####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS344_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.95 7.24 LONGEST_CONTINUOUS_SEGMENT: 35 9 - 43 4.99 7.32 LCS_AVERAGE: 74.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.95 8.48 LCS_AVERAGE: 28.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.95 8.97 LONGEST_CONTINUOUS_SEGMENT: 12 21 - 32 0.95 9.02 LCS_AVERAGE: 17.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 3 3 3 3 5 6 8 13 17 21 25 27 29 31 33 34 37 37 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 6 11 15 17 18 21 25 27 29 32 34 35 36 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 8 11 15 17 18 21 25 27 29 31 34 35 36 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 8 11 15 19 23 25 28 29 31 33 35 37 37 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 8 11 15 17 23 25 28 29 31 33 35 37 37 39 40 LCS_GDT W 7 W 7 5 5 34 3 5 5 5 6 6 8 10 17 18 23 25 28 30 32 34 37 37 39 40 LCS_GDT V 8 V 8 3 10 35 3 8 14 16 16 18 19 22 25 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT G 9 G 9 6 10 35 3 5 6 9 10 18 19 21 24 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT S 10 S 10 8 10 35 3 5 8 9 15 17 20 22 25 26 26 28 30 31 33 35 37 37 39 40 LCS_GDT S 11 S 11 8 10 35 3 5 8 9 10 11 14 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT Y 12 Y 12 8 10 35 3 6 8 9 10 11 14 19 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 13 V 13 8 10 35 3 6 8 9 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 14 A 14 8 10 35 4 6 8 9 10 11 14 17 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 15 E 15 8 10 35 4 6 8 9 10 11 14 14 15 16 22 26 30 32 33 34 36 37 39 40 LCS_GDT T 16 T 16 8 10 35 4 6 8 9 10 11 14 14 15 20 25 27 30 32 33 35 37 37 39 40 LCS_GDT G 17 G 17 8 10 35 4 6 8 9 10 11 14 14 15 16 18 23 27 30 33 35 37 37 39 40 LCS_GDT Q 18 Q 18 4 10 35 3 3 4 8 10 11 14 14 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 19 N 19 4 16 35 3 3 4 4 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 20 W 20 12 18 35 7 10 12 16 16 18 19 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 21 A 21 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 22 S 22 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 23 L 23 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 24 A 24 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 25 A 25 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 26 N 26 12 18 35 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 27 E 27 12 18 35 6 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 28 L 28 12 18 35 6 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 29 R 29 12 18 35 6 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 30 V 30 12 18 35 6 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT T 31 T 31 12 18 35 3 8 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 32 E 32 12 18 35 3 8 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 33 R 33 11 18 35 3 8 12 15 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT P 34 P 34 5 18 35 5 8 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 35 F 35 3 18 35 3 3 3 5 8 13 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 36 W 36 7 18 35 3 