####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS365_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS365_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 11 - 41 4.93 8.91 LONGEST_CONTINUOUS_SEGMENT: 31 12 - 42 4.98 8.96 LCS_AVERAGE: 61.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 19 - 36 1.89 12.50 LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.83 12.63 LCS_AVERAGE: 27.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 20 - 34 0.95 13.45 LCS_AVERAGE: 19.32 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 0 3 4 5 8 11 15 17 19 19 20 23 26 27 28 28 31 32 34 34 LCS_GDT V 3 V 3 4 6 14 1 3 4 5 6 6 15 17 19 19 20 23 26 27 28 28 31 32 34 35 LCS_GDT Q 4 Q 4 4 6 14 1 4 4 6 8 11 15 17 19 19 20 23 26 27 28 28 31 32 34 35 LCS_GDT G 5 G 5 4 6 14 0 4 4 6 8 11 15 17 19 19 20 23 26 27 28 28 31 32 34 35 LCS_GDT P 6 P 6 4 6 19 2 4 4 6 8 11 15 17 19 19 20 23 26 27 28 28 30 31 34 36 LCS_GDT W 7 W 7 4 6 20 4 4 4 6 8 11 15 17 19 19 20 23 26 27 28 32 32 34 35 37 LCS_GDT V 8 V 8 4 4 20 4 4 4 4 4 4 9 12 14 16 18 20 22 26 28 32 33 34 36 37 LCS_GDT G 9 G 9 4 11 20 4 4 4 9 11 11 13 15 18 20 23 26 30 30 32 33 34 35 36 37 LCS_GDT S 10 S 10 4 11 20 4 4 8 10 11 11 13 15 18 20 23 26 30 30 32 33 34 35 36 37 LCS_GDT S 11 S 11 5 11 31 4 4 8 10 11 11 13 14 15 18 23 26 30 30 32 33 34 35 36 37 LCS_GDT Y 12 Y 12 7 11 31 4 4 7 10 11 11 13 14 15 18 20 26 30 30 32 33 34 35 36 37 LCS_GDT V 13 V 13 7 11 31 4 6 7 10 11 11 13 16 19 21 24 26 30 30 32 33 34 35 36 37 LCS_GDT A 14 A 14 7 11 31 4 6 8 10 11 11 13 16 19 21 24 26 30 30 32 33 34 35 36 37 LCS_GDT E 15 E 15 7 11 31 4 6 8 10 11 11 13 14 16 20 24 26 30 30 32 33 34 35 36 37 LCS_GDT T 16 T 16 7 11 31 4 6 8 10 11 11 13 14 16 19 23 26 30 30 32 33 34 35 36 37 LCS_GDT G 17 G 17 7 11 31 4 6 8 10 11 11 13 14 16 21 24 26 30 30 32 33 34 35 36 37 LCS_GDT Q 18 Q 18 7 11 31 4 6 8 10 11 11 13 14 16 21 24 26 30 30 32 33 34 35 36 37 LCS_GDT N 19 N 19 7 18 31 3 5 8 10 11 14 16 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT W 20 W 20 15 18 31 7 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT A 21 A 21 15 18 31 10 13 14 14 15 17 17 19 22 22 23 26 30 30 32 33 34 35 36 37 LCS_GDT S 22 S 22 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT L 23 L 23 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT A 24 A 24 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT A 25 A 25 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT N 26 N 26 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT E 27 E 27 15 18 31 10 13 14 14 15 17 17 19 22 22 23 26 27 28 32 33 34 35 36 37 LCS_GDT L 28 L 28 15 18 31 10 13 14 14 15 17 17 19 22 22 23 25 27 28 30 32 34 35 36 37 LCS_GDT R 29 R 29 15 18 31 10 13 14 14 15 17 17 19 22 22 23 26 27 28 31 33 34 35 36 37 LCS_GDT V 30 V 30 15 18 31 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT T 31 T 31 15 18 31 4 10 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT E 32 E 32 15 18 31 7 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT R 33 R 33 15 18 31 3 4 4 5 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT P 34 P 34 15 18 31 5 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT F 35 F 35 4 18 31 3 4 4 5 12 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT W 36 W 36 6 18 31 4 4 7 12 15 17 17 19 22 22 24 26 29 30 32 33 34 35 36 37 LCS_GDT I 37 I 37 6 18 31 4 5 7 9 12 16 17 19 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT S 38 S 38 6 7 31 4 5 7 9 10 11 15 18 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT S 39 S 39 6 7 31 4 5 7 9 10 11 15 18 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT F 40 F 40 6 7 31 4 5 7 9 10 11 15 18 22 22 24 26 30 30 32 33 34 35 36 37 LCS_GDT I 41 I 41 6 7 31 4 5 7 8 10 11 13 16 19 21 24 26 30 30 32 33 34 35 36 37 LCS_GDT G 42 G 42 3 5 31 3 4 4 4 5 6 8 10 13 17 22 26 30 30 32 33 34 35 36 37 LCS_GDT R 43 R 43 3 5 25 3 4 4 4 8 10 12 14 15 18 20 26 28 30 31 32 33 35 36 37 LCS_GDT S 44 S 44 3 5 14 0 3 3 4 5 6 11 14 15 17 20 22 23 29 30 32 32 33 35 36 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 5 10 13 14 14 16 18 19 22 23 25 25 29 32 33 34 LCS_AVERAGE LCS_A: 36.29 ( 19.32 27.79 61.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 14 15 17 17 19 22 22 24 26 30 30 32 33 34 35 36 37 GDT PERCENT_AT 22.73 29.55 31.82 31.82 34.09 38.64 38.64 43.18 50.00 50.00 54.55 59.09 68.18 68.18 72.73 75.00 77.27 79.55 81.82 84.09 GDT RMS_LOCAL 0.30 0.60 0.70 0.70 0.93 1.35 1.35 2.16 3.05 3.05 3.84 4.06 4.74 4.68 4.98 5.14 5.28 5.51 5.87 6.17 GDT RMS_ALL_AT 13.65 13.41 13.36 13.36 13.21 13.20 13.20 12.06 10.65 10.65 9.14 9.24 8.55 8.64 8.50 8.48 8.47 8.43 8.26 8.13 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.509 0 0.231 0.277 15.014 0.000 0.000 - LGA V 3 V 3 14.907 0 0.586 0.477 17.456 0.000 0.000 16.016 LGA Q 4 Q 4 14.609 0 0.606 1.579 15.725 0.000 0.000 13.819 LGA G 5 G 5 15.339 0 0.563 0.563 18.289 0.000 0.000 - LGA P 6 P 6 18.394 0 0.067 0.381 19.803 0.000 0.000 19.102 LGA W 7 W 7 18.067 0 0.528 1.342 24.942 0.000 0.000 23.882 LGA V 8 V 8 19.795 0 0.024 0.209 22.745 0.000 0.000 21.762 LGA G 9 G 9 15.259 0 0.269 0.269 16.597 0.000 0.000 - LGA S 10 S 10 14.867 0 0.332 0.370 18.763 0.000 0.000 18.763 LGA S 11 S 11 18.261 0 0.448 0.829 20.922 0.000 0.000 20.922 LGA Y 12 Y 12 16.122 0 0.065 1.326 17.233 0.000 0.000 16.975 LGA V 13 V 13 12.083 0 0.112 1.158 13.279 0.000 0.000 13.175 LGA A 14 A 14 13.358 0 0.027 0.027 14.446 0.000 0.000 - LGA E 15 E 15 16.495 0 0.032 1.294 23.764 0.000 0.000 23.764 LGA T 16 T 16 14.482 0 0.045 1.011 14.768 0.000 0.000 14.062 LGA G 17 G 17 10.798 0 0.050 0.050 12.036 0.000 0.000 - LGA Q 18 Q 18 8.946 0 0.629 1.492 13.053 0.000 0.000 13.053 LGA N 19 N 19 4.827 0 0.068 0.745 9.366 12.727 6.364 9.366 LGA W 20 W 20 2.174 0 0.627 1.365 13.956 52.273 15.065 13.956 LGA A 21 A 21 2.303 0 0.041 0.038 2.868 44.545 41.091 - LGA S 22 S 22 1.791 0 0.026 0.627 3.601 55.000 44.848 3.601 LGA L 23 L 23 0.720 0 0.077 0.131 1.723 82.273 74.091 1.723 LGA A 24 A 24 0.960 0 0.013 0.016 1.415 81.818 78.545 - LGA A 25 A 25 0.555 0 0.015 0.022 0.858 86.364 85.455 - LGA N 26 N 26 0.692 0 0.023 0.497 2.314 82.273 72.500 1.027 LGA E 27 E 27 1.078 0 0.084 0.840 3.230 65.909 58.990 3.230 LGA L 28 L 28 1.188 0 0.020 0.050 2.116 73.636 60.909 2.055 LGA R 29 R 29 0.642 0 0.026 1.449 7.948 86.364 