1.402 40.795 15.144 1.00 1.95 ATOM 3284 C VAL 30 -3.280 41.662 17.602 1.00 1.95 ATOM 3285 O VAL 30 -3.685 40.651 18.181 1.00 1.95 ATOM 3287 N THR 31 -4.157 42.562 17.153 1.00 2.11 ATOM 3288 CA THR 31 -5.588 42.225 17.047 1.00 2.11 ATOM 3289 CB THR 31 -6.406 43.412 16.500 1.00 2.11 ATOM 3290 CG2 THR 31 -7.823 43.487 17.066 1.00 2.11 ATOM 3291 OG1 THR 31 -5.810 44.663 16.767 1.00 2.11 ATOM 3292 C THR 31 -5.806 41.015 16.124 1.00 2.11 ATOM 3293 O THR 31 -4.926 40.704 15.326 1.00 2.11 ATOM 3296 N GLU 32 -7.006 40.425 16.177 1.00 2.33 ATOM 3297 CA GLU 32 -7.630 39.354 15.364 1.00 2.33 ATOM 3298 CB GLU 32 -9.035 39.068 15.963 1.00 2.33 ATOM 3299 CG GLU 32 -9.096 38.230 17.249 1.00 2.33 ATOM 3300 CD GLU 32 -8.356 38.809 18.458 1.00 2.33 ATOM 3301 OE1 GLU 32 -7.869 38.006 19.285 1.00 2.33 ATOM 3302 OE2 GLU 32 -8.218 40.049 18.587 1.00 2.33 ATOM 3303 C GLU 32 -7.738 39.637 13.835 1.00 2.33 ATOM 3304 O GLU 32 -8.791 39.487 13.209 1.00 2.33 ATOM 3306 N ARG 33 -6.676 40.142 13.210 1.00 2.37 ATOM 3307 CA ARG 33 -6.620 40.751 11.884 1.00 2.37 ATOM 3308 CB ARG 33 -6.678 42.290 11.996 1.00 2.37 ATOM 3309 CG ARG 33 -7.821 42.859 12.866 1.00 2.37 ATOM 3310 CD ARG 33 -9.241 42.576 12.353 1.00 2.37 ATOM 3311 NE ARG 33 -10.258 42.948 13.364 1.00 2.37 ATOM 3312 CZ ARG 33 -11.099 42.147 14.008 1.00 2.37 ATOM 3313 NH1 ARG 33 -11.978 42.659 14.822 1.00 2.37 ATOM 3314 NH2 ARG 33 -11.112 40.851 13.887 1.00 2.37 ATOM 3315 C ARG 33 -5.332 40.248 11.194 1.00 2.37 ATOM 3316 O ARG 33 -4.229 40.790 11.385 1.00 2.37 ATOM 3323 N PRO 34 -5.443 39.210 10.345 1.00 2.41 ATOM 3324 CD PRO 34 -6.637 38.434 10.021 1.00 2.41 ATOM 3325 CG PRO 34 -6.317 37.713 8.717 1.00 2.41 ATOM 3326 CB PRO 34 -4.810 37.513 8.805 1.00 2.41 ATOM 3327 CA PRO 34 -4.295 38.727 9.581 1.00 2.41 ATOM 3328 C PRO 34 -3.692 39.810 8.672 1.00 2.41 ATOM 3329 O PRO 34 -2.544 39.683 8.261 1.00 2.41 ATOM 3330 N PHE 35 -4.413 40.913 8.412 1.00 2.53 ATOM 3331 CA PHE 35 -3.866 42.137 7.814 1.00 2.53 ATOM 3332 CB PHE 35 -5.012 43.145 7.625 1.00 2.53 ATOM 3333 CG PHE 35 -4.725 44.227 6.599 1.00 2.53 ATOM 3334 CD1 PHE 35 -5.162 44.067 5.269 1.00 2.53 ATOM 3335 CE1 PHE 35 -4.912 45.071 4.316 1.00 2.53 ATOM 3336 CZ PHE 35 -4.218 46.236 4.688 1.00 2.53 ATOM 3337 CE2 PHE 35 -3.775 46.396 6.012 1.00 2.53 ATOM 3338 CD2 PHE 35 -4.031 45.396 6.966 1.00 2.53 ATOM 3339 C PHE 35 -2.699 42.761 8.617 1.00 2.53 ATOM 3340 O PHE 35 -1.712 43.223 8.041 1.00 2.53 ATOM 3342 N TRP 36 -2.755 42.728 9.955 1.00 2.76 ATOM 3343 CA TRP 36 -1.672 43.203 10.823 1.00 2.76 ATOM 3344 CB TRP 36 -2.132 43.245 12.286 1.00 2.76 ATOM 3345 CG TRP 36 -3.261 44.161 12.667 1.00 2.76 ATOM 3346 CD1 TRP 36 -3.993 44.004 13.792 1.00 2.76 ATOM 3347 NE1 TRP 36 -4.890 45.040 13.927 1.00 2.76 ATOM 3348 CE2 TRP 36 -4.831 45.898 12.852 1.00 2.76 ATOM 3349 CZ2 TRP 36 -5.550 47.058 12.526 1.00 2.76 ATOM 3350 CH2 TRP 36 -5.244 47.737 11.335 1.00 2.76 ATOM 3351 CZ3 TRP 36 -4.221 47.257 10.499 1.00 2.76 ATOM 3352 CE3 TRP 36 -3.499 46.098 10.841 1.00 2.76 ATOM 3353 CD2 TRP 36 -3.787 45.375 12.024 1.00 2.76 ATOM 3354 C TRP 36 -0.429 42.327 10.688 1.00 2.76 ATOM 3355 O TRP 36 0.671 42.858 10.488 1.00 2.76 ATOM 3358 N ILE 37 -0.584 40.992 10.708 1.00 2.95 ATOM 3359 CA ILE 37 0.620 40.155 10.467 1.00 2.95 ATOM 3360 CB ILE 37 0.432 38.671 10.804 1.00 2.95 ATOM 3361 CG2 ILE 37 1.739 37.903 10.538 1.00 2.95 ATOM 3362 CG1 ILE 37 0.036 38.466 12.269 1.00 2.95 ATOM 3363 CD1 ILE 37 0.971 39.121 13.297 1.00 2.95 ATOM 3364 C ILE 37 1.167 40.333 9.037 1.00 2.95 ATOM 3365 O ILE 37 2.378 40.423 8.849 1.00 2.95 ATOM 3367 N SER 38 0.292 40.481 8.042 1.00 3.10 ATOM 3368 CA SER 38 0.631 40.843 6.652 1.00 3.10 ATOM 3369 CB SER 38 -0.625 40.765 5.772 1.00 3.10 ATOM 3370 OG SER 38 -1.262 39.510 5.875 1.00 3.10 ATOM 3371 C SER 38 1.208 42.266 6.486 1.00 3.10 ATOM 3372 O SER 38 1.576 42.691 5.385 1.00 3.10 ATOM 3375 N SER 39 1.250 43.054 7.561 1.00 3.32 ATOM 3376 CA SER 39 1.976 44.323 7.620 1.00 3.32 ATOM 3377 CB SER 39 1.197 45.345 8.458 1.00 3.32 ATOM 3378 OG SER 39 -0.107 45.537 7.943 1.00 3.32 ATOM 3379 C SER 39 3.386 44.118 8.198 1.00 3.32 ATOM 3380 O SER 39 4.387 44.547 7.608 1.00 3.32 ATOM 3383 N PHE 40 3.480 43.440 9.347 1.00 3.37 ATOM 3384 CA PHE 40 4.781 43.200 9.984 1.00 3.37 ATOM 3385 CB PHE 40 4.588 42.680 11.421 1.00 3.37 ATOM 3386 CG PHE 40 4.306 43.773 12.455 1.00 3.37 ATOM 3387 CD1 PHE 40 3.200 44.640 12.326 1.00 