####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 334), selected 44 , name T0953s2TS348_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 10 - 32 4.90 12.08 LONGEST_CONTINUOUS_SEGMENT: 23 11 - 33 4.97 12.01 LCS_AVERAGE: 47.42 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 35 - 43 2.00 29.26 LCS_AVERAGE: 14.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 12 - 16 0.78 20.17 LONGEST_CONTINUOUS_SEGMENT: 5 25 - 29 0.48 23.26 LONGEST_CONTINUOUS_SEGMENT: 5 37 - 41 0.33 29.84 LCS_AVERAGE: 8.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 22 3 3 3 5 5 6 10 11 12 15 19 20 20 21 23 24 25 27 28 29 LCS_GDT V 3 V 3 3 4 22 3 3 3 5 5 6 10 11 12 13 19 20 20 21 22 24 24 27 28 29 LCS_GDT Q 4 Q 4 3 5 22 3 3 3 5 5 6 10 11 12 15 19 20 20 21 23 24 25 27 28 30 LCS_GDT G 5 G 5 4 6 22 2 4 4 5 6 7 10 11 12 16 19 20 21 22 26 28 29 30 30 31 LCS_GDT P 6 P 6 4 6 22 3 4 4 4 6 6 8 10 11 16 19 20 21 25 26 28 29 30 30 31 LCS_GDT W 7 W 7 4 6 22 3 4 4 5 6 7 10 11 13 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT V 8 V 8 4 6 22 3 4 4 5 7 8 8 10 12 16 19 20 20 22 26 28 29 30 30 31 LCS_GDT G 9 G 9 4 6 22 3 3 6 6 6 8 9 11 12 16 19 20 23 25 26 28 29 30 30 31 LCS_GDT S 10 S 10 4 6 23 3 3 4 5 6 6 10 11 13 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT S 11 S 11 3 5 23 3 3 4 5 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT Y 12 Y 12 5 6 23 3 4 6 6 7 8 10 11 13 16 19 20 23 25 26 28 29 30 30 31 LCS_GDT V 13 V 13 5 6 23 3 4 6 6 7 8 10 12 13 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT A 14 A 14 5 6 23 3 4 6 6 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT E 15 E 15 5 6 23 3 4 6 6 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT T 16 T 16 5 6 23 3 3 6 6 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT G 17 G 17 0 6 23 1 2 3 5 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT Q 18 Q 18 3 4 23 2 3 3 4 6 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT N 19 N 19 3 5 23 2 3 8 8 8 10 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT W 20 W 20 4 5 23 3 4 8 8 8 10 10 11 13 15 19 21 23 25 26 28 29 30 30 31 LCS_GDT A 21 A 21 4 5 23 3 4 4 6 7 10 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT S 22 S 22 4 5 23 3 4 4 6 7 10 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT L 23 L 23 4 7 23 3 6 8 8 8 10 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT A 24 A 24 3 7 23 3 3 4 6 7 7 9 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT A 25 A 25 5 7 23 3 6 8 8 8 10 10 10 13 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT N 26 N 26 5 7 23 4 6 8 8 8 10 10 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT E 27 E 27 5 7 23 4 6 8 8 8 10 10 10 11 14 16 16 18 21 23 27 29 30 30 31 LCS_GDT L 28 L 28 5 7 23 4 6 8 8 8 10 10 10 11 14 16 16 18 19 20 27 27 29 30 31 LCS_GDT R 29 R 29 5 7 23 4 6 8 8 8 10 10 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT V 30 V 30 3 6 23 3 3 3 5 5 8 10 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT T 31 T 31 4 6 23 3 3 4 6 7 8 10 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT E 32 E 32 4 6 23 3 3 4 6 7 7 9 11 