####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS354_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS354_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 2 - 23 4.89 14.20 LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 4.97 14.33 LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 4.95 10.22 LCS_AVERAGE: 48.45 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.95 19.09 LCS_AVERAGE: 21.07 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.68 11.03 LCS_AVERAGE: 14.72 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 8 22 3 4 5 7 8 10 11 13 14 15 17 18 22 24 29 31 32 35 35 36 LCS_GDT V 3 V 3 3 8 22 3 3 5 7 8 10 11 14 15 16 19 21 25 27 29 31 32 35 35 36 LCS_GDT Q 4 Q 4 3 8 22 3 4 4 7 8 10 11 13 14 15 16 18 21 21 25 31 32 35 35 36 LCS_GDT G 5 G 5 4 8 22 3 3 5 7 8 10 11 13 14 15 17 18 21 22 25 31 32 35 35 36 LCS_GDT P 6 P 6 4 8 22 3 3 5 7 8 10 11 13 14 15 17 18 21 22 24 27 32 35 35 36 LCS_GDT W 7 W 7 4 8 22 3 4 5 7 8 10 11 13 14 15 18 20 23 25 29 31 32 35 35 36 LCS_GDT V 8 V 8 4 11 22 3 3 5 7 9 12 13 14 16 18 20 23 25 27 29 31 32 35 35 36 LCS_GDT G 9 G 9 9 12 22 8 8 9 9 10 12 13 14 16 18 20 23 25 27 29 31 32 35 35 36 LCS_GDT S 10 S 10 9 12 22 8 8 10 12 12 12 13 14 15 17 21 23 25 27 29 31 32 35 35 36 LCS_GDT S 11 S 11 9 12 22 8 8 9 9 10 12 13 13 15 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT Y 12 Y 12 9 12 22 8 8 9 9 10 12 13 13 14 17 21 23 25 27 29 31 32 35 35 36 LCS_GDT V 13 V 13 9 12 22 8 8 9 9 10 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT A 14 A 14 9 12 22 8 8 9 9 10 12 13 13 14 18 21 22 24 27 29 31 32 35 35 36 LCS_GDT E 15 E 15 9 12 22 8 8 9 9 10 12 13 13 14 16 17 19 22 24 27 29 31 32 33 36 LCS_GDT T 16 T 16 9 12 22 8 8 9 9 10 12 13 13 14 16 17 19 22 25 27 31 32 35 35 36 LCS_GDT G 17 G 17 9 12 22 4 6 9 9 10 12 13 13 14 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT Q 18 Q 18 4 12 22 3 4 6 8 10 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT N 19 N 19 4 12 22 3 4 7 8 10 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT W 20 W 20 10 12 22 8 9 11 12 12 12 13 14 16 18 18 21 24 26 28 30 32 35 35 36 LCS_GDT A 21 A 21 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT S 22 S 22 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT L 23 L 23 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT A 24 A 24 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT A 25 A 25 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT N 26 N 26 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT E 27 E 27 10 11 22 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT L 28 L 28 10 11 22 5 9 11 12 12 12 13 14 16 17 19 22 25 27 29 31 32 35 35 36 LCS_GDT R 29 R 29 10 11 22 3 7 11 12 12 12 13 14 16 18 19 23 25 27 29 31 32 35 35 36 LCS_GDT V 30 V 30 4 5 22 3 4 4 5 7 10 12 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT T 31 T 31 4 5 22 3 4 4 5 7 10 12 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT E 32 E 32 4 5 21 3 4 4 5 7 10 12 14 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT R 33 R 33 3 5 21 3 3 4 5 8 10 11 14 15 17 19 21 24 27 29 31 32 35 35 36 LCS_GDT P 34 P 34 3 4 21 