####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS344_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 17 - 45 4.84 7.86 LCS_AVERAGE: 62.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.90 9.88 LCS_AVERAGE: 24.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 0.77 10.07 LCS_AVERAGE: 17.82 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 25 3 3 4 4 5 7 10 10 12 13 21 25 27 30 32 34 37 38 39 40 LCS_GDT V 3 V 3 4 6 25 3 3 4 4 7 7 10 12 16 17 22 25 27 30 32 34 37 38 39 40 LCS_GDT Q 4 Q 4 4 6 25 3 3 4 4 7 7 10 12 16 17 22 25 27 27 31 34 37 38 39 40 LCS_GDT G 5 G 5 4 6 25 0 3 4 4 7 7 10 12 16 17 22 25 27 27 28 32 35 38 39 40 LCS_GDT P 6 P 6 4 6 25 3 3 5 5 8 13 15 19 20 24 26 27 29 30 32 34 37 38 39 40 LCS_GDT W 7 W 7 4 6 25 3 3 6 11 16 18 20 22 24 26 27 29 29 30 32 34 37 38 39 40 LCS_GDT V 8 V 8 5 6 25 4 6 6 12 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT G 9 G 9 5 6 25 4 4 5 13 14 16 19 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT S 10 S 10 5 6 25 4 4 5 6 8 10 14 17 18 20 25 27 30 31 33 34 37 38 39 40 LCS_GDT S 11 S 11 5 6 25 4 4 5 6 8 10 11 15 19 24 25 28 30 31 33 34 37 38 39 40 LCS_GDT Y 12 Y 12 5 6 25 4 4 5 5 8 10 11 13 16 18 23 27 30 31 33 34 37 38 39 40 LCS_GDT V 13 V 13 5 6 25 4 5 5 5 6 6 9 12 15 17 22 27 29 31 33 34 37 38 39 40 LCS_GDT A 14 A 14 5 5 25 4 5 5 5 8 10 11 13 16 17 22 22 22 27 29 33 34 36 39 40 LCS_GDT E 15 E 15 5 5 25 4 5 5 5 5 5 9 13 16 17 22 22 22 23 26 29 32 35 37 40 LCS_GDT T 16 T 16 5 5 28 4 5 5 6 8 10 11 13 16 17 22 23 27 31 33 34 37 38 39 40 LCS_GDT G 17 G 17 5 5 29 3 5 5 5 5 5 8 10 13 16 22 24 27 31 33 34 37 38 39 40 LCS_GDT Q 18 Q 18 4 4 29 3 3 4 6 8 10 11 13 16 17 22 27 29 31 33 34 37 38 39 40 LCS_GDT N 19 N 19 4 15 29 3 3 4 4 5 8 15 19 23 25 26 28 30 31 33 34 37 38 39 40 LCS_GDT W 20 W 20 14 16 29 8 12 14 14 14 15 17 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT A 21 A 21 14 16 29 10 12 14 14 14 16 19 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT S 22 S 22 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT L 23 L 23 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT A 24 A 24 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT A 25 A 25 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT N 26 N 26 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT E 27 E 27 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT L 28 L 28 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT R 29 R 29 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT V 30 V 30 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT T 31 T 31 14 16 29 3 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT E 32 E 32 14 16 29 6 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT R 33 R 33 14 16 29 5 10 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT P 34 P 34 4 16 29 2 4 5 5 8 13 15 20 23 25 27 29 30 31 33 34 37 38 39 40 LCS_GDT F 35 F 35 5 16 29 3 5 8 11 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT W 36 W 36 5 11 29 5 6 8 11 13 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT I 37 I 37 5 11 29 5 6 7 11 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT S 38 S 38 6 11 29 5 6 8 11 12 