####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS344_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 5 - 32 4.99 15.60 LCS_AVERAGE: 53.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 5 - 16 1.99 19.28 LONGEST_CONTINUOUS_SEGMENT: 12 6 - 17 1.29 19.83 LONGEST_CONTINUOUS_SEGMENT: 12 19 - 30 1.83 17.94 LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 1.77 19.26 LCS_AVERAGE: 22.31 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 6 - 15 0.93 19.69 LONGEST_CONTINUOUS_SEGMENT: 10 7 - 16 0.85 20.13 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.77 16.88 LCS_AVERAGE: 16.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 8 3 4 4 5 5 6 6 7 7 7 7 9 9 9 9 10 11 12 15 16 LCS_GDT V 3 V 3 4 5 15 3 4 4 5 5 6 6 7 7 7 7 9 9 9 9 10 11 14 22 27 LCS_GDT Q 4 Q 4 4 5 27 3 4 4 5 5 6 6 7 7 7 10 12 13 16 24 27 28 29 31 32 LCS_GDT G 5 G 5 4 12 28 3 4 4 5 5 7 11 12 16 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT P 6 P 6 10 12 28 2 4 10 12 12 13 14 16 17 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT W 7 W 7 10 12 28 2 8 10 12 12 12 14 16 17 19 22 25 25 26 27 27 28 31 32 32 LCS_GDT V 8 V 8 10 12 28 3 4 10 12 12 12 14 16 17 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT G 9 G 9 10 12 28 7 8 10 12 12 12 13 15 16 17 19 21 23 26 26 27 28 31 32 32 LCS_GDT S 10 S 10 10 12 28 7 8 10 12 12 12 13 15 17 18 22 25 25 26 27 27 29 31 32 32 LCS_GDT S 11 S 11 10 12 28 7 8 10 12 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT Y 12 Y 12 10 12 28 7 8 10 12 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT V 13 V 13 10 12 28 7 8 10 12 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT A 14 A 14 10 12 28 7 8 10 12 12 12 13 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT E 15 E 15 10 12 28 7 8 10 12 12 12 13 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT T 16 T 16 10 12 28 5 8 9 12 12 12 13 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT G 17 G 17 9 12 28 3 4 9 12 12 12 13 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT Q 18 Q 18 4 11 28 3 3 4 5 7 10 13 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT N 19 N 19 4 12 28 3 3 4 8 11 12 14 14 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT W 20 W 20 10 12 28 4 8 10 10 12 13 14 16 17 18 21 25 25 26 27 27 29 31 32 32 LCS_GDT A 21 A 21 10 12 28 5 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT S 22 S 22 10 12 28 5 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT L 23 L 23 10 12 28 5 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT A 24 A 24 10 12 28 6 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT A 25 A 25 10 12 28 6 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT N 26 N 26 10 12 28 6 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT E 27 E 27 10 12 28 6 9 10 10 12 13 14 16 17 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT L 28 L 28 10 12 28 6 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT R 29 R 29 10 12 28 6 9 10 10 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT V 30 V 30 6 12 28 4 5 6 9 11 12 14 15 18 19 22 25 25 26 27 27 29 31 32 32 LCS_GDT T 31 T 31 6 12 28 4 5 6 9 11 12 14 14 15 19 20 22 23 26 27 27 29 31 32 32 LCS_GDT E 32 E 32 6 10 28 4 5 6 9 11 12 14 14 15 19 20 20 22 24 27 27 29 31 32 32 LCS_GDT R 