3 3 4 5 7 9 12 14 16 18 20 23 25 27 29 31 32 35 35 36 LCS_GDT F 35 F 35 3 8 21 3 4 4 5 6 8 11 13 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT W 36 W 36 5 8 21 4 5 6 8 9 10 12 13 16 18 21 23 25 27 29 31 32 35 35 36 LCS_GDT I 37 I 37 5 8 21 4 5 7 8 10 10 12 14 15 18 21 22 25 26 29 31 32 35 35 36 LCS_GDT S 38 S 38 5 8 19 4 5 7 8 10 10 11 11 12 16 19 21 23 25 27 29 29 31 33 35 LCS_GDT S 39 S 39 5 8 19 4 5 11 12 12 12 13 14 15 17 19 21 23 25 27 29 29 31 33 35 LCS_GDT F 40 F 40 5 8 19 4 5 7 8 10 12 13 13 15 16 19 21 23 25 27 29 29 31 32 35 LCS_GDT I 41 I 41 5 8 19 4 5 5 7 10 10 11 11 12 15 16 17 18 20 22 24 25 27 29 29 LCS_GDT G 42 G 42 5 8 19 4 5 5 5 10 10 11 11 12 15 16 17 18 19 20 21 25 25 25 26 LCS_GDT R 43 R 43 5 6 19 4 5 5 5 5 6 8 10 12 15 16 17 18 19 20 21 22 24 25 25 LCS_GDT S 44 S 44 5 6 19 4 5 5 5 5 6 7 10 12 15 15 17 18 19 20 21 22 24 25 25 LCS_GDT K 45 K 45 5 6 19 3 5 5 5 5 6 7 10 12 15 16 17 18 19 20 21 22 24 25 25 LCS_AVERAGE LCS_A: 28.08 ( 14.72 21.07 48.45 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 11 12 12 12 13 14 16 18 21 23 25 27 29 31 32 35 35 36 GDT PERCENT_AT 18.18 20.45 25.00 27.27 27.27 27.27 29.55 31.82 36.36 40.91 47.73 52.27 56.82 61.36 65.91 70.45 72.73 79.55 79.55 81.82 GDT RMS_LOCAL 0.28 0.37 0.74 1.02 1.02 1.02 1.45 2.16 2.92 3.52 4.11 4.42 4.63 4.95 5.22 5.53 5.65 6.10 6.10 6.29 GDT RMS_ALL_AT 11.04 11.15 11.09 11.03 11.03 11.03 11.22 10.66 10.25 10.61 10.40 10.15 9.95 10.06 9.94 9.88 9.93 9.64 9.64 9.68 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.974 0 0.109 0.171 20.648 0.000 0.000 - LGA V 3 V 3 15.129 0 0.030 0.081 15.776 0.000 0.000 14.560 LGA Q 4 Q 4 16.406 0 0.658 1.223 20.995 0.000 0.000 20.995 LGA G 5 G 5 17.994 0 0.083 0.083 17.994 0.000 0.000 - LGA P 6 P 6 16.807 0 0.063 0.143 20.116 0.000 0.000 20.116 LGA W 7 W 7 14.974 0 0.462 1.215 23.056 0.000 0.000 23.056 LGA V 8 V 8 11.211 0 0.616 0.535 15.079 0.000 0.000 11.357 LGA G 9 G 9 7.318 0 0.511 0.511 8.690 4.091 4.091 - LGA S 10 S 10 1.038 0 0.073 0.580 3.718 36.364 30.606 3.708 LGA S 11 S 11 6.253 0 0.035 0.049 10.454 2.727 1.818 10.454 LGA Y 12 Y 12 8.586 0 0.064 1.200 11.350 0.000 0.000 11.350 LGA V 13 V 13 3.860 0 0.043 1.191 7.991 3.182 18.182 2.234 LGA A 14 A 14 9.926 0 0.026 0.033 14.006 0.000 0.000 - LGA E 15 E 15 14.551 0 0.054 1.038 19.804 0.000 0.000 19.465 LGA T 16 T 16 12.935 0 0.168 1.136 13.906 0.000 0.000 9.930 LGA G 17 G 17 11.901 0 0.714 0.714 11.901 0.000 0.000 - LGA Q 18 Q 18 8.514 0 0.662 1.211 15.031 0.000 0.000 12.753 LGA N 19 N 19 4.598 0 0.044 1.338 8.128 11.364 5.909 8.128 LGA W 20 W 20 2.684 0 0.589 1.202 11.830 48.182 13.896 11.830 LGA A 21 A 21 2.624 0 0.040 0.042 2.981 35.909 34.182 - LGA S 22 S 22 2.013 0 0.032 0.612 2.918 48.182 43.030 2.918 LGA L 23 L 23 1.030 0 0.056 0.069 2.158 78.182 64.773 2.158 LGA A 24 A 24 1.262 0 0.034 0.043 1.808 69.545 65.818 - LGA A 25 A 25 0.383 0 0.070 0.078 0.878 90.909 89.091 - LGA N 26 N 26 0.701 0 0.053 1.215 4.615 82.273 57.273 4.615 LGA E 27 E 27 1.194 0 0.038 0.977 4.326 65.909 41.010 4.124 LGA L 28 L 28 1.730 0 0.154 1.167 6.738 61.818 34.773 4.746 LGA R 29 R 29 1.190 0 0.348 