####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS337_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 5 - 16 4.65 45.34 LONGEST_CONTINUOUS_SEGMENT: 12 31 - 42 4.78 51.64 LONGEST_CONTINUOUS_SEGMENT: 12 32 - 43 4.91 53.38 LONGEST_CONTINUOUS_SEGMENT: 12 33 - 44 4.98 53.53 LCS_AVERAGE: 25.93 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 2 - 9 1.92 54.93 LCS_AVERAGE: 13.17 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 16 - 20 0.86 42.70 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 0.64 57.88 LCS_AVERAGE: 8.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 8 11 3 3 5 6 7 8 8 8 9 9 9 9 9 10 10 11 12 12 13 13 LCS_GDT V 3 V 3 4 8 11 3 4 4 4 5 8 8 8 9 9 9 9 9 9 9 11 12 12 13 13 LCS_GDT Q 4 Q 4 4 8 11 3 4 5 6 7 8 8 8 9 9 9 10 10 10 11 11 12 15 16 17 LCS_GDT G 5 G 5 4 8 12 3 4 5 6 7 8 8 8 9 9 10 11 11 11 13 14 14 15 16 17 LCS_GDT P 6 P 6 4 8 12 3 4 5 6 7 8 8 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT W 7 W 7 4 8 12 3 3 5 6 7 8 8 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT V 8 V 8 4 8 12 0 3 5 6 7 8 8 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT G 9 G 9 3 8 12 0 3 5 6 7 8 8 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT S 10 S 10 3 4 12 3 3 3 4 4 7 8 8 9 9 10 11 11 12 13 13 13 14 16 17 LCS_GDT S 11 S 11 3 4 12 3 3 3 4 4 5 6 6 7 9 9 10 11 12 13 14 14 15 16 17 LCS_GDT Y 12 Y 12 3 4 12 3 3 3 4 4 5 6 6 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT V 13 V 13 3 4 12 3 3 3 3 4 5 6 7 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT A 14 A 14 3 3 12 3 3 3 3 5 5 6 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT E 15 E 15 3 6 12 3 3 3 4 5 6 7 8 9 9 10 11 11 12 13 14 14 15 16 17 LCS_GDT T 16 T 16 5 6 12 3 4 5 5 5 6 6 8 9 9 9 11 11 12 13 14 14 15 16 17 LCS_GDT G 17 G 17 5 6 11 3 4 5 5 5 6 7 8 9 9 9 10 11 12 13 14 14 15 16 17 LCS_GDT Q 18 Q 18 5 6 11 3 4 5 5 5 6 7 8 9 9 9 10 11 12 13 14 14 15 16 17 LCS_GDT N 19 N 19 5 6 11 3 4 5 5 5 6 7 8 9 9 9 10 10 10 12 13 14 15 16 17 LCS_GDT W 20 W 20 5 6 11 3 4 5 5 5 6 7 8 9 9 9 10 11 12 13 14 14 15 16 17 LCS_GDT A 21 A 21 3 5 11 3 3 3 4 5 5 7 8 9 9 9 10 10 10 12 12 13 15 16 17 LCS_GDT S 22 S 22 3 5 11 3 3 3 4 5 5 7 8 9 9 9 10 10 10 12 12 14 15 16 17 LCS_GDT L 23 L 23 3 5 11 1 3 3 3 5 5 6 6 7 8 9 10 10 10 11 11 12 13 13 16 LCS_GDT A 24 A 24 3 3 10 1 3 3 3 3 4 5 5 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT A 25 A 25 3 3 10 3 3 3 3 3 4 5 5 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT N 26 N 26 3 3 10 3 3 3 3 3 3 5 5 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT E 27 E 27 3 6 