33 R 33 6 10 24 3 5 6 7 10 10 13 14 15 15 18 20 21 23 24 27 29 31 32 32 LCS_GDT P 34 P 34 4 8 24 3 4 5 5 7 8 9 13 14 14 16 19 20 23 24 27 28 31 32 32 LCS_GDT F 35 F 35 4 6 21 3 4 5 5 6 6 6 8 11 11 16 19 20 22 24 27 29 31 32 32 LCS_GDT W 36 W 36 4 6 19 3 4 5 5 6 6 6 9 11 11 11 13 20 21 23 27 29 31 32 32 LCS_GDT I 37 I 37 4 6 13 3 4 5 5 6 6 6 9 11 11 11 12 12 13 13 13 17 21 23 29 LCS_GDT S 38 S 38 3 6 13 1 3 5 5 6 6 6 9 11 11 11 12 12 13 13 13 13 17 19 26 LCS_GDT S 39 S 39 5 6 13 0 4 5 5 5 5 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT F 40 F 40 5 6 13 3 4 5 5 5 6 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT I 41 I 41 5 6 13 3 4 5 5 5 6 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT G 42 G 42 5 6 13 3 4 5 5 5 6 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT R 43 R 43 5 6 13 3 4 5 5 5 6 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT S 44 S 44 4 6 13 3 4 4 5 5 6 6 9 11 11 11 12 12 13 13 13 13 14 15 16 LCS_GDT K 45 K 45 4 6 13 3 4 4 5 5 6 6 7 7 7 7 9 11 13 13 13 13 14 15 16 LCS_AVERAGE LCS_A: 30.82 ( 16.48 22.31 53.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 12 12 13 14 16 18 19 22 25 25 26 27 27 29 31 32 32 GDT PERCENT_AT 15.91 20.45 22.73 27.27 27.27 29.55 31.82 36.36 40.91 43.18 50.00 56.82 56.82 59.09 61.36 61.36 65.91 70.45 72.73 72.73 GDT RMS_LOCAL 0.30 0.65 0.77 1.29 1.29 1.81 2.18 2.51 3.53 3.46 3.81 4.17 4.17 4.35 4.83 4.65 5.86 6.05 6.24 6.24 GDT RMS_ALL_AT 20.63 17.08 16.88 19.83 19.83 15.44 20.05 16.09 15.30 16.22 16.00 16.07 16.07 16.25 15.44 15.86 15.15 15.28 15.40 15.40 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 23.411 0 0.080 0.141 25.355 0.000 0.000 - LGA V 3 V 3 18.628 0 0.058 0.105 21.779 0.000 0.000 16.799 LGA Q 4 Q 4 11.448 0 0.084 0.142 14.104 0.000 0.000 11.832 LGA G 5 G 5 5.737 0 0.358 0.358 7.844 3.182 3.182 - LGA P 6 P 6 1.824 0 0.494 0.490 4.699 29.545 19.481 4.552 LGA W 7 W 7 3.409 0 0.319 1.217 4.091 25.455 18.182 3.181 LGA V 8 V 8 3.596 0 0.689 0.882 6.608 14.545 8.312 6.087 LGA G 9 G 9 5.825 0 0.041 0.041 5.825 5.909 5.909 - LGA S 10 S 10 5.870 0 0.073 0.088 8.096 0.455 0.303 7.297 LGA S 11 S 11 4.101 0 0.040 0.072 6.464 7.273 5.758 6.464 LGA Y 12 Y 12 3.267 0 0.063 1.170 10.969 26.364 9.242 10.969 LGA V 13 V 13 3.193 0 0.019 0.188 7.360 17.273 9.870 7.360 LGA A 14 A 14 9.351 0 0.039 0.051 12.017 0.000 0.000 - LGA E 15 E 15 10.919 0 0.049 0.828 14.078 0.000 0.000 14.078 LGA T 16 T 16 9.106 0 0.117 0.303 10.083 0.000 0.000 5.165 LGA G 17 G 17 9.424 0 0.661 0.661 9.424 0.000 0.000 - LGA Q 18 Q 18 8.221 0 0.596 1.266 13.224 0.000 0.000 12.315 LGA N 19 N 19 6.240 0 0.062 0.290 11.031 0.455 0.227 8.024 LGA W 20 W 20 2.682 0 0.632 0.540 12.262 38.636 12.338 12.262 LGA A 21 A 21 1.761 0 0.093 0.090 2.430 55.000 51.636 - LGA S 22 S 22 0.888 0 0.017 0.668 1.877 86.818 80.000 1.877 LGA L 23 L 23 0.962 0 0.113 1.391 4.754 73.636 48.864 4.754 LGA A 24 A 24 1.568 0 0.035 0.043 2.705 70.000 61.455 - LGA A 25 A 25 1.798 0 0.047 0.057 2.801 54.545 49.091 - LGA N 26 N 26 2.308 0 0.000 0.643 4.392 38.636 29.091 2.913 LGA E 27 E 27 1.903 0 0.035 0.331 4.947 62.273 32.525 4.947 LGA L 28 L 28 0.929 0 0.268 1.391 3.227 74.545 60.682 3.227 LGA R 29 R 29 2.761 0 0.100 1.402 8.481 25.000 19.835 8.481 LGA V 30 V 30 6.247 