0.917 9.892 41.818 20.331 9.892 LGA V 30 V 30 7.512 0 0.637 1.067 11.509 0.455 0.260 11.509 LGA T 31 T 31 10.409 0 0.568 1.407 12.952 0.000 0.000 11.636 LGA E 32 E 32 15.650 0 0.655 1.315 17.956 0.000 0.000 17.956 LGA R 33 R 33 18.486 0 0.079 0.899 18.901 0.000 0.000 17.818 LGA P 34 P 34 18.713 0 0.536 0.627 23.134 0.000 0.000 23.134 LGA F 35 F 35 13.709 0 0.553 1.446 18.677 0.000 0.000 18.677 LGA W 36 W 36 9.440 0 0.520 1.278 13.483 0.455 0.130 12.944 LGA I 37 I 37 5.812 0 0.077 1.407 8.940 1.364 0.682 8.940 LGA S 38 S 38 6.644 0 0.081 0.090 8.363 1.818 1.212 7.742 LGA S 39 S 39 1.105 0 0.124 0.555 5.488 32.727 23.636 5.488 LGA F 40 F 40 4.387 0 0.121 1.670 8.902 10.909 9.421 4.750 LGA I 41 I 41 9.593 0 0.578 1.617 13.177 0.000 0.000 13.177 LGA G 42 G 42 12.590 0 0.043 0.043 14.286 0.000 0.000 - LGA R 43 R 43 12.359 0 0.092 1.270 14.603 0.000 0.000 14.603 LGA S 44 S 44 13.832 0 0.063 0.650 15.305 0.000 0.000 14.891 LGA K 45 K 45 13.755 0 0.600 1.110 19.983 0.000 0.000 19.983 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.925 8.854 9.926 16.550 12.730 3.584 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.16 37.500 32.800 0.618 LGA_LOCAL RMSD: 2.165 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.657 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.925 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.086414 * X + 0.002692 * Y + -0.996256 * Z + 2.338593 Y_new = 0.287553 * X + 0.957369 * Y + 0.027529 * Z + 20.330545 Z_new = 0.953858 * X + -0.288855 * Y + 0.081956 * Z + 12.917019 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.278866 -1.265834 -1.294334 [DEG: 73.2736 -72.5270 -74.1599 ] ZXZ: -1.598421 1.488748 1.864846 [DEG: -91.5828 85.2990 106.8478 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS354_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS354_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.16 32.800 8.93 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS354_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 9 N ALA 2 -4.423 22.768 12.499 1.00 3.53 ATOM 10 CA ALA 2 -4.041 24.147 12.526 1.00 3.53 ATOM 11 CB ALA 2 -5.225 25.113 12.709 1.00 3.53 ATOM 12 C ALA 2 -3.129 24.350 13.688 1.00 3.53 ATOM 13 O ALA 2 -3.459 23.989 14.816 1.00 3.53 ATOM 14 N VAL 3 -1.942 24.941 13.442 1.00 0.07 ATOM 15 CA VAL 3 -1.062 25.183 14.546 1.00 0.07 ATOM 16 CB VAL 3 0.204 24.377 14.515 1.00 0.07 ATOM 17 CG1 VAL 3 1.094 24.812 15.691 1.00 0.07 ATOM 18 CG2 VAL 3 -0.168 22.885 14.522 1.00 0.07 ATOM 19 C VAL 3 -0.683 26.631 14.561 1.00 0.07 ATOM 20 O VAL 3 -0.337 27.225 13.541 1.00 0.07 ATOM 21 N GLN 4 -0.812 27.231 15.757 1.00 0.83 ATOM 22 CA GLN 4 -0.482 28.585 16.104 1.00 0.83 ATOM 23 CB GLN 4 -1.055 28.983 17.475 1.00 0.83 ATOM 24 CG GLN 4 -0.733 30.418 17.895 1.00 0.83 ATOM 25 CD GLN 4 -1.302 30.624 19.292 1.00 0.83 ATOM 26 OE1 GLN 4 -2.292 29.999 19.671 1.00 0.83 ATOM 27 NE2 GLN 4 -0.654 31.517 20.087 1.00 0.83 ATOM 28 C GLN 4 1.007 28.744 16.215 1.00 0.83 ATOM 29 O GLN 4 1.538 29.834 16.007 1.00 0.83 ATOM 30 N GLY 5 1.710 27.656 16.582 1.00 0.21 ATOM 31 CA GLY 5 3.110 27.719 16.901 1.00 0.21 ATOM 32 C GLY 5 3.895 