####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 334), selected 44 , name T0953s2TS348_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 10 - 33 4.92 11.68 LCS_AVERAGE: 49.12 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 16 - 23 1.47 14.37 LCS_AVERAGE: 13.74 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 16 - 20 0.97 14.14 LCS_AVERAGE: 7.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 7 23 3 3 4 5 7 7 8 12 15 17 19 21 21 22 22 23 24 26 27 28 LCS_GDT V 3 V 3 3 7 23 3 3 4 5 7 7 11 13 15 17 19 21 21 22 22 23 24 26 27 28 LCS_GDT Q 4 Q 4 4 7 23 3 4 4 5 7 7 11 13 15 17 19 21 21 22 23 23 24 26 29 31 LCS_GDT G 5 G 5 4 7 23 2 4 4 5 7 9 11 13 16 17 19 21 23 26 28 30 31 31 31 31 LCS_GDT P 6 P 6 4 7 23 3 4 4 5 7 9 11 13 16 17 19 21 24 26 28 30 31 31 31 31 LCS_GDT W 7 W 7 4 7 23 3 4 4 6 7 7 11 13 16 17 19 21 24 26 28 30 31 31 31 31 LCS_GDT V 8 V 8 4 7 23 3 4 4 6 7 9 11 13 16 17 19 21 24 26 28 30 31 31 31 31 LCS_GDT G 9 G 9 4 6 23 3 4 4 6 7 9 11 13 16 17 19 21 24 26 28 30 31 31 31 31 LCS_GDT S 10 S 10 4 6 24 3 4 4 6 7 9 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT S 11 S 11 3 6 24 1 4 6 8 10 11 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT Y 12 Y 12 3 6 24 3 4 4 5 6 7 10 13 16 17 19 21 24 26 28 30 31 31 31 31 LCS_GDT V 13 V 13 3 4 24 3 4 4 6 7 9 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT A 14 A 14 3 7 24 3 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT E 15 E 15 3 7 24 1 3 3 5 6 7 9 12 14 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT T 16 T 16 5 8 24 1 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT G 17 G 17 5 8 24 2 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT Q 18 Q 18 5 8 24 3 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT N 19 N 19 5 8 24 3 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT W 20 W 20 5 8 24 3 4 6 8 10 11 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT A 21 A 21 4 8 24 3 4 6 8 10 11 11 12 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT S 22 S 22 4 8 24 3 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT L 23 L 23 4 8 24 3 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT A 24 A 24 3 4 24 3 3 4 6 7 10 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT A 25 A 25 3 4 24 3 3 4 6 7 10 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT N 26 N 26 3 4 24 1 3 4 5 7 10 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT E 27 E 27 3 5 24 3 3 4 5 5 6 9 10 12 16 17 17 18 22 26 27 31 31 31 31 LCS_GDT L 28 L 28 4 5 24 4 4 4 6 7 10 11 12 13 16 19 22 24 26 28 30 31 31 31 31 LCS_GDT R 29 R 29 4 5 24 4 4 4 6 7 10 11 12 13 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT V 30 V 30 4 5 24 4 4 4 6 7 10 11 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT T 31 T 31 4 5 24 4 4 4 6 7 10 11 12 14 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT E 32 E 32 3 5 24 3 3 3 4 6 6 8 12 15 17 19 22 24 26 28 30 31 31 31 31 LCS_GDT R 33 R 33 3 5 24 2 3 4 5 9 11 11 12 14 16 19 22 24 26 28 30 31 31 31 31 LCS_GDT P 34 P 34 3 5 20 0 3 4 4 6 6 9 10 11 13 16 17 20 24 27 30 31 31 31 31 LCS_GDT