0 0.029 0.064 9.185 0.455 0.260 9.185 LGA T 31 T 31 10.594 0 0.616 1.001 13.079 0.000 0.000 9.702 LGA E 32 E 32 13.758 0 0.044 0.975 14.824 0.000 0.000 13.981 LGA R 33 R 33 17.093 0 0.057 1.231 18.850 0.000 0.000 14.440 LGA P 34 P 34 19.059 0 0.085 0.393 21.891 0.000 0.000 21.891 LGA F 35 F 35 16.842 0 0.065 1.297 17.301 0.000 0.000 14.455 LGA W 36 W 36 16.688 0 0.059 1.185 22.768 0.000 0.000 22.766 LGA I 37 I 37 18.184 0 0.635 1.321 18.908 0.000 0.000 17.712 LGA S 38 S 38 18.857 0 0.672 0.839 20.908 0.000 0.000 19.775 LGA S 39 S 39 25.195 0 0.728 0.864 28.326 0.000 0.000 28.326 LGA F 40 F 40 29.982 0 0.249 0.600 32.472 0.000 0.000 31.054 LGA I 41 I 41 30.201 0 0.111 0.255 31.687 0.000 0.000 25.619 LGA G 42 G 42 34.815 0 0.035 0.035 37.037 0.000 0.000 - LGA R 43 R 43 35.302 0 0.038 1.293 40.034 0.000 0.000 40.034 LGA S 44 S 44 35.725 0 0.044 0.659 36.774 0.000 0.000 34.824 LGA K 45 K 45 35.388 0 0.104 0.644 38.073 0.000 0.000 38.073 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.494 12.482 13.306 16.136 11.960 3.429 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.51 36.364 33.499 0.613 LGA_LOCAL RMSD: 2.509 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.089 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.494 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.650680 * X + -0.318122 * Y + 0.689502 * Z + -175.326294 Y_new = -0.445576 * X + -0.895213 * Y + 0.007456 * Z + 315.929718 Z_new = 0.614880 * X + -0.312077 * Y + -0.724245 * Z + 184.583405 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.600442 -0.662233 -2.734735 [DEG: -34.4028 -37.9432 -156.6888 ] ZXZ: 1.581609 2.380735 2.040459 [DEG: 90.6195 136.4061 116.9097 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS344_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.51 33.499 12.49 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS344_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 525 N ALA 2 14.759 46.176 -8.913 1.00 1.85 N ATOM 526 CA ALA 2 14.628 45.324 -7.785 1.00 2.28 C ATOM 527 C ALA 2 13.188 45.120 -7.374 1.00 2.00 C ATOM 528 O ALA 2 12.451 46.101 -7.370 1.00 1.70 O ATOM 529 CB ALA 2 15.359 45.967 -6.602 1.00 2.06 C ATOM 530 N VAL 3 12.791 43.842 -7.131 1.00 1.85 N ATOM 531 CA VAL 3 11.573 43.606 -6.419 1.00 2.28 C ATOM 532 C VAL 3 11.935 42.691 -5.338 1.00 2.00 C ATOM 533 O VAL 3 12.475 41.598 -5.512 1.00 1.70 O ATOM 534 CB VAL 3 10.506 42.883 -7.255 1.00 2.28 C ATOM 535 CG1 VAL 3 9.254 42.597 -6.425 1.00 2.06 C ATOM 536 CG2 VAL 3 10.155 43.682 -8.517 1.00 2.06 C ATOM 537 N GLN 4 11.638 43.082 -4.109 1.00 1.85 N ATOM 538 CA GLN 4 11.691 42.170 -3.007 1.00 2.28 C ATOM 539 C GLN 4 10.324 42.243 -2.381 1.00 2.00 C ATOM 540 O GLN 4 9.805 43.338 -2.065 1.00 1.70 O ATOM 541 CB GLN 4 12.818 42.615 -1.998 1.00 2.17 C ATOM 542 CG GLN 4 14.242 42.517 -2.594 1.00 2.17 C ATOM 543 CD GLN 4 15.263 42.966 -1.545 1.00 2.00 C ATOM 544 OE1 GLN 4 14.972 43.840 -0.719 1.00 1.70 O ATOM 545 NE2 GLN 4 16.510 42.493 -1.630 1.00 1.85 N ATOM 546 N GLY 5 9.700 41.107 -2.192 1.00 1.85 N ATOM 547 CA GLY 5 8.520 40.954 -1.358 1.00 2.17 C ATOM 548 C GLY 5 8.768 39.925 -0.368 1.00 2.00 C ATOM 549 O GLY 5 8.351 38.777 -0.547 1.00 1.70 O ATOM 550 N PRO 6 9.430 40.199 0.747 1.00 1.85 N ATOM 551 CA PRO 6 10.095 