28.334 15.784 1.00 0.21 ATOM 33 O GLY 5 3.585 28.220 14.601 1.00 0.21 ATOM 34 N PRO 6 4.937 28.996 16.215 1.00 0.63 ATOM 35 CA PRO 6 5.881 29.675 15.367 1.00 0.63 ATOM 36 CD PRO 6 5.060 29.392 17.607 1.00 0.63 ATOM 37 CB PRO 6 6.721 30.557 16.297 1.00 0.63 ATOM 38 CG PRO 6 6.471 29.988 17.705 1.00 0.63 ATOM 39 C PRO 6 6.681 28.674 14.605 1.00 0.63 ATOM 40 O PRO 6 7.496 29.062 13.770 1.00 0.63 ATOM 41 N TRP 7 6.466 27.385 14.899 1.00 1.33 ATOM 42 CA TRP 7 7.179 26.300 14.304 1.00 1.33 ATOM 43 CB TRP 7 6.687 24.946 14.849 1.00 1.33 ATOM 44 CG TRP 7 7.513 23.743 14.464 1.00 1.33 ATOM 45 CD2 TRP 7 8.523 23.179 15.314 1.00 1.33 ATOM 46 CD1 TRP 7 7.463 22.960 13.348 1.00 1.33 ATOM 47 NE1 TRP 7 8.385 21.943 13.448 1.00 1.33 ATOM 48 CE2 TRP 7 9.042 22.066 14.655 1.00 1.33 ATOM 49 CE3 TRP 7 8.974 23.555 16.546 1.00 1.33 ATOM 50 CZ2 TRP 7 10.027 21.308 15.222 1.00 1.33 ATOM 51 CZ3 TRP 7 9.970 22.792 17.113 1.00 1.33 ATOM 52 CH2 TRP 7 10.486 21.691 16.463 1.00 1.33 ATOM 53 C TRP 7 6.922 26.308 12.828 1.00 1.33 ATOM 54 O TRP 7 7.830 26.034 12.046 1.00 1.33 ATOM 55 N VAL 8 5.686 26.630 12.390 1.00 1.14 ATOM 56 CA VAL 8 5.425 26.501 10.985 1.00 1.14 ATOM 57 CB VAL 8 4.016 26.156 10.650 1.00 1.14 ATOM 58 CG1 VAL 8 3.807 26.319 9.136 1.00 1.14 ATOM 59 CG2 VAL 8 3.839 24.704 11.119 1.00 1.14 ATOM 60 C VAL 8 5.880 27.673 10.181 1.00 1.14 ATOM 61 O VAL 8 5.518 28.823 10.419 1.00 1.14 ATOM 62 N GLY 9 6.685 27.353 9.146 1.00 1.46 ATOM 63 CA GLY 9 7.293 28.324 8.286 1.00 1.46 ATOM 64 C GLY 9 6.258 28.859 7.351 1.00 1.46 ATOM 65 O GLY 9 5.152 28.332 7.247 1.00 1.46 ATOM 66 N SER 10 6.628 29.926 6.621 1.00 4.56 ATOM 67 CA SER 10 5.724 30.599 5.737 1.00 4.56 ATOM 68 CB SER 10 6.365 31.817 5.049 1.00 4.56 ATOM 69 OG SER 10 6.727 32.791 6.017 1.00 4.56 ATOM 70 C SER 10 5.278 29.664 4.660 1.00 4.56 ATOM 71 O SER 10 4.117 29.688 4.255 1.00 4.56 ATOM 72 N SER 11 6.187 28.811 4.162 1.00 3.75 ATOM 73 CA SER 11 5.829 27.933 3.086 1.00 3.75 ATOM 74 CB SER 11 7.010 27.071 2.609 1.00 3.75 ATOM 75 OG SER 11 6.599 26.222 1.547 1.00 3.75 ATOM 76 C SER 11 4.751 26.997 3.539 1.00 3.75 ATOM 77 O SER 11 3.747 26.820 2.851 1.00 3.75 ATOM 78 N TYR 12 4.928 26.383 4.723 1.00 4.04 ATOM 79 CA TYR 12 3.996 25.407 5.205 1.00 4.04 ATOM 80 CB TYR 12 4.444 24.748 6.521 1.00 4.04 ATOM 81 CG TYR 12 3.390 23.764 6.902 1.00 4.04 ATOM 82 CD1 TYR 12 3.396 22.497 6.365 1.00 4.04 ATOM 83 CD2 TYR 12 2.397 24.103 7.791 1.00 4.04 ATOM 84 CE1 TYR 12 2.426 21.585 6.711 1.00 4.04 ATOM 85 CE2 TYR 12 1.425 23.198 8.142 1.00 4.04 ATOM 86 CZ TYR 12 1.439 21.935 7.601 1.00 4.04 ATOM 87 OH TYR 12 0.444 21.001 7.957 1.00 4.04 ATOM 88 C TYR 12 2.672 26.054 5.465 1.00 4.04 ATOM 89 O TYR 12 1.627 25.499 5.128 1.00 4.04 ATOM 90 N VAL 13 2.680 27.248 6.083 1.00 2.88 ATOM 91 CA VAL 13 1.452 27.905 6.431 1.00 2.88 ATOM 92 CB VAL 13 1.655 29.173 7.212 1.00 2.88 ATOM 93 CG1 VAL 13 2.359 28.823 8.533 1.00 2.88 ATOM 94 CG2 VAL 13 2.409 30.188 6.342 1.00 2.88 ATOM 95 C VAL 13 0.696 28.255 5.188 1.00 2.88 ATOM 96 O VAL 13 -0.527 28.134 5.144 1.00 2.88 ATOM 97 N ALA 14 1.407 28.708 4.141 1.00 0.49 ATOM 98 CA ALA 14 0.753 29.114 2.929 1.00 0.49 ATOM 