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 37 I 37 7 18 35 3 7 9 11 13 16 18 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 38 S 38 7 9 35 4 7 7 8 8 9 13 18 22 25 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 39 S 39 7 9 35 4 7 7 8 8 10 14 18 23 25 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 40 F 40 7 9 35 4 7 7 8 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 41 I 41 7 9 35 4 7 7 8 8 11 14 18 23 25 26 28 30 32 33 35 37 37 39 40 LCS_GDT G 42 G 42 7 9 35 3 7 7 8 8 9 12 17 20 24 25 27 30 32 33 34 35 37 38 39 LCS_GDT R 43 R 43 7 9 35 0 7 7 8 8 10 11 13 20 22 25 27 30 32 33 34 35 36 38 39 LCS_GDT S 44 S 44 3 9 33 1 3 3 5 6 9 10 11 11 13 20 22 26 29 29 31 33 33 35 35 LCS_GDT K 45 K 45 3 3 14 0 3 3 4 4 5 5 8 9 11 13 16 16 17 20 20 22 25 25 28 LCS_AVERAGE LCS_A: 40.24 ( 17.87 28.15 74.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 16 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 GDT PERCENT_AT 15.91 22.73 31.82 36.36 36.36 40.91 45.45 50.00 56.82 59.09 59.09 63.64 68.18 72.73 75.00 79.55 84.09 84.09 88.64 90.91 GDT RMS_LOCAL 0.25 0.59 1.03 1.20 1.20 1.48 2.47 2.55 2.86 2.94 2.94 3.52 4.15 4.54 4.63 4.89 5.19 5.19 5.52 5.73 GDT RMS_ALL_AT 9.14 8.78 8.83 8.73 8.73 8.75 7.48 7.82 7.63 7.70 7.70 7.46 7.22 7.55 7.44 7.19 7.26 7.26 7.33 7.26 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.897 0 0.090 0.101 10.590 0.000 0.000 - LGA V 3 V 3 11.024 0 0.567 0.604 12.631 0.000 0.000 12.631 LGA Q 4 Q 4 11.857 0 0.147 0.929 19.134 0.000 0.000 18.651 LGA G 5 G 5 8.915 0 0.200 0.200 10.556 0.000 0.000 - LGA P 6 P 6 8.128 0 0.668 0.611 10.109 0.000 0.000 9.664 LGA W 7 W 7 9.235 0 0.501 1.207 19.946 0.000 0.000 19.496 LGA V 8 V 8 3.052 0 0.591 1.425 5.258 19.091 11.169 5.143 LGA G 9 G 9 4.284 0 0.438 0.438 4.284 17.273 17.273 - LGA S 10 S 10 3.253 0 0.127 0.168 4.728 16.364 15.758 3.174 LGA S 11 S 11 4.255 0 0.045 0.681 6.410 5.909 5.152 4.035 LGA Y 12 Y 12 4.833 0 0.115 1.356 11.758 2.273 1.212 11.758 LGA V 13 V 13 5.282 0 0.207 1.286 9.753 2.727 1.558 6.422 LGA A 14 A 14 10.301 0 0.034 0.039 14.044 0.000 0.000 - LGA E 15 E 15 13.041 0 0.024 1.137 16.901 0.000 0.000 16.901 LGA T 16 T 16 10.972 0 0.142 0.192 11.135 0.000 0.000 6.696 LGA G 17 G 17 11.911 0 0.562 0.562 11.911 0.000 0.000 - LGA Q 18 Q 18 9.133 0 0.683 1.073 15.652 0.000 0.000 14.159 LGA N 19 N 19 3.912 0 0.064 1.110 6.986 18.182 11.364 6.986 LGA W 20 W 20 3.342 0 0.613 1.332 14.388 30.909 8.831 14.388 LGA A 21 A 21 1.527 0 0.049 0.060 2.135 59.091 60.364 - LGA S 22 S 22 1.485 0 0.058 0.599 2.277 61.818 58.485 1.363 LGA L 23 L 23 1.727 0 0.066 0.137 4.050 62.273 40.227 4.050 LGA A 24 A 24 1.513 0 0.039 0.054 1.961 58.182 56.727 - LGA A 25 A 25 1.493 0 0.047 0.059 2.058 55.000 57.091 - LGA N 26 N 26 1.385 0 0.070 0.721 3.328 65.455 59.773 3.328 LGA E 27 E 27 1.239 0 0.070 0.777 3.255 58.182 54.747 3.255 LGA L 28 L 28 1.777 0 0.054 0.074 2.295 47.727 49.318 1.865 LGA R 29 R 29 2.044 0 0.102 1.629 10.096 41.364 20.992 10.096 LGA V 30 V 30 2.096 0 0.093 1.107 3.200 51.818 41.558 3.200 LGA T 31 T 31 0.720 0 0.645 0.878 4.133 60.000 49.870 2.385 LGA E 32 E 32 1.037 0 0.114 1.426 4.087 78.182 50.303 3.025 LGA R 33 R 33 2.737 0 0.041 0.989 14.087 20.455 7.438 