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT R 33 R 33 4 7 23 3 3 4 6 7 9 11 12 14 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT P 34 P 34 4 7 20 3 3 4 6 7 8 10 11 11 14 19 21 22 24 26 28 29 30 30 31 LCS_GDT F 35 F 35 3 9 20 3 3 4 5 7 9 10 11 13 16 19 21 23 25 26 28 29 30 30 31 LCS_GDT W 36 W 36 4 9 20 3 4 5 7 7 9 10 11 11 13 15 19 20 23 25 27 27 29 30 30 LCS_GDT I 37 I 37 5 9 16 5 5 5 7 7 9 10 11 11 11 12 12 13 14 17 18 19 23 25 26 LCS_GDT S 38 S 38 5 9 16 5 5 5 7 7 9 10 11 11 11 13 14 16 17 22 25 27 28 29 30 LCS_GDT S 39 S 39 5 9 14 5 5 5 7 7 9 10 11 11 11 12 12 13 15 19 22 26 28 28 30 LCS_GDT F 40 F 40 5 9 14 5 5 5 7 7 9 10 11 11 11 12 12 13 13 14 15 17 17 20 24 LCS_GDT I 41 I 41 5 9 14 5 5 5 7 7 9 10 11 11 11 12 12 13 14 14 17 19 21 25 26 LCS_GDT G 42 G 42 3 9 14 3 3 4 6 7 9 9 11 11 11 12 12 13 13 14 15 17 17 20 24 LCS_GDT R 43 R 43 3 9 14 3 3 3 7 7 9 10 11 11 11 12 12 13 13 14 14 15 16 17 20 LCS_GDT S 44 S 44 0 3 14 0 0 3 4 4 5 6 8 10 11 12 12 13 13 14 14 15 15 17 17 LCS_GDT K 45 K 45 0 3 14 0 0 0 4 4 4 6 8 9 10 11 11 12 13 13 13 13 14 14 14 LCS_AVERAGE LCS_A: 23.55 ( 8.68 14.57 47.42 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 8 8 8 10 11 12 14 16 19 21 23 25 26 28 29 30 30 31 GDT PERCENT_AT 11.36 13.64 18.18 18.18 18.18 22.73 25.00 27.27 31.82 36.36 43.18 47.73 52.27 56.82 59.09 63.64 65.91 68.18 68.18 70.45 GDT RMS_LOCAL 0.33 0.56 1.09 1.09 1.09 2.02 2.75 2.89 3.27 3.62 4.01 4.29 4.60 4.91 5.06 5.54 5.65 5.80 5.80 5.99 GDT RMS_ALL_AT 29.84 23.08 22.27 22.27 22.27 21.89 12.54 12.44 12.19 12.59 11.97 12.31 11.84 11.96 12.13 12.47 12.60 12.56 12.56 12.54 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 12.923 0 0.249 0.329 13.019 0.000 0.000 - LGA V 3 V 3 13.578 0 0.161 1.235 14.651 0.000 0.000 14.599 LGA Q 4 Q 4 14.658 0 0.479 0.700 14.876 0.000 0.000 13.953 LGA G 5 G 5 14.038 0 0.187 0.187 14.052 0.000 0.000 - LGA P 6 P 6 15.077 0 0.275 0.511 17.133 0.000 0.000 17.133 LGA W 7 W 7 11.134 1 0.430 1.277 14.475 0.000 0.000 - LGA V 8 V 8 11.684 0 0.057 0.064 15.215 0.000 0.000 15.215 LGA G 9 G 9 11.135 0 0.503 0.503 11.135 0.000 0.000 - LGA S 10 S 10 8.220 0 0.699 0.722 8.874 0.455 0.303 6.711 LGA S 11 S 11 2.528 0 0.513 0.980 4.508 16.364 25.758 2.043 LGA Y 12 Y 12 6.214 1 0.319 1.082 15.414 1.364 0.455 - LGA V 13 V 13 4.568 0 0.392 0.433 7.195 10.455 6.494 4.781 LGA A 14 A 14 2.301 0 0.731 0.694 4.764 36.364 29.455 - LGA E 15 E 15 2.706 0 0.633 1.090 7.203 42.273 18.990 6.002 LGA T 16 T 16 2.865 0 0.134 0.184 4.252 29.091 20.519 3.707 LGA G 17 G 17 2.231 0 0.611 0.611 2.991 42.273 42.273 - LGA Q 18 Q 18 2.087 0 0.384 1.242 3.476 41.818 32.929 2.882 LGA N 19 N 19 2.438 0 0.095 1.302 6.154 27.727 16.364 6.154 LGA W 20 W 20 5.415 1 0.614 1.267 16.620 7.727 2.208 - LGA A 21 A 21 3.725 0 0.700 0.683 6.401 14.545 11.636 - LGA S 22 S 22 3.946 0 0.488 0.477 6.116 23.636 15.758 6.116 LGA L 23 L 23 2.676 0 0.284 0.249 8.916 35.909 17.955 8.916 LGA A 24 A 24 5.251 0 0.444 0.453 7.541 4.545 3.636 - LGA A 25 A 25 6.752 0 0.107 0.101 7.366 0.000 0.000 - LGA N 26 N 26 3.745 0 0.665 0.740 7.467 7.273 5.227 4.603 LGA E 