F 35 F 35 3 5 20 2 3 4 7 7 8 9 10 11 14 19 22 23 25 27 30 31 31 31 31 LCS_GDT W 36 W 36 3 5 20 3 3 4 7 7 8 9 10 10 11 12 15 18 21 26 27 29 29 29 31 LCS_GDT I 37 I 37 4 6 16 3 4 5 7 7 8 9 10 10 11 11 13 15 18 22 27 29 29 29 31 LCS_GDT S 38 S 38 4 6 16 3 4 5 5 6 7 8 9 10 11 12 15 18 20 22 27 29 29 29 31 LCS_GDT S 39 S 39 4 6 15 3 4 5 5 6 8 8 9 10 11 11 11 12 15 22 24 29 29 29 31 LCS_GDT F 40 F 40 4 6 14 3 4 5 7 7 8 9 10 10 11 11 11 12 14 15 16 18 21 24 25 LCS_GDT I 41 I 41 3 6 14 3 3 4 7 7 8 9 10 10 11 11 11 12 14 15 16 18 21 24 25 LCS_GDT G 42 G 42 3 6 14 1 3 5 7 7 8 9 10 10 11 11 11 12 13 15 16 17 19 22 25 LCS_GDT R 43 R 43 3 5 14 0 3 4 7 7 8 9 10 10 11 11 11 12 13 15 16 16 19 21 24 LCS_GDT S 44 S 44 0 5 14 0 0 4 5 6 7 8 10 10 11 11 11 12 13 13 13 14 15 15 16 LCS_GDT K 45 K 45 0 3 14 0 0 3 3 4 7 8 8 8 10 11 11 11 13 13 13 14 14 14 15 LCS_AVERAGE LCS_A: 23.61 ( 7.95 13.74 49.12 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 6 8 10 11 11 13 16 17 19 22 24 26 28 30 31 31 31 31 GDT PERCENT_AT 9.09 9.09 13.64 18.18 22.73 25.00 25.00 29.55 36.36 38.64 43.18 50.00 54.55 59.09 63.64 68.18 70.45 70.45 70.45 70.45 GDT RMS_LOCAL 0.37 0.33 1.00 1.33 1.71 1.93 1.93 2.84 3.37 3.51 3.86 4.48 4.96 5.28 5.48 5.76 5.87 5.87 5.87 5.87 GDT RMS_ALL_AT 15.45 20.05 14.04 14.00 13.27 12.87 12.87 21.07 15.99 18.77 18.26 11.68 11.81 12.18 12.31 12.45 12.43 12.43 12.43 12.43 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.424 0 0.137 0.126 7.533 1.818 5.091 - LGA V 3 V 3 3.493 0 0.121 0.139 4.711 22.273 18.182 3.117 LGA Q 4 Q 4 3.355 0 0.665 0.540 6.032 13.636 6.869 6.032 LGA G 5 G 5 1.554 0 0.259 0.259 4.316 37.273 37.273 - LGA P 6 P 6 3.320 0 0.458 0.434 4.192 20.455 14.805 3.614 LGA W 7 W 7 4.289 1 0.437 0.362 13.695 22.273 6.364 - LGA V 8 V 8 3.640 0 0.670 1.008 4.617 19.545 17.143 3.323 LGA G 9 G 9 1.789 0 0.288 0.288 3.994 34.545 34.545 - LGA S 10 S 10 2.382 0 0.272 0.350 3.684 31.818 32.121 2.466 LGA S 11 S 11 5.200 0 0.064 0.715 9.640 5.909 3.939 9.640 LGA Y 12 Y 12 3.928 1 0.116 0.511 7.509 17.273 6.061 - LGA V 13 V 13 1.631 0 0.469 0.917 3.871 38.636 34.026 3.326 LGA A 14 A 14 2.737 0 0.177 0.188 4.877 14.545 12.727 - LGA E 15 E 15 8.010 0 0.684 1.086 14.905 0.000 0.000 14.905 LGA T 16 T 16 3.121 0 0.390 1.066 5.203 33.636 37.403 2.105 LGA G 17 G 17 1.329 0 0.149 0.149 2.974 49.091 49.091 - LGA Q 18 Q 18 2.995 0 0.600 1.048 7.096 16.818 28.687 2.713 LGA N 19 N 19 6.503 0 0.670 1.080 9.093 0.455 0.227 6.215 LGA W 20 W 20 8.770 1 0.415 0.298 15.251 0.000 0.000 - LGA A 21 A 21 9.237 0 0.298 0.299 11.140 0.000 0.000 - LGA S 22 S 22 11.255 0 0.510 0.615 12.479 0.000 0.000 11.793 LGA L 23 L 23 7.404 0 0.667 0.576 11.139 0.000 7.045 2.616 LGA A 24 A 24 12.504 0 0.363 0.377 14.941 0.000 0.000 - LGA A 25 A 25 17.828 0 0.123 0.131 19.592 0.000 0.000 - LGA N 26 N 26 16.381 0 0.193 0.895 19.664 0.000 0.000 15.000 LGA E 27 E 27 20.201 0 0.040 1.057 22.203 0.000 0.000 19.586 LGA L 28 L 28 21.045 0 0.391 1.412 23.735 0.000 0.000 18.189 LGA R 29 R 29 24.685 2 0.149 0.223 26.631 0.000 0.000 - LGA V 30 V 30 25.644 0 0.314 0.394 25.981 