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT S 39 S 39 6 11 29 5 6 8 11 12 15 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT F 40 F 40 6 11 29 4 5 8 11 12 17 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT I 41 I 41 6 11 29 4 5 6 11 15 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 LCS_GDT G 42 G 42 6 11 29 4 5 7 11 12 15 20 23 25 26 27 29 30 31 33 34 37 38 38 40 LCS_GDT R 43 R 43 6 11 29 4 5 8 11 12 13 18 23 25 26 27 29 30 31 33 34 35 38 38 40 LCS_GDT S 44 S 44 6 11 29 4 5 8 11 12 13 16 17 20 24 27 29 29 30 31 32 33 35 35 36 LCS_GDT K 45 K 45 6 11 29 3 4 8 11 12 13 16 17 20 23 27 29 29 30 30 32 33 33 34 35 LCS_AVERAGE LCS_A: 35.14 ( 17.82 24.64 62.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 16 18 20 23 25 26 27 29 30 31 33 34 37 38 39 40 GDT PERCENT_AT 22.73 27.27 31.82 31.82 36.36 40.91 45.45 52.27 56.82 59.09 61.36 65.91 68.18 70.45 75.00 77.27 84.09 86.36 88.64 90.91 GDT RMS_LOCAL 0.33 0.58 0.77 0.77 1.82 2.11 2.34 2.75 2.94 3.04 3.16 3.56 4.01 4.32 4.80 5.03 5.89 6.03 6.24 6.22 GDT RMS_ALL_AT 9.89 9.73 10.07 10.07 8.76 8.64 8.51 8.20 8.28 8.39 8.42 8.78 7.75 7.63 7.55 7.50 7.33 7.39 7.41 7.21 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.211 0 0.115 0.113 14.402 0.000 0.000 - LGA V 3 V 3 12.243 0 0.036 0.102 12.681 0.000 0.000 11.546 LGA Q 4 Q 4 14.069 0 0.488 0.908 16.832 0.000 0.000 15.454 LGA G 5 G 5 12.373 0 0.176 0.176 13.144 0.000 0.000 - LGA P 6 P 6 8.883 0 0.657 0.611 10.981 0.000 0.000 9.444 LGA W 7 W 7 4.765 0 0.359 1.235 10.301 11.818 5.065 10.149 LGA V 8 V 8 2.323 0 0.642 0.910 6.742 28.636 19.221 6.742 LGA G 9 G 9 4.407 0 0.262 0.262 7.675 5.909 5.909 - LGA S 10 S 10 9.648 0 0.069 0.083 12.169 0.000 0.000 8.341 LGA S 11 S 11 9.131 0 0.277 0.630 11.708 0.000 0.000 9.195 LGA Y 12 Y 12 10.273 0 0.636 1.250 14.029 0.000 0.758 5.004 LGA V 13 V 13 13.882 0 0.613 0.579 15.437 0.000 0.000 15.437 LGA A 14 A 14 17.999 0 0.038 0.041 19.657 0.000 0.000 - LGA E 15 E 15 18.946 0 0.052 1.191 25.854 0.000 0.000 25.078 LGA T 16 T 16 14.750 0 0.140 1.066 15.976 0.000 0.000 13.728 LGA G 17 G 17 14.158 0 0.150 0.150 14.164 0.000 0.000 - LGA Q 18 Q 18 12.317 0 0.599 0.944 19.539 0.000 0.000 16.773 LGA N 19 N 19 7.326 0 0.030 1.059 11.488 1.818 0.909 10.533 LGA W 20 W 20 4.651 0 0.593 1.406 15.288 4.545 1.299 15.288 LGA A 21 A 21 3.786 0 0.101 0.117 4.230 20.455 17.455 - LGA S 22 S 22 1.777 0 0.063 0.646 2.780 56.364 48.485 2.607 LGA L 23 L 23 1.650 0 0.033 0.139 4.073 66.364 43.182 4.073 LGA A 24 A 24 1.271 0 0.045 0.053 2.056 65.455 60.000 - LGA A 25 A 25 1.643 0 0.053 0.056 2.288 51.364 51.273 - LGA N 26 N 26 1.675 0 0.049 0.631 2.957 45.455 45.227 2.957 LGA E 27 E 27 1.789 0 0.076 0.841 4.366 41.818 38.788 4.366 LGA L 28 L 28 2.761 0 0.009 0.052 3.543 23.636 26.818 2.811 LGA R 29 R 29 3.261 0 0.029 1.295 10.163 18.636 8.264 10.163 LGA V 30 V 30 3.048 0 0.068 0.076 3.361 25.000 23.377 3.133 LGA T 31 T 31 2.498 0 0.174 0.152 2.859 38.636 36.883 2.278 LGA E 32 E 32 2.481 0 0.125 0.226 4.224 35.455 22.020 3.767 LGA R 33 R 33 2.938 0 0.031 1.385 6.300 14.091 11.901 3.690 LGA P 34 P 34 5.547 0 0.385 0.603 8.190 1.364 0.779 8.190 LGA F 35 F 35 1.818 0 0.584 1.373 9.082 47.727 18.512 9.082 LGA