27 E 27 10.404 0 0.317 1.382 14.010 0.000 0.000 13.528 LGA L 28 L 28 12.443 0 0.114 1.443 16.055 0.000 0.000 15.664 LGA R 29 R 29 8.892 2 0.117 1.004 9.896 0.000 0.000 - LGA V 30 V 30 8.119 0 0.209 0.180 8.332 0.000 0.000 7.708 LGA T 31 T 31 7.894 0 0.721 1.116 10.366 0.000 0.000 9.832 LGA E 32 E 32 6.004 0 0.606 1.357 11.092 0.000 0.000 8.517 LGA R 33 R 33 2.705 2 0.416 1.333 10.974 20.909 8.595 - LGA P 34 P 34 8.110 0 0.373 0.642 10.259 0.000 0.000 10.072 LGA F 35 F 35 6.762 0 0.225 1.178 9.483 0.000 0.000 9.483 LGA W 36 W 36 12.284 1 0.349 1.130 20.592 0.000 0.000 - LGA I 37 I 37 17.956 0 0.402 0.832 22.534 0.000 0.000 22.534 LGA S 38 S 38 16.144 0 0.602 0.563 16.749 0.000 0.000 12.333 LGA S 39 S 39 13.549 0 0.733 0.856 15.782 0.000 0.000 14.405 LGA F 40 F 40 20.548 0 0.282 1.217 26.313 0.000 0.000 26.313 LGA I 41 I 41 20.427 0 0.414 0.701 20.873 0.000 0.000 19.422 LGA G 42 G 42 23.923 0 0.268 0.268 24.437 0.000 0.000 - LGA R 43 R 43 23.063 2 0.636 0.868 24.286 0.000 0.000 - LGA S 44 S 44 25.306 0 0.099 0.646 27.120 0.000 0.000 25.756 LGA K 45 K 45 31.355 0 0.656 0.788 40.175 0.000 0.000 40.175 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 334 97.09 44 28 SUMMARY(RMSD_GDC): 11.314 11.188 12.227 8.244 5.876 2.857 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.89 30.682 26.588 0.401 LGA_LOCAL RMSD: 2.893 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.439 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.314 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.398806 * X + -0.914961 * Y + 0.061648 * Z + -2.295714 Y_new = 0.881603 * X + 0.364023 * Y + -0.300440 * Z + 54.040054 Z_new = 0.252449 * X + 0.174166 * Y + 0.951806 * Z + -3.525678 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.145977 -0.255210 0.180983 [DEG: 65.6597 -14.6225 10.3696 ] ZXZ: 0.202384 0.311723 0.966876 [DEG: 11.5957 17.8604 55.3979 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS348_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.89 26.588 11.31 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS348_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 9 N ALA 2 18.842 26.361 15.809 1.00 6.84 ATOM 10 CA ALA 2 18.119 25.861 14.597 1.00 6.39 ATOM 11 C ALA 2 18.812 26.579 13.451 1.00 3.85 ATOM 12 O ALA 2 20.051 26.680 13.464 1.00 3.39 ATOM 13 CB ALA 2 16.631 26.178 14.648 1.00 8.13 ATOM 14 N VAL 3 18.064 27.185 12.536 1.00 3.26 ATOM 15 CA VAL 3 18.746 27.943 11.544 1.00 3.24 ATOM 16 C VAL 3 19.449 29.051 12.503 1.00 3.28 ATOM 17 O VAL 3 18.777 29.332 13.495 1.00 3.88 ATOM 18 CB VAL 3 17.841 28.512 10.497 1.00 2.36 ATOM 19 CG1 VAL 3 17.214 27.298 9.878 1.00 2.26 ATOM 20 CG2 VAL 3 18.552 28.747 9.274 1.00 3.22 ATOM 21 N GLN 4 20.721 29.669 12.347 1.00 4.13 ATOM 22 CA GLN 4 21.887 29.877 11.355 1.00 4.18 ATOM 23 C GLN 4 21.229 30.734 10.287 1.00 3.82 ATOM 24 O GLN 4 21.445 30.577 9.112 1.00 5.87 ATOM 25 CB GLN 4 22.377 28.557 10.759 1.00 6.82 ATOM 26 CG GLN 4 22.916 27.591 11.785 1.00 8.39 ATOM 27 CD GLN 4 23.504 26.336 11.154 1.00 7.40 ATOM 28 OE1 GLN 4 24.255 26.391 10.174 1.00 7.10 ATOM 29 NE2 GLN 4 23.163 25.192 