45.620 7.083 LGA V 30 V 30 0.291 0 0.039 0.070 0.777 90.909 94.805 0.366 LGA T 31 T 31 1.013 0 0.053 1.077 2.491 73.636 64.156 1.984 LGA E 32 E 32 0.403 0 0.399 1.461 6.597 86.818 54.545 6.597 LGA R 33 R 33 3.461 0 0.625 0.912 6.394 12.727 16.694 2.824 LGA P 34 P 34 1.154 0 0.609 0.604 4.150 37.273 37.143 2.517 LGA F 35 F 35 2.721 0 0.585 1.412 11.478 45.455 16.694 11.478 LGA W 36 W 36 2.079 0 0.595 1.234 12.582 46.364 13.377 12.582 LGA I 37 I 37 4.572 0 0.098 0.958 7.522 3.182 1.591 6.974 LGA S 38 S 38 8.494 0 0.130 0.632 10.064 0.000 0.000 9.457 LGA S 39 S 39 7.473 0 0.058 0.655 8.928 0.000 0.000 7.281 LGA F 40 F 40 7.785 0 0.177 0.929 11.029 0.000 0.992 5.172 LGA I 41 I 41 12.781 0 0.605 0.522 16.828 0.000 0.000 9.064 LGA G 42 G 42 18.073 0 0.039 0.039 21.311 0.000 0.000 - LGA R 43 R 43 20.364 0 0.594 1.188 22.088 0.000 0.000 19.929 LGA S 44 S 44 23.610 0 0.584 0.915 26.499 0.000 0.000 24.632 LGA K 45 K 45 26.432 0 0.634 1.224 29.115 0.000 0.000 22.972 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.958 7.943 9.399 25.444 20.079 11.117 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.16 44.886 40.679 0.839 LGA_LOCAL RMSD: 2.164 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.059 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.958 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.850564 * X + -0.299156 * Y + 0.432488 * Z + 8.935365 Y_new = -0.496489 * X + -0.185776 * Y + 0.847931 * Z + 28.181820 Z_new = -0.173318 * X + -0.935945 * Y + -0.306542 * Z + 13.628295 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.528360 0.174198 -1.887307 [DEG: -30.2728 9.9808 -108.1347 ] ZXZ: 2.669937 1.882354 -2.958487 [DEG: 152.9761 107.8510 -169.5088 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS365_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS365_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.16 40.679 7.96 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS365_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 2I7U_A ATOM 9 N ALA 2 1.763 25.873 15.444 1.00 0.00 ATOM 10 CA ALA 2 1.879 25.906 14.003 1.00 0.00 ATOM 11 C ALA 2 0.998 24.919 13.240 1.00 0.00 ATOM 12 O ALA 2 1.240 23.716 13.225 1.00 0.00 ATOM 13 CB ALA 2 3.353 25.721 13.591 1.00 0.00 ATOM 14 N VAL 3 -0.037 25.441 12.546 1.00 0.00 ATOM 15 CA VAL 3 -0.889 24.663 11.650 1.00 0.00 ATOM 16 C VAL 3 -0.430 24.910 10.210 1.00 0.00 ATOM 17 O VAL 3 -1.006 24.433 9.232 1.00 0.00 ATOM 18 CB VAL 3 -2.373 25.009 11.826 1.00 0.00 ATOM 19 CG1 VAL 3 -3.270 23.932 11.181 1.00 0.00 ATOM 20 CG2 VAL 3 -2.722 25.091 13.327 1.00 0.00 ATOM 21 N GLN 4 0.653 25.703 10.054 1.00 0.00 ATOM 22 CA GLN 4 1.423 25.919 8.837 1.00 0.00 ATOM 23 C GLN 4 0.767 26.869 7.852 1.00 0.00 ATOM 24 O GLN 4 1.393 27.798 7.349 1.00 0.00 ATOM 25 CB GLN 4 1.898 24.608 8.152 1.00 0.00 ATOM 26 CG GLN 4 2.846 24.800 6.941 1.00 0.00 ATOM 27 CD GLN 4 4.149 25.504 7.327 1.00 0.00 ATOM 28 OE1 GLN 4 5.092 24.887 7.819 1.00 0.00 ATOM 29 NE2 GLN 4 4.216 26.837 7.105 1.00 0.00 ATOM 30 N GLY 5 -0.527 26.672 7.558 1.00 0.00 ATOM 31 CA GLY 5 -1.236 27.554 6.647 1.00 0.00 ATOM 32 C GLY 5 -2.667 27.182 6.356 1.00 0.00 ATOM 33 O GLY 5 -3.519 