W 36 W 36 3.210 0 0.107 1.217 9.805 27.727 10.909 5.947 LGA I 37 I 37 2.113 0 0.061 0.356 3.799 35.455 28.182 3.799 LGA S 38 S 38 3.369 0 0.086 0.143 4.409 15.455 12.121 4.409 LGA S 39 S 39 3.833 0 0.170 0.267 4.907 14.545 10.303 4.907 LGA F 40 F 40 2.553 0 0.043 0.965 4.587 35.455 21.157 4.587 LGA I 41 I 41 2.287 0 0.631 1.521 6.500 38.636 23.409 6.500 LGA G 42 G 42 3.785 0 0.036 0.036 4.998 9.091 9.091 - LGA R 43 R 43 5.129 0 0.067 1.221 11.580 1.364 0.826 11.580 LGA S 44 S 44 7.991 0 0.094 0.596 10.429 0.000 0.000 10.429 LGA K 45 K 45 9.187 0 0.638 0.753 12.073 0.000 0.000 12.073 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.130 7.080 8.020 17.779 13.685 5.455 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 23 2.75 47.159 42.434 0.807 LGA_LOCAL RMSD: 2.751 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.201 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.130 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.909205 * X + 0.010346 * Y + -0.416219 * Z + 2.596467 Y_new = 0.401595 * X + 0.285552 * Y + -0.870162 * Z + 70.561371 Z_new = 0.109849 * X + -0.958307 * Y + -0.263781 * Z + 19.847872 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.725663 -0.110071 -1.839401 [DEG: 156.1690 -6.3066 -105.3899 ] ZXZ: -0.446157 1.837736 3.027462 [DEG: -25.5629 105.2945 173.4608 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS344_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 23 2.75 42.434 7.13 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS344_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 525 N ALA 2 -1.604 29.338 13.222 1.00 1.85 N ATOM 526 CA ALA 2 -0.954 29.886 12.050 1.00 2.28 C ATOM 527 C ALA 2 -0.933 29.018 10.787 1.00 2.00 C ATOM 528 O ALA 2 -0.707 27.786 10.841 1.00 1.70 O ATOM 529 CB ALA 2 0.428 30.383 12.433 1.00 2.06 C ATOM 530 N VAL 3 -1.230 29.590 9.647 1.00 1.85 N ATOM 531 CA VAL 3 -1.215 28.866 8.370 1.00 2.28 C ATOM 532 C VAL 3 0.167 28.374 7.974 1.00 2.00 C ATOM 533 O VAL 3 1.151 29.103 7.993 1.00 1.70 O ATOM 534 CB VAL 3 -1.782 29.718 7.189 1.00 2.28 C ATOM 535 CG1 VAL 3 -1.768 28.883 5.884 1.00 2.06 C ATOM 536 CG2 VAL 3 -3.243 29.933 7.553 1.00 2.06 C ATOM 537 N GLN 4 0.247 27.114 7.553 1.00 1.85 N ATOM 538 CA GLN 4 1.495 26.448 7.332 1.00 2.28 C ATOM 539 C GLN 4 2.036 26.550 5.933 1.00 2.00 C ATOM 540 O GLN 4 2.489 25.612 5.280 1.00 1.70 O ATOM 541 CB GLN 4 1.413 24.971 7.840 1.00 2.17 C ATOM 542 CG GLN 4 1.102 24.738 9.366 1.00 2.17 C ATOM 543 CD GLN 4 2.188 25.284 10.233 1.00 2.00 C ATOM 544 OE1 GLN 4 3.252 24.713 10.429 1.00 1.70 O ATOM 545 NE2 GLN 4 1.934 26.481 10.847 1.00 1.85 N ATOM 546 N GLY 5 2.011 27.811 5.428 1.00 1.85 N ATOM 547 CA GLY 5 2.433 28.141 4.056 1.00 2.17 C ATOM 548 C GLY 5 3.915 28.508 3.923 1.00 2.00 C ATOM 549 O GLY 5 4.739 27.967 4.660 1.00 1.70 O ATOM 550 N PRO 6 4.270 29.344 2.964 1.00 1.85 N ATOM 551 CA PRO 6 5.600 29.978 2.841 1.00 2.28 C ATOM 552 C PRO 6 6.199 30.645 4.086 1.00 2.00 C ATOM 553 O PRO 6 5.497 31.046 5.003 1.00 1.70 O ATOM 554 CB PRO 6 5.426 30.921 1.649 1.00 2.17 C ATOM 555 CG PRO 6 4.328 30.219 0.802 1.00 2.17 C ATOM 556 CD PRO 6 3.381 29.678 1.835 1.00 2.17 C ATOM 557 N TRP 7 7.533 30.852 4.153 1.00 