3.37 ATOM 3388 CE1 PHE 40 2.957 45.642 13.286 1.00 3.37 ATOM 3389 CZ PHE 40 3.797 45.766 14.408 1.00 3.37 ATOM 3390 CE2 PHE 40 4.891 44.897 14.555 1.00 3.37 ATOM 3391 CD2 PHE 40 5.148 43.919 13.579 1.00 3.37 ATOM 3392 C PHE 40 5.694 42.324 9.094 1.00 3.37 ATOM 3393 O PHE 40 6.705 42.792 8.548 1.00 3.37 ATOM 3395 N ILE 41 5.268 41.102 8.785 1.00 3.64 ATOM 3396 CA ILE 41 5.828 40.436 7.615 1.00 3.64 ATOM 3397 CB ILE 41 5.356 38.984 7.436 1.00 3.64 ATOM 3398 CG2 ILE 41 6.366 38.323 6.457 1.00 3.64 ATOM 3399 CG1 ILE 41 5.120 38.208 8.761 1.00 3.64 ATOM 3400 CD1 ILE 41 6.373 37.829 9.546 1.00 3.64 ATOM 3401 C ILE 41 5.438 41.252 6.378 1.00 3.64 ATOM 3402 O ILE 41 4.321 41.746 6.246 1.00 3.64 ATOM 3404 N GLY 42 6.398 41.448 5.495 1.00 3.87 ATOM 3405 CA GLY 42 6.318 42.346 4.367 1.00 3.87 ATOM 3406 C GLY 42 6.938 43.711 4.629 1.00 3.87 ATOM 3407 O GLY 42 7.440 44.269 3.655 1.00 3.87 ATOM 3409 N ARG 43 6.961 44.253 5.869 1.00 3.60 ATOM 3410 CA ARG 43 7.731 45.490 6.133 1.00 3.60 ATOM 3411 CB ARG 43 6.864 46.607 6.770 1.00 3.60 ATOM 3412 CG ARG 43 5.549 47.093 6.097 1.00 3.60 ATOM 3413 CD ARG 43 5.316 46.858 4.591 1.00 3.60 ATOM 3414 NE ARG 43 3.890 46.597 4.261 1.00 3.60 ATOM 3415 CZ ARG 43 3.261 45.432 4.351 1.00 3.60 ATOM 3416 NH1 ARG 43 2.032 45.269 3.958 1.00 3.60 ATOM 3417 NH2 ARG 43 3.801 44.385 4.881 1.00 3.60 ATOM 3418 C ARG 43 9.009 45.216 6.937 1.00 3.60 ATOM 3419 O ARG 43 8.950 45.202 8.154 1.00 3.60 ATOM 3426 N SER 44 10.142 45.070 6.241 1.00 3.32 ATOM 3427 CA SER 44 11.546 44.917 6.705 1.00 3.32 ATOM 3428 CB SER 44 12.405 44.760 5.446 1.00 3.32 ATOM 3429 OG SER 44 12.290 45.883 4.596 1.00 3.32 ATOM 3430 C SER 44 12.088 46.087 7.586 1.00 3.32 ATOM 3431 O SER 44 13.180 46.585 7.324 1.00 3.32 ATOM 3434 N LYS 45 11.304 46.607 8.546 1.00 2.89 ATOM 3435 CA LYS 45 11.381 47.987 9.102 1.00 2.89 ATOM 3436 CB LYS 45 10.501 48.128 10.356 1.00 2.89 ATOM 3437 CG LYS 45 8.990 47.939 10.210 1.00 2.89 ATOM 3438 CD LYS 45 8.370 47.911 11.616 1.00 2.89 ATOM 3439 CE LYS 45 6.937 47.375 11.577 1.00 2.89 ATOM 3440 NZ LYS 45 6.476 47.039 12.943 1.00 2.89 ATOM 3441 C LYS 45 12.763 48.542 9.474 1.00 2.89 ATOM 3442 O LYS 45 13.169 49.592 8.984 1.00 2.89 TER END