####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS344_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.87 8.08 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.86 9.13 LCS_AVERAGE: 34.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.97 8.19 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 3 3 3 6 6 7 11 12 13 15 17 17 19 22 24 28 31 33 38 38 LCS_GDT V 3 V 3 3 7 38 3 3 5 6 8 9 12 16 18 21 25 28 31 35 36 36 37 38 38 38 LCS_GDT Q 4 Q 4 5 7 38 3 4 5 6 8 9 13 16 23 25 27 28 33 35 36 36 37 38 38 38 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 15 19 24 26 27 31 33 33 35 36 36 37 38 38 38 LCS_GDT P 6 P 6 5 13 38 3 4 5 5 9 12 18 24 26 27 31 33 33 35 36 36 37 38 38 38 LCS_GDT W 7 W 7 12 17 38 3 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT V 8 V 8 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT G 9 G 9 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT S 10 S 10 12 17 38 7 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT S 11 S 11 12 17 38 7 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT Y 12 Y 12 12 17 38 7 11 12 13 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT V 13 V 13 12 17 38 7 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT A 14 A 14 12 17 38 7 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT E 15 E 15 12 17 38 3 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT T 16 T 16 12 17 38 7 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT G 17 G 17 12 17 38 7 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT Q 18 Q 18 12 17 38 3 3 12 13 14 17 19 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT E 27 E 27 13 19 38 7 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT L 28 L 28 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT V 30 V 30 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT T 31 T 31 13 19 38 3 8 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT E 32 E 32 6 19 38 4 6 6 10 13 17 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT R 33 R 33 6 19 38 4 8 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT P 34 P 34 6 19 38 4 8 8 13 17 18 20 24 26 29 30 33 33 35 36 36 37 38 38 38 LCS_GDT F 35 F 35 6 19 38 4 6 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 18 20 24 26 27 30 33 33 35 36 36 37 38 38 38 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 16 18 21 24 26 27 31 33 33 35 36 36 37 38 38 38 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 14 20 22 24 27 29 30 30 34 36 36 37 38 38 38 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 11 17 21 23 27 29 30 30 31 32 36 37 38 38 38 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 11 14 20 23 27 29 30 30 31 32 34 37 38 38 38 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 11 14 17 20 24 27 28 30 30 31 32 32 32 34 37 LCS_GDT G 42 G 42 4 9 34 3 4 4 6 9 9 11 13 17 18 22 24 27 28 31 32 32 32 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 9 11 13 17 18 20 24 25 27 30 32 32 32 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 5 9 9 11 12 15 15 16 20 22 26 27 28 32 32 33 33 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 