1.85 N ATOM 558 CA TRP 7 8.159 31.410 5.303 1.00 2.28 C ATOM 559 C TRP 7 8.011 32.932 5.436 1.00 2.00 C ATOM 560 O TRP 7 8.322 33.522 6.469 1.00 1.70 O ATOM 561 CB TRP 7 9.653 31.020 5.204 1.00 2.17 C ATOM 562 CG TRP 7 10.464 31.713 4.093 1.00 1.99 C ATOM 563 CD1 TRP 7 10.654 31.361 2.765 1.00 1.99 C ATOM 564 CD2 TRP 7 11.221 32.932 4.319 1.00 1.80 C ATOM 565 NE1 TRP 7 11.441 32.320 2.166 1.00 1.85 N ATOM 566 CE2 TRP 7 11.777 33.323 3.096 1.00 1.80 C ATOM 567 CE3 TRP 7 11.455 33.682 5.446 1.00 1.99 C ATOM 568 CZ2 TRP 7 12.587 34.432 2.980 1.00 1.99 C ATOM 569 CZ3 TRP 7 12.239 34.868 5.361 1.00 1.99 C ATOM 570 CH2 TRP 7 12.780 35.212 4.145 1.00 1.99 C ATOM 571 N VAL 8 7.552 33.643 4.397 1.00 1.85 N ATOM 572 CA VAL 8 7.405 35.089 4.459 1.00 2.28 C ATOM 573 C VAL 8 6.068 35.517 3.817 1.00 2.00 C ATOM 574 O VAL 8 5.567 34.906 2.868 1.00 1.70 O ATOM 575 CB VAL 8 8.647 35.739 3.830 1.00 2.28 C ATOM 576 CG1 VAL 8 8.827 35.349 2.358 1.00 2.06 C ATOM 577 CG2 VAL 8 8.608 37.276 3.880 1.00 2.06 C ATOM 578 N GLY 9 5.476 36.596 4.425 1.00 1.85 N ATOM 579 CA GLY 9 4.129 36.986 4.112 1.00 2.17 C ATOM 580 C GLY 9 3.915 37.640 2.766 1.00 2.00 C ATOM 581 O GLY 9 2.775 37.819 2.257 1.00 1.70 O ATOM 582 N SER 10 5.021 37.921 2.021 1.00 1.85 N ATOM 583 CA SER 10 5.041 38.440 0.637 1.00 2.28 C ATOM 584 C SER 10 4.676 37.444 -0.415 1.00 2.00 C ATOM 585 O SER 10 4.389 37.755 -1.575 1.00 1.70 O ATOM 586 CB SER 10 6.463 38.998 0.368 1.00 2.17 C ATOM 587 OG SER 10 7.521 38.057 0.735 1.00 1.77 O ATOM 588 N SER 11 4.710 36.161 -0.024 1.00 1.85 N ATOM 589 CA SER 11 4.607 35.001 -0.867 1.00 2.28 C ATOM 590 C SER 11 3.225 34.414 -0.761 1.00 2.00 C ATOM 591 O SER 11 2.969 33.293 -1.237 1.00 1.70 O ATOM 592 CB SER 11 5.683 33.920 -0.536 1.00 2.17 C ATOM 593 OG SER 11 6.997 34.330 -0.916 1.00 1.77 O ATOM 594 N TYR 12 2.246 35.143 -0.115 1.00 1.85 N ATOM 595 CA TYR 12 0.941 34.633 0.131 1.00 2.28 C ATOM 596 C TYR 12 -0.077 35.249 -0.810 1.00 2.00 C ATOM 597 O TYR 12 -0.016 36.428 -1.129 1.00 1.70 O ATOM 598 CB TYR 12 0.491 34.948 1.597 1.00 2.17 C ATOM 599 CG TYR 12 1.092 33.903 2.556 1.00 1.99 C ATOM 600 CD1 TYR 12 2.480 33.797 2.765 1.00 1.99 C ATOM 601 CD2 TYR 12 0.262 32.985 3.209 1.00 1.99 C ATOM 602 CE1 TYR 12 2.985 32.895 3.683 1.00 1.99 C ATOM 603 CE2 TYR 12 0.759 31.998 4.047 1.00 1.99 C ATOM 604 CZ TYR 12 2.120 31.985 4.346 1.00 1.99 C ATOM 605 OH TYR 12 2.607 31.076 5.264 1.00 1.77 O ATOM 606 N VAL 13 -1.092 34.429 -1.143 1.00 1.85 N ATOM 607 CA VAL 13 -2.417 34.791 -1.653 1.00 2.28 C ATOM 608 C VAL 13 -3.082 35.605 -0.607 1.00 2.00 C ATOM 609 O VAL 13 -2.908 35.342 0.594 1.00 1.70 O ATOM 610 CB VAL 13 -3.216 33.580 -2.065 1.00 2.28 C ATOM 611 CG1 VAL 13 -4.631 34.025 -2.507 1.00 2.06 C ATOM 612 CG2 VAL 13 -2.457 32.907 -3.256 1.00 2.06 C ATOM 613 N ALA 14 -3.792 36.696 -0.935 1.00 1.85 N ATOM 614 CA ALA 14 -4.279 37.598 0.112 1.00 2.28 C ATOM 615 C ALA 14 -5.263 36.956 1.081 1.00 2.00 C ATOM 616 O ALA 14 -5.198 37.254 2.280 1.00 1.70 O ATOM 617 CB ALA 14 -4.884 38.831 -0.616 1.00 2.06 C ATOM 618 N GLU 15 -6.162 36.055 0.635 1.00 1.85 N ATOM 619 CA GLU 15 -7.077 35.354 1.474 1.00 2.28 C ATOM 620 C GLU 15 -6.337 34.424 2.447 1.00 2.00 C