0.000 0.000 25.730 LGA T 31 T 31 28.982 0 0.280 1.081 31.851 0.000 0.000 31.851 LGA E 32 E 32 27.785 0 0.613 1.489 28.797 0.000 0.000 28.449 LGA R 33 R 33 23.864 2 0.507 0.830 27.735 0.000 0.000 - LGA P 34 P 34 23.832 0 0.489 0.510 27.589 0.000 0.000 21.450 LGA F 35 F 35 25.145 0 0.419 1.308 26.241 0.000 0.000 17.240 LGA W 36 W 36 29.238 1 0.463 1.027 33.170 0.000 0.000 - LGA I 37 I 37 26.033 0 0.046 0.861 26.885 0.000 0.000 24.281 LGA S 38 S 38 28.915 0 0.160 0.660 31.521 0.000 0.000 28.380 LGA S 39 S 39 29.950 0 0.353 0.653 32.889 0.000 0.000 26.463 LGA F 40 F 40 33.262 0 0.756 1.325 35.609 0.000 0.000 33.528 LGA I 41 I 41 36.545 0 0.147 0.189 40.743 0.000 0.000 33.925 LGA G 42 G 42 42.099 0 0.144 0.144 43.118 0.000 0.000 - LGA R 43 R 43 38.474 2 0.546 1.411 39.561 0.000 0.000 - LGA S 44 S 44 43.008 0 0.578 0.536 45.323 0.000 0.000 45.006 LGA K 45 K 45 42.942 0 0.587 0.756 45.487 0.000 0.000 45.096 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 334 97.09 44 28 SUMMARY(RMSD_GDC): 11.243 11.164 11.928 8.636 7.991 7.013 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.84 31.250 27.039 0.442 LGA_LOCAL RMSD: 2.843 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.066 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.243 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.449546 * X + -0.842573 * Y + -0.296612 * Z + -9.569957 Y_new = 0.565363 * X + -0.525467 * Y + 0.635805 * Z + 16.022041 Z_new = -0.691572 * X + 0.118130 * Y + 0.712582 * Z + -13.187626 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.242570 0.763664 0.164284 [DEG: 128.4898 43.7547 9.4128 ] ZXZ: -2.705091 0.777625 -1.401615 [DEG: -154.9903 44.5546 -80.3066 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS348_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS348_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.84 27.039 11.24 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS348_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 9.633 42.082 11.208 1.00 6.84 ATOM 10 CA ALA 2 10.882 41.189 11.175 1.00 6.39 ATOM 11 C ALA 2 10.379 40.074 10.325 1.00 3.85 ATOM 12 O ALA 2 9.170 39.973 10.218 1.00 3.39 ATOM 13 CB ALA 2 11.336 40.737 12.547 1.00 8.13 ATOM 14 N VAL 3 11.221 39.315 9.655 1.00 3.26 ATOM 15 CA VAL 3 10.684 38.260 8.811 1.00 3.24 ATOM 16 C VAL 3 10.072 39.083 7.659 1.00 3.28 ATOM 17 O VAL 3 9.018 39.717 7.765 1.00 3.88 ATOM 18 CB VAL 3 9.745 37.377 9.658 1.00 2.36 ATOM 19 CG1 VAL 3 9.203 36.376 8.910 1.00 2.26 ATOM 20 CG2 VAL 3 10.541 36.787 10.798 1.00 3.22 ATOM 21 N GLN 4 10.910 39.225 6.625 1.00 4.13 ATOM 22 CA GLN 4 10.940 40.389 5.718 1.00 4.18 ATOM 23 C GLN 4 9.634 40.609 5.011 1.00 3.82 ATOM 24 O GLN 4 9.293 41.720 4.642 1.00 5.87 ATOM 25 CB GLN 4 12.024 40.220 4.662 1.00 6.82 ATOM 26 CG GLN 4 13.428 40.290 5.183 1.00 8.39 ATOM 27 CD GLN 4 14.425 40.057 4.084 1.00 7.40 ATOM 28 OE1 GLN 4 14.100 39.452 3.056 1.00 7.10 ATOM 29 NE2 GLN 4 15.645 40.538 4.271 1.00 7.21 ATOM 30 N GLY 5 8.945 39.531 4.776 1.00 1.90 ATOM 31 CA GLY 5 7.706 39.423 4.027 1.00 0.62 ATOM 32 C GLY 5 7.499 37.990 4.194 1.00 1.87 