10 3 3 3 4 5 6 8 8 8 8 9 9 9 10 11 11 12 13 13 14 LCS_GDT L 28 L 28 4 7 10 3 3 5 5 5 7 8 8 8 8 8 8 9 10 11 11 11 13 13 14 LCS_GDT R 29 R 29 4 7 10 3 4 5 6 6 7 8 8 8 8 8 8 10 10 11 11 12 13 13 14 LCS_GDT V 30 V 30 4 7 10 3 4 5 6 6 7 8 8 8 8 8 8 10 10 10 10 10 11 12 14 LCS_GDT T 31 T 31 4 7 12 3 4 5 6 6 7 8 8 8 8 8 8 10 10 11 12 12 12 12 12 LCS_GDT E 32 E 32 4 7 12 3 4 5 6 6 7 8 8 8 8 8 10 11 11 11 12 12 13 13 13 LCS_GDT R 33 R 33 4 7 12 3 4 4 6 6 7 8 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT P 34 P 34 4 7 12 4 4 5 6 6 7 8 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT F 35 F 35 4 6 12 4 4 5 5 5 7 7 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT W 36 W 36 4 6 12 4 4 5 5 5 7 7 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT I 37 I 37 4 6 12 4 4 5 5 5 7 7 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT S 38 S 38 3 6 12 0 3 5 5 5 7 7 8 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT S 39 S 39 3 4 12 0 3 3 4 4 4 7 7 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT F 40 F 40 3 4 12 3 3 3 4 4 4 6 7 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT I 41 I 41 5 5 12 3 5 5 5 5 5 6 6 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT G 42 G 42 5 5 12 3 5 5 5 5 5 6 6 9 10 10 10 11 12 12 12 12 13 13 13 LCS_GDT R 43 R 43 5 5 12 3 5 5 5 5 5 6 6 8 8 9 9 10 12 12 12 12 13 13 13 LCS_GDT S 44 S 44 5 5 12 3 5 5 5 5 5 6 6 8 8 9 9 10 12 12 12 12 13 13 13 LCS_GDT K 45 K 45 5 5 10 1 5 5 5 5 5 6 6 8 8 8 8 9 9 10 10 10 10 11 13 LCS_AVERAGE LCS_A: 15.93 ( 8.68 13.17 25.93 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 6 7 8 8 8 9 10 10 11 11 12 13 14 14 15 16 17 GDT PERCENT_AT 9.09 11.36 11.36 13.64 15.91 18.18 18.18 18.18 20.45 22.73 22.73 25.00 25.00 27.27 29.55 31.82 31.82 34.09 36.36 38.64 GDT RMS_LOCAL 0.32 0.64 0.64 1.21 1.51 1.92 1.92 1.92 2.51 3.68 3.68 4.22 4.14 4.98 5.23 5.99 5.86 6.17 6.49 6.80 GDT RMS_ALL_AT 51.02 57.88 57.88 34.68 54.27 54.93 54.93 54.93 55.46 51.54 51.54 45.94 52.66 53.53 44.68 39.36 39.15 39.40 39.16 37.70 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.263 0 0.036 0.050 3.848 59.091 49.455 - LGA V 3 V 3 3.238 0 0.126 1.125 7.611 43.182 24.675 7.611 LGA Q 4 Q 4 2.449 0 0.048 1.122 9.726 31.818 14.141 9.726 LGA G 5 G 5 1.860 0 0.086 0.086 3.199 50.000 50.000 - LGA P 6 P 6 1.020 0 0.037 0.399 2.802 65.909 52.468 2.802 LGA W 7 W 7 0.733 0 0.393 1.098 6.063 82.273 44.156 3.754 LGA V 8 V 8 2.163 0 0.675 0.875 4.761 29.545 21.818 4.761 LGA G 9 G 9 1.320 0 0.536 0.536 2.843 46.364 46.364 - LGA S 10 S 10 6.719 0 0.674 0.771 9.730 0.455 0.303 9.730 