ATOM 621 O GLU 15 -6.636 34.388 3.628 1.00 1.70 O ATOM 622 CB GLU 15 -8.018 34.493 0.632 1.00 2.17 C ATOM 623 CG GLU 15 -8.869 35.205 -0.420 1.00 2.17 C ATOM 624 CD GLU 15 -9.775 34.284 -1.259 1.00 2.00 C ATOM 625 OE1 GLU 15 -9.788 33.049 -1.009 1.00 1.70 O ATOM 626 OE2 GLU 15 -10.422 34.758 -2.197 1.00 1.70 O ATOM 627 N THR 16 -5.334 33.677 1.966 1.00 1.85 N ATOM 628 CA THR 16 -4.531 32.851 2.816 1.00 2.28 C ATOM 629 C THR 16 -3.656 33.658 3.772 1.00 2.00 C ATOM 630 O THR 16 -3.488 33.384 4.958 1.00 1.70 O ATOM 631 CB THR 16 -3.599 31.979 1.934 1.00 2.28 C ATOM 632 OG1 THR 16 -4.359 31.269 0.941 1.00 1.77 O ATOM 633 CG2 THR 16 -2.949 30.920 2.772 1.00 2.06 C ATOM 634 N GLY 17 -3.077 34.717 3.301 1.00 1.85 N ATOM 635 CA GLY 17 -2.213 35.565 4.104 1.00 2.17 C ATOM 636 C GLY 17 -2.945 36.383 5.144 1.00 2.00 C ATOM 637 O GLY 17 -2.409 36.780 6.162 1.00 1.70 O ATOM 638 N GLN 18 -4.230 36.718 4.903 1.00 1.85 N ATOM 639 CA GLN 18 -5.123 37.252 5.883 1.00 2.28 C ATOM 640 C GLN 18 -5.374 36.254 7.024 1.00 2.00 C ATOM 641 O GLN 18 -5.279 36.592 8.223 1.00 1.70 O ATOM 642 CB GLN 18 -6.455 37.599 5.173 1.00 2.17 C ATOM 643 CG GLN 18 -6.456 38.941 4.407 1.00 2.17 C ATOM 644 CD GLN 18 -7.650 39.094 3.501 1.00 2.00 C ATOM 645 OE1 GLN 18 -8.775 38.929 3.928 1.00 1.70 O ATOM 646 NE2 GLN 18 -7.407 39.458 2.242 1.00 1.85 N ATOM 647 N ASN 19 -5.545 34.944 6.657 1.00 1.85 N ATOM 648 CA ASN 19 -5.705 33.919 7.666 1.00 2.28 C ATOM 649 C ASN 19 -4.402 33.687 8.415 1.00 2.00 C ATOM 650 O ASN 19 -4.489 33.407 9.632 1.00 1.70 O ATOM 651 CB ASN 19 -6.293 32.616 7.077 1.00 2.17 C ATOM 652 CG ASN 19 -7.750 32.807 6.852 1.00 2.00 C ATOM 653 OD1 ASN 19 -8.533 32.386 7.709 1.00 1.70 O ATOM 654 ND2 ASN 19 -8.207 33.486 5.763 1.00 1.85 N ATOM 655 N TRP 20 -3.205 33.727 7.785 1.00 1.85 N ATOM 656 CA TRP 20 -1.985 33.596 8.560 1.00 2.28 C ATOM 657 C TRP 20 -1.785 34.718 9.626 1.00 2.00 C ATOM 658 O TRP 20 -1.557 34.422 10.783 1.00 1.70 O ATOM 659 CB TRP 20 -0.685 33.493 7.702 1.00 2.17 C ATOM 660 CG TRP 20 0.599 33.140 8.400 1.00 1.99 C ATOM 661 CD1 TRP 20 0.702 32.633 9.658 1.00 1.99 C ATOM 662 CD2 TRP 20 1.977 33.390 7.946 1.00 1.80 C ATOM 663 NE1 TRP 20 2.032 32.522 10.037 1.00 1.85 N ATOM 664 CE2 TRP 20 2.814 32.976 9.007 1.00 1.80 C ATOM 665 CE3 TRP 20 2.490 33.908 6.764 1.00 1.99 C ATOM 666 CZ2 TRP 20 4.154 33.122 8.906 1.00 1.99 C ATOM 667 CZ3 TRP 20 3.893 33.994 6.642 1.00 1.99 C ATOM 668 CH2 TRP 20 4.694 33.665 7.707 1.00 1.99 C ATOM 669 N ALA 21 -2.011 35.982 9.274 1.00 1.85 N ATOM 670 CA ALA 21 -1.990 37.057 10.269 1.00 2.28 C ATOM 671 C ALA 21 -3.046 36.959 11.355 1.00 2.00 C ATOM 672 O ALA 21 -2.696 36.999 12.536 1.00 1.70 O ATOM 673 CB ALA 21 -2.256 38.331 9.469 1.00 2.06 C ATOM 674 N SER 22 -4.323 36.670 10.978 1.00 1.85 N ATOM 675 CA SER 22 -5.392 36.388 11.964 1.00 2.28 C ATOM 676 C SER 22 -5.031 35.300 12.941 1.00 2.00 C ATOM 677 O SER 22 -5.080 35.433 14.157 1.00 1.70 O ATOM 678 CB SER 22 -6.672 35.945 11.245 1.00 2.17 C ATOM 679 OG SER 22 -7.814 35.891 12.129 1.00 1.77 O ATOM 680 N LEU 23 -4.622 34.116 12.436 1.00 1.85 N ATOM 681 CA LEU 23 -4.344 33.022 13.315 1.00 2.28 C ATOM 682 C LEU 23 -3.043 33.128 14.067 1.00 2.00 C ATOM 