7 7 9 10 13 13 14 15 17 19 21 22 25 27 27 LCS_AVERAGE LCS_A: 46.59 ( 20.87 34.56 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 38 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 40.91 47.73 54.55 59.09 65.91 70.45 75.00 75.00 79.55 81.82 81.82 84.09 86.36 86.36 86.36 GDT RMS_LOCAL 0.29 0.56 0.56 1.34 1.46 1.60 2.33 2.63 2.86 3.41 3.69 3.84 3.84 4.20 4.41 4.41 4.66 4.87 4.87 4.87 GDT RMS_ALL_AT 7.99 8.04 8.04 8.99 9.36 9.17 8.00 8.21 8.20 8.70 8.49 8.49 8.49 8.47 8.32 8.32 8.18 8.08 8.08 8.08 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.722 0 0.587 0.575 17.362 0.000 0.000 - LGA V 3 V 3 10.956 0 0.113 1.010 12.047 0.000 0.000 8.166 LGA Q 4 Q 4 12.401 0 0.617 1.087 15.669 0.000 0.000 15.669 LGA G 5 G 5 10.488 0 0.037 0.037 10.908 0.000 0.000 - LGA P 6 P 6 9.047 0 0.127 0.420 12.207 0.000 0.000 11.777 LGA W 7 W 7 9.902 0 0.472 1.163 21.125 0.000 0.000 21.125 LGA V 8 V 8 8.666 0 0.083 0.108 9.911 0.000 0.000 8.726 LGA G 9 G 9 7.829 0 0.088 0.088 8.558 0.000 0.000 - LGA S 10 S 10 7.669 0 0.108 0.673 9.193 0.000 0.000 7.512 LGA S 11 S 11 4.815 0 0.038 0.681 6.026 10.000 6.970 4.816 LGA Y 12 Y 12 2.852 0 0.083 1.048 8.133 31.818 12.727 8.133 LGA V 13 V 13 3.485 0 0.093 1.026 7.625 13.182 10.390 7.625 LGA A 14 A 14 4.397 0 0.042 0.040 5.054 6.818 6.545 - LGA E 15 E 15 3.132 0 0.063 1.219 5.751 15.455 21.212 2.987 LGA T 16 T 16 4.119 0 0.148 1.047 6.191 5.909 11.688 2.014 LGA G 17 G 17 6.238 0 0.696 0.696 6.238 0.000 0.000 - LGA Q 18 Q 18 5.483 0 0.056 1.338 12.010 16.364 7.273 11.915 LGA N 19 N 19 1.750 0 0.656 1.398 7.784 47.727 24.545 7.784 LGA W 20 W 20 1.557 0 0.079 0.993 7.385 54.545 37.792 6.878 LGA A 21 A 21 2.417 0 0.051 0.075 3.161 38.182 34.182 - LGA S 22 S 22 2.289 0 0.028 0.080 2.410 44.545 44.545 1.802 LGA L 23 L 23 0.884 0 0.037 0.082 1.770 77.727 74.091 1.152 LGA A 24 A 24 1.532 0 0.029 0.049 2.062 54.545 51.273 - LGA A 25 A 25 2.206 0 0.046 0.047 2.385 41.364 40.727 - LGA N 26 N 26 1.716 0 0.066 0.747 3.741 54.545 47.955 3.741 LGA E 27 E 27 1.180 0 0.087 0.712 2.326 65.455 54.747 2.134 LGA L 28 L 28 1.099 0 0.115 0.186 1.468 65.455 65.455 1.467 LGA R 29 R 29 1.181 0 0.097 1.341 7.871 65.455 38.512 7.871 LGA V 30 V 30 1.341 0 0.224 1.158 3.615 65.909 53.766 3.615 LGA T 31 T 31 1.423 0 0.684 0.598 4.250 52.273 34.026 4.109 LGA E 32 E 32 3.892 0 0.591 1.284 11.314 25.909 11.515 11.314 LGA R 33 R 33 2.452 0 0.034 1.446 11.887 25.455 10.909 11.887 LGA P 34 P 34 3.695 0 0.098 0.445 6.911 13.636 8.052 6.911 LGA F 35 F 35 2.545 0 0.096 1.309 3.567 32.727 28.099 3.171 LGA W 36 W 36 3.778 0 0.637 1.281 14.468 12.727 3.636 14.151 LGA I 37 I 37 3.026 0 0.110 0.983 5.695 11.818 12.955 3.069 LGA S 38 S 38 6.778 0 0.175 0.625 9.036 0.455 0.303 7.572 LGA S 39 S 39 7.455 0 0.135 0.683 10.419 0.000 0.000 6.673 LGA F 40 F 40 7.823 0 0.102 1.096 11.038 0.000 0.000 9.742 LGA I 41 I 41 11.854 0 0.535 0.593 14.925 0.000 0.000 12.012 LGA G 42 G 42 16.468 0 0.071 0.071 18.989 0.000 0.000 - LGA R 43 R 43 16.494 0 0.686 0.530 18.802 0.000 0.000 18.802 LGA S 44 S 44 18.695 0 0.677 0.821 21.845 0.000 0.000 17.436 LGA K 45 K 45 