99 CB ALA 14 1.736 29.644 1.871 1.00 0.49 ATOM 100 C ALA 14 0.038 27.943 2.332 1.00 0.49 ATOM 101 O ALA 14 -1.095 28.067 1.868 1.00 0.49 ATOM 102 N GLU 15 0.687 26.765 2.324 1.00 0.16 ATOM 103 CA GLU 15 0.092 25.606 1.725 1.00 0.16 ATOM 104 CB GLU 15 1.055 24.405 1.691 1.00 0.16 ATOM 105 CG GLU 15 0.529 23.214 0.888 1.00 0.16 ATOM 106 CD GLU 15 1.585 22.119 0.936 1.00 0.16 ATOM 107 OE1 GLU 15 1.967 21.713 2.066 1.00 0.16 ATOM 108 OE2 GLU 15 2.029 21.677 -0.158 1.00 0.16 ATOM 109 C GLU 15 -1.123 25.201 2.503 1.00 0.16 ATOM 110 O GLU 15 -2.157 24.873 1.923 1.00 0.16 ATOM 111 N THR 16 -1.028 25.223 3.847 1.00 1.78 ATOM 112 CA THR 16 -2.105 24.786 4.690 1.00 1.78 ATOM 113 CB THR 16 -1.739 24.800 6.146 1.00 1.78 ATOM 114 OG1 THR 16 -0.620 23.958 6.378 1.00 1.78 ATOM 115 CG2 THR 16 -2.947 24.310 6.963 1.00 1.78 ATOM 116 C THR 16 -3.298 25.677 4.529 1.00 1.78 ATOM 117 O THR 16 -4.418 25.191 4.381 1.00 1.78 ATOM 118 N GLY 17 -3.096 27.008 4.550 1.00 0.28 ATOM 119 CA GLY 17 -4.217 27.896 4.436 1.00 0.28 ATOM 120 C GLY 17 -3.999 29.038 5.384 1.00 0.28 ATOM 121 O GLY 17 -3.046 29.049 6.162 1.00 0.28 ATOM 122 N GLN 18 -4.921 30.019 5.338 1.00 0.60 ATOM 123 CA GLN 18 -4.906 31.248 6.082 1.00 0.60 ATOM 124 CB GLN 18 -5.966 32.250 5.595 1.00 0.60 ATOM 125 CG GLN 18 -5.656 32.833 4.215 1.00 0.60 ATOM 126 CD GLN 18 -5.724 31.708 3.194 1.00 0.60 ATOM 127 OE1 GLN 18 -6.735 31.017 3.075 1.00 0.60 ATOM 128 NE2 GLN 18 -4.613 31.512 2.435 1.00 0.60 ATOM 129 C GLN 18 -5.122 31.038 7.549 1.00 0.60 ATOM 130 O GLN 18 -4.710 31.870 8.355 1.00 0.60 ATOM 131 N ASN 19 -5.807 29.947 7.933 1.00 0.12 ATOM 132 CA ASN 19 -6.185 29.725 9.302 1.00 0.12 ATOM 133 CB ASN 19 -6.944 28.402 9.498 1.00 0.12 ATOM 134 CG ASN 19 -7.503 28.391 10.913 1.00 0.12 ATOM 135 OD1 ASN 19 -8.231 29.298 11.314 1.00 0.12 ATOM 136 ND2 ASN 19 -7.153 27.336 11.696 1.00 0.12 ATOM 137 C ASN 19 -4.982 29.689 10.196 1.00 0.12 ATOM 138 O ASN 19 -5.022 30.189 11.320 1.00 0.12 ATOM 139 N TRP 20 -3.880 29.089 9.723 1.00 3.89 ATOM 140 CA TRP 20 -2.685 28.921 10.499 1.00 3.89 ATOM 141 CB TRP 20 -1.608 28.223 9.655 1.00 3.89 ATOM 142 CG TRP 20 -0.500 27.559 10.421 1.00 3.89 ATOM 143 CD2 TRP 20 -0.486 26.144 10.637 1.00 3.89 ATOM 144 CD1 TRP 20 0.643 28.051 10.979 1.00 3.89 ATOM 145 NE1 TRP 20 1.363 27.025 11.546 1.00 3.89 ATOM 146 CE2 TRP 20 0.678 25.844 11.336 1.00 3.89 ATOM 147 CE3 TRP 20 -1.372 25.173 10.272 1.00 3.89 ATOM 148 CZ2 TRP 20 0.970 24.558 11.684 1.00 3.89 ATOM 149 CZ3 TRP 20 -1.069 23.880 10.632 1.00 3.89 ATOM 150 CH2 TRP 20 0.079 23.573 11.325 1.00 3.89 ATOM 151 C TRP 20 -2.151 30.281 10.838 1.00 3.89 ATOM 152 O TRP 20 -1.772 30.552 11.978 1.00 3.89 ATOM 153 N ALA 21 -2.091 31.167 9.824 1.00 1.77 ATOM 154 CA ALA 21 -1.577 32.498 9.978 1.00 1.77 ATOM 155 CB ALA 21 -1.515 33.270 8.648 1.00 1.77 ATOM 156 C ALA 21 -2.457 33.276 10.905 1.00 1.77 ATOM 157 O ALA 21 -1.973 34.051 11.729 1.00 1.77 ATOM 158 N SER 22 -3.785 33.097 10.781 1.00 4.18 ATOM 159 CA SER 22 -4.707 33.822 11.605 1.00 4.18 ATOM 160 CB SER 22 -6.173 33.485 11.286 1.00 4.18 ATOM 161 OG SER 22 -6.481 33.874 9.955 1.00 4.18 ATOM 162 C SER 22 -4.460 33.445 13.031 