11.725 1.00 7.21 ATOM 30 N GLY 5 20.351 31.634 10.791 1.00 1.90 ATOM 31 CA GLY 5 19.396 32.659 11.202 1.00 0.62 ATOM 32 C GLY 5 18.134 31.838 11.083 1.00 1.87 ATOM 33 O GLY 5 17.893 31.372 9.978 1.00 4.15 ATOM 34 N PRO 6 17.315 31.646 12.105 1.00 1.13 ATOM 35 CA PRO 6 16.122 30.845 11.929 1.00 1.17 ATOM 36 C PRO 6 15.674 31.395 10.625 1.00 1.59 ATOM 37 O PRO 6 15.504 30.652 9.670 1.00 3.27 ATOM 38 CB PRO 6 15.299 31.239 13.150 1.00 1.06 ATOM 39 CG PRO 6 16.396 31.534 14.210 1.00 0.46 ATOM 40 CD PRO 6 17.514 32.231 13.420 1.00 1.11 ATOM 41 N TRP 7 15.740 32.753 10.576 1.00 2.13 ATOM 42 CA TRP 7 15.438 33.654 9.473 1.00 3.38 ATOM 43 C TRP 7 15.344 33.024 8.109 1.00 4.28 ATOM 44 O TRP 7 14.658 33.570 7.259 1.00 6.14 ATOM 45 CB TRP 7 16.461 34.787 9.406 1.00 3.99 ATOM 46 CG TRP 7 16.118 35.786 8.350 1.00 3.72 ATOM 47 CD1 TRP 7 16.779 36.004 7.178 1.00 3.35 ATOM 48 CD2 TRP 7 15.004 36.709 8.362 1.00 4.30 ATOM 49 NE1 TRP 7 16.152 37.002 6.463 1.00 3.17 ATOM 50 CE2 TRP 7 15.063 37.439 7.172 1.00 3.88 ATOM 51 CE3 TRP 7 13.970 36.967 9.273 1.00 5.48 ATOM 52 CZ2 TRP 7 14.131 38.414 6.863 1.00 4.62 ATOM 53 CZ3 TRP 7 13.035 37.940 8.963 1.00 6.38 ATOM 54 N VAL 8 15.925 31.877 7.882 1.00 3.28 ATOM 55 CA VAL 8 15.776 31.197 6.605 1.00 3.50 ATOM 56 C VAL 8 14.210 30.860 6.291 1.00 5.33 ATOM 57 O VAL 8 13.919 30.967 5.100 1.00 6.57 ATOM 58 CB VAL 8 16.609 29.913 6.578 1.00 3.27 ATOM 59 CG1 VAL 8 16.307 29.093 5.363 1.00 4.74 ATOM 60 CG2 VAL 8 18.094 30.300 6.581 1.00 2.85 ATOM 61 N GLY 9 13.145 30.473 7.203 1.00 6.18 ATOM 62 CA GLY 9 12.895 30.250 8.694 1.00 5.98 ATOM 63 C GLY 9 12.435 31.645 9.239 1.00 4.55 ATOM 64 O GLY 9 12.945 31.941 10.326 1.00 5.53 ATOM 65 N SER 10 12.483 32.575 8.259 1.00 2.62 ATOM 66 CA SER 10 11.708 33.809 8.433 1.00 1.16 ATOM 67 C SER 10 10.276 33.236 8.379 1.00 3.07 ATOM 68 O SER 10 10.039 32.720 7.288 1.00 5.15 ATOM 69 CB SER 10 11.958 34.824 7.323 1.00 2.05 ATOM 70 OG SER 10 11.469 34.366 6.086 1.00 3.10 ATOM 71 N SER 11 9.297 33.978 8.956 1.00 2.98 ATOM 72 CA SER 11 8.202 33.158 9.558 1.00 1.93 ATOM 73 C SER 11 9.031 32.007 10.156 1.00 3.18 ATOM 74 O SER 11 10.096 32.264 10.706 1.00 3.72 ATOM 75 CB SER 11 7.280 32.659 8.462 1.00 1.10 ATOM 76 OG SER 11 6.626 33.726 7.808 1.00 1.67 ATOM 77 N TYR 12 8.641 30.761 9.944 1.00 4.19 ATOM 78 CA TYR 12 9.658 29.693 9.907 1.00 6.97 ATOM 79 C TYR 12 9.309 29.322 8.454 1.00 7.53 ATOM 80 O TYR 12 9.991 29.662 7.481 1.00 7.90 ATOM 81 CB TYR 12 9.519 28.582 10.921 1.00 9.07 ATOM 82 CG TYR 12 10.734 27.682 10.839 1.00 10.57 ATOM 83 CD1 TYR 12 11.984 28.198 11.213 1.00 10.78 ATOM 84 CD2 TYR 12 10.634 26.383 10.374 1.00 12.31 ATOM 85 CE1 TYR 12 13.122 27.417 11.117 1.00 12.74 ATOM 86 CE2 TYR 12 11.780 25.595 10.280 1.00 13.87 ATOM 87 CZ TYR 12 13.019 26.112 10.648 1.00 14.11 ATOM 88 N VAL 13 8.124 28.735 8.360 1.00 8.21 ATOM 89 CA VAL 13 7.228 28.677 7.214 1.00 7.59 ATOM 90 C VAL 13 6.031 28.944 8.121 1.00 6.21 ATOM 91 O VAL 13 5.816 30.078 8.547 1.00 6.25 ATOM 92 CB VAL 13 7.230 27.281 6.563 1.00 9.59 ATOM 93 CG1 VAL 13 6.222 27.226 5.449 1.00 10.76 ATOM 94 CG2 VAL 13 8.628 26.983 