22.490 0 0.106 0.310 25.030 0.000 0.000 21.038 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.596 7.768 8.672 21.591 17.134 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.63 49.432 46.887 0.878 LGA_LOCAL RMSD: 2.633 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.211 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.596 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.578624 * X + -0.657559 * Y + 0.482504 * Z + 1.044464 Y_new = -0.814410 * X + -0.433950 * Y + 0.385259 * Z + 27.529860 Z_new = -0.043948 * X + -0.615876 * Y + -0.786616 * Z + -15.059110 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.953070 0.043962 -2.477339 [DEG: -54.6069 2.5188 -141.9411 ] ZXZ: 2.244596 2.476106 -3.070355 [DEG: 128.6059 141.8704 -175.9184 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS344_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS344_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.63 46.887 7.60 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS344_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 525 N ALA 2 -2.411 45.506 12.361 1.00 1.85 N ATOM 526 CA ALA 2 -2.654 44.810 13.616 1.00 2.28 C ATOM 527 C ALA 2 -1.386 44.503 14.386 1.00 2.00 C ATOM 528 O ALA 2 -1.249 44.734 15.586 1.00 1.70 O ATOM 529 CB ALA 2 -3.231 43.409 13.321 1.00 2.06 C ATOM 530 N VAL 3 -0.394 44.113 13.582 1.00 1.85 N ATOM 531 CA VAL 3 1.006 43.926 13.889 1.00 2.28 C ATOM 532 C VAL 3 1.893 45.175 13.753 1.00 2.00 C ATOM 533 O VAL 3 1.478 46.167 13.145 1.00 1.70 O ATOM 534 CB VAL 3 1.635 42.823 13.052 1.00 2.28 C ATOM 535 CG1 VAL 3 1.016 41.441 13.309 1.00 2.06 C ATOM 536 CG2 VAL 3 1.366 43.118 11.560 1.00 2.06 C ATOM 537 N GLN 4 3.129 45.078 14.231 1.00 1.85 N ATOM 538 CA GLN 4 4.151 46.128 14.128 1.00 2.28 C ATOM 539 C GLN 4 4.509 46.367 12.700 1.00 2.00 C ATOM 540 O GLN 4 4.700 47.482 12.255 1.00 1.70 O ATOM 541 CB GLN 4 5.354 45.804 15.030 1.00 2.17 C ATOM 542 CG GLN 4 6.238 47.079 15.156 1.00 2.17 C ATOM 543 CD GLN 4 7.254 47.020 16.295 1.00 2.00 C ATOM 544 OE1 GLN 4 7.377 46.065 17.049 1.00 1.70 O ATOM 545 NE2 GLN 4 8.031 48.133 16.362 1.00 1.85 N ATOM 546 N GLY 5 4.566 45.292 11.892 1.00 1.85 N ATOM 547 CA GLY 5 4.566 45.441 10.452 1.00 2.17 C ATOM 548 C GLY 5 4.541 44.100 9.771 1.00 2.00 C ATOM 549 O GLY 5 4.603 43.074 10.445 1.00 1.70 O ATOM 550 N PRO 6 4.473 44.067 8.437 1.00 1.85 N ATOM 551 CA PRO 6 4.379 42.855 7.610 1.00 2.28 C ATOM 552 C PRO 6 5.519 41.899 7.949 1.00 2.00 C ATOM 553 O PRO 6 5.322 40.675 7.966 1.00 1.70 O ATOM 554 CB PRO 6 4.415 43.333 6.135 1.00 2.17 C ATOM 555 CG PRO 6 3.892 44.774 6.266 1.00 2.17 C ATOM 556 CD PRO 6 4.396 45.276 7.593 1.00 2.17 C ATOM 557 N TRP 7 6.727 42.365 8.317 1.00 1.85 N ATOM 558 CA TRP 7 7.798 41.544 8.867 1.00 2.28 C ATOM 559 C TRP 7 7.473 40.653 10.060 1.00 2.00 C ATOM 560 O TRP 7 7.982 39.540 10.167 1.00 1.70 O ATOM 561 CB TRP 7 9.034 42.432 9.160 1.00 2.17 C ATOM 562 CG TRP 7 8.796 43.462 10.242 1.00 1.99 C ATOM 563 CD1 TRP 7 8.524 44.790 10.091 1.00 1.99 C ATOM 564 CD2 TRP 7 9.079 43.259 11.612 1.00 1.80 C ATOM 565 NE1 TRP 7 8.514 45.393 11.336 1.00 1.85 N