28.052 6.533 1.00 0.00 ATOM 34 N PRO 6 -3.036 25.967 5.928 1.00 0.00 ATOM 35 CA PRO 6 -4.347 25.772 5.304 1.00 0.00 ATOM 36 C PRO 6 -5.489 25.672 6.292 1.00 0.00 ATOM 37 O PRO 6 -6.612 26.007 5.924 1.00 0.00 ATOM 38 CB PRO 6 -4.218 24.436 4.545 1.00 0.00 ATOM 39 CG PRO 6 -2.720 24.277 4.288 1.00 0.00 ATOM 40 CD PRO 6 -2.089 24.918 5.519 1.00 0.00 ATOM 41 N TRP 7 -5.217 25.150 7.506 1.00 0.00 ATOM 42 CA TRP 7 -6.193 24.714 8.499 1.00 0.00 ATOM 43 C TRP 7 -7.366 23.893 7.931 1.00 0.00 ATOM 44 O TRP 7 -7.167 23.094 7.015 1.00 0.00 ATOM 45 CB TRP 7 -6.585 25.875 9.452 1.00 0.00 ATOM 46 CG TRP 7 -7.062 25.511 10.854 1.00 0.00 ATOM 47 CD1 TRP 7 -7.012 24.320 11.530 1.00 0.00 ATOM 48 CD2 TRP 7 -7.695 26.451 11.741 1.00 0.00 ATOM 49 NE1 TRP 7 -7.559 24.458 12.787 1.00 0.00 ATOM 50 CE2 TRP 7 -7.997 25.756 12.932 1.00 0.00 ATOM 51 CZ3 TRP 7 -8.707 28.428 12.642 1.00 0.00 ATOM 52 CZ2 TRP 7 -8.639 26.391 13.985 1.00 0.00 ATOM 53 CH2 TRP 7 -9.004 27.736 13.826 1.00 0.00 ATOM 54 CE3 TRP 7 -8.034 27.793 11.587 1.00 0.00 ATOM 55 N VAL 8 -8.603 24.012 8.462 1.00 0.00 ATOM 56 CA VAL 8 -9.722 23.195 7.993 1.00 0.00 ATOM 57 C VAL 8 -10.280 23.727 6.673 1.00 0.00 ATOM 58 O VAL 8 -10.836 22.988 5.860 1.00 0.00 ATOM 59 CB VAL 8 -10.828 23.065 9.046 1.00 0.00 ATOM 60 CG1 VAL 8 -11.876 22.015 8.627 1.00 0.00 ATOM 61 CG2 VAL 8 -10.209 22.668 10.402 1.00 0.00 ATOM 62 N GLY 9 -10.080 25.029 6.374 1.00 0.00 ATOM 63 CA GLY 9 -10.588 25.674 5.166 1.00 0.00 ATOM 64 C GLY 9 -9.825 25.350 3.910 1.00 0.00 ATOM 65 O GLY 9 -10.272 25.689 2.818 1.00 0.00 ATOM 66 N SER 10 -8.664 24.672 4.056 1.00 0.00 ATOM 67 CA SER 10 -8.079 23.696 3.130 1.00 0.00 ATOM 68 C SER 10 -8.121 23.980 1.631 1.00 0.00 ATOM 69 O SER 10 -8.378 23.109 0.805 1.00 0.00 ATOM 70 CB SER 10 -8.551 22.244 3.440 1.00 0.00 ATOM 71 OG SER 10 -9.971 22.103 3.395 1.00 0.00 ATOM 72 N SER 11 -7.819 25.225 1.227 1.00 0.00 ATOM 73 CA SER 11 -8.044 25.669 -0.140 1.00 0.00 ATOM 74 C SER 11 -6.984 26.671 -0.546 1.00 0.00 ATOM 75 O SER 11 -5.809 26.512 -0.235 1.00 0.00 ATOM 76 CB SER 11 -9.469 26.265 -0.299 1.00 0.00 ATOM 77 OG SER 11 -9.712 27.324 0.629 1.00 0.00 ATOM 78 N TYR 12 -7.360 27.770 -1.230 1.00 0.00 ATOM 79 CA TYR 12 -6.454 28.794 -1.727 1.00 0.00 ATOM 80 C TYR 12 -5.834 29.614 -0.607 1.00 0.00 ATOM 81 O TYR 12 -4.795 30.255 -0.751 1.00 0.00 ATOM 82 CB TYR 12 -7.211 29.769 -2.641 1.00 0.00 ATOM 83 CG TYR 12 -7.760 29.071 -3.849 1.00 0.00 ATOM 84 CD1 TYR 12 -9.139 28.837 -3.982 1.00 0.00 ATOM 85 CD2 TYR 12 -6.902 28.729 -4.908 1.00 0.00 ATOM 86 CE1 TYR 12 -9.657 28.319 -5.175 1.00 0.00 ATOM 87 CE2 TYR 12 -7.419 28.203 -6.099 1.00 0.00 ATOM 88 CZ TYR 12 -8.797 28.020 -6.236 1.00 0.00 ATOM 89 OH TYR 12 -9.326 27.590 -7.464 1.00 0.00 ATOM 90 N VAL 13 -6.427 29.519 0.596 1.00 0.00 ATOM 91 CA VAL 13 -5.868 30.011 1.838 1.00 0.00 ATOM 92 C VAL 13 -4.525 29.366 2.170 1.00 0.00 ATOM 93 O VAL 13 -3.698 29.954 2.862 1.00 0.00 ATOM 94 CB VAL 13 -6.846 29.829 2.992 1.00 0.00 ATOM 95 CG1 VAL 13 -8.103 30.675 2.701 1.00 0.00 ATOM 96 CG2 VAL 13 -7.223 28.346 3.203 1.00 0.00 ATOM 97 N ALA 14 -4.249 28.152 1.636 1.00 0.00 ATOM 98 CA ALA 14 -2.965 27.486 1.694 1.00 