14.087 LGA P 34 P 34 1.942 0 0.658 0.640 4.883 32.727 26.753 3.774 LGA F 35 F 35 3.834 0 0.592 1.330 11.234 34.545 12.562 11.115 LGA W 36 W 36 1.234 0 0.586 1.153 6.424 58.182 35.844 5.311 LGA I 37 I 37 4.224 0 0.135 0.966 8.588 5.000 2.500 8.588 LGA S 38 S 38 8.009 0 0.036 0.581 10.801 0.000 0.000 10.801 LGA S 39 S 39 7.417 0 0.087 0.700 8.613 0.000 0.000 8.104 LGA F 40 F 40 4.667 0 0.160 1.304 8.475 0.455 3.306 8.098 LGA I 41 I 41 8.591 0 0.572 0.616 12.128 0.000 0.000 11.509 LGA G 42 G 42 11.917 0 0.553 0.553 14.309 0.000 0.000 - LGA R 43 R 43 12.356 0 0.634 1.066 17.657 0.000 0.000 17.657 LGA S 44 S 44 18.038 0 0.624 0.799 21.613 0.000 0.000 18.028 LGA K 45 K 45 21.258 0 0.049 0.857 23.271 0.000 0.000 20.792 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.027 7.123 8.521 21.890 17.277 7.636 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.55 47.159 43.062 0.832 LGA_LOCAL RMSD: 2.546 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.817 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.027 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.859555 * X + -0.355647 * Y + -0.366988 * Z + -0.140430 Y_new = 0.021126 * X + -0.692774 * Y + 0.720845 * Z + 44.774357 Z_new = -0.510606 * X + -0.627359 * Y + -0.587964 * Z + -12.461541 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.024572 0.535890 -2.323791 [DEG: 1.4079 30.7042 -133.1434 ] ZXZ: -2.670685 2.199336 -2.458434 [DEG: -153.0190 126.0127 -140.8579 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS344_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.55 43.062 7.03 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS344_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 525 N ALA 2 4.616 40.552 15.074 1.00 1.85 N ATOM 526 CA ALA 2 3.711 41.494 15.676 1.00 2.28 C ATOM 527 C ALA 2 4.439 42.726 16.255 1.00 2.00 C ATOM 528 O ALA 2 5.514 42.675 16.862 1.00 1.70 O ATOM 529 CB ALA 2 2.847 40.883 16.786 1.00 2.06 C ATOM 530 N VAL 3 3.863 43.942 16.160 1.00 1.85 N ATOM 531 CA VAL 3 2.527 44.271 15.697 1.00 2.28 C ATOM 532 C VAL 3 2.528 44.503 14.193 1.00 2.00 C ATOM 533 O VAL 3 1.765 43.828 13.507 1.00 1.70 O ATOM 534 CB VAL 3 1.913 45.472 16.430 1.00 2.28 C ATOM 535 CG1 VAL 3 0.464 45.687 15.889 1.00 2.06 C ATOM 536 CG2 VAL 3 1.820 45.125 17.969 1.00 2.06 C ATOM 537 N GLN 4 3.307 45.447 13.667 1.00 1.85 N ATOM 538 CA GLN 4 3.149 45.854 12.290 1.00 2.28 C ATOM 539 C GLN 4 4.061 45.116 11.316 1.00 2.00 C ATOM 540 O GLN 4 5.264 45.169 11.414 1.00 1.70 O ATOM 541 CB GLN 4 3.384 47.399 12.153 1.00 2.17 C ATOM 542 CG GLN 4 2.397 48.294 12.965 1.00 2.17 C ATOM 543 CD GLN 4 0.921 48.096 12.611 1.00 2.00 C ATOM 544 OE1 GLN 4 0.572 47.840 11.456 1.00 1.70 O ATOM 545 NE2 GLN 4 0.038 48.354 13.594 1.00 1.85 N ATOM 546 N GLY 5 3.419 44.365 10.427 1.00 1.85 N ATOM 547 CA GLY 5 4.155 43.496 9.509 1.00 2.17 C ATOM 548 C GLY 5 4.681 44.100 8.234 1.00 2.00 C ATOM 549 O GLY 5 5.112 45.261 8.175 1.00 1.70 O ATOM 550 N PRO 6 4.714 43.304 7.139 1.00 1.85 N ATOM 551 CA PRO 6 4.401 41.868 7.019 1.00 2.28 C ATOM 552 C PRO 6 5.099 40.963 8.002 1.00 2.00 C ATOM 553 O PRO 6 6.247 41.203 8.318 1.00 1.70 O ATOM 554 CB PRO 6 4.614 41.590 5.553 1.00 2.17 C ATOM 555 CG PRO 6 4.292 