1.00 4.18 ATOM 163 O SER 22 -4.479 34.295 13.918 1.00 4.18 ATOM 164 N LEU 23 -4.217 32.145 13.282 1.00 1.04 ATOM 165 CA LEU 23 -3.975 31.670 14.615 1.00 1.04 ATOM 166 CB LEU 23 -3.815 30.139 14.683 1.00 1.04 ATOM 167 CG LEU 23 -5.088 29.372 14.283 1.00 1.04 ATOM 168 CD1 LEU 23 -4.875 27.851 14.375 1.00 1.04 ATOM 169 CD2 LEU 23 -6.308 29.851 15.090 1.00 1.04 ATOM 170 C LEU 23 -2.700 32.278 15.110 1.00 1.04 ATOM 171 O LEU 23 -2.600 32.680 16.265 1.00 1.04 ATOM 172 N ALA 24 -1.681 32.374 14.243 1.00 3.44 ATOM 173 CA ALA 24 -0.415 32.917 14.647 1.00 3.44 ATOM 174 CB ALA 24 0.619 32.924 13.509 1.00 3.44 ATOM 175 C ALA 24 -0.628 34.338 15.070 1.00 3.44 ATOM 176 O ALA 24 -0.001 34.821 16.011 1.00 3.44 ATOM 177 N ALA 25 -1.532 35.044 14.372 1.00 3.67 ATOM 178 CA ALA 25 -1.820 36.418 14.659 1.00 3.67 ATOM 179 CB ALA 25 -2.899 37.010 13.734 1.00 3.67 ATOM 180 C ALA 25 -2.328 36.500 16.064 1.00 3.67 ATOM 181 O ALA 25 -2.084 37.490 16.752 1.00 3.67 ATOM 182 N ASN 26 -3.078 35.483 16.537 1.00 0.71 ATOM 183 CA ASN 26 -3.526 35.596 17.894 1.00 0.71 ATOM 184 CB ASN 26 -4.506 34.505 18.406 1.00 0.71 ATOM 185 CG ASN 26 -3.863 33.140 18.639 1.00 0.71 ATOM 186 OD1 ASN 26 -2.861 33.004 19.338 1.00 0.71 ATOM 187 ND2 ASN 26 -4.483 32.083 18.048 1.00 0.71 ATOM 188 C ASN 26 -2.300 35.615 18.747 1.00 0.71 ATOM 189 O ASN 26 -2.273 36.259 19.792 1.00 0.71 ATOM 190 N GLU 27 -1.259 34.879 18.309 1.00 1.59 ATOM 191 CA GLU 27 0.025 34.812 18.950 1.00 1.59 ATOM 192 CB GLU 27 0.951 33.742 18.347 1.00 1.59 ATOM 193 CG GLU 27 2.318 33.664 19.029 1.00 1.59 ATOM 194 CD GLU 27 3.096 32.522 18.390 1.00 1.59 ATOM 195 OE1 GLU 27 2.696 31.346 18.600 1.00 1.59 ATOM 196 OE2 GLU 27 4.099 32.809 17.684 1.00 1.59 ATOM 197 C GLU 27 0.697 36.146 18.817 1.00 1.59 ATOM 198 O GLU 27 1.525 36.520 19.644 1.00 1.59 ATOM 199 N LEU 28 0.318 36.926 17.790 1.00 4.51 ATOM 200 CA LEU 28 0.929 38.187 17.463 1.00 4.51 ATOM 201 CB LEU 28 0.223 38.877 16.267 1.00 4.51 ATOM 202 CG LEU 28 0.762 40.243 15.790 1.00 4.51 ATOM 203 CD1 LEU 28 0.141 40.616 14.434 1.00 4.51 ATOM 204 CD2 LEU 28 0.503 41.366 16.805 1.00 4.51 ATOM 205 C LEU 28 0.887 39.046 18.689 1.00 4.51 ATOM 206 O LEU 28 1.683 39.972 18.829 1.00 4.51 ATOM 207 N ARG 29 -0.036 38.753 19.621 1.00 2.85 ATOM 208 CA ARG 29 -0.117 39.517 20.833 1.00 2.85 ATOM 209 CB ARG 29 -1.108 38.904 21.836 1.00 2.85 ATOM 210 CG ARG 29 -1.228 39.680 23.147 1.00 2.85 ATOM 211 CD ARG 29 -2.217 39.051 24.129 1.00 2.85 ATOM 212 NE ARG 29 -1.703 37.694 24.473 1.00 2.85 ATOM 213 CZ ARG 29 -2.540 36.767 25.026 1.00 2.85 ATOM 214 NH1 ARG 29 -3.848 37.080 25.256 1.00 2.85 ATOM 215 NH2 ARG 29 -2.069 35.527 25.348 1.00 2.85 ATOM 216 C ARG 29 1.246 39.510 21.475 1.00 2.85 ATOM 217 O ARG 29 1.673 40.515 22.041 1.00 2.85 ATOM 218 N VAL 30 1.924 38.351 21.471 1.00 3.75 ATOM 219 CA VAL 30 3.278 38.219 21.942 1.00 3.75 ATOM 220 CB VAL 30 3.628 36.828 22.402 1.00 3.75 ATOM 221 CG1 VAL 30 2.645 36.420 23.513 1.00 3.75 ATOM 222 CG2 VAL 30 3.682 35.876 21.199 1.00 3.75 ATOM 223 C VAL 30 4.311 38.610 20.908 1.00 3.75 ATOM 224 O VAL 30 5.424 38.997 21.261 1.00 3.75 ATOM 225 N THR 31 3.977 38.505 19.604 1.00 