0.00 ATOM 99 C ALA 14 -1.839 28.251 1.014 1.00 0.00 ATOM 100 O ALA 14 -0.731 28.297 1.538 1.00 0.00 ATOM 101 CB ALA 14 -3.065 26.094 1.044 1.00 0.00 ATOM 102 N GLU 15 -2.109 28.895 -0.150 1.00 0.00 ATOM 103 CA GLU 15 -1.143 29.664 -0.928 1.00 0.00 ATOM 104 C GLU 15 -0.575 30.824 -0.128 1.00 0.00 ATOM 105 O GLU 15 0.616 31.119 -0.135 1.00 0.00 ATOM 106 CB GLU 15 -1.821 30.293 -2.182 1.00 0.00 ATOM 107 CG GLU 15 -2.613 29.320 -3.090 1.00 0.00 ATOM 108 CD GLU 15 -3.396 30.070 -4.172 1.00 0.00 ATOM 109 OE1 GLU 15 -4.142 31.025 -3.816 1.00 0.00 ATOM 110 OE2 GLU 15 -3.290 29.683 -5.358 1.00 0.00 ATOM 111 N THR 16 -1.477 31.504 0.598 1.00 0.00 ATOM 112 CA THR 16 -1.203 32.678 1.411 1.00 0.00 ATOM 113 C THR 16 -0.709 32.298 2.793 1.00 0.00 ATOM 114 O THR 16 -0.094 33.083 3.508 1.00 0.00 ATOM 115 CB THR 16 -2.499 33.463 1.597 1.00 0.00 ATOM 116 CG2 THR 16 -2.254 34.881 2.125 1.00 0.00 ATOM 117 OG1 THR 16 -3.168 33.594 0.353 1.00 0.00 ATOM 118 N GLY 17 -0.994 31.054 3.233 1.00 0.00 ATOM 119 CA GLY 17 -0.769 30.618 4.607 1.00 0.00 ATOM 120 C GLY 17 -1.827 31.112 5.568 1.00 0.00 ATOM 121 O GLY 17 -1.670 31.031 6.784 1.00 0.00 ATOM 122 N GLN 18 -2.923 31.685 5.035 1.00 0.00 ATOM 123 CA GLN 18 -3.776 32.628 5.727 1.00 0.00 ATOM 124 C GLN 18 -4.507 32.115 6.948 1.00 0.00 ATOM 125 O GLN 18 -4.584 32.805 7.960 1.00 0.00 ATOM 126 CB GLN 18 -4.801 33.298 4.777 1.00 0.00 ATOM 127 CG GLN 18 -5.562 34.497 5.401 1.00 0.00 ATOM 128 CD GLN 18 -4.588 35.562 5.911 1.00 0.00 ATOM 129 OE1 GLN 18 -3.870 36.193 5.137 1.00 0.00 ATOM 130 NE2 GLN 18 -4.535 35.778 7.245 1.00 0.00 ATOM 131 N ASN 19 -5.078 30.898 6.918 1.00 0.00 ATOM 132 CA ASN 19 -5.886 30.419 8.031 1.00 0.00 ATOM 133 C ASN 19 -5.053 30.183 9.285 1.00 0.00 ATOM 134 O ASN 19 -5.445 30.588 10.380 1.00 0.00 ATOM 135 CB ASN 19 -6.760 29.198 7.654 1.00 0.00 ATOM 136 CG ASN 19 -7.866 29.638 6.695 1.00 0.00 ATOM 137 OD1 ASN 19 -7.833 30.711 6.088 1.00 0.00 ATOM 138 ND2 ASN 19 -8.914 28.802 6.556 1.00 0.00 ATOM 139 N TRP 20 -3.835 29.605 9.158 1.00 0.00 ATOM 140 CA TRP 20 -2.877 29.668 10.253 1.00 0.00 ATOM 141 C TRP 20 -2.340 31.072 10.516 1.00 0.00 ATOM 142 O TRP 20 -2.172 31.440 11.668 1.00 0.00 ATOM 143 CB TRP 20 -1.693 28.667 10.176 1.00 0.00 ATOM 144 CG TRP 20 -0.862 28.649 11.466 1.00 0.00 ATOM 145 CD1 TRP 20 -1.308 28.521 12.757 1.00 0.00 ATOM 146 CD2 TRP 20 0.513 29.064 11.557 1.00 0.00 ATOM 147 CE2 TRP 20 0.819 29.175 12.932 1.00 0.00 ATOM 148 NE1 TRP 20 -0.303 28.832 13.647 1.00 0.00 ATOM 149 CE3 TRP 20 1.456 29.383 10.583 1.00 0.00 ATOM 150 CZ3 TRP 20 2.728 29.790 11.010 1.00 0.00 ATOM 151 CZ2 TRP 20 2.076 29.588 13.353 1.00 0.00 ATOM 152 CH2 TRP 20 3.035 29.891 12.376 1.00 0.00 ATOM 153 N ALA 21 -2.069 31.917 9.500 1.00 0.00 ATOM 154 CA ALA 21 -1.585 33.274 9.721 1.00 0.00 ATOM 155 C ALA 21 -2.524 34.128 10.574 1.00 0.00 ATOM 156 O ALA 21 -2.097 34.887 11.440 1.00 0.00 ATOM 157 CB ALA 21 -1.317 33.980 8.381 1.00 0.00 ATOM 158 N SER 22 -3.848 33.969 10.387 1.00 0.00 ATOM 159 CA SER 22 -4.885 34.525 11.242 1.00 0.00 ATOM 160 C SER 22 -4.803 34.046 12.685 1.00 0.00 ATOM 161 O SER 22 -4.943 34.835 13.617 1.00 0.00 ATOM 162 CB SER 22 -6.299 34.170 