42.927 4.879 1.00 2.17 C ATOM 556 CD PRO 6 4.911 43.902 5.829 1.00 2.17 C ATOM 557 N TRP 7 4.448 39.911 8.460 1.00 1.85 N ATOM 558 CA TRP 7 4.976 39.064 9.540 1.00 2.28 C ATOM 559 C TRP 7 5.863 37.960 8.984 1.00 2.00 C ATOM 560 O TRP 7 6.985 37.768 9.457 1.00 1.70 O ATOM 561 CB TRP 7 3.825 38.444 10.442 1.00 2.17 C ATOM 562 CG TRP 7 3.013 39.447 11.224 1.00 1.99 C ATOM 563 CD1 TRP 7 3.334 40.752 11.529 1.00 1.99 C ATOM 564 CD2 TRP 7 1.735 39.229 11.845 1.00 1.80 C ATOM 565 NE1 TRP 7 2.324 41.339 12.302 1.00 1.85 N ATOM 566 CE2 TRP 7 1.304 40.448 12.455 1.00 1.80 C ATOM 567 CE3 TRP 7 0.882 38.108 11.915 1.00 1.99 C ATOM 568 CZ2 TRP 7 0.072 40.558 13.106 1.00 1.99 C ATOM 569 CZ3 TRP 7 -0.304 38.187 12.667 1.00 1.99 C ATOM 570 CH2 TRP 7 -0.742 39.405 13.145 1.00 1.99 C ATOM 571 N VAL 8 5.420 37.173 8.000 1.00 1.85 N ATOM 572 CA VAL 8 6.113 35.937 7.600 1.00 2.28 C ATOM 573 C VAL 8 6.076 35.829 6.073 1.00 2.00 C ATOM 574 O VAL 8 5.701 36.715 5.306 1.00 1.70 O ATOM 575 CB VAL 8 5.667 34.653 8.291 1.00 2.28 C ATOM 576 CG1 VAL 8 5.924 34.818 9.806 1.00 2.06 C ATOM 577 CG2 VAL 8 4.197 34.354 7.979 1.00 2.06 C ATOM 578 N GLY 9 6.616 34.709 5.581 1.00 1.85 N ATOM 579 CA GLY 9 6.832 34.457 4.202 1.00 2.17 C ATOM 580 C GLY 9 6.141 33.148 3.830 1.00 2.00 C ATOM 581 O GLY 9 5.261 32.680 4.531 1.00 1.70 O ATOM 582 N SER 10 6.522 32.477 2.714 1.00 1.85 N ATOM 583 CA SER 10 5.868 31.285 2.227 1.00 2.28 C ATOM 584 C SER 10 6.322 30.006 2.922 1.00 2.00 C ATOM 585 O SER 10 5.821 28.933 2.615 1.00 1.70 O ATOM 586 CB SER 10 6.114 31.104 0.705 1.00 2.17 C ATOM 587 OG SER 10 7.511 31.234 0.461 1.00 1.77 O ATOM 588 N SER 11 7.301 30.049 3.858 1.00 1.85 N ATOM 589 CA SER 11 7.610 28.907 4.769 1.00 2.28 C ATOM 590 C SER 11 6.444 28.361 5.543 1.00 2.00 C ATOM 591 O SER 11 6.219 27.172 5.531 1.00 1.70 O ATOM 592 CB SER 11 8.807 29.267 5.725 1.00 2.17 C ATOM 593 OG SER 11 8.547 30.436 6.417 1.00 1.77 O ATOM 594 N TYR 12 5.660 29.233 6.195 1.00 1.85 N ATOM 595 CA TYR 12 4.391 28.825 6.835 1.00 2.28 C ATOM 596 C TYR 12 3.173 28.884 5.956 1.00 2.00 C ATOM 597 O TYR 12 2.443 27.915 5.765 1.00 1.70 O ATOM 598 CB TYR 12 4.105 29.580 8.103 1.00 2.17 C ATOM 599 CG TYR 12 5.312 29.682 8.991 1.00 1.99 C ATOM 600 CD1 TYR 12 5.974 30.902 9.167 1.00 1.99 C ATOM 601 CD2 TYR 12 5.843 28.542 9.594 1.00 1.99 C ATOM 602 CE1 TYR 12 7.160 30.905 9.977 1.00 1.99 C ATOM 603 CE2 TYR 12 6.942 28.579 10.459 1.00 1.99 C ATOM 604 CZ TYR 12 7.623 29.807 10.665 1.00 1.99 C ATOM 605 OH TYR 12 8.772 29.789 11.456 1.00 1.77 O ATOM 606 N VAL 13 2.950 30.018 5.273 1.00 1.85 N ATOM 607 CA VAL 13 1.644 30.374 4.774 1.00 2.28 C ATOM 608 C VAL 13 1.364 29.864 3.389 1.00 2.00 C ATOM 609 O VAL 13 0.242 29.973 2.881 1.00 1.70 O ATOM 610 CB VAL 13 1.434 31.862 4.784 1.00 2.28 C ATOM 611 CG1 VAL 13 1.812 32.429 6.178 1.00 2.06 C ATOM 612 CG2 VAL 13 2.179 32.629 3.653 1.00 2.06 C ATOM 613 N ALA 14 2.361 29.239 2.716 1.00 1.85 N ATOM 614 CA ALA 14 2.123 28.402 1.552 1.00 2.28 C ATOM 615 C ALA 14 1.171 27.235 1.805 1.00 2.00 C ATOM 616 O ALA 14 0.281 26.893 0.982 1.00 1.70 O ATOM 617 CB ALA 14 3.471 27.882 0.938 1.00 2.06 C ATOM 618 N GLU 15 1.320 26.592 2.999 1.00 1.85 N ATOM 619 CA GLU 15 0.434 25.526 