ATOM 33 O GLY 5 7.558 37.582 5.336 1.00 4.15 ATOM 34 N PRO 6 7.234 37.259 3.106 1.00 1.13 ATOM 35 CA PRO 6 7.074 35.830 2.930 1.00 1.17 ATOM 36 C PRO 6 8.530 35.072 2.900 1.00 1.59 ATOM 37 O PRO 6 8.898 34.726 1.787 1.00 3.27 ATOM 38 CB PRO 6 6.365 35.732 1.578 1.00 1.06 ATOM 39 CG PRO 6 6.872 36.900 0.797 1.00 0.46 ATOM 40 CD PRO 6 7.067 38.001 1.825 1.00 1.11 ATOM 41 N TRP 7 9.459 34.798 3.958 1.00 2.13 ATOM 42 CA TRP 7 9.636 35.057 5.459 1.00 3.38 ATOM 43 C TRP 7 8.252 35.027 6.066 1.00 4.28 ATOM 44 O TRP 7 7.322 35.403 5.380 1.00 6.14 ATOM 45 CB TRP 7 10.315 36.370 5.679 1.00 3.99 ATOM 46 CG TRP 7 11.727 36.402 5.317 1.00 3.72 ATOM 47 CD1 TRP 7 12.279 36.730 4.119 1.00 3.35 ATOM 48 CD2 TRP 7 12.815 36.126 6.200 1.00 4.30 ATOM 49 NE1 TRP 7 13.644 36.676 4.205 1.00 3.17 ATOM 50 CE2 TRP 7 13.989 36.318 5.478 1.00 3.88 ATOM 51 CE3 TRP 7 12.887 35.740 7.532 1.00 5.48 ATOM 52 CZ2 TRP 7 15.233 36.150 6.054 1.00 4.62 ATOM 53 CZ3 TRP 7 14.117 35.572 8.114 1.00 6.38 ATOM 54 N VAL 8 8.058 34.563 7.309 1.00 3.28 ATOM 55 CA VAL 8 6.668 34.451 7.748 1.00 3.50 ATOM 56 C VAL 8 6.136 33.982 6.383 1.00 5.33 ATOM 57 O VAL 8 6.973 33.225 5.888 1.00 6.57 ATOM 58 CB VAL 8 6.029 35.760 8.298 1.00 3.27 ATOM 59 CG1 VAL 8 4.569 35.520 8.614 1.00 4.74 ATOM 60 CG2 VAL 8 6.162 36.856 7.340 1.00 2.85 ATOM 61 N GLY 9 4.876 33.569 6.252 1.00 6.18 ATOM 62 CA GLY 9 4.292 33.809 4.909 1.00 5.98 ATOM 63 C GLY 9 4.906 32.867 3.906 1.00 4.55 ATOM 64 O GLY 9 4.516 32.849 2.749 1.00 5.53 ATOM 65 N SER 10 5.852 32.043 4.374 1.00 2.62 ATOM 66 CA SER 10 6.626 31.121 3.569 1.00 1.16 ATOM 67 C SER 10 6.165 29.660 3.899 1.00 3.07 ATOM 68 O SER 10 6.987 28.757 3.755 1.00 5.15 ATOM 69 CB SER 10 8.106 31.302 3.843 1.00 2.05 ATOM 70 OG SER 10 8.398 31.080 5.195 1.00 3.10 ATOM 71 N SER 11 4.890 29.386 4.372 1.00 2.98 ATOM 72 CA SER 11 3.493 29.637 4.892 1.00 1.93 ATOM 73 C SER 11 3.757 30.803 5.964 1.00 3.18 ATOM 74 O SER 11 2.947 31.719 5.985 1.00 3.72 ATOM 75 CB SER 11 2.865 28.373 5.445 1.00 1.10 ATOM 76 OG SER 11 2.735 27.380 4.469 1.00 1.67 ATOM 77 N TYR 12 4.893 30.934 6.874 1.00 4.19 ATOM 78 CA TYR 12 6.112 30.151 7.379 1.00 6.97 ATOM 79 C TYR 12 5.256 29.010 8.068 1.00 7.53 ATOM 80 O TYR 12 5.812 27.936 8.204 1.00 7.90 ATOM 81 CB TYR 12 6.938 31.008 8.338 1.00 9.07 ATOM 82 CG TYR 12 6.331 31.274 9.728 1.00 10.57 ATOM 83 CD1 TYR 12 6.793 30.581 10.825 1.00 10.78 ATOM 84 CD2 TYR 12 5.280 32.174 9.887 1.00 12.31 ATOM 85 CE1 TYR 12 6.260 30.828 12.075 1.00 12.74 ATOM 86 CE2 TYR 12 4.737 32.405 11.135 1.00 13.87 ATOM 87 CZ TYR 12 5.232 31.742 12.227 1.00 14.11 ATOM 88 N VAL 13 3.881 29.172 8.532 1.00 8.21 ATOM 89 CA VAL 13 2.692 30.196 8.639 1.00 7.59 ATOM 90 C VAL 13 2.385 29.987 10.135 1.00 6.21 ATOM 91 O VAL 13 1.185 29.871 10.317 1.00 6.25 ATOM 92 CB VAL 13 1.467 29.876 7.772 1.00 9.59 ATOM 93 CG1 VAL 13 0.478 28.808 7.922 1.00 10.76 ATOM 94 CG2 VAL 13 0.816 31.225 7.800 1.00 10.69 ATOM 95 N ALA 14 3.286 29.220 11.001 1.00 5.54 ATOM 96 CA ALA 14 4.196 27.916 11.053 1.00 6.30 ATOM 97 C ALA 14 3.432 26.515 10.684 1.00 6.58 ATOM 98 O ALA 14 4.216 25.616 10.409 