LGA S 11 S 11 11.897 0 0.604 0.733 15.895 0.000 0.000 15.895 LGA Y 12 Y 12 12.234 0 0.669 0.980 12.955 0.000 0.000 12.303 LGA V 13 V 13 13.311 0 0.611 0.936 16.767 0.000 0.000 13.946 LGA A 14 A 14 17.389 0 0.630 0.610 21.197 0.000 0.000 - LGA E 15 E 15 24.104 0 0.645 1.258 30.709 0.000 0.000 30.202 LGA T 16 T 16 26.773 0 0.720 1.387 28.437 0.000 0.000 25.973 LGA G 17 G 17 28.556 0 0.127 0.127 29.593 0.000 0.000 - LGA Q 18 Q 18 27.827 0 0.065 1.241 30.125 0.000 0.000 29.219 LGA N 19 N 19 27.416 0 0.659 0.993 29.433 0.000 0.000 29.433 LGA W 20 W 20 29.458 0 0.059 1.272 33.181 0.000 0.000 29.050 LGA A 21 A 21 33.060 0 0.642 0.610 35.387 0.000 0.000 - LGA S 22 S 22 38.603 0 0.629 0.821 42.634 0.000 0.000 39.468 LGA L 23 L 23 43.352 0 0.641 1.418 45.737 0.000 0.000 44.606 LGA A 24 A 24 45.663 0 0.638 0.610 47.935 0.000 0.000 - LGA A 25 A 25 49.049 0 0.609 0.603 52.955 0.000 0.000 - LGA N 26 N 26 55.773 0 0.635 1.191 57.680 0.000 0.000 56.586 LGA E 27 E 27 57.034 0 0.678 1.154 60.470 0.000 0.000 56.041 LGA L 28 L 28 60.817 0 0.601 0.804 62.214 0.000 0.000 60.200 LGA R 29 R 29 64.777 0 0.556 1.439 67.245 0.000 0.000 67.245 LGA V 30 V 30 66.052 0 0.137 1.184 66.356 0.000 0.000 64.581 LGA T 31 T 31 68.707 0 0.707 0.628 70.928 0.000 0.000 70.928 LGA E 32 E 32 70.116 0 0.071 1.262 73.958 0.000 0.000 73.958 LGA R 33 R 33 68.548 0 0.051 1.205 74.059 0.000 0.000 72.670 LGA P 34 P 34 65.857 0 0.635 0.630 69.583 0.000 0.000 62.304 LGA F 35 F 35 69.782 0 0.063 1.124 72.448 0.000 0.000 72.430 LGA W 36 W 36 71.117 0 0.095 0.894 74.631 0.000 0.000 68.864 LGA I 37 I 37 72.661 0 0.659 0.787 73.787 0.000 0.000 73.182 LGA S 38 S 38 76.139 0 0.678 0.746 80.472 0.000 0.000 75.567 LGA S 39 S 39 81.707 0 0.709 0.829 82.710 0.000 0.000 82.686 LGA F 40 F 40 83.736 0 0.670 0.787 87.499 0.000 0.000 81.526 LGA I 41 I 41 87.321 0 0.052 1.275 89.084 0.000 0.000 86.672 LGA G 42 G 42 92.519 0 0.564 0.564 97.020 0.000 0.000 - LGA R 43 R 43 96.878 0 0.093 1.339 99.339 0.000 0.000 97.831 LGA S 44 S 44 100.589 0 0.087 0.683 103.820 0.000 0.000 102.272 LGA K 45 K 45 103.809 0 0.078 0.895 105.865 0.000 0.000 102.420 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 28.067 27.996 27.934 9.287 6.895 1.143 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 8 1.92 18.750 17.477 0.396 LGA_LOCAL RMSD: 1.921 Number of atoms: 8 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 54.929 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 28.067 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.662865 * X + -0.344193 * Y + -0.664937 * Z + -49.258167 Y_new = -0.736122 * X + -0.461926 * Y + -0.494720 * Z + 104.974083 Z_new = -0.136872 * X + 0.817408 * Y + -0.559563 * Z + -124.925354 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.837715 0.137303 2.171083 [DEG: -47.9975 7.8669 124.3939 ] ZXZ: -0.931139 2.164654 -0.165908 [DEG: -53.3504 124.0256 -9.5058 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS337_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 8 1.92 17.477 28.07 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS337_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 9 N ALA 2 10.092 34.722 13.749 1.00180.09 N ATOM 10 CA ALA 2 10.903 35.275 12.707 1.00180.09 C ATOM 11 CB ALA 2 11.108 34.334 11.508 1.00180.09 C ATOM 12 C ALA 2 10.223 36.495 12.192 1.00180.09 C ATOM 13 O ALA 2 9.004 36.634 12.290 1.00180.09 O ATOM 14 N VAL 3 11.020 37.421 11.628 1.00137.53 N ATOM 15 CA VAL 3 10.479 38.624 11.074 1.00137.53 C ATOM 16 CB VAL 3 11.513 39.664 10.747 1.00137.53 C ATOM 17 CG1 VAL 3 12.223 40.082 12.047 1.00137.53 C ATOM 18 CG2 VAL 3 12.456 39.105 9.667 1.00137.53 C ATOM 19 C VAL 3 9.798 38.243 9.803 1.00137.53 C ATOM 20 O VAL 3 10.094 37.205 9.212 1.00137.53 O ATOM 21 N GLN 4 8.831 39.072 9.368 1.00265.49 N ATOM 22 CA GLN 4 8.103 38.792 8.166 1.00265.49 C ATOM 23 CB GLN 4 7.054 39.869 7.840 1.00265.49 C ATOM 24 CG GLN 4 6.271 39.599 6.556 1.00265.49 C ATOM 25 CD GLN 4 5.339 38.424 6.804 1.00265.49 C ATOM 26 OE1 GLN 4 4.718 37.903 5.880 1.00265.49 O ATOM 27 NE2 GLN 4 5.239 37.991 8.090 1.00265.49 N ATOM 28 C GLN 4 9.084 38.749 7.042 1.00265.49 C ATOM 29 O GLN 4 9.950 39.615 6.927 1.00265.49 O ATOM 30 N GLY 5 8.979 37.706 6.193 1.00 98.09 N ATOM 31 CA GLY 5 9.892 37.539 5.099 1.00 98.09 C ATOM 32 C GLY 5 9.261 38.000 3.824 1.00 98.09 C ATOM 33 O GLY 5 8.201 38.623 3.786 1.00 98.09 O ATOM 34 N PRO 6 9.976 37.698 2.773 1.00237.82 N ATOM 35 CA PRO 6 9.539 38.008 1.439 1.00237.82 C ATOM 36 CD PRO 6 11.425 37.645 2.874 1.00237.82 C ATOM 37 CB PRO 6 10.767 37.829 0.547 1.00237.82 C ATOM 38 CG PRO 6 11.951 38.076 1.497 1.00237.82 C ATOM 39 C PRO 6 8.385 37.148 1.038 1.00237.82 C ATOM 40 O PRO 6 7.676 37.507 0.098 1.00237.82 O ATOM 41 N TRP 7 8.197 35.998 1.714 1.00299.07 N ATOM 42 CA TRP 7 7.131 35.099 1.381 1.00299.07 C ATOM 43 CB TRP 7 7.631 33.669 1.082 1.00299.07 C ATOM 44 CG TRP 7 6.590 32.572 1.006 1.00299.07 C ATOM 45 CD2 TRP 7 5.604 32.419 -0.031 1.00299.07 C ATOM 46 CD1 TRP 7 6.379 31.551 1.886 1.00299.07 C ATOM 47 NE1 TRP 7 5.343 30.760 1.454 1.00299.07 N ATOM 48 CE2 TRP 7 4.851 31.285 0.279 1.00299.07 C ATOM 49 CE3 TRP 7 5.344 33.163 -1.147 1.00299.07 