3.490 1.00 2.28 C ATOM 620 C GLU 15 -0.885 26.041 4.098 1.00 2.00 C ATOM 621 O GLU 15 -1.950 25.468 3.855 1.00 1.70 O ATOM 622 CB GLU 15 1.182 24.710 4.549 1.00 2.17 C ATOM 623 CG GLU 15 2.488 24.129 3.992 1.00 2.17 C ATOM 624 CD GLU 15 3.049 23.066 4.930 1.00 2.00 C ATOM 625 OE1 GLU 15 2.342 22.096 5.246 1.00 1.70 O ATOM 626 OE2 GLU 15 4.272 23.212 5.299 1.00 1.70 O ATOM 627 N THR 16 -0.824 27.082 4.914 1.00 1.85 N ATOM 628 CA THR 16 -1.927 27.462 5.847 1.00 2.28 C ATOM 629 C THR 16 -2.500 28.857 5.762 1.00 2.00 C ATOM 630 O THR 16 -3.271 29.207 6.657 1.00 1.70 O ATOM 631 CB THR 16 -1.425 27.262 7.288 1.00 2.28 C ATOM 632 OG1 THR 16 -0.163 27.918 7.462 1.00 1.77 O ATOM 633 CG2 THR 16 -1.248 25.740 7.577 1.00 2.06 C ATOM 634 N GLY 17 -2.198 29.669 4.697 1.00 1.85 N ATOM 635 CA GLY 17 -2.878 30.965 4.407 1.00 2.17 C ATOM 636 C GLY 17 -3.456 31.779 5.545 1.00 2.00 C ATOM 637 O GLY 17 -2.770 32.174 6.487 1.00 1.70 O ATOM 638 N GLN 18 -4.780 32.018 5.518 1.00 1.85 N ATOM 639 CA GLN 18 -5.508 32.720 6.552 1.00 2.28 C ATOM 640 C GLN 18 -5.546 32.077 7.943 1.00 2.00 C ATOM 641 O GLN 18 -5.706 32.778 8.953 1.00 1.70 O ATOM 642 CB GLN 18 -6.951 33.098 6.170 1.00 2.17 C ATOM 643 CG GLN 18 -7.054 34.244 5.129 1.00 2.17 C ATOM 644 CD GLN 18 -8.506 34.674 4.826 1.00 2.00 C ATOM 645 OE1 GLN 18 -8.941 35.859 4.971 1.00 1.70 O ATOM 646 NE2 GLN 18 -9.295 33.695 4.342 1.00 1.85 N ATOM 647 N ASN 19 -5.420 30.743 7.963 1.00 1.85 N ATOM 648 CA ASN 19 -5.262 29.968 9.194 1.00 2.28 C ATOM 649 C ASN 19 -4.002 30.347 9.945 1.00 2.00 C ATOM 650 O ASN 19 -3.996 30.531 11.161 1.00 1.70 O ATOM 651 CB ASN 19 -5.358 28.424 8.995 1.00 2.17 C ATOM 652 CG ASN 19 -6.702 28.103 8.364 1.00 2.00 C ATOM 653 OD1 ASN 19 -7.737 28.197 8.992 1.00 1.70 O ATOM 654 ND2 ASN 19 -6.723 27.665 7.126 1.00 1.85 N ATOM 655 N TRP 20 -2.868 30.537 9.231 1.00 1.85 N ATOM 656 CA TRP 20 -1.709 31.093 9.867 1.00 2.28 C ATOM 657 C TRP 20 -1.903 32.506 10.466 1.00 2.00 C ATOM 658 O TRP 20 -1.491 32.723 11.587 1.00 1.70 O ATOM 659 CB TRP 20 -0.537 31.095 8.859 1.00 2.17 C ATOM 660 CG TRP 20 0.797 31.339 9.563 1.00 1.99 C ATOM 661 CD1 TRP 20 1.528 30.503 10.345 1.00 1.99 C ATOM 662 CD2 TRP 20 1.303 32.655 9.823 1.00 1.80 C ATOM 663 NE1 TRP 20 2.550 31.167 10.980 1.00 1.85 N ATOM 664 CE2 TRP 20 2.381 32.500 10.740 1.00 1.80 C ATOM 665 CE3 TRP 20 0.899 33.915 9.340 1.00 1.99 C ATOM 666 CZ2 TRP 20 3.022 33.644 11.249 1.00 1.99 C ATOM 667 CZ3 TRP 20 1.546 35.050 9.858 1.00 1.99 C ATOM 668 CH2 TRP 20 2.566 34.893 10.817 1.00 1.99 C ATOM 669 N ALA 21 -2.581 33.438 9.785 1.00 1.85 N ATOM 670 CA ALA 21 -2.855 34.734 10.359 1.00 2.28 C ATOM 671 C ALA 21 -3.679 34.659 11.594 1.00 2.00 C ATOM 672 O ALA 21 -3.380 35.395 12.529 1.00 1.70 O ATOM 673 CB ALA 21 -3.648 35.632 9.407 1.00 2.06 C ATOM 674 N SER 22 -4.703 33.785 11.622 1.00 1.85 N ATOM 675 CA SER 22 -5.603 33.608 12.747 1.00 2.28 C ATOM 676 C SER 22 -4.896 33.069 13.951 1.00 2.00 C ATOM 677 O SER 22 -4.973 33.617 15.054 1.00 1.70 O ATOM 678 CB SER 22 -6.786 32.627 12.425 1.00 2.17 C ATOM 679 OG SER 22 -7.423 32.977 11.182 1.00 1.77 O ATOM 680 N LEU 23 -4.120 32.006 13.763 1.00 1.85 N ATOM 681 CA LEU 23 -3.278 31.450 14.843 1.00 2.28 C ATOM 682 C