ATOM 566 CE2 TRP 7 8.920 44.480 12.277 1.00 1.80 C ATOM 567 CE3 TRP 7 9.507 42.143 12.329 1.00 1.99 C ATOM 568 CZ2 TRP 7 9.242 44.631 13.623 1.00 1.99 C ATOM 569 CZ3 TRP 7 9.853 42.250 13.664 1.00 1.99 C ATOM 570 CH2 TRP 7 9.684 43.476 14.304 1.00 1.99 C ATOM 571 N VAL 8 6.589 41.102 10.984 1.00 1.85 N ATOM 572 CA VAL 8 6.058 40.290 12.041 1.00 2.28 C ATOM 573 C VAL 8 5.201 39.156 11.540 1.00 2.00 C ATOM 574 O VAL 8 5.366 38.005 11.996 1.00 1.70 O ATOM 575 CB VAL 8 5.221 41.141 13.012 1.00 2.28 C ATOM 576 CG1 VAL 8 4.579 40.249 14.093 1.00 2.06 C ATOM 577 CG2 VAL 8 6.121 42.243 13.624 1.00 2.06 C ATOM 578 N GLY 9 4.270 39.436 10.607 1.00 1.85 N ATOM 579 CA GLY 9 3.553 38.383 9.888 1.00 2.17 C ATOM 580 C GLY 9 4.396 37.404 9.148 1.00 2.00 C ATOM 581 O GLY 9 4.199 36.207 9.276 1.00 1.70 O ATOM 582 N SER 10 5.386 37.911 8.367 1.00 1.85 N ATOM 583 CA SER 10 6.272 37.108 7.522 1.00 2.28 C ATOM 584 C SER 10 7.116 36.176 8.341 1.00 2.00 C ATOM 585 O SER 10 7.229 35.000 8.003 1.00 1.70 O ATOM 586 CB SER 10 7.141 37.993 6.567 1.00 2.17 C ATOM 587 OG SER 10 7.997 37.255 5.688 1.00 1.77 O ATOM 588 N SER 11 7.667 36.641 9.453 1.00 1.85 N ATOM 589 CA SER 11 8.387 35.815 10.404 1.00 2.28 C ATOM 590 C SER 11 7.560 34.717 11.031 1.00 2.00 C ATOM 591 O SER 11 8.014 33.610 11.236 1.00 1.70 O ATOM 592 CB SER 11 9.046 36.598 11.580 1.00 2.17 C ATOM 593 OG SER 11 9.847 37.681 11.091 1.00 1.77 O ATOM 594 N TYR 12 6.271 35.024 11.343 1.00 1.85 N ATOM 595 CA TYR 12 5.372 34.033 11.947 1.00 2.28 C ATOM 596 C TYR 12 5.088 32.923 11.016 1.00 2.00 C ATOM 597 O TYR 12 5.169 31.752 11.400 1.00 1.70 O ATOM 598 CB TYR 12 4.072 34.809 12.356 1.00 2.17 C ATOM 599 CG TYR 12 3.101 33.965 13.062 1.00 1.99 C ATOM 600 CD1 TYR 12 3.455 33.397 14.294 1.00 1.99 C ATOM 601 CD2 TYR 12 1.902 33.618 12.455 1.00 1.99 C ATOM 602 CE1 TYR 12 2.608 32.483 14.903 1.00 1.99 C ATOM 603 CE2 TYR 12 1.007 32.731 13.065 1.00 1.99 C ATOM 604 CZ TYR 12 1.408 32.136 14.270 1.00 1.99 C ATOM 605 OH TYR 12 0.574 31.132 14.823 1.00 1.77 O ATOM 606 N VAL 13 4.767 33.272 9.777 1.00 1.85 N ATOM 607 CA VAL 13 4.324 32.290 8.775 1.00 2.28 C ATOM 608 C VAL 13 5.464 31.422 8.197 1.00 2.00 C ATOM 609 O VAL 13 5.275 30.252 7.857 1.00 1.70 O ATOM 610 CB VAL 13 3.483 32.916 7.665 1.00 2.28 C ATOM 611 CG1 VAL 13 4.355 33.846 6.724 1.00 2.06 C ATOM 612 CG2 VAL 13 2.703 31.862 6.818 1.00 2.06 C ATOM 613 N ALA 14 6.694 31.990 8.156 1.00 1.85 N ATOM 614 CA ALA 14 7.955 31.393 7.807 1.00 2.28 C ATOM 615 C ALA 14 8.262 30.218 8.717 1.00 2.00 C ATOM 616 O ALA 14 8.618 29.129 8.216 1.00 1.70 O ATOM 617 CB ALA 14 9.091 32.403 7.920 1.00 2.06 C ATOM 618 N GLU 15 8.138 30.377 10.053 1.00 1.85 N ATOM 619 CA GLU 15 8.190 29.274 10.981 1.00 2.28 C ATOM 620 C GLU 15 6.919 28.450 11.041 1.00 2.00 C ATOM 621 O GLU 15 6.942 27.234 10.947 1.00 1.70 O ATOM 622 CB GLU 15 8.530 29.799 12.401 1.00 2.17 C ATOM 623 CG GLU 15 9.717 30.823 12.432 1.00 2.17 C ATOM 624 CD GLU 15 9.991 31.364 13.820 1.00 2.00 C ATOM 625 OE1 GLU 15 9.253 30.928 14.762 1.00 1.70 O ATOM 626 OE2 GLU 15 10.859 32.240 13.988 1.00 1.70 O ATOM 627 N THR 16 5.717 