1.00 7.63 ATOM 99 CB ALA 14 4.811 27.755 12.434 1.00 7.11 ATOM 100 N GLU 15 2.035 26.201 10.649 1.00 6.17 ATOM 101 CA GLU 15 0.650 26.858 10.748 1.00 4.39 ATOM 102 C GLU 15 0.893 27.891 11.889 1.00 2.26 ATOM 103 O GLU 15 2.028 27.906 12.285 1.00 1.10 ATOM 104 CB GLU 15 -0.409 25.793 10.904 1.00 6.02 ATOM 105 CG GLU 15 -0.364 24.865 9.676 1.00 8.20 ATOM 106 CD GLU 15 -0.765 25.559 8.353 1.00 8.42 ATOM 107 OE1 GLU 15 0.007 25.495 7.427 1.00 9.43 ATOM 108 OE2 GLU 15 -1.830 26.108 8.276 1.00 8.04 ATOM 109 N THR 16 0.030 28.722 12.496 1.00 2.89 ATOM 110 CA THR 16 1.038 29.569 13.251 1.00 3.81 ATOM 111 C THR 16 1.576 28.864 14.524 1.00 4.22 ATOM 112 O THR 16 1.410 29.342 15.632 1.00 4.62 ATOM 113 CB THR 16 0.433 30.926 13.654 1.00 4.76 ATOM 114 OG1 THR 16 0.026 31.639 12.479 1.00 4.82 ATOM 115 CG2 THR 16 1.451 31.758 14.421 1.00 5.84 ATOM 116 N GLY 17 2.094 27.661 14.368 1.00 4.50 ATOM 117 CA GLY 17 2.448 26.826 15.451 1.00 3.80 ATOM 118 C GLY 17 1.034 26.349 15.791 1.00 2.99 ATOM 119 O GLY 17 0.833 25.542 16.674 1.00 3.60 ATOM 120 N GLN 18 0.042 26.856 15.054 1.00 2.83 ATOM 121 CA GLN 18 -1.298 26.516 15.303 1.00 2.12 ATOM 122 C GLN 18 -1.253 25.056 14.998 1.00 1.03 ATOM 123 O GLN 18 -1.927 24.301 15.660 1.00 1.11 ATOM 124 CB GLN 18 -2.293 27.282 14.427 1.00 2.93 ATOM 125 CG GLN 18 -2.393 28.763 14.747 1.00 4.36 ATOM 126 CD GLN 18 -3.353 29.491 13.825 1.00 4.49 ATOM 127 OE1 GLN 18 -3.551 29.093 12.673 1.00 3.82 ATOM 128 NE2 GLN 18 -3.954 30.564 14.325 1.00 5.65 ATOM 129 N ASN 19 -0.370 24.587 14.058 1.00 1.13 ATOM 130 CA ASN 19 -0.611 23.210 13.618 1.00 0.96 ATOM 131 C ASN 19 -2.028 23.575 13.592 1.00 3.58 ATOM 132 O ASN 19 -2.295 24.654 13.065 1.00 5.03 ATOM 133 CB ASN 19 -0.213 22.172 14.652 1.00 1.76 ATOM 134 CG ASN 19 1.271 22.199 14.986 1.00 3.16 ATOM 135 OD1 ASN 19 2.093 22.684 14.194 1.00 3.97 ATOM 136 ND2 ASN 19 1.622 21.675 16.135 1.00 5.03 ATOM 137 N TRP 20 -2.933 22.858 14.185 1.00 4.45 ATOM 138 CA TRP 20 -4.263 22.962 14.662 1.00 5.32 ATOM 139 C TRP 20 -4.800 24.114 13.779 1.00 5.39 ATOM 140 O TRP 20 -5.546 24.852 14.380 1.00 4.88 ATOM 141 CB TRP 20 -4.325 23.277 16.157 1.00 7.33 ATOM 142 CG TRP 20 -3.744 22.199 17.021 1.00 7.83 ATOM 143 CD1 TRP 20 -2.718 22.328 17.908 1.00 8.87 ATOM 144 CD2 TRP 20 -4.156 20.811 17.085 1.00 7.79 ATOM 145 NE1 TRP 20 -2.462 21.125 18.517 1.00 9.71 ATOM 146 CE2 TRP 20 -3.334 20.186 18.026 1.00 9.03 ATOM 147 CE3 TRP 20 -5.142 20.063 16.430 1.00 7.01 ATOM 148 CZ2 TRP 20 -3.462 18.839 18.332 1.00 9.59 ATOM 149 CZ3 TRP 20 -5.272 18.714 16.738 1.00 7.29 ATOM 150 N ALA 21 -4.903 23.889 12.426 1.00 6.48 ATOM 151 CA ALA 21 -4.244 24.745 11.357 1.00 8.36 ATOM 152 C ALA 21 -5.291 25.546 10.403 1.00 8.79 ATOM 153 O ALA 21 -5.538 26.658 10.868 1.00 10.09 ATOM 154 CB ALA 21 -3.364 23.870 10.466 1.00 9.03 ATOM 155 N SER 22 -6.412 24.948 9.660 1.00 8.03 ATOM 156 CA SER 22 -7.540 23.951 9.980 1.00 7.66 ATOM 157 C SER 22 -7.779 24.256 11.443 1.00 6.01 ATOM 158 O SER 22 -7.508 23.421 12.271 1.00 5.44 ATOM 159 CB SER 22 -7.120 22.503 9.749 1.00 8.98 ATOM 160 OG SER 22 -6.764 22.259 8.416 1.00 