LEU 23 -2.127 32.360 15.298 1.00 2.00 C ATOM 683 O LEU 23 -1.924 32.592 16.494 1.00 1.70 O ATOM 684 CB LEU 23 -2.686 30.098 14.418 1.00 2.17 C ATOM 685 CG LEU 23 -3.661 28.936 14.267 1.00 2.28 C ATOM 686 CD1 LEU 23 -2.953 27.726 13.676 1.00 2.06 C ATOM 687 CD2 LEU 23 -4.338 28.560 15.605 1.00 2.06 C ATOM 688 N ALA 24 -1.408 32.979 14.361 1.00 1.85 N ATOM 689 CA ALA 24 -0.383 33.931 14.627 1.00 2.28 C ATOM 690 C ALA 24 -0.825 35.173 15.355 1.00 2.00 C ATOM 691 O ALA 24 -0.137 35.606 16.276 1.00 1.70 O ATOM 692 CB ALA 24 0.310 34.363 13.384 1.00 2.06 C ATOM 693 N ALA 25 -2.006 35.800 15.056 1.00 1.85 N ATOM 694 CA ALA 25 -2.539 36.856 15.877 1.00 2.28 C ATOM 695 C ALA 25 -2.752 36.486 17.341 1.00 2.00 C ATOM 696 O ALA 25 -2.469 37.254 18.276 1.00 1.70 O ATOM 697 CB ALA 25 -3.801 37.459 15.161 1.00 2.06 C ATOM 698 N ASN 26 -3.291 35.293 17.569 1.00 1.85 N ATOM 699 CA ASN 26 -3.400 34.828 18.965 1.00 2.28 C ATOM 700 C ASN 26 -2.064 34.500 19.632 1.00 2.00 C ATOM 701 O ASN 26 -1.772 35.027 20.718 1.00 1.70 O ATOM 702 CB ASN 26 -4.301 33.572 18.963 1.00 2.17 C ATOM 703 CG ASN 26 -5.738 34.053 18.861 1.00 2.00 C ATOM 704 OD1 ASN 26 -6.546 34.052 19.786 1.00 1.70 O ATOM 705 ND2 ASN 26 -6.223 34.247 17.602 1.00 1.85 N ATOM 706 N GLU 27 -1.197 33.702 18.987 1.00 1.85 N ATOM 707 CA GLU 27 0.130 33.355 19.503 1.00 2.28 C ATOM 708 C GLU 27 1.053 34.511 19.771 1.00 2.00 C ATOM 709 O GLU 27 1.773 34.514 20.773 1.00 1.70 O ATOM 710 CB GLU 27 0.852 32.352 18.517 1.00 2.17 C ATOM 711 CG GLU 27 0.152 30.956 18.425 1.00 2.17 C ATOM 712 CD GLU 27 0.964 29.962 17.605 1.00 2.00 C ATOM 713 OE1 GLU 27 2.091 30.310 17.207 1.00 1.70 O ATOM 714 OE2 GLU 27 0.534 28.757 17.549 1.00 1.70 O ATOM 715 N LEU 28 1.032 35.543 18.870 1.00 1.85 N ATOM 716 CA LEU 28 1.804 36.760 19.007 1.00 2.28 C ATOM 717 C LEU 28 1.076 37.782 19.869 1.00 2.00 C ATOM 718 O LEU 28 1.624 38.848 20.156 1.00 1.70 O ATOM 719 CB LEU 28 2.076 37.351 17.629 1.00 2.17 C ATOM 720 CG LEU 28 2.915 36.519 16.688 1.00 2.28 C ATOM 721 CD1 LEU 28 2.854 37.132 15.279 1.00 2.06 C ATOM 722 CD2 LEU 28 4.357 36.390 17.204 1.00 2.06 C ATOM 723 N ARG 29 -0.152 37.487 20.386 1.00 1.85 N ATOM 724 CA ARG 29 -0.864 38.325 21.379 1.00 2.28 C ATOM 725 C ARG 29 -1.133 39.742 20.895 1.00 2.00 C ATOM 726 O ARG 29 -0.826 40.718 21.538 1.00 1.70 O ATOM 727 CB ARG 29 -0.242 38.312 22.811 1.00 2.17 C ATOM 728 CG ARG 29 -0.173 36.901 23.416 1.00 2.17 C ATOM 729 CD ARG 29 0.139 36.865 24.924 1.00 2.17 C ATOM 730 NE ARG 29 0.132 35.465 25.366 1.00 1.85 N ATOM 731 CZ ARG 29 0.566 35.029 26.545 1.00 2.00 C ATOM 732 NH1 ARG 29 1.187 35.802 27.369 1.00 1.85 N ATOM 733 NH2 ARG 29 0.356 33.763 26.884 1.00 1.85 N ATOM 734 N VAL 30 -1.641 39.814 19.656 1.00 1.85 N ATOM 735 CA VAL 30 -1.728 41.038 18.905 1.00 2.28 C ATOM 736 C VAL 30 -3.169 41.327 18.467 1.00 2.00 C ATOM 737 O VAL 30 -3.917 40.474 18.003 1.00 1.70 O ATOM 738 CB VAL 30 -0.741 41.126 17.696 1.00 2.28 C ATOM 739 CG1 VAL 30 -0.886 39.897 16.769 1.00 2.06 C ATOM 740 CG2 VAL 30 -0.967 42.370 16.872 1.00 2.06 C ATOM 741 N THR 31 -3.604 42.583 18.611 1.00 1.85 N ATOM 742 CA THR 31 -4.895 43.064 18.183 1.00 2.28 C ATOM 743 C THR 31 -4.653 44.174 17.220 1.00 2.00 C ATOM 744 O