10.715 1.00 0.00 ATOM 163 OG SER 22 -6.512 34.745 9.425 1.00 0.00 ATOM 164 N LEU 23 -4.544 32.740 12.929 1.00 0.00 ATOM 165 CA LEU 23 -4.240 32.232 14.261 1.00 0.00 ATOM 166 C LEU 23 -2.932 32.775 14.816 1.00 0.00 ATOM 167 O LEU 23 -2.888 33.265 15.940 1.00 0.00 ATOM 168 CB LEU 23 -4.143 30.686 14.280 1.00 0.00 ATOM 169 CG LEU 23 -5.469 29.944 14.032 1.00 0.00 ATOM 170 CD1 LEU 23 -5.201 28.438 13.888 1.00 0.00 ATOM 171 CD2 LEU 23 -6.480 30.199 15.161 1.00 0.00 ATOM 172 N ALA 24 -1.856 32.764 14.007 1.00 0.00 ATOM 173 CA ALA 24 -0.515 33.197 14.338 1.00 0.00 ATOM 174 C ALA 24 -0.454 34.655 14.752 1.00 0.00 ATOM 175 O ALA 24 0.267 35.028 15.671 1.00 0.00 ATOM 176 CB ALA 24 0.426 32.955 13.143 1.00 0.00 ATOM 177 N ALA 25 -1.268 35.519 14.116 1.00 0.00 ATOM 178 CA ALA 25 -1.468 36.890 14.528 1.00 0.00 ATOM 179 C ALA 25 -1.979 37.012 15.961 1.00 0.00 ATOM 180 O ALA 25 -1.485 37.822 16.738 1.00 0.00 ATOM 181 CB ALA 25 -2.466 37.560 13.566 1.00 0.00 ATOM 182 N ASN 26 -2.946 36.169 16.376 1.00 0.00 ATOM 183 CA ASN 26 -3.370 36.073 17.765 1.00 0.00 ATOM 184 C ASN 26 -2.283 35.508 18.683 1.00 0.00 ATOM 185 O ASN 26 -2.068 36.030 19.775 1.00 0.00 ATOM 186 CB ASN 26 -4.666 35.237 17.922 1.00 0.00 ATOM 187 CG ASN 26 -5.838 35.968 17.284 1.00 0.00 ATOM 188 OD1 ASN 26 -6.397 36.909 17.853 1.00 0.00 ATOM 189 ND2 ASN 26 -6.251 35.551 16.065 1.00 0.00 ATOM 190 N GLU 27 -1.542 34.461 18.248 1.00 0.00 ATOM 191 CA GLU 27 -0.434 33.862 18.992 1.00 0.00 ATOM 192 C GLU 27 0.699 34.844 19.282 1.00 0.00 ATOM 193 O GLU 27 1.244 34.892 20.382 1.00 0.00 ATOM 194 CB GLU 27 0.154 32.616 18.268 1.00 0.00 ATOM 195 CG GLU 27 -0.873 31.476 18.046 1.00 0.00 ATOM 196 CD GLU 27 -0.241 30.178 17.567 1.00 0.00 ATOM 197 OE1 GLU 27 0.603 29.610 18.310 1.00 0.00 ATOM 198 OE2 GLU 27 -0.657 29.624 16.513 1.00 0.00 ATOM 199 N LEU 28 1.036 35.708 18.304 1.00 0.00 ATOM 200 CA LEU 28 2.070 36.720 18.435 1.00 0.00 ATOM 201 C LEU 28 1.502 38.036 18.955 1.00 0.00 ATOM 202 O LEU 28 2.209 39.035 19.070 1.00 0.00 ATOM 203 CB LEU 28 2.734 36.979 17.058 1.00 0.00 ATOM 204 CG LEU 28 3.454 35.754 16.452 1.00 0.00 ATOM 205 CD1 LEU 28 3.886 36.049 15.008 1.00 0.00 ATOM 206 CD2 LEU 28 4.663 35.311 17.293 1.00 0.00 ATOM 207 N ARG 29 0.205 38.039 19.323 1.00 0.00 ATOM 208 CA ARG 29 -0.494 39.101 20.024 1.00 0.00 ATOM 209 C ARG 29 -0.697 40.381 19.227 1.00 0.00 ATOM 210 O ARG 29 -0.780 41.485 19.771 1.00 0.00 ATOM 211 CB ARG 29 0.106 39.376 21.426 1.00 0.00 ATOM 212 CG ARG 29 0.112 38.122 22.326 1.00 0.00 ATOM 213 CD ARG 29 0.820 38.311 23.670 1.00 0.00 ATOM 214 NE ARG 29 0.068 39.377 24.407 1.00 0.00 ATOM 215 CZ ARG 29 0.454 39.912 25.573 1.00 0.00 ATOM 216 NH1 ARG 29 -0.244 40.921 26.096 1.00 0.00 ATOM 217 NH2 ARG 29 1.525 39.461 26.224 1.00 0.00 ATOM 218 N VAL 30 -0.902 40.247 17.902 1.00 0.00 ATOM 219 CA VAL 30 -1.397 41.303 17.041 1.00 0.00 ATOM 220 C VAL 30 -2.821 41.621 17.453 1.00 0.00 ATOM 221 O VAL 30 -3.742 40.828 17.286 1.00 0.00 ATOM 222 CB VAL 30 -1.356 40.941 15.559 1.00 0.00 ATOM 223 CG1 VAL 30 -1.882 42.100 14.687 1.00 0.00 ATOM 224 CG2 VAL 30 0.091 40.586 15.160 1.00 0.00 ATOM 225 N THR 31 -3.033 42.807 18.047 1.00 0.00 