11.24 ATOM 161 N LEU 23 -8.091 25.518 11.771 1.00 5.90 ATOM 162 CA LEU 23 -8.021 25.842 13.197 1.00 5.06 ATOM 163 C LEU 23 -8.712 24.732 13.814 1.00 4.10 ATOM 164 O LEU 23 -9.908 24.561 13.530 1.00 3.36 ATOM 165 CB LEU 23 -8.699 27.170 13.555 1.00 6.30 ATOM 166 CG LEU 23 -8.075 28.426 12.932 1.00 6.91 ATOM 167 CD1 LEU 23 -8.922 29.642 13.281 1.00 8.58 ATOM 168 CD2 LEU 23 -6.649 28.589 13.438 1.00 5.96 ATOM 169 N ALA 24 -7.987 23.876 14.517 1.00 4.17 ATOM 170 CA ALA 24 -7.864 22.628 15.239 1.00 4.29 ATOM 171 C ALA 24 -7.813 21.635 14.063 1.00 4.51 ATOM 172 O ALA 24 -6.782 21.500 13.408 1.00 5.53 ATOM 173 CB ALA 24 -8.979 22.406 16.246 1.00 4.35 ATOM 174 N ALA 25 -8.908 20.925 13.785 1.00 4.80 ATOM 175 CA ALA 25 -9.190 20.539 12.410 1.00 3.87 ATOM 176 C ALA 25 -10.066 21.894 12.088 1.00 2.81 ATOM 177 O ALA 25 -9.868 22.442 11.004 1.00 2.48 ATOM 178 CB ALA 25 -9.922 19.216 12.299 1.00 3.87 ATOM 179 N ASN 26 -10.985 22.564 13.068 1.00 2.94 ATOM 180 CA ASN 26 -11.555 22.291 14.508 1.00 2.99 ATOM 181 C ASN 26 -12.767 21.235 14.387 1.00 3.16 ATOM 182 O ASN 26 -13.212 20.890 15.467 1.00 3.05 ATOM 183 CB ASN 26 -12.018 23.569 15.183 1.00 3.92 ATOM 184 CG ASN 26 -12.155 23.419 16.673 1.00 2.67 ATOM 185 OD1 ASN 26 -11.339 22.752 17.320 1.00 2.99 ATOM 186 ND2 ASN 26 -13.171 24.026 17.230 1.00 2.39 ATOM 187 N GLU 27 -13.316 20.622 13.201 1.00 4.19 ATOM 188 CA GLU 27 -13.172 20.575 11.667 1.00 3.95 ATOM 189 C GLU 27 -13.035 21.996 11.166 1.00 1.82 ATOM 190 O GLU 27 -12.466 22.257 10.131 1.00 2.61 ATOM 191 CB GLU 27 -14.391 19.835 11.072 1.00 6.13 ATOM 192 CG GLU 27 -14.426 18.328 11.279 1.00 8.00 ATOM 193 CD GLU 27 -14.996 17.837 12.593 1.00 9.98 ATOM 194 OE1 GLU 27 -15.464 18.625 13.375 1.00 10.91 ATOM 195 OE2 GLU 27 -14.979 16.646 12.794 1.00 10.83 ATOM 196 N LEU 28 -13.527 22.909 11.979 1.00 0.98 ATOM 197 CA LEU 28 -13.605 24.330 11.732 1.00 0.89 ATOM 198 C LEU 28 -14.624 24.399 10.622 1.00 1.81 ATOM 199 O LEU 28 -14.218 24.579 9.503 1.00 3.79 ATOM 200 CB LEU 28 -12.258 24.932 11.314 1.00 1.02 ATOM 201 CG LEU 28 -12.261 26.442 11.041 1.00 0.99 ATOM 202 CD1 LEU 28 -12.629 27.188 12.316 1.00 3.06 ATOM 203 CD2 LEU 28 -10.892 26.869 10.533 1.00 1.83 ATOM 204 N ARG 29 -15.763 23.699 10.801 1.00 0.62 ATOM 205 CA ARG 29 -16.787 24.068 9.789 1.00 0.80 ATOM 206 C ARG 29 -16.140 23.920 8.404 1.00 1.84 ATOM 207 O ARG 29 -16.060 24.851 7.588 1.00 2.89 ATOM 208 CB ARG 29 -17.286 25.492 9.984 1.00 1.21 ATOM 209 CG ARG 29 -17.951 25.759 11.325 1.00 0.75 ATOM 210 CD ARG 29 -18.485 27.143 11.406 1.00 1.11 ATOM 211 NE ARG 29 -17.431 28.138 11.293 1.00 0.60 ATOM 212 CZ ARG 29 -16.645 28.539 12.310 1.00 1.54 ATOM 213 N VAL 30 -15.710 22.686 8.224 1.00 1.96 ATOM 214 CA VAL 30 -15.133 21.541 7.515 1.00 1.84 ATOM 215 C VAL 30 -16.213 20.724 8.172 1.00 1.50 ATOM 216 O VAL 30 -16.690 21.099 9.252 1.00 1.26 ATOM 217 CB VAL 30 -13.694 21.143 7.888 1.00 2.11 ATOM 218 CG1 VAL 30 -13.253 19.928 7.085 1.00 2.98 ATOM 219 CG2 VAL 30 -12.755 22.316 7.652 1.00 2.60 ATOM 220 N THR 31 -16.878 19.900 7.417 1.00 1.97 ATOM 221 CA THR 31 -17.960 19.011 7.258 1.00 4.00 