29.049 11.125 1.00 1.85 N ATOM 628 CA THR 16 4.457 28.353 11.401 1.00 2.28 C ATOM 629 C THR 16 3.908 27.477 10.302 1.00 2.00 C ATOM 630 O THR 16 3.475 26.317 10.477 1.00 1.70 O ATOM 631 CB THR 16 3.289 29.227 11.860 1.00 2.28 C ATOM 632 OG1 THR 16 3.670 30.098 12.876 1.00 1.77 O ATOM 633 CG2 THR 16 2.193 28.398 12.551 1.00 2.06 C ATOM 634 N GLY 17 3.973 28.008 9.070 1.00 1.85 N ATOM 635 CA GLY 17 3.222 27.463 7.959 1.00 2.17 C ATOM 636 C GLY 17 1.805 27.993 8.014 1.00 2.00 C ATOM 637 O GLY 17 1.546 29.011 8.601 1.00 1.70 O ATOM 638 N GLN 18 0.875 27.298 7.327 1.00 1.85 N ATOM 639 CA GLN 18 -0.546 27.605 7.317 1.00 2.28 C ATOM 640 C GLN 18 -1.156 27.796 8.721 1.00 2.00 C ATOM 641 O GLN 18 -0.908 27.009 9.646 1.00 1.70 O ATOM 642 CB GLN 18 -1.332 26.494 6.633 1.00 2.17 C ATOM 643 CG GLN 18 -1.062 26.380 5.101 1.00 2.17 C ATOM 644 CD GLN 18 -1.701 25.162 4.428 1.00 2.00 C ATOM 645 OE1 GLN 18 -1.286 24.795 3.327 1.00 1.70 O ATOM 646 NE2 GLN 18 -2.702 24.479 5.052 1.00 1.85 N ATOM 647 N ASN 19 -1.999 28.828 8.896 1.00 1.85 N ATOM 648 CA ASN 19 -2.577 29.116 10.185 1.00 2.28 C ATOM 649 C ASN 19 -3.834 29.917 9.915 1.00 2.00 C ATOM 650 O ASN 19 -4.045 30.452 8.831 1.00 1.70 O ATOM 651 CB ASN 19 -1.582 29.904 11.174 1.00 2.17 C ATOM 652 CG ASN 19 -1.083 31.194 10.534 1.00 2.00 C ATOM 653 OD1 ASN 19 -1.723 32.239 10.577 1.00 1.70 O ATOM 654 ND2 ASN 19 0.163 31.153 9.997 1.00 1.85 N ATOM 655 N TRP 20 -4.823 29.996 10.852 1.00 1.85 N ATOM 656 CA TRP 20 -5.932 30.909 10.683 1.00 2.28 C ATOM 657 C TRP 20 -5.481 32.294 11.133 1.00 2.00 C ATOM 658 O TRP 20 -4.687 32.438 12.059 1.00 1.70 O ATOM 659 CB TRP 20 -7.222 30.590 11.479 1.00 2.17 C ATOM 660 CG TRP 20 -7.831 29.200 11.129 1.00 1.99 C ATOM 661 CD1 TRP 20 -7.811 28.461 9.981 1.00 1.99 C ATOM 662 CD2 TRP 20 -8.586 28.425 12.069 1.00 1.80 C ATOM 663 NE1 TRP 20 -8.448 27.269 10.148 1.00 1.85 N ATOM 664 CE2 TRP 20 -9.024 27.259 11.406 1.00 1.80 C ATOM 665 CE3 TRP 20 -9.035 28.698 13.377 1.00 1.99 C ATOM 666 CZ2 TRP 20 -9.820 26.310 12.034 1.00 1.99 C ATOM 667 CZ3 TRP 20 -9.896 27.782 13.980 1.00 1.99 C ATOM 668 CH2 TRP 20 -10.230 26.553 13.326 1.00 1.99 C ATOM 669 N ALA 21 -6.078 33.316 10.531 1.00 1.85 N ATOM 670 CA ALA 21 -5.716 34.702 10.831 1.00 2.28 C ATOM 671 C ALA 21 -5.975 35.082 12.306 1.00 2.00 C ATOM 672 O ALA 21 -5.138 35.745 12.936 1.00 1.70 O ATOM 673 CB ALA 21 -6.662 35.580 10.058 1.00 2.06 C ATOM 674 N SER 22 -7.121 34.661 12.884 1.00 1.85 N ATOM 675 CA SER 22 -7.458 34.753 14.283 1.00 2.28 C ATOM 676 C SER 22 -6.454 34.055 15.160 1.00 2.00 C ATOM 677 O SER 22 -6.039 34.601 16.179 1.00 1.70 O ATOM 678 CB SER 22 -8.839 34.102 14.488 1.00 2.17 C ATOM 679 OG SER 22 -8.878 32.815 13.869 1.00 1.77 O ATOM 680 N LEU 23 -5.992 32.866 14.815 1.00 1.85 N ATOM 681 CA LEU 23 -4.982 32.140 15.582 1.00 2.28 C ATOM 682 C LEU 23 -3.635 32.826 15.582 1.00 2.00 C ATOM 683 O LEU 23 -2.962 32.907 16.590 1.00 1.70 O ATOM 684 CB LEU 23 -4.829 30.653 15.092 1.00 2.17 C ATOM 685 CG LEU 23 -6.055 29.753 15.267 1.00 2.28 C ATOM 686 CD1 LEU 23 -5.710 28.413 14.603 1.00 2.06 C ATOM 687 CD2 LEU 23 -6.460 29.619 