39.127 1.461 1.00 2.28 C ATOM 552 C PRO 6 9.294 38.846 2.724 1.00 2.00 C ATOM 553 O PRO 6 9.569 39.362 3.822 1.00 1.70 O ATOM 554 CB PRO 6 11.525 39.639 1.715 1.00 2.17 C ATOM 555 CG PRO 6 11.304 41.157 1.906 1.00 2.17 C ATOM 556 CD PRO 6 10.074 41.494 1.082 1.00 2.17 C ATOM 557 N TRP 7 8.293 38.012 2.554 1.00 1.85 N ATOM 558 CA TRP 7 7.390 37.504 3.597 1.00 2.28 C ATOM 559 C TRP 7 8.058 36.704 4.733 1.00 2.00 C ATOM 560 O TRP 7 8.967 35.863 4.594 1.00 1.70 O ATOM 561 CB TRP 7 6.300 36.596 2.980 1.00 2.17 C ATOM 562 CG TRP 7 6.858 35.481 2.091 1.00 1.99 C ATOM 563 CD1 TRP 7 7.340 34.236 2.402 1.00 1.99 C ATOM 564 CD2 TRP 7 6.886 35.553 0.633 1.00 1.80 C ATOM 565 NE1 TRP 7 7.707 33.558 1.248 1.00 1.85 N ATOM 566 CE2 TRP 7 7.513 34.401 0.189 1.00 1.80 C ATOM 567 CE3 TRP 7 6.528 36.584 -0.236 1.00 1.99 C ATOM 568 CZ2 TRP 7 7.844 34.237 -1.148 1.00 1.99 C ATOM 569 CZ3 TRP 7 6.858 36.399 -1.591 1.00 1.99 C ATOM 570 CH2 TRP 7 7.515 35.247 -2.066 1.00 1.99 C ATOM 571 N VAL 8 7.564 36.901 5.947 1.00 1.85 N ATOM 572 CA VAL 8 7.894 36.056 7.057 1.00 2.28 C ATOM 573 C VAL 8 6.652 35.945 7.919 1.00 2.00 C ATOM 574 O VAL 8 5.862 36.913 7.916 1.00 1.70 O ATOM 575 CB VAL 8 9.114 36.516 7.852 1.00 2.28 C ATOM 576 CG1 VAL 8 8.973 37.907 8.476 1.00 2.06 C ATOM 577 CG2 VAL 8 9.556 35.433 8.865 1.00 2.06 C ATOM 578 N GLY 9 6.426 34.795 8.576 1.00 1.85 N ATOM 579 CA GLY 9 5.258 34.625 9.466 1.00 2.17 C ATOM 580 C GLY 9 4.088 34.189 8.656 1.00 2.00 C ATOM 581 O GLY 9 3.610 33.097 8.887 1.00 1.70 O ATOM 582 N SER 10 3.612 35.014 7.698 1.00 1.85 N ATOM 583 CA SER 10 2.505 34.766 6.840 1.00 2.28 C ATOM 584 C SER 10 2.620 33.521 6.000 1.00 2.00 C ATOM 585 O SER 10 1.656 32.808 5.810 1.00 1.70 O ATOM 586 CB SER 10 2.294 36.024 5.951 1.00 2.17 C ATOM 587 OG SER 10 3.469 36.331 5.155 1.00 1.77 O ATOM 588 N SER 11 3.812 33.178 5.535 1.00 1.85 N ATOM 589 CA SER 11 3.992 31.826 4.940 1.00 2.28 C ATOM 590 C SER 11 3.841 30.659 5.922 1.00 2.00 C ATOM 591 O SER 11 3.086 29.713 5.711 1.00 1.70 O ATOM 592 CB SER 11 5.409 31.766 4.280 1.00 2.17 C ATOM 593 OG SER 11 5.658 30.527 3.616 1.00 1.77 O ATOM 594 N TYR 12 4.462 30.771 7.117 1.00 1.85 N ATOM 595 CA TYR 12 4.284 29.835 8.169 1.00 2.28 C ATOM 596 C TYR 12 2.844 29.683 8.626 1.00 2.00 C ATOM 597 O TYR 12 2.336 28.557 8.811 1.00 1.70 O ATOM 598 CB TYR 12 5.182 30.162 9.386 1.00 2.17 C ATOM 599 CG TYR 12 5.088 29.095 10.475 1.00 1.99 C ATOM 600 CD1 TYR 12 5.585 27.791 10.238 1.00 1.99 C ATOM 601 CD2 TYR 12 4.465 29.306 11.719 1.00 1.99 C ATOM 602 CE1 TYR 12 5.451 26.747 11.144 1.00 1.99 C ATOM 603 CE2 TYR 12 4.373 28.255 12.656 1.00 1.99 C ATOM 604 CZ TYR 12 4.871 26.984 12.396 1.00 1.99 C ATOM 605 OH TYR 12 4.710 25.944 13.366 1.00 1.77 O ATOM 606 N VAL 13 2.176 30.790 8.848 1.00 1.85 N ATOM 607 CA VAL 13 0.799 30.934 9.218 1.00 2.28 C ATOM 608 C VAL 13 -0.196 30.453 8.142 1.00 2.00 C ATOM 609 O VAL 13 -1.144 29.724 8.439 1.00 1.70 O ATOM 610 CB VAL 13 0.716 32.438 9.524 1.00 2.28 C ATOM 611 CG1 VAL 13 -0.697 33.058 9.588 1.00 2.06 C ATOM 612 CG2 VAL 13 1.364 32.697 10.918 1.00 2.06 C ATOM 613 N ALA 14 0.026 30.794 6.850 1.00 1.85 N ATOM 614 CA ALA 14 -0.757 30.340 5.725 1.00 2.28 C ATOM 615 C ALA 14 -0.668 28.861 5.446 1.00 2.00 C ATOM 616 O ALA 14 -1.666 28.244 5.099 