ATOM 222 C THR 31 -19.060 20.036 7.093 1.00 5.11 ATOM 223 O THR 31 -19.780 20.015 6.115 1.00 6.93 ATOM 224 CB THR 31 -18.202 18.101 8.480 1.00 4.66 ATOM 225 OG1 THR 31 -17.061 17.265 8.693 1.00 5.86 ATOM 226 CG2 THR 31 -19.442 17.258 8.282 1.00 7.14 ATOM 227 N GLU 32 -19.134 21.020 8.000 1.00 5.04 ATOM 228 CA GLU 32 -20.158 22.046 7.791 1.00 5.58 ATOM 229 C GLU 32 -19.890 22.580 6.414 1.00 4.64 ATOM 230 O GLU 32 -20.812 22.924 5.700 1.00 6.27 ATOM 231 CB GLU 32 -20.094 23.162 8.837 1.00 7.98 ATOM 232 CG GLU 32 -21.200 24.201 8.716 1.00 10.13 ATOM 233 CD GLU 32 -21.153 25.234 9.808 1.00 12.40 ATOM 234 OE1 GLU 32 -21.242 24.863 10.954 1.00 12.93 ATOM 235 OE2 GLU 32 -21.030 26.394 9.495 1.00 13.70 ATOM 236 N ARG 33 -18.602 22.660 6.044 1.00 3.45 ATOM 237 CA ARG 33 -18.213 23.202 4.763 1.00 2.26 ATOM 238 C ARG 33 -18.854 24.697 4.715 1.00 2.04 ATOM 239 O ARG 33 -18.087 25.566 5.123 1.00 2.67 ATOM 240 CB ARG 33 -18.708 22.289 3.675 1.00 4.06 ATOM 241 CG ARG 33 -18.022 20.974 3.652 1.00 5.69 ATOM 242 CD ARG 33 -18.652 20.077 2.690 1.00 7.68 ATOM 243 NE ARG 33 -18.002 18.781 2.673 1.00 9.20 ATOM 244 CZ ARG 33 -18.427 17.724 1.979 1.00 11.38 ATOM 245 N PRO 34 -20.146 25.116 4.231 1.00 2.78 ATOM 246 CA PRO 34 -21.385 24.572 3.493 1.00 2.75 ATOM 247 C PRO 34 -20.742 24.141 2.204 1.00 1.78 ATOM 248 O PRO 34 -20.827 22.979 1.803 1.00 2.44 ATOM 249 CB PRO 34 -22.316 25.767 3.384 1.00 3.93 ATOM 250 CG PRO 34 -21.407 26.971 3.548 1.00 4.48 ATOM 251 CD PRO 34 -20.346 26.532 4.551 1.00 4.28 ATOM 252 N PHE 35 -20.087 25.099 1.542 1.00 1.99 ATOM 253 CA PHE 35 -19.161 24.849 0.450 1.00 1.58 ATOM 254 C PHE 35 -19.523 23.579 -0.305 1.00 1.92 ATOM 255 O PHE 35 -18.690 22.683 -0.315 1.00 3.24 ATOM 256 CB PHE 35 -17.726 24.799 0.950 1.00 1.55 ATOM 257 CG PHE 35 -17.304 26.072 1.553 1.00 1.33 ATOM 258 CD1 PHE 35 -16.627 26.091 2.747 1.00 1.79 ATOM 259 CD2 PHE 35 -17.609 27.278 0.942 1.00 0.95 ATOM 260 CE1 PHE 35 -16.247 27.272 3.328 1.00 2.01 ATOM 261 CE2 PHE 35 -17.232 28.465 1.518 1.00 1.25 ATOM 262 CZ PHE 35 -16.542 28.466 2.708 1.00 1.80 ATOM 263 N TRP 36 -20.694 23.454 -1.027 1.00 1.87 ATOM 264 CA TRP 36 -22.004 23.732 -1.687 1.00 1.56 ATOM 265 C TRP 36 -21.596 24.934 -2.465 1.00 1.31 ATOM 266 O TRP 36 -22.391 25.810 -2.800 1.00 2.67 ATOM 267 CB TRP 36 -23.153 24.034 -0.723 1.00 3.59 ATOM 268 CG TRP 36 -23.437 22.919 0.238 1.00 4.38 ATOM 269 CD1 TRP 36 -23.038 21.621 0.120 1.00 6.16 ATOM 270 CD2 TRP 36 -24.189 22.999 1.472 1.00 4.07 ATOM 271 NE1 TRP 36 -23.488 20.890 1.193 1.00 7.11 ATOM 272 CE2 TRP 36 -24.193 21.717 2.031 1.00 5.68 ATOM 273 CE3 TRP 36 -24.848 24.039 2.140 1.00 3.17 ATOM 274 CZ2 TRP 36 -24.832 21.441 3.228 1.00 5.88 ATOM 275 CZ3 TRP 36 -25.488 23.761 3.342 1.00 3.11 ATOM 276 N ILE 37 -20.264 24.984 -2.642 1.00 2.27 ATOM 277 CA ILE 37 -19.441 25.998 -3.268 1.00 4.04 ATOM 278 C ILE 37 -19.597 27.403 -2.698 1.00 3.10 ATOM 279 O ILE 37 -18.662 28.194 -2.679 1.00 2.66 ATOM 280 CB ILE 37 -19.658 25.979 -4.760 1.00 6.68 ATOM 281 CG1 ILE 37 -19.335 24.615 -5.330 1.00 8.06 ATOM 282 CG2 ILE 37 -18.869 27.039 -5.411 1.00 8.37 ATOM 