0.20 ATOM 226 CA THR 31 4.926 38.555 18.513 1.00 0.20 ATOM 227 CB THR 31 4.310 38.701 17.153 1.00 0.20 ATOM 228 OG1 THR 31 5.299 38.480 16.158 1.00 0.20 ATOM 229 CG2 THR 31 3.689 40.096 16.973 1.00 0.20 ATOM 230 C THR 31 6.012 39.574 18.637 1.00 0.20 ATOM 231 O THR 31 5.813 40.785 18.545 1.00 0.20 ATOM 232 N GLU 32 7.226 39.034 18.849 1.00 4.10 ATOM 233 CA GLU 32 8.479 39.717 18.926 1.00 4.10 ATOM 234 CB GLU 32 9.576 38.829 19.537 1.00 4.10 ATOM 235 CG GLU 32 10.910 39.539 19.771 1.00 4.10 ATOM 236 CD GLU 32 11.875 38.526 20.374 1.00 4.10 ATOM 237 OE1 GLU 32 11.486 37.332 20.481 1.00 4.10 ATOM 238 OE2 GLU 32 13.011 38.929 20.736 1.00 4.10 ATOM 239 C GLU 32 8.931 40.124 17.560 1.00 4.10 ATOM 240 O GLU 32 9.689 41.086 17.446 1.00 4.10 ATOM 241 N ARG 33 8.506 39.374 16.513 1.00 4.26 ATOM 242 CA ARG 33 8.963 39.533 15.153 1.00 4.26 ATOM 243 CB ARG 33 8.398 38.464 14.201 1.00 4.26 ATOM 244 CG ARG 33 8.806 37.043 14.598 1.00 4.26 ATOM 245 CD ARG 33 8.250 35.958 13.675 1.00 4.26 ATOM 246 NE ARG 33 8.663 34.641 14.236 1.00 4.26 ATOM 247 CZ ARG 33 9.872 34.097 13.908 1.00 4.26 ATOM 248 NH1 ARG 33 10.713 34.759 13.061 1.00 4.26 ATOM 249 NH2 ARG 33 10.241 32.891 14.431 1.00 4.26 ATOM 250 C ARG 33 8.579 40.877 14.624 1.00 4.26 ATOM 251 O ARG 33 7.408 41.212 14.449 1.00 4.26 ATOM 252 N PRO 34 9.592 41.652 14.348 1.00 2.20 ATOM 253 CA PRO 34 9.383 43.000 13.923 1.00 2.20 ATOM 254 CD PRO 34 10.909 41.454 14.932 1.00 2.20 ATOM 255 CB PRO 34 10.761 43.659 13.923 1.00 2.20 ATOM 256 CG PRO 34 11.545 42.855 14.976 1.00 2.20 ATOM 257 C PRO 34 8.621 43.200 12.654 1.00 2.20 ATOM 258 O PRO 34 7.650 43.952 12.665 1.00 2.20 ATOM 259 N PHE 35 9.049 42.565 11.547 1.00 4.10 ATOM 260 CA PHE 35 8.431 42.859 10.287 1.00 4.10 ATOM 261 CB PHE 35 9.297 42.447 9.084 1.00 4.10 ATOM 262 CG PHE 35 10.383 43.458 8.935 1.00 4.10 ATOM 263 CD1 PHE 35 11.548 43.367 9.661 1.00 4.10 ATOM 264 CD2 PHE 35 10.227 44.504 8.055 1.00 4.10 ATOM 265 CE1 PHE 35 12.541 44.308 9.509 1.00 4.10 ATOM 266 CE2 PHE 35 11.216 45.448 7.900 1.00 4.10 ATOM 267 CZ PHE 35 12.376 45.351 8.629 1.00 4.10 ATOM 268 C PHE 35 7.057 42.300 10.033 1.00 4.10 ATOM 269 O PHE 35 6.118 43.050 9.769 1.00 4.10 ATOM 270 N TRP 36 6.912 40.962 10.112 1.00 3.49 ATOM 271 CA TRP 36 5.760 40.330 9.521 1.00 3.49 ATOM 272 CB TRP 36 5.960 38.813 9.356 1.00 3.49 ATOM 273 CG TRP 36 4.815 38.114 8.664 1.00 3.49 ATOM 274 CD2 TRP 36 4.699 37.982 7.238 1.00 3.49 ATOM 275 CD1 TRP 36 3.721 37.499 9.197 1.00 3.49 ATOM 276 NE1 TRP 36 2.930 36.991 8.194 1.00 3.49 ATOM 277 CE2 TRP 36 3.520 37.282 6.983 1.00 3.49 ATOM 278 CE3 TRP 36 5.509 38.410 6.227 1.00 3.49 ATOM 279 CZ2 TRP 36 3.133 36.997 5.705 1.00 3.49 ATOM 280 CZ3 TRP 36 5.115 38.121 4.938 1.00 3.49 ATOM 281 CH2 TRP 36 3.950 37.429 4.683 1.00 3.49 ATOM 282 C TRP 36 4.405 40.517 10.139 1.00 3.49 ATOM 283 O TRP 36 3.575 41.262 9.616 1.00 3.49 ATOM 284 N ILE 37 4.160 39.891 11.307 1.00 3.50 ATOM 285 CA ILE 37 2.786 39.778 11.714 1.00 3.50 ATOM 286 CB ILE 37 2.467 38.680 12.693 1.00 3.50 ATOM 287 CG1 ILE 37 3.142 38.816 14.052 1.00 3.50 ATOM 288 CG2 ILE 37 2.794 37.352 11.992 1.00 3.50 ATOM 289 CD1 ILE 37 2.613 37.724 