1.00 1.70 O ATOM 617 CB ALA 14 -0.420 31.131 4.422 1.00 2.06 C ATOM 618 N GLU 15 0.527 28.269 5.594 1.00 1.85 N ATOM 619 CA GLU 15 0.854 26.859 5.323 1.00 2.28 C ATOM 620 C GLU 15 0.144 25.874 6.199 1.00 2.00 C ATOM 621 O GLU 15 -0.368 24.841 5.776 1.00 1.70 O ATOM 622 CB GLU 15 2.384 26.689 5.479 1.00 2.17 C ATOM 623 CG GLU 15 2.818 25.257 5.166 1.00 2.17 C ATOM 624 CD GLU 15 4.345 25.142 5.219 1.00 2.00 C ATOM 625 OE1 GLU 15 5.049 25.782 4.390 1.00 1.70 O ATOM 626 OE2 GLU 15 4.848 24.344 6.059 1.00 1.70 O ATOM 627 N THR 16 0.095 26.166 7.503 1.00 1.85 N ATOM 628 CA THR 16 -0.576 25.359 8.511 1.00 2.28 C ATOM 629 C THR 16 -2.115 25.262 8.346 1.00 2.00 C ATOM 630 O THR 16 -2.687 24.185 8.542 1.00 1.70 O ATOM 631 CB THR 16 -0.166 25.828 9.927 1.00 2.28 C ATOM 632 OG1 THR 16 -0.220 27.234 10.007 1.00 1.77 O ATOM 633 CG2 THR 16 1.246 25.452 10.333 1.00 2.06 C ATOM 634 N GLY 17 -2.781 26.339 7.899 1.00 1.85 N ATOM 635 CA GLY 17 -4.187 26.276 7.612 1.00 2.17 C ATOM 636 C GLY 17 -4.953 27.578 7.882 1.00 2.00 C ATOM 637 O GLY 17 -4.475 28.518 8.521 1.00 1.70 O ATOM 638 N GLN 18 -6.192 27.688 7.390 1.00 1.85 N ATOM 639 CA GLN 18 -6.919 28.919 7.419 1.00 2.28 C ATOM 640 C GLN 18 -7.282 29.390 8.846 1.00 2.00 C ATOM 641 O GLN 18 -7.107 30.513 9.273 1.00 1.70 O ATOM 642 CB GLN 18 -8.210 28.882 6.541 1.00 2.17 C ATOM 643 CG GLN 18 -8.515 30.204 5.838 1.00 2.17 C ATOM 644 CD GLN 18 -7.572 30.504 4.701 1.00 2.00 C ATOM 645 OE1 GLN 18 -7.679 29.950 3.602 1.00 1.70 O ATOM 646 NE2 GLN 18 -6.572 31.403 4.925 1.00 1.85 N ATOM 647 N ASN 19 -7.734 28.412 9.655 1.00 1.85 N ATOM 648 CA ASN 19 -7.919 28.539 11.099 1.00 2.28 C ATOM 649 C ASN 19 -6.667 28.917 11.848 1.00 2.00 C ATOM 650 O ASN 19 -6.708 29.770 12.722 1.00 1.70 O ATOM 651 CB ASN 19 -8.404 27.209 11.764 1.00 2.17 C ATOM 652 CG ASN 19 -9.702 26.711 11.097 1.00 2.00 C ATOM 653 OD1 ASN 19 -9.680 26.283 9.939 1.00 1.70 O ATOM 654 ND2 ASN 19 -10.791 26.630 11.917 1.00 1.85 N ATOM 655 N TRP 20 -5.539 28.376 11.401 1.00 1.85 N ATOM 656 CA TRP 20 -4.233 28.797 11.924 1.00 2.28 C ATOM 657 C TRP 20 -3.852 30.228 11.637 1.00 2.00 C ATOM 658 O TRP 20 -3.260 30.893 12.480 1.00 1.70 O ATOM 659 CB TRP 20 -3.087 27.787 11.594 1.00 2.17 C ATOM 660 CG TRP 20 -3.297 26.414 12.182 1.00 1.99 C ATOM 661 CD1 TRP 20 -3.906 25.290 11.702 1.00 1.99 C ATOM 662 CD2 TRP 20 -2.879 26.133 13.516 1.00 1.80 C ATOM 663 NE1 TRP 20 -3.979 24.302 12.695 1.00 1.85 N ATOM 664 CE2 TRP 20 -3.336 24.792 13.784 1.00 1.80 C ATOM 665 CE3 TRP 20 -2.182 26.893 14.470 1.00 1.99 C ATOM 666 CZ2 TRP 20 -3.024 24.191 15.017 1.00 1.99 C ATOM 667 CZ3 TRP 20 -1.946 26.272 15.683 1.00 1.99 C ATOM 668 CH2 TRP 20 -2.381 24.993 15.977 1.00 1.99 C ATOM 669 N ALA 21 -4.183 30.792 10.455 1.00 1.85 N ATOM 670 CA ALA 21 -3.916 32.124 10.130 1.00 2.28 C ATOM 671 C ALA 21 -4.425 33.167 11.080 1.00 2.00 C ATOM 672 O ALA 21 -3.660 34.033 11.461 1.00 1.70 O ATOM 673 CB ALA 21 -4.450 32.419 8.724 1.00 2.06 C ATOM 674 N SER 22 -5.700 33.061 11.520 1.00 1.85 N ATOM 675 CA SER 22 -6.285 33.998 12.446 1.00 2.28 C ATOM 676 C SER 22 -5.712 33.866 13.796 1.00 2.00 C ATOM 677 O SER 22 -5.412 34.851 14.458 1.00 1.70 O ATOM 678 CB SER 22 -7.814 33.829 12.557 1.00 2.17 C ATOM 679 OG SER 22 -8.504 34.961 13.103 1.00 1.77 O ATOM 