6.065 1.00 10.69 ATOM 95 N ALA 14 5.568 27.847 8.717 1.00 5.54 ATOM 96 CA ALA 14 4.768 27.773 9.922 1.00 6.30 ATOM 97 C ALA 14 5.964 27.461 10.903 1.00 6.58 ATOM 98 O ALA 14 6.858 26.845 10.330 1.00 7.63 ATOM 99 CB ALA 14 3.720 26.684 9.873 1.00 7.11 ATOM 100 N GLU 15 6.205 27.841 12.241 1.00 6.17 ATOM 101 CA GLU 15 5.627 28.643 13.391 1.00 4.39 ATOM 102 C GLU 15 6.077 30.186 13.294 1.00 2.26 ATOM 103 O GLU 15 7.259 30.387 13.557 1.00 1.10 ATOM 104 CB GLU 15 6.069 28.042 14.727 1.00 6.02 ATOM 105 CG GLU 15 5.498 28.743 15.951 1.00 8.20 ATOM 106 CD GLU 15 5.949 28.123 17.244 1.00 8.42 ATOM 107 OE1 GLU 15 6.677 27.162 17.198 1.00 9.43 ATOM 108 OE2 GLU 15 5.566 28.613 18.280 1.00 8.04 ATOM 109 N THR 16 5.315 31.343 12.998 1.00 2.89 ATOM 110 CA THR 16 3.983 31.806 12.444 1.00 3.81 ATOM 111 C THR 16 2.793 31.108 12.885 1.00 4.22 ATOM 112 O THR 16 1.806 31.769 13.141 1.00 4.62 ATOM 113 CB THR 16 3.973 31.953 10.955 1.00 4.76 ATOM 114 OG1 THR 16 4.226 30.720 10.402 1.00 4.82 ATOM 115 CG2 THR 16 4.961 32.915 10.535 1.00 5.84 ATOM 116 N GLY 17 2.761 29.829 13.001 1.00 4.50 ATOM 117 CA GLY 17 1.893 28.774 13.357 1.00 3.80 ATOM 118 C GLY 17 2.160 27.215 13.206 1.00 2.99 ATOM 119 O GLY 17 3.287 26.860 13.503 1.00 3.60 ATOM 120 N GLN 18 1.182 26.171 12.831 1.00 2.83 ATOM 121 CA GLN 18 -0.272 26.080 12.215 1.00 2.12 ATOM 122 C GLN 18 0.096 27.042 11.099 1.00 1.03 ATOM 123 O GLN 18 1.103 26.796 10.469 1.00 1.11 ATOM 124 CB GLN 18 -1.428 26.571 13.090 1.00 2.93 ATOM 125 CG GLN 18 -1.674 25.729 14.330 1.00 4.36 ATOM 126 CD GLN 18 -0.724 26.074 15.461 1.00 4.49 ATOM 127 OE1 GLN 18 -0.475 27.249 15.745 1.00 3.82 ATOM 128 NE2 GLN 18 -0.190 25.050 16.116 1.00 5.65 ATOM 129 N ASN 19 -0.600 28.124 10.855 1.00 1.13 ATOM 130 CA ASN 19 -0.028 29.031 9.835 1.00 0.96 ATOM 131 C ASN 19 0.517 30.383 10.574 1.00 3.58 ATOM 132 O ASN 19 1.283 31.052 9.901 1.00 5.03 ATOM 133 CB ASN 19 -0.996 29.311 8.700 1.00 1.76 ATOM 134 CG ASN 19 -0.320 29.901 7.484 1.00 3.16 ATOM 135 OD1 ASN 19 0.684 29.376 6.992 1.00 3.97 ATOM 136 ND2 ASN 19 -0.851 30.996 6.983 1.00 5.03 ATOM 137 N TRP 20 0.163 30.927 11.869 1.00 4.45 ATOM 138 CA TRP 20 -0.702 30.629 13.102 1.00 5.32 ATOM 139 C TRP 20 -2.009 30.153 12.492 1.00 5.39 ATOM 140 O TRP 20 -2.745 29.410 13.135 1.00 4.88 ATOM 141 CB TRP 20 -0.838 31.851 13.992 1.00 7.33 ATOM 142 CG TRP 20 0.275 32.114 15.012 1.00 7.83 ATOM 143 CD1 TRP 20 0.968 31.160 15.669 1.00 8.87 ATOM 144 CD2 TRP 20 0.818 33.394 15.505 1.00 7.79 ATOM 145 NE1 TRP 20 1.887 31.716 16.512 1.00 9.71 ATOM 146 CE2 TRP 20 1.810 33.077 16.426 1.00 9.03 ATOM 147 CE3 TRP 20 0.543 34.754 15.248 1.00 7.01 ATOM 148 CZ2 TRP 20 2.532 34.053 17.089 1.00 9.59 ATOM 149 CZ3 TRP 20 1.265 35.722 15.913 1.00 7.29 ATOM 150 N ALA 21 -2.283 30.504 11.215 1.00 6.48 ATOM 151 CA ALA 21 -3.635 30.260 10.742 1.00 8.36 ATOM 152 C ALA 21 -4.084 31.043 11.879 1.00 8.79 ATOM 153 O ALA 21 -3.342 32.007 12.065 1.00 10.09 ATOM 154 CB ALA 21 -4.068 28.798 10.657 1.00 9.03 ATOM 155 N SER 22 -5.042 30.620 12.725 1.00 8.03 ATOM 156 CA SER 22 -5.330 31.390 13.935 1.00 7.66 ATOM 157 C SER 22 -4.768 32.798 