283 CD1 ILE 37 -17.936 24.161 -5.045 1.00 9.35 ATOM 284 N SER 38 -20.841 27.718 -2.390 1.00 3.23 ATOM 285 CA SER 38 -21.452 28.887 -1.789 1.00 3.92 ATOM 286 C SER 38 -21.500 29.997 -2.829 1.00 5.04 ATOM 287 O SER 38 -22.526 30.620 -3.060 1.00 6.86 ATOM 288 CB SER 38 -20.673 29.334 -0.566 1.00 4.39 ATOM 289 OG SER 38 -20.648 28.328 0.409 1.00 3.98 ATOM 290 N SER 39 -20.476 29.965 -3.658 1.00 4.60 ATOM 291 CA SER 39 -20.234 30.685 -4.879 1.00 3.24 ATOM 292 C SER 39 -20.732 29.593 -5.780 1.00 2.61 ATOM 293 O SER 39 -20.093 29.217 -6.761 1.00 4.06 ATOM 294 CB SER 39 -18.783 31.056 -5.113 1.00 3.10 ATOM 295 OG SER 39 -18.320 31.926 -4.117 1.00 4.16 ATOM 296 N PHE 40 -21.852 28.978 -5.308 1.00 1.90 ATOM 297 CA PHE 40 -22.457 27.840 -5.977 1.00 3.02 ATOM 298 C PHE 40 -22.300 28.396 -7.316 1.00 2.92 ATOM 299 O PHE 40 -22.604 29.580 -7.449 1.00 4.07 ATOM 300 CB PHE 40 -23.917 27.578 -5.631 1.00 3.73 ATOM 301 CG PHE 40 -24.455 26.346 -6.348 1.00 4.56 ATOM 302 CD1 PHE 40 -25.204 26.477 -7.536 1.00 4.53 ATOM 303 CD2 PHE 40 -24.202 25.053 -5.835 1.00 5.60 ATOM 304 CE1 PHE 40 -25.680 25.356 -8.196 1.00 5.45 ATOM 305 CE2 PHE 40 -24.685 23.922 -6.505 1.00 6.38 ATOM 306 CZ PHE 40 -25.420 24.082 -7.683 1.00 6.27 ATOM 307 N ILE 41 -21.794 27.631 -8.309 1.00 2.82 ATOM 308 CA ILE 41 -21.583 28.274 -9.603 1.00 3.24 ATOM 309 C ILE 41 -23.010 28.469 -10.011 1.00 3.05 ATOM 310 O ILE 41 -23.638 27.617 -10.597 1.00 4.79 ATOM 311 CB ILE 41 -20.800 27.421 -10.618 1.00 5.07 ATOM 312 CG1 ILE 41 -19.407 27.091 -10.077 1.00 6.81 ATOM 313 CG2 ILE 41 -20.699 28.143 -11.953 1.00 5.16 ATOM 314 CD1 ILE 41 -18.653 26.077 -10.907 1.00 8.76 ATOM 315 N GLY 42 -23.522 29.570 -9.498 1.00 2.45 ATOM 316 CA GLY 42 -24.854 30.135 -9.443 1.00 3.29 ATOM 317 C GLY 42 -24.416 31.539 -9.007 1.00 3.96 ATOM 318 O GLY 42 -25.295 32.389 -9.088 1.00 4.93 ATOM 319 N ARG 43 -23.168 31.804 -9.489 1.00 4.53 ATOM 320 CA ARG 43 -22.149 32.670 -8.851 1.00 3.97 ATOM 321 C ARG 43 -21.873 33.762 -9.972 1.00 1.49 ATOM 322 O ARG 43 -20.726 34.204 -9.939 1.00 1.61 ATOM 323 CB ARG 43 -20.851 31.960 -8.469 1.00 6.66 ATOM 324 CG ARG 43 -20.036 31.309 -9.586 1.00 9.02 ATOM 325 CD ARG 43 -19.019 32.172 -10.227 1.00 11.61 ATOM 326 NE ARG 43 -18.198 31.373 -11.165 1.00 12.13 ATOM 327 CZ ARG 43 -17.285 31.859 -12.042 1.00 13.64 ATOM 328 N SER 44 -22.784 34.224 -11.031 1.00 0.86 ATOM 329 CA SER 44 -24.229 33.977 -11.590 1.00 1.44 ATOM 330 C SER 44 -24.128 32.833 -12.670 1.00 2.65 ATOM 331 O SER 44 -25.004 32.847 -13.516 1.00 4.45 ATOM 332 CB SER 44 -24.816 35.228 -12.214 1.00 2.29 ATOM 333 OG SER 44 -24.990 36.234 -11.254 1.00 2.99 ATOM 334 N LYS 45 -23.805 31.624 -12.131 1.00 2.20 ATOM 335 CA LYS 45 -22.801 30.729 -12.781 1.00 2.39 ATOM 336 C LYS 45 -21.865 31.678 -13.638 1.00 2.96 ATOM 337 O LYS 45 -21.285 31.099 -14.540 1.00 3.39 ATOM 338 CB LYS 45 -23.532 29.779 -13.711 1.00 2.20 ATOM 339 CG LYS 45 -24.474 28.799 -13.117 1.00 0.88 ATOM 340 CD LYS 45 -25.213 28.006 -14.171 1.00 2.85 ATOM 341 CE LYS 45 -26.226 27.089 -13.518 1.00 2.23 ATOM 342 NZ LYS 45 -27.014 26.333 -14.521 1.00 4.62 TER END