680 N LEU 23 -5.520 32.623 14.289 1.00 1.85 N ATOM 681 CA LEU 23 -5.101 32.382 15.643 1.00 2.28 C ATOM 682 C LEU 23 -3.625 32.737 15.746 1.00 2.00 C ATOM 683 O LEU 23 -3.206 33.501 16.593 1.00 1.70 O ATOM 684 CB LEU 23 -5.284 30.867 15.937 1.00 2.17 C ATOM 685 CG LEU 23 -4.521 30.227 17.154 1.00 2.28 C ATOM 686 CD1 LEU 23 -4.905 30.846 18.488 1.00 2.06 C ATOM 687 CD2 LEU 23 -4.759 28.713 17.168 1.00 2.06 C ATOM 688 N ALA 24 -2.740 32.184 14.894 1.00 1.85 N ATOM 689 CA ALA 24 -1.325 32.290 15.011 1.00 2.28 C ATOM 690 C ALA 24 -0.868 33.652 14.645 1.00 2.00 C ATOM 691 O ALA 24 0.051 34.153 15.281 1.00 1.70 O ATOM 692 CB ALA 24 -0.592 31.240 14.181 1.00 2.06 C ATOM 693 N ALA 25 -1.482 34.335 13.613 1.00 1.85 N ATOM 694 CA ALA 25 -1.055 35.699 13.346 1.00 2.28 C ATOM 695 C ALA 25 -1.387 36.628 14.451 1.00 2.00 C ATOM 696 O ALA 25 -0.588 37.513 14.773 1.00 1.70 O ATOM 697 CB ALA 25 -1.668 36.202 12.081 1.00 2.06 C ATOM 698 N ASN 26 -2.558 36.461 15.092 1.00 1.85 N ATOM 699 CA ASN 26 -2.865 37.207 16.291 1.00 2.28 C ATOM 700 C ASN 26 -1.961 36.915 17.481 1.00 2.00 C ATOM 701 O ASN 26 -1.475 37.773 18.163 1.00 1.70 O ATOM 702 CB ASN 26 -4.336 36.993 16.745 1.00 2.17 C ATOM 703 CG ASN 26 -5.252 37.944 16.055 1.00 2.00 C ATOM 704 OD1 ASN 26 -5.488 39.084 16.456 1.00 1.70 O ATOM 705 ND2 ASN 26 -5.899 37.499 14.943 1.00 1.85 N ATOM 706 N GLU 27 -1.666 35.647 17.743 1.00 1.85 N ATOM 707 CA GLU 27 -0.743 35.256 18.783 1.00 2.28 C ATOM 708 C GLU 27 0.738 35.538 18.520 1.00 2.00 C ATOM 709 O GLU 27 1.537 35.635 19.446 1.00 1.70 O ATOM 710 CB GLU 27 -1.021 33.770 19.085 1.00 2.17 C ATOM 711 CG GLU 27 -2.309 33.522 19.939 1.00 2.17 C ATOM 712 CD GLU 27 -2.244 34.084 21.331 1.00 2.00 C ATOM 713 OE1 GLU 27 -1.125 34.263 21.872 1.00 1.70 O ATOM 714 OE2 GLU 27 -3.275 34.444 21.933 1.00 1.70 O ATOM 715 N LEU 28 1.126 35.755 17.228 1.00 1.85 N ATOM 716 CA LEU 28 2.404 36.267 16.824 1.00 2.28 C ATOM 717 C LEU 28 2.668 37.643 17.377 1.00 2.00 C ATOM 718 O LEU 28 3.694 37.994 17.952 1.00 1.70 O ATOM 719 CB LEU 28 2.548 36.228 15.305 1.00 2.17 C ATOM 720 CG LEU 28 3.970 36.491 14.725 1.00 2.28 C ATOM 721 CD1 LEU 28 5.022 35.582 15.421 1.00 2.06 C ATOM 722 CD2 LEU 28 3.963 36.308 13.204 1.00 2.06 C ATOM 723 N ARG 29 1.609 38.513 17.201 1.00 1.85 N ATOM 724 CA ARG 29 1.634 39.909 17.605 1.00 2.28 C ATOM 725 C ARG 29 2.829 40.714 17.062 1.00 2.00 C ATOM 726 O ARG 29 3.094 41.815 17.505 1.00 1.70 O ATOM 727 CB ARG 29 1.601 40.060 19.148 1.00 2.17 C ATOM 728 CG ARG 29 0.400 39.369 19.867 1.00 2.17 C ATOM 729 CD ARG 29 0.346 39.536 21.395 1.00 2.17 C ATOM 730 NE ARG 29 -0.985 38.943 21.837 1.00 1.85 N ATOM 731 CZ ARG 29 -1.260 37.678 22.001 1.00 2.00 C ATOM 732 NH1 ARG 29 -0.307 36.762 22.189 1.00 1.85 N ATOM 733 NH2 ARG 29 -2.516 37.297 22.087 1.00 1.85 N ATOM 734 N VAL 30 3.538 40.163 16.070 1.00 1.85 N ATOM 735 CA VAL 30 4.659 40.744 15.417 1.00 2.28 C ATOM 736 C VAL 30 4.349 40.801 13.989 1.00 2.00 C ATOM 737 O VAL 30 4.238 39.775 13.337 1.00 1.70 O ATOM 738 CB VAL 30 5.985 40.078 15.679 1.00 2.28 C ATOM 739 CG1 VAL 30 7.178 40.767 14.947 1.00 2.06 C ATOM 740 CG2 VAL 30 6.396 40.137 17.200 1.00 2.06 C ATOM 741 N THR 31 4.157 41.999 13.447 1.00 1.85 N ATOM 742 CA THR 31 3.852 42.161 12.071 1.00 2.28 C ATOM 743 C