THR 31 -3.991 45.190 17.506 1.00 1.70 O ATOM 745 CB THR 31 -5.716 43.642 19.270 1.00 2.28 C ATOM 746 OG1 THR 31 -5.842 42.752 20.401 1.00 1.77 O ATOM 747 CG2 THR 31 -7.173 43.941 18.792 1.00 2.06 C ATOM 748 N GLU 32 -5.200 44.021 16.014 1.00 1.85 N ATOM 749 CA GLU 32 -5.070 44.928 14.921 1.00 2.28 C ATOM 750 C GLU 32 -6.205 44.612 13.972 1.00 2.00 C ATOM 751 O GLU 32 -6.805 43.558 14.067 1.00 1.70 O ATOM 752 CB GLU 32 -3.647 44.814 14.271 1.00 2.17 C ATOM 753 CG GLU 32 -3.281 45.847 13.187 1.00 2.17 C ATOM 754 CD GLU 32 -3.616 47.329 13.593 1.00 2.00 C ATOM 755 OE1 GLU 32 -4.795 47.709 13.446 1.00 1.70 O ATOM 756 OE2 GLU 32 -2.705 48.057 14.007 1.00 1.70 O ATOM 757 N ARG 33 -6.555 45.541 13.050 1.00 1.85 N ATOM 758 CA ARG 33 -7.651 45.343 12.146 1.00 2.28 C ATOM 759 C ARG 33 -7.456 44.119 11.255 1.00 2.00 C ATOM 760 O ARG 33 -6.342 43.933 10.741 1.00 1.70 O ATOM 761 CB ARG 33 -7.820 46.611 11.271 1.00 2.17 C ATOM 762 CG ARG 33 -8.440 47.731 12.190 1.00 2.17 C ATOM 763 CD ARG 33 -8.476 49.137 11.533 1.00 2.17 C ATOM 764 NE ARG 33 -9.174 50.126 12.441 1.00 1.85 N ATOM 765 CZ ARG 33 -10.498 50.255 12.503 1.00 2.00 C ATOM 766 NH1 ARG 33 -11.323 49.542 11.735 1.00 1.85 N ATOM 767 NH2 ARG 33 -11.047 51.128 13.333 1.00 1.85 N ATOM 768 N PRO 34 -8.486 43.215 10.970 1.00 1.85 N ATOM 769 CA PRO 34 -8.206 41.916 10.380 1.00 2.28 C ATOM 770 C PRO 34 -7.679 41.954 8.973 1.00 2.00 C ATOM 771 O PRO 34 -7.061 40.987 8.536 1.00 1.70 O ATOM 772 CB PRO 34 -9.614 41.232 10.371 1.00 2.17 C ATOM 773 CG PRO 34 -10.249 41.777 11.660 1.00 2.17 C ATOM 774 CD PRO 34 -9.778 43.242 11.692 1.00 2.17 C ATOM 775 N PHE 35 -7.891 43.072 8.257 1.00 1.85 N ATOM 776 CA PHE 35 -7.309 43.338 6.954 1.00 2.28 C ATOM 777 C PHE 35 -5.774 43.321 6.914 1.00 2.00 C ATOM 778 O PHE 35 -5.111 42.755 6.065 1.00 1.70 O ATOM 779 CB PHE 35 -7.830 44.691 6.420 1.00 2.17 C ATOM 780 CG PHE 35 -9.350 44.966 6.530 1.00 1.99 C ATOM 781 CD1 PHE 35 -9.768 46.324 6.397 1.00 1.99 C ATOM 782 CD2 PHE 35 -10.317 43.965 6.639 1.00 1.99 C ATOM 783 CE1 PHE 35 -11.155 46.610 6.334 1.00 1.99 C ATOM 784 CE2 PHE 35 -11.691 44.257 6.602 1.00 1.99 C ATOM 785 CZ PHE 35 -12.083 45.543 6.458 1.00 1.99 C ATOM 786 N TRP 36 -5.170 43.929 7.952 1.00 1.85 N ATOM 787 CA TRP 36 -3.691 44.032 8.135 1.00 2.28 C ATOM 788 C TRP 36 -3.164 42.777 8.671 1.00 2.00 C ATOM 789 O TRP 36 -2.233 42.272 8.075 1.00 1.70 O ATOM 790 CB TRP 36 -3.273 45.253 8.929 1.00 2.17 C ATOM 791 CG TRP 36 -3.378 46.587 8.116 1.00 1.99 C ATOM 792 CD1 TRP 36 -2.445 47.211 7.364 1.00 1.99 C ATOM 793 CD2 TRP 36 -4.576 47.340 7.969 1.00 1.80 C ATOM 794 NE1 TRP 36 -2.976 48.301 6.752 1.00 1.85 N ATOM 795 CE2 TRP 36 -4.293 48.405 7.077 1.00 1.80 C ATOM 796 CE3 TRP 36 -5.842 47.141 8.464 1.00 1.99 C ATOM 797 CZ2 TRP 36 -5.268 49.254 6.619 1.00 1.99 C ATOM 798 CZ3 TRP 36 -6.838 48.036 8.025 1.00 1.99 C ATOM 799 CH2 TRP 36 -6.582 49.055 7.131 1.00 1.99 C ATOM 800 N ILE 37 -3.807 42.193 9.705 1.00 1.85 N ATOM 801 CA ILE 37 -3.505 40.826 10.130 1.00 2.28 C ATOM 802 C ILE 37 -3.497 39.803 8.974 1.00 2.00 C ATOM 803 O ILE 37 -2.569 39.040 8.741 1.00 1.70 O ATOM 804 CB ILE 37 -4.421 40.404 11.264 1.00 2.28 C ATOM 805 CG1 ILE 37 -4.184 41.392 12.442 1.00 2.17 