683 O LEU 23 -2.959 32.777 15.252 1.00 1.70 O ATOM 684 CB LEU 23 -4.449 31.678 12.537 1.00 2.17 C ATOM 685 CG LEU 23 -5.838 31.426 11.847 1.00 2.28 C ATOM 686 CD1 LEU 23 -5.734 30.342 10.809 1.00 2.06 C ATOM 687 CD2 LEU 23 -6.891 30.998 12.874 1.00 2.06 C ATOM 688 N ALA 24 -2.065 33.788 13.479 1.00 1.85 N ATOM 689 CA ALA 24 -0.867 34.195 14.198 1.00 2.28 C ATOM 690 C ALA 24 -1.058 35.226 15.274 1.00 2.00 C ATOM 691 O ALA 24 -0.411 35.110 16.310 1.00 1.70 O ATOM 692 CB ALA 24 0.238 34.687 13.191 1.00 2.06 C ATOM 693 N ALA 25 -1.911 36.187 15.073 1.00 1.85 N ATOM 694 CA ALA 25 -2.298 37.138 16.053 1.00 2.28 C ATOM 695 C ALA 25 -2.905 36.566 17.300 1.00 2.00 C ATOM 696 O ALA 25 -2.637 37.057 18.413 1.00 1.70 O ATOM 697 CB ALA 25 -3.241 38.182 15.432 1.00 2.06 C ATOM 698 N ASN 26 -3.698 35.487 17.172 1.00 1.85 N ATOM 699 CA ASN 26 -4.152 34.682 18.295 1.00 2.28 C ATOM 700 C ASN 26 -3.010 33.995 19.027 1.00 2.00 C ATOM 701 O ASN 26 -2.943 34.075 20.249 1.00 1.70 O ATOM 702 CB ASN 26 -5.188 33.599 17.788 1.00 2.17 C ATOM 703 CG ASN 26 -6.525 34.282 17.460 1.00 2.00 C ATOM 704 OD1 ASN 26 -7.417 34.377 18.298 1.00 1.70 O ATOM 705 ND2 ASN 26 -6.719 34.717 16.191 1.00 1.85 N ATOM 706 N GLU 27 -2.067 33.336 18.291 1.00 1.85 N ATOM 707 CA GLU 27 -0.855 32.742 18.874 1.00 2.28 C ATOM 708 C GLU 27 0.028 33.770 19.637 1.00 2.00 C ATOM 709 O GLU 27 0.565 33.474 20.723 1.00 1.70 O ATOM 710 CB GLU 27 0.061 32.069 17.848 1.00 2.17 C ATOM 711 CG GLU 27 -0.609 30.827 17.171 1.00 2.17 C ATOM 712 CD GLU 27 0.237 30.210 16.036 1.00 2.00 C ATOM 713 OE1 GLU 27 1.350 30.679 15.760 1.00 1.70 O ATOM 714 OE2 GLU 27 -0.196 29.127 15.564 1.00 1.70 O ATOM 715 N LEU 28 0.187 34.973 19.071 1.00 1.85 N ATOM 716 CA LEU 28 1.070 35.996 19.585 1.00 2.28 C ATOM 717 C LEU 28 0.354 36.921 20.539 1.00 2.00 C ATOM 718 O LEU 28 0.938 37.919 20.970 1.00 1.70 O ATOM 719 CB LEU 28 1.616 36.853 18.391 1.00 2.17 C ATOM 720 CG LEU 28 2.485 36.085 17.398 1.00 2.28 C ATOM 721 CD1 LEU 28 2.841 37.013 16.249 1.00 2.06 C ATOM 722 CD2 LEU 28 3.784 35.624 18.095 1.00 2.06 C ATOM 723 N ARG 29 -0.917 36.676 20.880 1.00 1.85 N ATOM 724 CA ARG 29 -1.643 37.377 21.906 1.00 2.28 C ATOM 725 C ARG 29 -1.889 38.834 21.569 1.00 2.00 C ATOM 726 O ARG 29 -1.886 39.697 22.437 1.00 1.70 O ATOM 727 CB ARG 29 -1.032 37.186 23.347 1.00 2.17 C ATOM 728 CG ARG 29 -0.972 35.681 23.714 1.00 2.17 C ATOM 729 CD ARG 29 -0.569 35.405 25.146 1.00 2.17 C ATOM 730 NE ARG 29 -0.461 33.907 25.259 1.00 1.85 N ATOM 731 CZ ARG 29 0.579 33.204 24.930 1.00 2.00 C ATOM 732 NH1 ARG 29 1.740 33.743 24.607 1.00 1.85 N ATOM 733 NH2 ARG 29 0.518 31.874 24.871 1.00 1.85 N ATOM 734 N VAL 30 -2.113 39.163 20.280 1.00 1.85 N ATOM 735 CA VAL 30 -2.255 40.480 19.696 1.00 2.28 C ATOM 736 C VAL 30 -3.708 40.960 19.718 1.00 2.00 C ATOM 737 O VAL 30 -4.635 40.358 19.177 1.00 1.70 O ATOM 738 CB VAL 30 -1.735 40.498 18.262 1.00 2.28 C ATOM 739 CG1 VAL 30 -1.895 41.914 17.575 1.00 2.06 C ATOM 740 CG2 VAL 30 -0.256 40.108 18.255 1.00 2.06 C ATOM 741 N THR 31 -3.953 42.025 20.476 1.00 1.85 N ATOM 742 CA THR 31 -5.239 42.633 20.674 1.00 2.28 C ATOM 743 C THR 31 -5.650 43.396 19.438 1.00 2.00 C ATOM 744 O THR 31 -6.786 43.281 