13.578 1.00 6.01 ATOM 158 O SER 22 -5.196 33.219 12.513 1.00 5.44 ATOM 159 CB SER 22 -4.800 30.619 15.155 1.00 8.98 ATOM 160 OG SER 22 -3.427 30.625 15.275 1.00 11.24 ATOM 161 N LEU 23 -3.473 33.037 13.942 1.00 5.90 ATOM 162 CA LEU 23 -2.887 34.205 14.553 1.00 5.06 ATOM 163 C LEU 23 -3.535 34.294 15.874 1.00 4.10 ATOM 164 O LEU 23 -3.583 35.333 16.508 1.00 3.36 ATOM 165 CB LEU 23 -3.096 35.415 13.634 1.00 6.30 ATOM 166 CG LEU 23 -2.517 35.275 12.184 1.00 6.91 ATOM 167 CD1 LEU 23 -2.975 36.425 11.368 1.00 8.58 ATOM 168 CD2 LEU 23 -0.998 35.279 12.209 1.00 5.96 ATOM 169 N ALA 24 -3.943 33.111 16.331 1.00 4.17 ATOM 170 CA ALA 24 -4.776 32.815 17.494 1.00 4.29 ATOM 171 C ALA 24 -6.150 33.161 16.986 1.00 4.51 ATOM 172 O ALA 24 -6.629 32.604 15.980 1.00 5.53 ATOM 173 CB ALA 24 -4.392 33.658 18.733 1.00 4.35 ATOM 174 N ALA 25 -6.771 34.096 17.616 1.00 4.80 ATOM 175 CA ALA 25 -7.726 35.148 17.701 1.00 3.87 ATOM 176 C ALA 25 -7.119 36.296 16.926 1.00 2.81 ATOM 177 O ALA 25 -7.791 37.138 16.405 1.00 2.48 ATOM 178 CB ALA 25 -8.073 35.503 19.141 1.00 3.87 ATOM 179 N ASN 26 -5.801 36.407 16.824 1.00 2.94 ATOM 180 CA ASN 26 -5.419 37.566 16.050 1.00 2.99 ATOM 181 C ASN 26 -6.055 37.217 14.712 1.00 3.16 ATOM 182 O ASN 26 -6.449 36.059 14.480 1.00 3.05 ATOM 183 CB ASN 26 -3.944 37.912 16.046 1.00 3.92 ATOM 184 CG ASN 26 -3.666 39.332 15.531 1.00 2.67 ATOM 185 OD1 ASN 26 -4.557 40.009 14.978 1.00 2.99 ATOM 186 ND2 ASN 26 -2.445 39.788 15.714 1.00 2.39 ATOM 187 N GLU 27 -6.304 38.241 13.934 1.00 4.19 ATOM 188 CA GLU 27 -7.064 38.161 12.702 1.00 3.95 ATOM 189 C GLU 27 -8.366 37.486 12.974 1.00 1.82 ATOM 190 O GLU 27 -8.855 36.734 12.151 1.00 2.61 ATOM 191 CB GLU 27 -6.272 37.483 11.605 1.00 6.13 ATOM 192 CG GLU 27 -6.786 37.775 10.197 1.00 8.00 ATOM 193 CD GLU 27 -5.893 37.226 9.108 1.00 9.98 ATOM 194 OE1 GLU 27 -4.780 37.679 9.000 1.00 10.91 ATOM 195 OE2 GLU 27 -6.331 36.369 8.380 1.00 10.83 ATOM 196 N LEU 28 -8.928 37.737 14.137 1.00 0.98 ATOM 197 CA LEU 28 -10.012 37.676 15.084 1.00 0.89 ATOM 198 C LEU 28 -9.864 38.662 16.229 1.00 1.81 ATOM 199 O LEU 28 -10.817 38.941 16.935 1.00 3.79 ATOM 200 CB LEU 28 -10.302 36.247 15.537 1.00 1.02 ATOM 201 CG LEU 28 -11.395 36.119 16.593 1.00 0.99 ATOM 202 CD1 LEU 28 -12.678 36.651 16.006 1.00 3.06 ATOM 203 CD2 LEU 28 -11.561 34.656 17.026 1.00 1.83 ATOM 204 N ARG 29 -8.654 39.153 16.446 1.00 0.62 ATOM 205 CA ARG 29 -8.403 40.275 17.351 1.00 0.80 ATOM 206 C ARG 29 -8.285 41.436 16.322 1.00 1.84 ATOM 207 O ARG 29 -7.409 42.270 16.559 1.00 2.89 ATOM 208 CB ARG 29 -7.139 40.106 18.182 1.00 1.21 ATOM 209 CG ARG 29 -7.166 38.941 19.157 1.00 0.75 ATOM 210 CD ARG 29 -5.910 38.856 19.947 1.00 1.11 ATOM 211 NE ARG 29 -5.930 37.742 20.880 1.00 0.60 ATOM 212 CZ ARG 29 -4.937 37.448 21.742 1.00 1.54 ATOM 213 N VAL 30 -8.364 40.954 15.056 1.00 1.96 ATOM 214 CA VAL 30 -8.990 41.774 13.993 1.00 1.84 ATOM 215 C VAL 30 -10.492 41.502 14.164 1.00 1.50 ATOM 216 O VAL 30 -11.158 40.817 13.391 1.00 1.26 ATOM 217 CB VAL 30 -8.487 41.425 12.598 1.00 2.11 ATOM 218 CG1 VAL 30 -9.080 42.347 11.608 1.00 2.98 ATOM 219 CG2 VAL 30 -6.975 41.573 12.566 1.00 2.60 ATOM 220 N THR 31 -10.949 42.083 15.231 1.00 1.97 ATOM 221 CA THR 31 -12.262 42.289 15.787 1.00 4.00 ATOM 222 C THR 31 -11.935 43.743 16.020 1.00 5.11 ATOM 223 O THR 31 -11.481 44.219 14.994 1.00 6.93 ATOM 224 CB THR 31 -12.586 41.486 17.046 1.00 4.66 ATOM 225 OG1 THR 31 -12.607 40.113 16.711 1.00 5.86 ATOM 226 CG2 THR 31 -13.892 41.889 17.646 1.00 7.14 ATOM 227 N GLU 32 -11.274 44.054 17.185 1.00 5.04 ATOM 228 CA GLU 32 -11.461 45.447 17.655 1.00 5.58 ATOM 229 C GLU 32 -10.813 46.186 16.490 1.00 4.64 ATOM 230 O GLU 32 -11.093 47.346 16.208 1.00 6.27 ATOM 231 CB GLU 32 -10.781 45.747 18.993 1.00 7.98 ATOM 232 CG GLU 32 -11.403 45.038 20.188 1.00 10.13 ATOM 233 CD GLU 32 -10.694 45.337 21.479 1.00 12.40 ATOM 234 OE1 GLU 32 -9.691 46.009 21.443 1.00 12.93 ATOM 235 OE2 GLU 32 -11.155 44.892 22.503 1.00 13.70 ATOM 236 N ARG 33 -9.894 45.444 15.854 1.00 3.45 ATOM 237 CA ARG 33 -9.091 45.837 14.723 1.00 2.26 ATOM 238 C ARG 33 -8.602 47.189 15.085 1.00 2.04 ATOM 239 O ARG 33 -8.542 48.058 14.225 1.00 2.67 ATOM 240 CB ARG 33 -9.880 45.877 13.422 1.00 4.06 ATOM 241 CG ARG 33 -9.054 46.187 12.184 1.00 5.69 ATOM 242 CD ARG 33 -9.885 46.172 10.952 1.00 7.68 ATOM 243 NE ARG 33 -10.864 47.248 10.945 1.00 9.20 ATOM 244 CZ ARG 33 -11.897 47.336 10.086 1.00 11.38 ATOM 245 N PRO 34 -8.172 47.396 16.346 1.00 2.78 ATOM 246 CA PRO 34 -7.794 48.656 16.879 1.00 2.75 ATOM 247 C PRO 34 -6.416 48.702 16.317 1.00 1.78 ATOM 248 O PRO 34 -5.476 48.582 17.061 1.00 2.44 ATOM 249 CB PRO 34 -7.779 48.415 18.375 1.00 3.93 ATOM 250 CG PRO 34 -7.259 46.986 18.485 1.00 4.48 ATOM 251 CD PRO 34 -7.765 46.260 17.239 1.00 4.28 ATOM 252 N PHE 35 -6.259 48.749 15.013 1.00 1.99 ATOM 253 CA PHE 35 -4.931 48.670 14.424 1.00 1.58 ATOM 254 C PHE 35 -4.871 50.169 14.010 1.00 1.92 ATOM 255 O PHE 35 -5.571 50.349 13.020 1.00 3.24 ATOM 256 CB PHE 35 -4.864 47.698 13.252 1.00 1.55 ATOM 257 CG PHE 35 -3.462 47.396 12.792 1.00 1.33 ATOM 258 CD1 PHE 35 -2.566 46.772 13.649 1.00 1.79 ATOM 259 CD2 PHE 35 -3.037 47.718 11.508 1.00 0.95 ATOM 260 CE1 PHE 35 -1.279 46.482 13.237 1.00 2.01 ATOM 261 CE2 PHE 35 -1.752 47.424 11.097 1.00 1.25 ATOM 262 CZ PHE 35 -0.873 46.807 11.964 1.00 1.80 ATOM 263 N TRP 36 -4.845 51.230 14.980 1.00 1.87 ATOM 264 CA TRP 36 -5.561 51.747 16.295 1.00 1.56 ATOM 265 C TRP 36 -5.876 53.114 15.732 1.00 1.31 ATOM 266 O TRP 36 -5.994 53.193 14.520 1.00 2.67 ATOM 267 CB TRP 36 -4.690 51.825 17.550 1.00 3.59 ATOM 268 CG TRP 36 -5.448 52.225 18.780 1.00 4.38 ATOM 269 CD1 TRP 36 -6.772 52.015 19.026 1.00 6.16 ATOM 270 CD2 TRP 36 -4.928 52.908 19.946 1.00 4.07 ATOM 271 NE1 TRP 36 -7.110 52.520 20.257 1.00 7.11 ATOM 272 CE2 TRP 36 -5.994 53.069 20.835 1.00 5.68 ATOM 273 CE3 TRP 36 -3.661 53.389 20.301 1.00 3.17 ATOM 274 CZ2 TRP 36 -5.838 53.693 22.062 1.00 5.88 ATOM 275 CZ3 TRP 36 -3.505 54.014 21.532 1.00 3.11 ATOM 276 N ILE 37 -6.238 54.139 16.497 1.00 2.27 ATOM 277 CA ILE 37 -6.069 55.408 15.766 1.00 4.04 ATOM 278 C ILE 37 -4.520 55.118 15.490 1.00 3.10 ATOM 279 O ILE 37 -4.259 54.539 14.432 1.00 2.66 ATOM 280 CB ILE 37 -6.394 56.649 16.630 