16.725 1.00 2.06 C ATOM 688 N ALA 24 -3.217 33.338 14.427 1.00 1.85 N ATOM 689 CA ALA 24 -2.001 34.156 14.408 1.00 2.28 C ATOM 690 C ALA 24 -2.094 35.426 15.237 1.00 2.00 C ATOM 691 O ALA 24 -1.144 35.759 15.927 1.00 1.70 O ATOM 692 CB ALA 24 -1.801 34.614 12.990 1.00 2.06 C ATOM 693 N ALA 25 -3.230 36.099 15.223 1.00 1.85 N ATOM 694 CA ALA 25 -3.454 37.270 16.051 1.00 2.28 C ATOM 695 C ALA 25 -3.293 37.094 17.560 1.00 2.00 C ATOM 696 O ALA 25 -2.632 37.885 18.255 1.00 1.70 O ATOM 697 CB ALA 25 -4.810 37.871 15.736 1.00 2.06 C ATOM 698 N ASN 26 -3.875 35.967 18.083 1.00 1.85 N ATOM 699 CA ASN 26 -3.788 35.531 19.475 1.00 2.28 C ATOM 700 C ASN 26 -2.378 35.098 19.838 1.00 2.00 C ATOM 701 O ASN 26 -1.824 35.583 20.834 1.00 1.70 O ATOM 702 CB ASN 26 -4.781 34.374 19.649 1.00 2.17 C ATOM 703 CG ASN 26 -6.175 34.871 19.893 1.00 2.00 C ATOM 704 OD1 ASN 26 -6.659 34.929 21.016 1.00 1.70 O ATOM 705 ND2 ASN 26 -6.867 35.236 18.785 1.00 1.85 N ATOM 706 N GLU 27 -1.705 34.228 18.999 1.00 1.85 N ATOM 707 CA GLU 27 -0.341 33.808 19.267 1.00 2.28 C ATOM 708 C GLU 27 0.675 34.955 19.201 1.00 2.00 C ATOM 709 O GLU 27 1.554 35.047 20.066 1.00 1.70 O ATOM 710 CB GLU 27 0.092 32.615 18.340 1.00 2.17 C ATOM 711 CG GLU 27 1.470 32.032 18.772 1.00 2.17 C ATOM 712 CD GLU 27 1.457 31.399 20.147 1.00 2.00 C ATOM 713 OE1 GLU 27 0.673 30.463 20.423 1.00 1.70 O ATOM 714 OE2 GLU 27 2.286 31.817 21.003 1.00 1.70 O ATOM 715 N LEU 28 0.561 35.888 18.221 1.00 1.85 N ATOM 716 CA LEU 28 1.489 37.014 18.126 1.00 2.28 C ATOM 717 C LEU 28 1.180 38.126 19.153 1.00 2.00 C ATOM 718 O LEU 28 2.004 39.009 19.422 1.00 1.70 O ATOM 719 CB LEU 28 1.422 37.606 16.678 1.00 2.17 C ATOM 720 CG LEU 28 2.007 36.755 15.569 1.00 2.28 C ATOM 721 CD1 LEU 28 1.616 37.312 14.181 1.00 2.06 C ATOM 722 CD2 LEU 28 3.569 36.671 15.752 1.00 2.06 C ATOM 723 N ARG 29 -0.030 38.142 19.798 1.00 1.85 N ATOM 724 CA ARG 29 -0.483 39.160 20.774 1.00 2.28 C ATOM 725 C ARG 29 -0.758 40.504 20.090 1.00 2.00 C ATOM 726 O ARG 29 -0.289 41.553 20.519 1.00 1.70 O ATOM 727 CB ARG 29 0.363 39.320 22.060 1.00 2.17 C ATOM 728 CG ARG 29 0.385 38.141 23.042 1.00 2.17 C ATOM 729 CD ARG 29 1.224 36.976 22.567 1.00 2.17 C ATOM 730 NE ARG 29 1.317 36.010 23.694 1.00 1.85 N ATOM 731 CZ ARG 29 1.730 34.741 23.630 1.00 2.00 C ATOM 732 NH1 ARG 29 2.035 34.140 22.492 1.00 1.85 N ATOM 733 NH2 ARG 29 1.904 34.032 24.734 1.00 1.85 N ATOM 734 N VAL 30 -1.499 40.441 18.971 1.00 1.85 N ATOM 735 CA VAL 30 -1.732 41.531 18.063 1.00 2.28 C ATOM 736 C VAL 30 -3.227 41.617 17.866 1.00 2.00 C ATOM 737 O VAL 30 -3.961 40.715 18.247 1.00 1.70 O ATOM 738 CB VAL 30 -0.960 41.417 16.744 1.00 2.28 C ATOM 739 CG1 VAL 30 0.528 41.420 17.062 1.00 2.06 C ATOM 740 CG2 VAL 30 -1.280 40.175 15.897 1.00 2.06 C ATOM 741 N THR 31 -3.699 42.681 17.220 1.00 1.85 N ATOM 742 CA THR 31 -5.147 42.833 16.953 1.00 2.28 C ATOM 743 C THR 31 -5.571 41.996 15.758 1.00 2.00 C ATOM 744 O THR 31 -4.763 41.294 15.139 1.00 1.70 O ATOM 745 CB THR 31 -5.687 44.261 16.773 1.00 2.28 C ATOM 746 OG1 THR 31 -5.048 44.864 15.637 1.00 1.77 O ATOM 747 CG2 THR 31 -5.315 45.140 17.996 