THR 31 4.863 43.112 11.574 1.00 2.00 C ATOM 744 O THR 31 4.893 44.293 11.904 1.00 1.70 O ATOM 745 CB THR 31 2.426 42.685 11.771 1.00 2.28 C ATOM 746 OG1 THR 31 1.457 41.704 12.146 1.00 1.77 O ATOM 747 CG2 THR 31 2.247 43.023 10.256 1.00 2.06 C ATOM 748 N GLU 32 5.811 42.595 10.743 1.00 1.85 N ATOM 749 CA GLU 32 6.641 43.463 9.993 1.00 2.28 C ATOM 750 C GLU 32 6.679 42.992 8.570 1.00 2.00 C ATOM 751 O GLU 32 6.926 41.849 8.250 1.00 1.70 O ATOM 752 CB GLU 32 8.108 43.548 10.517 1.00 2.17 C ATOM 753 CG GLU 32 8.980 44.691 9.886 1.00 2.17 C ATOM 754 CD GLU 32 10.233 45.012 10.663 1.00 2.00 C ATOM 755 OE1 GLU 32 11.128 44.173 10.727 1.00 1.70 O ATOM 756 OE2 GLU 32 10.237 46.089 11.323 1.00 1.70 O ATOM 757 N ARG 33 6.383 43.894 7.638 1.00 1.85 N ATOM 758 CA ARG 33 6.433 43.586 6.240 1.00 2.28 C ATOM 759 C ARG 33 7.148 44.732 5.559 1.00 2.00 C ATOM 760 O ARG 33 6.619 45.854 5.572 1.00 1.70 O ATOM 761 CB ARG 33 4.991 43.457 5.584 1.00 2.17 C ATOM 762 CG ARG 33 4.281 42.105 5.650 1.00 2.17 C ATOM 763 CD ARG 33 2.826 42.208 5.148 1.00 2.17 C ATOM 764 NE ARG 33 2.247 40.840 5.204 1.00 1.85 N ATOM 765 CZ ARG 33 1.937 40.101 4.099 1.00 2.00 C ATOM 766 NH1 ARG 33 2.046 40.514 2.863 1.00 1.85 N ATOM 767 NH2 ARG 33 1.349 38.908 4.261 1.00 1.85 N ATOM 768 N PRO 34 8.246 44.466 4.885 1.00 1.85 N ATOM 769 CA PRO 34 8.721 45.380 3.860 1.00 2.28 C ATOM 770 C PRO 34 8.143 44.843 2.545 1.00 2.00 C ATOM 771 O PRO 34 7.889 43.644 2.426 1.00 1.70 O ATOM 772 CB PRO 34 10.259 45.268 3.962 1.00 2.17 C ATOM 773 CG PRO 34 10.521 43.887 4.521 1.00 2.17 C ATOM 774 CD PRO 34 9.267 43.543 5.376 1.00 2.17 C ATOM 775 N PHE 35 8.056 45.734 1.535 1.00 1.85 N ATOM 776 CA PHE 35 8.073 45.505 0.135 1.00 2.28 C ATOM 777 C PHE 35 8.919 46.605 -0.400 1.00 2.00 C ATOM 778 O PHE 35 8.864 47.740 0.086 1.00 1.70 O ATOM 779 CB PHE 35 6.648 45.493 -0.484 1.00 2.17 C ATOM 780 CG PHE 35 6.004 44.138 -0.194 1.00 1.99 C ATOM 781 CD1 PHE 35 5.302 43.981 1.016 1.00 1.99 C ATOM 782 CD2 PHE 35 6.022 43.114 -1.151 1.00 1.99 C ATOM 783 CE1 PHE 35 4.740 42.729 1.335 1.00 1.99 C ATOM 784 CE2 PHE 35 5.453 41.856 -0.837 1.00 1.99 C ATOM 785 CZ PHE 35 4.807 41.665 0.380 1.00 1.99 C ATOM 786 N TRP 36 9.685 46.314 -1.472 1.00 1.85 N ATOM 787 CA TRP 36 10.456 47.318 -2.199 1.00 2.28 C ATOM 788 C TRP 36 10.397 46.932 -3.661 1.00 2.00 C ATOM 789 O TRP 36 10.717 45.830 -4.045 1.00 1.70 O ATOM 790 CB TRP 36 11.911 47.345 -1.660 1.00 2.17 C ATOM 791 CG TRP 36 12.912 48.257 -2.324 1.00 1.99 C ATOM 792 CD1 TRP 36 12.781 49.582 -2.703 1.00 1.99 C ATOM 793 CD2 TRP 36 14.204 47.837 -2.727 1.00 1.80 C ATOM 794 NE1 TRP 36 13.931 50.021 -3.329 1.00 1.85 N ATOM 795 CE2 TRP 36 14.785 48.904 -3.421 1.00 1.80 C ATOM 796 CE3 TRP 36 14.830 46.573 -2.707 1.00 1.99 C ATOM 797 CZ2 TRP 36 16.055 48.772 -3.995 1.00 1.99 C ATOM 798 CZ3 TRP 36 16.077 46.424 -3.292 1.00 1.99 C ATOM 799 CH2 TRP 36 16.701 47.518 -3.888 1.00 1.99 C ATOM 800 N ILE 37 9.973 47.855 -4.517 1.00 1.85 N ATOM 801 CA ILE 37 9.977 47.697 -5.953 1.00 2.28 C ATOM 802 C ILE 37 10.547 48.959 -6.565 1.00 2.00 C ATOM 803 O ILE 37 10.144 50.098 -6.280 1.00 1.70 O ATOM 804 CB ILE 37 8.581 47.461 -6.440 1.00 2.28 C ATOM 805 CG1 ILE 37 8.021 46.126 -5.889 1.00 2.17 C ATOM 806 CG2 ILE 37 8.473 47.566 -7.947 1.00 2.06 C