14.978 1.00 3.50 ATOM 290 C ILE 37 2.142 41.071 12.079 1.00 3.50 ATOM 291 O ILE 37 0.975 41.282 11.753 1.00 3.50 ATOM 292 N SER 38 2.857 41.972 12.768 1.00 2.16 ATOM 293 CA SER 38 2.250 43.217 13.139 1.00 2.16 ATOM 294 CB SER 38 3.174 44.102 13.993 1.00 2.16 ATOM 295 OG SER 38 4.316 44.485 13.240 1.00 2.16 ATOM 296 C SER 38 1.925 43.981 11.890 1.00 2.16 ATOM 297 O SER 38 0.934 44.708 11.838 1.00 2.16 ATOM 298 N SER 39 2.779 43.856 10.855 1.00 0.47 ATOM 299 CA SER 39 2.578 44.541 9.609 1.00 0.47 ATOM 300 CB SER 39 3.806 44.466 8.685 1.00 0.47 ATOM 301 OG SER 39 3.548 45.160 7.473 1.00 0.47 ATOM 302 C SER 39 1.434 43.911 8.880 1.00 0.47 ATOM 303 O SER 39 0.699 44.576 8.151 1.00 0.47 ATOM 304 N PHE 40 1.267 42.592 9.062 1.00 2.14 ATOM 305 CA PHE 40 0.246 41.841 8.400 1.00 2.14 ATOM 306 CB PHE 40 0.363 40.360 8.814 1.00 2.14 ATOM 307 CG PHE 40 -0.504 39.478 7.992 1.00 2.14 ATOM 308 CD1 PHE 40 -0.241 39.285 6.655 1.00 2.14 ATOM 309 CD2 PHE 40 -1.548 38.799 8.573 1.00 2.14 ATOM 310 CE1 PHE 40 -1.033 38.454 5.898 1.00 2.14 ATOM 311 CE2 PHE 40 -2.339 37.967 7.821 1.00 2.14 ATOM 312 CZ PHE 40 -2.088 37.795 6.482 1.00 2.14 ATOM 313 C PHE 40 -1.076 42.400 8.833 1.00 2.14 ATOM 314 O PHE 40 -1.935 42.690 8.001 1.00 2.14 ATOM 315 N ILE 41 -1.266 42.576 10.157 1.00 3.80 ATOM 316 CA ILE 41 -2.497 43.102 10.685 1.00 3.80 ATOM 317 CB ILE 41 -2.595 42.992 12.182 1.00 3.80 ATOM 318 CG1 ILE 41 -4.007 43.389 12.646 1.00 3.80 ATOM 319 CG2 ILE 41 -1.470 43.819 12.820 1.00 3.80 ATOM 320 CD1 ILE 41 -5.093 42.418 12.187 1.00 3.80 ATOM 321 C ILE 41 -2.672 44.541 10.304 1.00 3.80 ATOM 322 O ILE 41 -3.742 44.937 9.842 1.00 3.80 ATOM 323 N GLY 42 -1.612 45.359 10.459 1.00 4.37 ATOM 324 CA GLY 42 -1.712 46.756 10.143 1.00 4.37 ATOM 325 C GLY 42 -1.946 47.530 11.406 1.00 4.37 ATOM 326 O GLY 42 -1.993 48.756 11.369 1.00 4.37 ATOM 327 N ARG 43 -2.078 46.854 12.564 1.00 3.75 ATOM 328 CA ARG 43 -2.349 47.564 13.786 1.00 3.75 ATOM 329 CB ARG 43 -3.630 47.094 14.496 1.00 3.75 ATOM 330 CG ARG 43 -4.902 47.256 13.662 1.00 3.75 ATOM 331 CD ARG 43 -6.165 46.782 14.387 1.00 3.75 ATOM 332 NE ARG 43 -7.322 46.992 13.472 1.00 3.75 ATOM 333 CZ ARG 43 -7.662 46.028 12.568 1.00 3.75 ATOM 334 NH1 ARG 43 -6.940 44.873 12.497 1.00 3.75 ATOM 335 NH2 ARG 43 -8.724 46.221 11.732 1.00 3.75 ATOM 336 C ARG 43 -1.220 47.308 14.734 1.00 3.75 ATOM 337 O ARG 43 -0.341 46.490 14.469 1.00 3.75 ATOM 338 N SER 44 -1.213 48.035 15.873 1.00 2.35 ATOM 339 CA SER 44 -0.174 47.870 16.849 1.00 2.35 ATOM 340 CB SER 44 0.587 49.167 17.169 1.00 2.35 ATOM 341 OG SER 44 1.594 48.914 18.139 1.00 2.35 ATOM 342 C SER 44 -0.800 47.388 18.122 1.00 2.35 ATOM 343 O SER 44 -2.004 47.515 18.332 1.00 2.35 ATOM 344 N LYS 45 0.029 46.796 19.001 1.00 1.21 ATOM 345 CA LYS 45 -0.418 46.262 20.255 1.00 1.21 ATOM 346 CB LYS 45 0.727 45.613 21.050 1.00 1.21 ATOM 347 CG LYS 45 1.894 46.571 21.304 1.00 1.21 ATOM 348 CD LYS 45 2.893 46.072 22.348 1.00 1.21 ATOM 349 CE LYS 45 4.056 47.038 22.587 1.00 1.21 ATOM 350 NZ LYS 45 3.555 48.301 23.173 1.00 1.21 ATOM 351 C LYS 45 -0.963 47.382 21.080 1.00 1.21 ATOM 352 O LYS 45 -1.998 47.238 21.729 1.00 1.21 TER END