1.00 2.06 C ATOM 748 N GLU 32 -6.839 41.990 15.393 1.00 1.85 N ATOM 749 CA GLU 32 -7.326 41.224 14.251 1.00 2.28 C ATOM 750 C GLU 32 -7.559 42.078 13.028 1.00 2.00 C ATOM 751 O GLU 32 -8.169 41.730 12.003 1.00 1.70 O ATOM 752 CB GLU 32 -8.656 40.557 14.655 1.00 2.17 C ATOM 753 CG GLU 32 -8.466 39.395 15.628 1.00 2.17 C ATOM 754 CD GLU 32 -9.741 38.547 15.719 1.00 2.00 C ATOM 755 OE1 GLU 32 -10.825 39.088 15.892 1.00 1.70 O ATOM 756 OE2 GLU 32 -9.732 37.298 15.457 1.00 1.70 O ATOM 757 N ARG 33 -7.103 43.361 13.058 1.00 1.85 N ATOM 758 CA ARG 33 -7.333 44.292 11.980 1.00 2.28 C ATOM 759 C ARG 33 -6.227 45.272 11.866 1.00 2.00 C ATOM 760 O ARG 33 -5.840 45.854 12.877 1.00 1.70 O ATOM 761 CB ARG 33 -8.711 45.001 12.264 1.00 2.17 C ATOM 762 CG ARG 33 -9.005 46.081 11.191 1.00 2.17 C ATOM 763 CD ARG 33 -10.324 46.760 11.434 1.00 2.17 C ATOM 764 NE ARG 33 -10.289 47.438 12.810 1.00 1.85 N ATOM 765 CZ ARG 33 -11.282 48.238 13.219 1.00 2.00 C ATOM 766 NH1 ARG 33 -12.375 48.329 12.489 1.00 1.85 N ATOM 767 NH2 ARG 33 -11.126 48.915 14.344 1.00 1.85 N ATOM 768 N PRO 34 -5.714 45.573 10.691 1.00 1.85 N ATOM 769 CA PRO 34 -5.709 44.804 9.431 1.00 2.28 C ATOM 770 C PRO 34 -4.830 43.603 9.597 1.00 2.00 C ATOM 771 O PRO 34 -3.817 43.731 10.295 1.00 1.70 O ATOM 772 CB PRO 34 -4.952 45.763 8.465 1.00 2.17 C ATOM 773 CG PRO 34 -4.183 46.638 9.376 1.00 2.17 C ATOM 774 CD PRO 34 -5.062 46.849 10.569 1.00 2.17 C ATOM 775 N PHE 35 -5.164 42.452 9.061 1.00 1.85 N ATOM 776 CA PHE 35 -4.245 41.308 9.175 1.00 2.28 C ATOM 777 C PHE 35 -2.950 41.434 8.379 1.00 2.00 C ATOM 778 O PHE 35 -2.893 41.896 7.257 1.00 1.70 O ATOM 779 CB PHE 35 -4.976 40.031 8.723 1.00 2.17 C ATOM 780 CG PHE 35 -5.960 39.577 9.781 1.00 1.99 C ATOM 781 CD1 PHE 35 -7.292 39.499 9.452 1.00 1.99 C ATOM 782 CD2 PHE 35 -5.499 39.205 11.081 1.00 1.99 C ATOM 783 CE1 PHE 35 -8.200 38.991 10.399 1.00 1.99 C ATOM 784 CE2 PHE 35 -6.417 38.757 12.023 1.00 1.99 C ATOM 785 CZ PHE 35 -7.769 38.618 11.673 1.00 1.99 C ATOM 786 N TRP 36 -1.865 40.871 8.956 1.00 1.85 N ATOM 787 CA TRP 36 -0.552 40.880 8.342 1.00 2.28 C ATOM 788 C TRP 36 -0.543 40.012 7.067 1.00 2.00 C ATOM 789 O TRP 36 0.223 40.219 6.142 1.00 1.70 O ATOM 790 CB TRP 36 0.477 40.315 9.359 1.00 2.17 C ATOM 791 CG TRP 36 0.089 38.945 9.920 1.00 1.99 C ATOM 792 CD1 TRP 36 -0.512 38.709 11.094 1.00 1.99 C ATOM 793 CD2 TRP 36 0.402 37.677 9.305 1.00 1.80 C ATOM 794 NE1 TRP 36 -0.665 37.357 11.260 1.00 1.85 N ATOM 795 CE2 TRP 36 -0.099 36.711 10.203 1.00 1.80 C ATOM 796 CE3 TRP 36 0.981 37.306 8.085 1.00 1.99 C ATOM 797 CZ2 TRP 36 0.022 35.346 9.869 1.00 1.99 C ATOM 798 CZ3 TRP 36 1.031 35.954 7.753 1.00 1.99 C ATOM 799 CH2 TRP 36 0.589 34.964 8.634 1.00 1.99 C ATOM 800 N ILE 37 -1.486 39.062 7.024 1.00 1.85 N ATOM 801 CA ILE 37 -1.781 38.123 5.978 1.00 2.28 C ATOM 802 C ILE 37 -2.050 38.738 4.639 1.00 2.00 C ATOM 803 O ILE 37 -1.518 38.300 3.616 1.00 1.70 O ATOM 804 CB ILE 37 -2.960 37.255 6.379 1.00 2.28 C ATOM 805 CG1 ILE 37 -2.518 36.431 7.632 1.00 2.17 C ATOM 806 CG2 ILE 37 -3.386 36.305 5.209 1.00 2.06 C ATOM 807 CD1 ILE 37 -3.663 35.577 8.136 1.00 