C ATOM 806 CG2 ILE 37 -4.250 38.917 11.666 1.00 2.06 C ATOM 807 CD1 ILE 37 -4.801 40.999 13.800 1.00 2.06 C ATOM 808 N SER 38 -4.516 39.793 8.087 1.00 1.85 N ATOM 809 CA SER 38 -4.523 38.968 6.922 1.00 2.28 C ATOM 810 C SER 38 -3.631 39.411 5.750 1.00 2.00 C ATOM 811 O SER 38 -3.296 38.606 4.911 1.00 1.70 O ATOM 812 CB SER 38 -5.943 38.779 6.314 1.00 2.17 C ATOM 813 OG SER 38 -6.852 38.429 7.354 1.00 1.77 O ATOM 814 N SER 39 -3.167 40.684 5.725 1.00 1.85 N ATOM 815 CA SER 39 -2.152 41.051 4.754 1.00 2.28 C ATOM 816 C SER 39 -0.766 40.644 5.176 1.00 2.00 C ATOM 817 O SER 39 0.136 40.403 4.372 1.00 1.70 O ATOM 818 CB SER 39 -2.205 42.600 4.506 1.00 2.17 C ATOM 819 OG SER 39 -3.441 42.920 3.903 1.00 1.77 O ATOM 820 N PHE 40 -0.539 40.464 6.528 1.00 1.85 N ATOM 821 CA PHE 40 0.785 40.209 7.078 1.00 2.28 C ATOM 822 C PHE 40 1.080 38.746 7.059 1.00 2.00 C ATOM 823 O PHE 40 2.146 38.339 7.521 1.00 1.70 O ATOM 824 CB PHE 40 0.839 40.697 8.572 1.00 2.17 C ATOM 825 CG PHE 40 0.723 42.184 8.777 1.00 1.99 C ATOM 826 CD1 PHE 40 1.068 43.175 7.801 1.00 1.99 C ATOM 827 CD2 PHE 40 0.247 42.672 10.019 1.00 1.99 C ATOM 828 CE1 PHE 40 0.913 44.552 8.065 1.00 1.99 C ATOM 829 CE2 PHE 40 0.165 44.022 10.308 1.00 1.99 C ATOM 830 CZ PHE 40 0.459 44.975 9.314 1.00 1.99 C ATOM 831 N ILE 41 0.202 37.933 6.404 1.00 1.85 N ATOM 832 CA ILE 41 0.390 36.548 6.020 1.00 2.28 C ATOM 833 C ILE 41 1.653 36.358 5.225 1.00 2.00 C ATOM 834 O ILE 41 2.464 35.480 5.499 1.00 1.70 O ATOM 835 CB ILE 41 -0.789 36.073 5.219 1.00 2.28 C ATOM 836 CG1 ILE 41 -2.004 35.888 6.131 1.00 2.17 C ATOM 837 CG2 ILE 41 -0.501 34.774 4.408 1.00 2.06 C ATOM 838 CD1 ILE 41 -3.282 35.544 5.364 1.00 2.06 C ATOM 839 N GLY 42 1.874 37.234 4.223 1.00 1.85 N ATOM 840 CA GLY 42 2.943 36.992 3.244 1.00 2.17 C ATOM 841 C GLY 42 3.590 38.235 2.818 1.00 2.00 C ATOM 842 O GLY 42 2.997 39.012 2.107 1.00 1.70 O ATOM 843 N ARG 43 4.860 38.445 3.211 1.00 1.85 N ATOM 844 CA ARG 43 5.707 39.454 2.685 1.00 2.28 C ATOM 845 C ARG 43 5.797 39.526 1.168 1.00 2.00 C ATOM 846 O ARG 43 5.912 40.642 0.631 1.00 1.70 O ATOM 847 CB ARG 43 7.121 39.317 3.281 1.00 2.17 C ATOM 848 CG ARG 43 8.083 40.483 2.954 1.00 2.17 C ATOM 849 CD ARG 43 9.412 40.283 3.660 1.00 2.17 C ATOM 850 NE ARG 43 10.233 41.511 3.377 1.00 1.85 N ATOM 851 CZ ARG 43 11.425 41.731 3.910 1.00 2.00 C ATOM 852 NH1 ARG 43 11.973 40.928 4.810 1.00 1.85 N ATOM 853 NH2 ARG 43 12.112 42.785 3.468 1.00 1.85 N ATOM 854 N SER 44 5.684 38.418 0.517 1.00 1.85 N ATOM 855 CA SER 44 5.710 38.392 -0.947 1.00 2.28 C ATOM 856 C SER 44 4.314 38.371 -1.610 1.00 2.00 C ATOM 857 O SER 44 4.201 38.078 -2.797 1.00 1.70 O ATOM 858 CB SER 44 6.442 37.125 -1.477 1.00 2.17 C ATOM 859 OG SER 44 5.978 35.919 -0.834 1.00 1.77 O ATOM 860 N LYS 45 3.226 38.732 -0.871 1.00 1.85 N ATOM 861 CA LYS 45 1.861 38.873 -1.380 1.00 2.28 C ATOM 862 C LYS 45 1.434 40.322 -1.613 1.00 2.00 C ATOM 863 O LYS 45 1.957 41.243 -1.026 1.00 1.70 O ATOM 864 CB LYS 45 0.818 38.233 -0.419 1.00 2.17 C ATOM 865 CG LYS 45 1.017 36.688 -0.265 1.00 2.17 C ATOM 866 CD LYS 45 -0.042 36.039 0.629 1.00 2.17 C ATOM 867 CE LYS 45 0.017 34.518 0.554 1.00 2.17 C ATOM 868 NZ LYS 45 -0.362 34.025 -0.773 1.00 1.85 N TER END