18.997 1.00 1.70 O ATOM 745 CB THR 31 -5.409 43.552 21.861 1.00 2.28 C ATOM 746 OG1 THR 31 -4.460 44.622 21.845 1.00 1.77 O ATOM 747 CG2 THR 31 -5.196 42.700 23.148 1.00 2.06 C ATOM 748 N GLU 32 -4.720 44.149 18.857 1.00 1.85 N ATOM 749 CA GLU 32 -4.866 44.882 17.640 1.00 2.28 C ATOM 750 C GLU 32 -5.221 44.059 16.377 1.00 2.00 C ATOM 751 O GLU 32 -5.241 42.847 16.367 1.00 1.70 O ATOM 752 CB GLU 32 -3.537 45.663 17.340 1.00 2.17 C ATOM 753 CG GLU 32 -3.033 46.672 18.424 1.00 2.17 C ATOM 754 CD GLU 32 -2.366 46.067 19.620 1.00 2.00 C ATOM 755 OE1 GLU 32 -2.163 44.824 19.727 1.00 1.70 O ATOM 756 OE2 GLU 32 -2.042 46.918 20.490 1.00 1.70 O ATOM 757 N ARG 33 -5.557 44.700 15.255 1.00 1.85 N ATOM 758 CA ARG 33 -6.234 43.998 14.185 1.00 2.28 C ATOM 759 C ARG 33 -5.196 43.475 13.154 1.00 2.00 C ATOM 760 O ARG 33 -4.341 44.206 12.687 1.00 1.70 O ATOM 761 CB ARG 33 -7.378 44.885 13.668 1.00 2.17 C ATOM 762 CG ARG 33 -8.414 45.303 14.759 1.00 2.17 C ATOM 763 CD ARG 33 -9.326 44.161 15.300 1.00 2.17 C ATOM 764 NE ARG 33 -8.592 43.310 16.334 1.00 1.85 N ATOM 765 CZ ARG 33 -8.586 41.980 16.344 1.00 2.00 C ATOM 766 NH1 ARG 33 -9.300 41.257 15.512 1.00 1.85 N ATOM 767 NH2 ARG 33 -7.892 41.358 17.286 1.00 1.85 N ATOM 768 N PRO 34 -5.191 42.210 12.743 1.00 1.85 N ATOM 769 CA PRO 34 -4.062 41.622 12.022 1.00 2.28 C ATOM 770 C PRO 34 -4.409 41.444 10.562 1.00 2.00 C ATOM 771 O PRO 34 -4.604 40.344 10.116 1.00 1.70 O ATOM 772 CB PRO 34 -3.890 40.338 12.747 1.00 2.17 C ATOM 773 CG PRO 34 -5.314 39.895 13.043 1.00 2.17 C ATOM 774 CD PRO 34 -5.987 41.194 13.383 1.00 2.17 C ATOM 775 N PHE 35 -4.469 42.585 9.844 1.00 1.85 N ATOM 776 CA PHE 35 -5.107 42.683 8.536 1.00 2.28 C ATOM 777 C PHE 35 -4.585 41.705 7.505 1.00 2.00 C ATOM 778 O PHE 35 -5.412 41.009 6.870 1.00 1.70 O ATOM 779 CB PHE 35 -4.891 44.068 7.929 1.00 2.17 C ATOM 780 CG PHE 35 -5.441 45.124 8.763 1.00 1.99 C ATOM 781 CD1 PHE 35 -6.600 44.939 9.583 1.00 1.99 C ATOM 782 CD2 PHE 35 -4.819 46.413 8.724 1.00 1.99 C ATOM 783 CE1 PHE 35 -6.989 46.007 10.405 1.00 1.99 C ATOM 784 CE2 PHE 35 -5.278 47.458 9.532 1.00 1.99 C ATOM 785 CZ PHE 35 -6.331 47.221 10.407 1.00 1.99 C ATOM 786 N TRP 36 -3.252 41.662 7.248 1.00 1.85 N ATOM 787 CA TRP 36 -2.728 40.762 6.302 1.00 2.28 C ATOM 788 C TRP 36 -1.275 40.524 6.612 1.00 2.00 C ATOM 789 O TRP 36 -0.587 41.315 7.272 1.00 1.70 O ATOM 790 CB TRP 36 -2.847 41.477 4.927 1.00 2.17 C ATOM 791 CG TRP 36 -2.481 40.788 3.611 1.00 1.99 C ATOM 792 CD1 TRP 36 -1.946 39.520 3.360 1.00 1.99 C ATOM 793 CD2 TRP 36 -2.569 41.430 2.319 1.00 1.80 C ATOM 794 NE1 TRP 36 -1.741 39.340 2.018 1.00 1.85 N ATOM 795 CE2 TRP 36 -2.121 40.487 1.355 1.00 1.80 C ATOM 796 CE3 TRP 36 -3.012 42.730 1.958 1.00 1.99 C ATOM 797 CZ2 TRP 36 -2.087 40.835 0.013 1.00 1.99 C ATOM 798 CZ3 TRP 36 -2.985 43.061 0.578 1.00 1.99 C ATOM 799 CH2 TRP 36 -2.503 42.131 -0.380 1.00 1.99 C ATOM 800 N ILE 37 -0.769 39.336 6.253 1.00 1.85 N ATOM 801 CA ILE 37 0.535 38.931 6.714 1.00 2.28 C ATOM 802 C ILE 37 1.615 39.492 5.848 1.00 2.00 C ATOM 803 O ILE 37 2.769 39.453 6.229 1.00 1.70 O ATOM 804 CB ILE 37 0.581 37.417 6.877 1.00 2.28 C ATOM 805 CG1 ILE 37 1.689 36.971 7.865 1.00 2.17 C ATOM 806 CG2 