2.06 C ATOM 808 N SER 38 -2.805 39.836 4.615 1.00 1.85 N ATOM 809 CA SER 38 -3.134 40.589 3.411 1.00 2.28 C ATOM 810 C SER 38 -1.902 41.146 2.750 1.00 2.00 C ATOM 811 O SER 38 -1.614 40.936 1.577 1.00 1.70 O ATOM 812 CB SER 38 -4.144 41.732 3.645 1.00 2.17 C ATOM 813 OG SER 38 -4.536 42.388 2.424 1.00 1.77 O ATOM 814 N SER 39 -1.042 41.768 3.553 1.00 1.85 N ATOM 815 CA SER 39 0.277 42.201 3.136 1.00 2.28 C ATOM 816 C SER 39 1.263 41.059 2.757 1.00 2.00 C ATOM 817 O SER 39 2.036 41.221 1.821 1.00 1.70 O ATOM 818 CB SER 39 1.006 43.032 4.222 1.00 2.17 C ATOM 819 OG SER 39 0.213 44.145 4.613 1.00 1.77 O ATOM 820 N PHE 40 1.280 39.966 3.538 1.00 1.85 N ATOM 821 CA PHE 40 2.155 38.829 3.338 1.00 2.28 C ATOM 822 C PHE 40 1.853 38.177 2.024 1.00 2.00 C ATOM 823 O PHE 40 2.721 37.871 1.200 1.00 1.70 O ATOM 824 CB PHE 40 2.057 37.774 4.485 1.00 2.17 C ATOM 825 CG PHE 40 2.962 36.618 4.243 1.00 1.99 C ATOM 826 CD1 PHE 40 4.334 36.854 4.284 1.00 1.99 C ATOM 827 CD2 PHE 40 2.436 35.383 3.862 1.00 1.99 C ATOM 828 CE1 PHE 40 5.224 35.830 3.906 1.00 1.99 C ATOM 829 CE2 PHE 40 3.334 34.382 3.487 1.00 1.99 C ATOM 830 CZ PHE 40 4.745 34.579 3.509 1.00 1.99 C ATOM 831 N ILE 41 0.563 37.943 1.731 1.00 1.85 N ATOM 832 CA ILE 41 0.077 37.424 0.479 1.00 2.28 C ATOM 833 C ILE 41 0.404 38.389 -0.654 1.00 2.00 C ATOM 834 O ILE 41 1.141 38.037 -1.560 1.00 1.70 O ATOM 835 CB ILE 41 -1.413 37.015 0.562 1.00 2.28 C ATOM 836 CG1 ILE 41 -1.652 35.761 1.443 1.00 2.17 C ATOM 837 CG2 ILE 41 -2.025 36.721 -0.830 1.00 2.06 C ATOM 838 CD1 ILE 41 -3.137 35.590 1.833 1.00 2.06 C ATOM 839 N GLY 42 0.088 39.668 -0.525 1.00 1.85 N ATOM 840 CA GLY 42 0.453 40.677 -1.542 1.00 2.17 C ATOM 841 C GLY 42 1.909 40.807 -1.862 1.00 2.00 C ATOM 842 O GLY 42 2.261 41.371 -2.897 1.00 1.70 O ATOM 843 N ARG 43 2.807 40.333 -0.981 1.00 1.85 N ATOM 844 CA ARG 43 4.260 40.399 -1.273 1.00 2.28 C ATOM 845 C ARG 43 4.903 39.052 -1.549 1.00 2.00 C ATOM 846 O ARG 43 6.075 39.006 -1.944 1.00 1.70 O ATOM 847 CB ARG 43 4.957 41.044 0.001 1.00 2.17 C ATOM 848 CG ARG 43 4.497 42.471 0.293 1.00 2.17 C ATOM 849 CD ARG 43 5.030 43.112 1.596 1.00 2.17 C ATOM 850 NE ARG 43 6.495 43.453 1.425 1.00 1.85 N ATOM 851 CZ ARG 43 7.004 44.603 0.889 1.00 2.00 C ATOM 852 NH1 ARG 43 6.211 45.525 0.356 1.00 1.85 N ATOM 853 NH2 ARG 43 8.351 44.707 0.859 1.00 1.85 N ATOM 854 N SER 44 4.192 37.903 -1.388 1.00 1.85 N ATOM 855 CA SER 44 4.760 36.560 -1.556 1.00 2.28 C ATOM 856 C SER 44 3.901 35.567 -2.331 1.00 2.00 C ATOM 857 O SER 44 4.438 34.679 -2.964 1.00 1.70 O ATOM 858 CB SER 44 5.126 35.835 -0.277 1.00 2.17 C ATOM 859 OG SER 44 3.965 35.459 0.467 1.00 1.77 O ATOM 860 N LYS 45 2.580 35.758 -2.393 1.00 1.85 N ATOM 861 CA LYS 45 1.757 34.845 -3.147 1.00 2.28 C ATOM 862 C LYS 45 0.803 35.565 -4.036 1.00 2.00 C ATOM 863 O LYS 45 0.034 36.401 -3.531 1.00 1.70 O ATOM 864 CB LYS 45 0.943 33.984 -2.100 1.00 2.17 C ATOM 865 CG LYS 45 -0.079 33.042 -2.705 1.00 2.17 C ATOM 866 CD LYS 45 -0.668 32.063 -1.662 1.00 2.17 C ATOM 867 CE LYS 45 -1.507 31.023 -2.336 1.00 2.17 C ATOM 868 NZ LYS 45 -2.102 30.208 -1.302 1.00 1.85 N TER END