1.00 6.68 ATOM 281 CG1 ILE 37 -7.889 56.650 17.029 1.00 8.06 ATOM 282 CG2 ILE 37 -5.515 56.701 17.872 1.00 8.37 ATOM 283 CD1 ILE 37 -8.265 56.781 15.568 1.00 9.35 ATOM 284 N SER 38 -3.828 54.655 16.592 1.00 3.23 ATOM 285 CA SER 38 -2.398 54.766 16.367 1.00 3.92 ATOM 286 C SER 38 -2.462 55.713 15.241 1.00 5.04 ATOM 287 O SER 38 -3.087 56.752 15.454 1.00 6.86 ATOM 288 CB SER 38 -1.729 53.444 16.012 1.00 4.39 ATOM 289 OG SER 38 -2.268 52.885 14.833 1.00 3.98 ATOM 290 N SER 39 -1.995 55.321 14.006 1.00 4.60 ATOM 291 CA SER 39 -2.078 56.315 12.931 1.00 3.24 ATOM 292 C SER 39 -1.733 57.372 13.882 1.00 2.61 ATOM 293 O SER 39 -0.804 57.115 14.627 1.00 4.06 ATOM 294 CB SER 39 -3.476 56.450 12.350 1.00 3.10 ATOM 295 OG SER 39 -3.475 57.249 11.200 1.00 4.16 ATOM 296 N PHE 40 -2.513 58.452 13.923 1.00 1.90 ATOM 297 CA PHE 40 -2.726 59.322 15.121 1.00 3.02 ATOM 298 C PHE 40 -1.907 59.046 16.413 1.00 2.92 ATOM 299 O PHE 40 -2.348 59.413 17.503 1.00 4.07 ATOM 300 CB PHE 40 -4.199 59.326 15.546 1.00 3.73 ATOM 301 CG PHE 40 -4.448 60.256 16.702 1.00 4.56 ATOM 302 CD1 PHE 40 -4.626 61.611 16.498 1.00 4.53 ATOM 303 CD2 PHE 40 -4.469 59.789 18.002 1.00 5.60 ATOM 304 CE1 PHE 40 -4.838 62.473 17.559 1.00 5.45 ATOM 305 CE2 PHE 40 -4.677 60.638 19.063 1.00 6.38 ATOM 306 CZ PHE 40 -4.863 61.983 18.841 1.00 6.27 ATOM 307 N ILE 41 -0.689 58.524 16.313 1.00 2.82 ATOM 308 CA ILE 41 0.243 58.732 17.384 1.00 3.24 ATOM 309 C ILE 41 -0.006 60.090 16.905 1.00 3.05 ATOM 310 O ILE 41 -0.104 60.161 15.704 1.00 4.79 ATOM 311 CB ILE 41 1.665 58.215 17.112 1.00 5.07 ATOM 312 CG1 ILE 41 1.632 56.677 16.874 1.00 6.81 ATOM 313 CG2 ILE 41 2.574 58.578 18.261 1.00 5.16 ATOM 314 CD1 ILE 41 1.100 55.862 18.030 1.00 8.76 ATOM 315 N GLY 42 -0.189 61.131 17.701 1.00 2.45 ATOM 316 CA GLY 42 -0.831 62.360 17.155 1.00 3.29 ATOM 317 C GLY 42 -1.154 62.285 15.646 1.00 3.96 ATOM 318 O GLY 42 -2.300 62.447 15.240 1.00 4.93 ATOM 319 N ARG 43 -0.152 62.071 14.861 1.00 4.53 ATOM 320 CA ARG 43 -0.110 61.651 13.483 1.00 3.97 ATOM 321 C ARG 43 1.147 60.575 13.530 1.00 1.49 ATOM 322 O ARG 43 1.100 59.665 12.701 1.00 1.61 ATOM 323 CB ARG 43 0.125 62.822 12.541 1.00 6.66 ATOM 324 CG ARG 43 -0.988 63.859 12.519 1.00 9.02 ATOM 325 CD ARG 43 -2.224 63.322 11.896 1.00 11.61 ATOM 326 NE ARG 43 -3.284 64.317 11.851 1.00 12.13 ATOM 327 CZ ARG 43 -4.183 64.521 12.833 1.00 13.64 ATOM 328 N SER 44 2.297 60.578 14.464 1.00 0.86 ATOM 329 CA SER 44 2.816 61.402 15.677 1.00 1.44 ATOM 330 C SER 44 2.499 62.779 15.151 1.00 2.65 ATOM 331 O SER 44 2.715 62.994 13.990 1.00 4.45 ATOM 332 CB SER 44 4.295 61.240 15.972 1.00 2.29 ATOM 333 OG SER 44 4.692 62.077 17.023 1.00 2.99 ATOM 334 N LYS 45 1.921 63.707 15.904 1.00 2.20 ATOM 335 CA LYS 45 1.665 64.977 15.218 1.00 2.39 ATOM 336 C LYS 45 2.997 65.546 14.797 1.00 2.96 ATOM 337 O LYS 45 3.043 66.499 14.044 1.00 3.39 ATOM 338 CB LYS 45 0.913 65.964 16.112 1.00 2.20 ATOM 339 CG LYS 45 1.719 66.478 17.298 1.00 0.88 ATOM 340 CD LYS 45 0.894 67.423 18.160 1.00 2.85 ATOM 341 CE LYS 45 1.707 67.959 19.329 1.00 2.23 ATOM 342 NZ LYS 45 0.903 68.859 20.200 1.00 4.62 TER END