ILE 37 0.716 36.743 5.462 1.00 2.06 C ATOM 807 CD1 ILE 37 1.687 37.534 9.273 1.00 2.06 C ATOM 808 N SER 38 1.237 40.105 4.703 1.00 1.85 N ATOM 809 CA SER 38 2.226 40.808 3.894 1.00 2.28 C ATOM 810 C SER 38 2.939 41.902 4.655 1.00 2.00 C ATOM 811 O SER 38 4.134 42.107 4.460 1.00 1.70 O ATOM 812 CB SER 38 1.528 41.360 2.601 1.00 2.17 C ATOM 813 OG SER 38 0.400 42.168 2.963 1.00 1.77 O ATOM 814 N SER 39 2.205 42.620 5.510 1.00 1.85 N ATOM 815 CA SER 39 2.755 43.606 6.419 1.00 2.28 C ATOM 816 C SER 39 2.828 43.154 7.866 1.00 2.00 C ATOM 817 O SER 39 3.843 43.385 8.513 1.00 1.70 O ATOM 818 CB SER 39 1.945 44.935 6.345 1.00 2.17 C ATOM 819 OG SER 39 0.535 44.767 6.580 1.00 1.77 O ATOM 820 N PHE 40 1.852 42.410 8.427 1.00 1.85 N ATOM 821 CA PHE 40 1.923 41.875 9.767 1.00 2.28 C ATOM 822 C PHE 40 3.125 40.969 10.069 1.00 2.00 C ATOM 823 O PHE 40 3.519 40.890 11.231 1.00 1.70 O ATOM 824 CB PHE 40 0.551 41.225 9.997 1.00 2.17 C ATOM 825 CG PHE 40 0.271 40.914 11.424 1.00 1.99 C ATOM 826 CD1 PHE 40 0.026 41.973 12.311 1.00 1.99 C ATOM 827 CD2 PHE 40 0.230 39.593 11.929 1.00 1.99 C ATOM 828 CE1 PHE 40 -0.200 41.747 13.680 1.00 1.99 C ATOM 829 CE2 PHE 40 0.037 39.374 13.298 1.00 1.99 C ATOM 830 CZ PHE 40 -0.123 40.439 14.164 1.00 1.99 C ATOM 831 N ILE 41 3.761 40.334 9.069 1.00 1.85 N ATOM 832 CA ILE 41 5.022 39.630 9.333 1.00 2.28 C ATOM 833 C ILE 41 6.223 40.510 9.644 1.00 2.00 C ATOM 834 O ILE 41 7.123 40.121 10.336 1.00 1.70 O ATOM 835 CB ILE 41 5.431 38.668 8.161 1.00 2.28 C ATOM 836 CG1 ILE 41 6.407 37.547 8.583 1.00 2.17 C ATOM 837 CG2 ILE 41 5.985 39.459 6.925 1.00 2.06 C ATOM 838 CD1 ILE 41 5.808 36.508 9.514 1.00 2.06 C ATOM 839 N GLY 42 6.252 41.754 9.135 1.00 1.85 N ATOM 840 CA GLY 42 7.331 42.692 9.409 1.00 2.17 C ATOM 841 C GLY 42 7.198 43.557 10.590 1.00 2.00 C ATOM 842 O GLY 42 8.121 44.246 10.983 1.00 1.70 O ATOM 843 N ARG 43 6.059 43.514 11.313 1.00 1.85 N ATOM 844 CA ARG 43 5.937 44.194 12.569 1.00 2.28 C ATOM 845 C ARG 43 6.780 43.738 13.713 1.00 2.00 C ATOM 846 O ARG 43 7.131 42.572 13.862 1.00 1.70 O ATOM 847 CB ARG 43 4.450 44.353 13.057 1.00 2.17 C ATOM 848 CG ARG 43 3.521 44.947 11.980 1.00 2.17 C ATOM 849 CD ARG 43 3.954 46.282 11.399 1.00 2.17 C ATOM 850 NE ARG 43 2.979 46.720 10.400 1.00 1.85 N ATOM 851 CZ ARG 43 2.883 47.996 10.001 1.00 2.00 C ATOM 852 NH1 ARG 43 3.699 48.960 10.374 1.00 1.85 N ATOM 853 NH2 ARG 43 1.851 48.378 9.264 1.00 1.85 N ATOM 854 N SER 44 7.132 44.742 14.573 1.00 1.85 N ATOM 855 CA SER 44 7.772 44.569 15.870 1.00 2.28 C ATOM 856 C SER 44 6.750 44.199 16.904 1.00 2.00 C ATOM 857 O SER 44 5.555 44.240 16.649 1.00 1.70 O ATOM 858 CB SER 44 8.442 45.908 16.320 1.00 2.17 C ATOM 859 OG SER 44 7.535 46.982 16.089 1.00 1.77 O ATOM 860 N LYS 45 7.216 43.752 18.096 1.00 1.85 N ATOM 861 CA LYS 45 6.303 43.315 19.200 1.00 2.28 C ATOM 862 C LYS 45 5.396 44.429 19.684 1.00 2.00 C ATOM 863 O LYS 45 4.268 44.204 20.050 1.00 1.70 O ATOM 864 CB LYS 45 7.085 42.794 20.409 1.00 2.17 C ATOM 865 CG LYS 45 7.823 41.485 20.094 1.00 2.17 C ATOM 866 CD LYS 45 8.452 40.786 21.312 1.00 2.17 C ATOM 867 CE LYS 45 8.865 39.320 21.063 1.00 2.17 C ATOM 868 NZ LYS 45 9.112 38.645 22.292 1.00 1.85 N TER END