ATOM 807 CD1 ILE 37 6.603 45.759 -6.344 1.00 2.06 C ATOM 808 N SER 38 11.602 48.818 -7.376 1.00 1.85 N ATOM 809 CA SER 38 12.227 49.959 -7.992 1.00 2.28 C ATOM 810 C SER 38 12.542 49.598 -9.438 1.00 2.00 C ATOM 811 O SER 38 12.990 48.477 -9.771 1.00 1.70 O ATOM 812 CB SER 38 13.510 50.483 -7.273 1.00 2.17 C ATOM 813 OG SER 38 14.013 51.712 -7.802 1.00 1.77 O ATOM 814 N SER 39 12.268 50.508 -10.362 1.00 1.85 N ATOM 815 CA SER 39 12.698 50.237 -11.723 1.00 2.28 C ATOM 816 C SER 39 12.696 51.515 -12.501 1.00 2.00 C ATOM 817 O SER 39 11.978 52.459 -12.090 1.00 1.70 O ATOM 818 CB SER 39 11.759 49.281 -12.546 1.00 2.17 C ATOM 819 OG SER 39 12.429 48.693 -13.652 1.00 1.77 O ATOM 820 N PHE 40 13.489 51.577 -13.591 1.00 1.85 N ATOM 821 CA PHE 40 13.824 52.870 -14.122 1.00 2.28 C ATOM 822 C PHE 40 13.845 52.930 -15.676 1.00 2.00 C ATOM 823 O PHE 40 14.445 53.828 -16.267 1.00 1.70 O ATOM 824 CB PHE 40 15.178 53.403 -13.616 1.00 2.17 C ATOM 825 CG PHE 40 15.081 53.703 -12.144 1.00 1.99 C ATOM 826 CD1 PHE 40 15.916 53.051 -11.201 1.00 1.99 C ATOM 827 CD2 PHE 40 14.187 54.670 -11.734 1.00 1.99 C ATOM 828 CE1 PHE 40 15.834 53.407 -9.832 1.00 1.99 C ATOM 829 CE2 PHE 40 14.107 55.036 -10.374 1.00 1.99 C ATOM 830 CZ PHE 40 14.932 54.397 -9.409 1.00 1.99 C ATOM 831 N ILE 41 13.203 51.987 -16.388 1.00 1.85 N ATOM 832 CA ILE 41 13.373 51.956 -17.843 1.00 2.28 C ATOM 833 C ILE 41 12.326 52.687 -18.608 1.00 2.00 C ATOM 834 O ILE 41 11.191 52.195 -18.735 1.00 1.70 O ATOM 835 CB ILE 41 13.422 50.501 -18.375 1.00 2.28 C ATOM 836 CG1 ILE 41 14.306 49.600 -17.530 1.00 2.17 C ATOM 837 CG2 ILE 41 13.898 50.498 -19.837 1.00 2.06 C ATOM 838 CD1 ILE 41 14.112 48.110 -17.840 1.00 2.06 C ATOM 839 N GLY 42 12.587 53.923 -19.062 1.00 1.85 N ATOM 840 CA GLY 42 11.631 54.725 -19.831 1.00 2.17 C ATOM 841 C GLY 42 10.537 55.261 -18.953 1.00 2.00 C ATOM 842 O GLY 42 9.591 55.897 -19.384 1.00 1.70 O ATOM 843 N ARG 43 10.650 55.003 -17.655 1.00 1.85 N ATOM 844 CA ARG 43 9.655 55.286 -16.705 1.00 2.28 C ATOM 845 C ARG 43 10.213 55.325 -15.333 1.00 2.00 C ATOM 846 O ARG 43 11.339 54.914 -15.037 1.00 1.70 O ATOM 847 CB ARG 43 8.450 54.337 -16.803 1.00 2.17 C ATOM 848 CG ARG 43 8.632 52.890 -16.269 1.00 2.17 C ATOM 849 CD ARG 43 7.324 52.095 -16.346 1.00 2.17 C ATOM 850 NE ARG 43 7.098 51.735 -17.780 1.00 1.85 N ATOM 851 CZ ARG 43 6.063 52.214 -18.494 1.00 2.00 C ATOM 852 NH1 ARG 43 4.912 52.645 -17.985 1.00 1.85 N ATOM 853 NH2 ARG 43 6.112 52.188 -19.833 1.00 1.85 N ATOM 854 N SER 44 9.418 55.898 -14.410 1.00 1.85 N ATOM 855 CA SER 44 9.846 56.060 -13.052 1.00 2.28 C ATOM 856 C SER 44 8.813 55.455 -12.162 1.00 2.00 C ATOM 857 O SER 44 7.614 55.711 -12.295 1.00 1.70 O ATOM 858 CB SER 44 10.035 57.557 -12.644 1.00 2.17 C ATOM 859 OG SER 44 10.513 57.755 -11.294 1.00 1.77 O ATOM 860 N LYS 45 9.310 54.508 -11.344 1.00 1.85 N ATOM 861 CA LYS 45 8.499 53.670 -10.461 1.00 2.28 C ATOM 862 C LYS 45 9.344 53.579 -9.212 1.00 2.00 C ATOM 863 O LYS 45 10.544 53.155 -9.235 1.00 1.70 O ATOM 864 CB LYS 45 8.339 52.256 -11.115 1.00 2.17 C ATOM 865 CG LYS 45 7.587 51.231 -10.217 1.00 2.17 C ATOM 866 CD LYS 45 6.754 50.311 -11.106 1.00 2.17 C ATOM 867 CE LYS 45 7.623 49.461 -12.020 1.00 2.17 C ATOM 868 NZ LYS 45 6.741 48.895 -13.032 1.00 1.85 N TER END