ATOM 226 CA THR 31 -4.287 43.104 18.736 1.00 0.00 ATOM 227 C THR 31 -5.243 43.811 17.787 1.00 0.00 ATOM 228 O THR 31 -6.426 44.000 18.063 1.00 0.00 ATOM 229 CB THR 31 -4.004 43.897 20.009 1.00 0.00 ATOM 230 CG2 THR 31 -5.270 44.210 20.821 1.00 0.00 ATOM 231 OG1 THR 31 -3.183 43.114 20.874 1.00 0.00 ATOM 232 N GLU 32 -4.763 44.108 16.563 1.00 0.00 ATOM 233 CA GLU 32 -5.547 44.623 15.458 1.00 0.00 ATOM 234 C GLU 32 -6.238 43.441 14.766 1.00 0.00 ATOM 235 O GLU 32 -7.215 42.919 15.304 1.00 0.00 ATOM 236 CB GLU 32 -4.585 45.456 14.564 1.00 0.00 ATOM 237 CG GLU 32 -5.219 46.357 13.472 1.00 0.00 ATOM 238 CD GLU 32 -5.601 45.596 12.217 1.00 0.00 ATOM 239 OE1 GLU 32 -6.738 45.780 11.723 1.00 0.00 ATOM 240 OE2 GLU 32 -4.773 44.769 11.747 1.00 0.00 ATOM 241 N ARG 33 -5.720 42.971 13.608 1.00 0.00 ATOM 242 CA ARG 33 -6.063 41.780 12.837 1.00 0.00 ATOM 243 C ARG 33 -6.807 42.021 11.523 1.00 0.00 ATOM 244 O ARG 33 -6.315 41.467 10.539 1.00 0.00 ATOM 245 CB ARG 33 -6.649 40.565 13.614 1.00 0.00 ATOM 246 CG ARG 33 -5.655 39.998 14.653 1.00 0.00 ATOM 247 CD ARG 33 -6.295 39.386 15.903 1.00 0.00 ATOM 248 NE ARG 33 -6.983 40.507 16.612 1.00 0.00 ATOM 249 CZ ARG 33 -7.408 40.470 17.879 1.00 0.00 ATOM 250 NH1 ARG 33 -7.861 41.595 18.436 1.00 0.00 ATOM 251 NH2 ARG 33 -7.385 39.355 18.605 1.00 0.00 ATOM 252 N PRO 34 -7.912 42.743 11.311 1.00 0.00 ATOM 253 CA PRO 34 -8.551 42.804 9.997 1.00 0.00 ATOM 254 C PRO 34 -7.741 43.536 8.935 1.00 0.00 ATOM 255 O PRO 34 -7.793 43.104 7.778 1.00 0.00 ATOM 256 CB PRO 34 -9.922 43.452 10.260 1.00 0.00 ATOM 257 CG PRO 34 -9.736 44.228 11.566 1.00 0.00 ATOM 258 CD PRO 34 -8.726 43.382 12.344 1.00 0.00 ATOM 259 N PHE 35 -6.998 44.618 9.256 1.00 0.00 ATOM 260 CA PHE 35 -6.045 45.239 8.349 1.00 0.00 ATOM 261 C PHE 35 -4.835 44.339 8.137 1.00 0.00 ATOM 262 O PHE 35 -4.404 44.132 7.004 1.00 0.00 ATOM 263 CB PHE 35 -5.612 46.649 8.840 1.00 0.00 ATOM 264 CG PHE 35 -4.730 47.354 7.842 1.00 0.00 ATOM 265 CD1 PHE 35 -5.256 47.831 6.630 1.00 0.00 ATOM 266 CD2 PHE 35 -3.356 47.511 8.097 1.00 0.00 ATOM 267 CE1 PHE 35 -4.425 48.453 5.690 1.00 0.00 ATOM 268 CE2 PHE 35 -2.522 48.134 7.160 1.00 0.00 ATOM 269 CZ PHE 35 -3.058 48.607 5.955 1.00 0.00 ATOM 270 N TRP 36 -4.301 43.723 9.212 1.00 0.00 ATOM 271 CA TRP 36 -3.178 42.800 9.145 1.00 0.00 ATOM 272 C TRP 36 -3.445 41.619 8.218 1.00 0.00 ATOM 273 O TRP 36 -2.635 41.308 7.353 1.00 0.00 ATOM 274 CB TRP 36 -2.831 42.285 10.570 1.00 0.00 ATOM 275 CG TRP 36 -1.506 41.547 10.712 1.00 0.00 ATOM 276 CD1 TRP 36 -0.285 42.058 11.059 1.00 0.00 ATOM 277 CD2 TRP 36 -1.305 40.137 10.490 1.00 0.00 ATOM 278 CE2 TRP 36 0.063 39.875 10.720 1.00 0.00 ATOM 279 NE1 TRP 36 0.666 41.060 11.075 1.00 0.00 ATOM 280 CE3 TRP 36 -2.176 39.116 10.114 1.00 0.00 ATOM 281 CZ3 TRP 36 -1.648 37.828 9.939 1.00 0.00 ATOM 282 CZ2 TRP 36 0.580 38.594 10.574 1.00 0.00 ATOM 283 CH2 TRP 36 -0.290 37.569 10.175 1.00 0.00 ATOM 284 N ILE 37 -4.638 40.988 8.313 1.00 0.00 ATOM 285 CA ILE 37 -5.091 39.932 7.413 1.00 0.00 ATOM 286 C ILE 37 -5.177 40.428 5.979 1.00 0.00 ATOM 287 O ILE 37 -4.751 39.759 5.042 1.00 0.00 ATOM 288 CB ILE 37 -6.434 39.356 7.879 1.00 0.00 ATOM 289 CG1 ILE 37 -6.228 38.550 9.186 1.00 0.00 ATOM 290 CG2 ILE 37 -7.094 38.475 6.788 1.00 0.00 ATOM 291 CD1 ILE 37 -7.531 38.212 9.920 1.00 0.00 ATOM 292 N SER 38 -5.685 41.659 5.766 1.00 0.00 ATOM 293 CA SER 38 -5.788 42.263 4.440 1.00 0.00 ATOM 294 C SER 38 -4.446 42.442 3.764 1.00 0.00 ATOM 295 O SER 38 -4.268 42.119 2.590 1.00 0.00 ATOM 296 CB SER 38 -6.486 43.650 4.456 1.00 0.00 ATOM 297 OG SER 38 -7.753 43.577 5.112 1.00 0.00 ATOM 298 N SER 39 -3.451 42.904 4.541 1.00 0.00 ATOM 299 CA SER 39 -2.127 43.263 4.064 1.00 0.00 ATOM 300 C SER 39 -1.159 42.098 4.129 1.00 0.00 ATOM 301 O SER 39 0.004 42.225 3.761 1.00 0.00 ATOM 302 CB SER 39 -1.550 44.423 4.907 1.00 0.00 ATOM 303 OG SER 39 -2.377 45.576 4.745 1.00 0.00 ATOM 304 N PHE 40 -1.644 40.902 4.524 1.00 0.00 ATOM 305 CA PHE 40 -0.900 39.653 4.473 1.00 0.00 ATOM 306 C PHE 40 -1.221 38.926 3.166 1.00 0.00 ATOM 307 O PHE 40 -0.794 37.801 2.940 1.00 0.00 ATOM 308 CB PHE 40 -1.305 38.776 5.695 1.00 0.00 ATOM 309 CG PHE 40 -0.259 37.755 6.055 1.00 0.00 ATOM 310 CD1 PHE 40 0.842 38.126 6.846 1.00 0.00 ATOM 311 CD2 PHE 40 -0.369 36.421 5.629 1.00 0.00 ATOM 312 CE1 PHE 40 1.821 37.187 7.194 1.00 0.00 ATOM 313 CE2 PHE 40 0.616 35.482 5.960 1.00 0.00 ATOM 314 CZ PHE 40 1.709 35.863 6.747 1.00 0.00 ATOM 315 N ILE 41 -2.010 39.588 2.281 1.00 0.00 ATOM 316 CA ILE 41 -2.474 39.156 0.958 1.00 0.00 ATOM 317 C ILE 41 -3.859 38.518 1.104 1.00 0.00 ATOM 318 O ILE 41 -4.604 38.307 0.144 1.00 0.00 ATOM 319 CB ILE 41 -1.448 38.376 0.107 1.00 0.00 ATOM 320 CG1 ILE 41 -0.187 39.250 -0.127 1.00 0.00 ATOM 321 CG2 ILE 41 -2.032 37.904 -1.246 1.00 0.00 ATOM 322 CD1 ILE 41 0.991 38.486 -0.747 1.00 0.00 ATOM 323 N GLY 42 -4.313 38.364 2.367 1.00 0.00 ATOM 324 CA GLY 42 -5.523 37.674 2.803 1.00 0.00 ATOM 325 C GLY 42 -6.810 38.403 2.561 1.00 0.00 ATOM 326 O GLY 42 -7.882 37.933 2.925 1.00 0.00 ATOM 327 N ARG 43 -6.748 39.578 1.921 1.00 0.00 ATOM 328 CA ARG 43 -7.925 40.190 1.339 1.00 0.00 ATOM 329 C ARG 43 -7.549 40.921 0.063 1.00 0.00 ATOM 330 O ARG 43 -8.290 41.758 -0.439 1.00 0.00 ATOM 331 CB ARG 43 -8.574 41.165 2.346 1.00 0.00 ATOM 332 CG ARG 43 -10.109 41.254 2.240 1.00 0.00 ATOM 333 CD ARG 43 -10.752 42.284 3.184 1.00 0.00 ATOM 334 NE ARG 43 -10.121 42.182 4.545 1.00 0.00 ATOM 335 CZ ARG 43 -10.319 41.201 5.438 1.00 0.00 ATOM 336 NH1 ARG 43 -9.603 41.195 6.565 1.00 0.00 ATOM 337 NH2 ARG 43 -11.190 40.219 5.221 1.00 0.00 ATOM 338 N SER 44 -6.360 40.615 -0.502 1.00 0.00 ATOM 339 CA SER 44 -5.886 41.239 -1.732 1.00 0.00 ATOM 340 C SER 44 -6.329 40.442 -2.944 1.00 0.00 ATOM 341 O SER 44 -6.914 40.979 -3.878 1.00 0.00 ATOM 342 CB SER 44 -4.341 41.383 -1.714 1.00 0.00 ATOM 343 OG SER 44 -3.821 42.013 -2.885 1.00 0.00 ATOM 344 N LYS 45 -6.105 39.111 -2.929 1.00 0.00 ATOM 345 CA LYS 45 -6.584 38.220 -3.975 1.00 0.00 ATOM 346 C LYS 45 -7.590 37.242 -3.416 1.00 0.00 ATOM 347 O LYS 45 -8.031 36.321 -4.097 1.00 0.00 ATOM 348 CB LYS 45 -5.400 37.438 -4.628 1.00 0.00 ATOM 349 CG LYS 45 -4.519 36.560 -3.707 1.00 0.00 ATOM 350 CD LYS 45 -5.009 35.112 -3.473 1.00 0.00 ATOM 351 CE LYS 45 -4.050 34.286 -2.605 1.00 0.00 ATOM 352 NZ LYS 45 -4.633 32.994 -2.192 1.00 0.00 TER END