C ATOM 50 CZ2 TRP 7 3.826 30.875 -0.526 1.00299.07 C ATOM 51 CZ3 TRP 7 4.310 32.745 -1.956 1.00299.07 C ATOM 52 CH2 TRP 7 3.566 31.622 -1.652 1.00299.07 C ATOM 53 C TRP 7 6.176 35.066 2.524 1.00299.07 C ATOM 54 O TRP 7 6.570 35.113 3.687 1.00299.07 O ATOM 55 N VAL 8 4.873 35.012 2.196 1.00113.77 N ATOM 56 CA VAL 8 3.853 34.982 3.198 1.00113.77 C ATOM 57 CB VAL 8 2.795 36.030 3.007 1.00113.77 C ATOM 58 CG1 VAL 8 2.094 35.784 1.658 1.00113.77 C ATOM 59 CG2 VAL 8 1.844 35.993 4.214 1.00113.77 C ATOM 60 C VAL 8 3.193 33.653 3.081 1.00113.77 C ATOM 61 O VAL 8 3.188 33.048 2.010 1.00113.77 O ATOM 62 N GLY 9 2.637 33.144 4.196 1.00117.31 N ATOM 63 CA GLY 9 2.016 31.861 4.108 1.00117.31 C ATOM 64 C GLY 9 0.846 31.830 5.031 1.00117.31 C ATOM 65 O GLY 9 0.820 32.497 6.065 1.00117.31 O ATOM 66 N SER 10 -0.161 31.028 4.646 1.00203.42 N ATOM 67 CA SER 10 -1.360 30.825 5.400 1.00203.42 C ATOM 68 CB SER 10 -2.447 31.877 5.128 1.00203.42 C ATOM 69 OG SER 10 -2.029 33.145 5.612 1.00203.42 O ATOM 70 C SER 10 -1.881 29.517 4.914 1.00203.42 C ATOM 71 O SER 10 -1.233 28.867 4.095 1.00203.42 O ATOM 72 N SER 11 -3.044 29.067 5.421 1.00136.75 N ATOM 73 CA SER 11 -3.531 27.835 4.878 1.00136.75 C ATOM 74 CB SER 11 -4.837 27.332 5.528 1.00136.75 C ATOM 75 OG SER 11 -5.898 28.245 5.301 1.00136.75 O ATOM 76 C SER 11 -3.789 28.106 3.434 1.00136.75 C ATOM 77 O SER 11 -4.740 28.793 3.065 1.00136.75 O ATOM 78 N TYR 12 -2.915 27.567 2.571 1.00287.64 N ATOM 79 CA TYR 12 -3.053 27.815 1.174 1.00287.64 C ATOM 80 CB TYR 12 -2.051 28.866 0.666 1.00287.64 C ATOM 81 CG TYR 12 -2.263 29.065 -0.793 1.00287.64 C ATOM 82 CD1 TYR 12 -3.284 29.867 -1.249 1.00287.64 C ATOM 83 CD2 TYR 12 -1.429 28.462 -1.703 1.00287.64 C ATOM 84 CE1 TYR 12 -3.479 30.053 -2.596 1.00287.64 C ATOM 85 CE2 TYR 12 -1.618 28.644 -3.053 1.00287.64 C ATOM 86 CZ TYR 12 -2.645 29.441 -3.501 1.00287.64 C ATOM 87 OH TYR 12 -2.841 29.630 -4.884 1.00287.64 O ATOM 88 C TYR 12 -2.751 26.527 0.495 1.00287.64 C ATOM 89 O TYR 12 -1.944 25.736 0.979 1.00287.64 O ATOM 90 N VAL 13 -3.422 26.264 -0.638 1.00136.44 N ATOM 91 CA VAL 13 -3.110 25.063 -1.343 1.00136.44 C ATOM 92 CB VAL 13 -4.276 24.130 -1.497 1.00136.44 C ATOM 93 CG1 VAL 13 -5.379 24.844 -2.297 1.00136.44 C ATOM 94 CG2 VAL 13 -3.777 22.833 -2.154 1.00136.44 C ATOM 95 C VAL 13 -2.670 25.476 -2.705 1.00136.44 C ATOM 96 O VAL 13 -3.308 26.307 -3.348 1.00136.44 O ATOM 97 N ALA 14 -1.538 24.919 -3.169 1.00202.30 N ATOM 98 CA ALA 14 -1.080 25.255 -4.481 1.00202.30 C ATOM 99 CB ALA 14 0.375 24.839 -4.760 1.00202.30 C ATOM 100 C ALA 14 -1.952 24.519 -5.435 1.00202.30 C ATOM 101 O ALA 14 -2.491 23.462 -5.111 1.00202.30 O ATOM 102 N GLU 15 -2.134 25.073 -6.646 1.00264.69 N ATOM 103 CA GLU 15 -2.961 24.392 -7.587 1.00264.69 C ATOM 104 CB GLU 15 -3.942 25.307 -8.335 1.00264.69 C ATOM 105 CG GLU 15 -4.912 24.535 -9.230 1.00264.69 C ATOM 106 CD GLU 15 -5.866 25.534 -9.864 1.00264.69 C ATOM 107 OE1 GLU 15 -5.651 26.759 -9.669 1.00264.69 O ATOM 108 OE2 GLU 15 -6.824 25.085 -10.547 1.00264.69 O ATOM 109 C GLU 15 -2.066 23.774 -8.604 1.00264.69 C ATOM 110 O GLU 15 -1.096 24.383 -9.053 1.00264.69 O ATOM 111 N THR 16 -2.367 22.517 -8.971 1.00256.58 N ATOM 112 CA THR 16 -1.588 21.850 -9.966 1.00256.58 C ATOM 113 CB THR 16 -0.791 20.694 -9.443 1.00256.58 C ATOM 114 OG1 THR 16 0.059 20.189 -10.461 1.00256.58 O ATOM 115 CG2 THR 16 -1.765 19.602 -8.970 1.00256.58 C ATOM 116 C THR 16 -2.548 21.300 -10.961 1.00256.58 C ATOM 117 O THR 16 -3.751 21.234 -10.715 1.00256.58 O ATOM 118 N GLY 17 -2.030 20.907 -12.137 1.00 58.43 N ATOM 119 CA GLY 17 -2.878 20.348 -13.141 1.00 58.43 C ATOM 120 C GLY 17 -3.245 21.438 -14.087 1.00 58.43 C ATOM 121 O GLY 17 -3.690 21.175 -15.203 1.00 58.43 O ATOM 122 N GLN 18 -3.063 22.705 -13.672 1.00230.53 N ATOM 123 CA GLN 18 -3.376 23.755 -14.591 1.00230.53 C ATOM 124 CB GLN 18 -3.417 25.150 -13.939 1.00230.53 C ATOM 125 CG GLN 18 -3.776 26.280 -14.904 1.00230.53 C ATOM 126 CD GLN 18 -3.779 27.583 -14.115 1.00230.53 C ATOM 127 OE1 GLN 18 -4.574 28.482 -14.378 1.00230.53 O ATOM 128 NE2 GLN 18 -2.855 27.691 -13.122 1.00230.53 N ATOM 129 C GLN 18 -2.267 23.726 -15.585 1.00230.53 C ATOM 130 O GLN 18 -1.096 23.829 -15.225 1.00230.53 O ATOM 131 N ASN 19 -2.612 23.565 -16.874 1.00234.22 N ATOM 132 CA ASN 19 -1.585 23.450 -17.862 1.00234.22 C ATOM 133 CB ASN 19 -2.050 22.766 -19.157 1.00234.22 C ATOM 134 CG ASN 19 -0.809 22.313 -19.910 1.00234.22 C ATOM 135 OD1 ASN 19 -0.091 21.419 -19.464 1.00234.22 O ATOM 136 ND2 ASN 19 -0.549 22.939 -21.088 1.00234.22 N ATOM 137 C ASN 19 -1.098 24.818 -18.199 1.00234.22 C ATOM 138 O ASN 19 -1.852 25.790 -18.154 1.00234.22 O ATOM 139 N TRP 20 0.202 24.921 -18.531 1.00282.66 N ATOM 140 CA TRP 20 0.776 26.184 -18.883 1.00282.66 C ATOM 141 CB TRP 20 2.096 26.490 -18.148 1.00282.66 C ATOM 142 CG TRP 20 2.721 27.823 -18.500 1.00282.66 C ATOM 143 CD2 TRP 20 4.007 28.257 -18.031 1.00282.66 C ATOM 144 CD1 TRP 20 2.243 28.824 -19.294 1.00282.66 C ATOM 145 NE1 TRP 20 3.151 29.856 -19.349 1.00282.66 N ATOM 146 CE2 TRP 20 4.243 29.519 -18.577 1.00282.66 C ATOM 147 CE3 TRP 20 4.919 27.653 -17.213 1.00282.66 C ATOM 148 CZ2 TRP 20 5.397 30.198 -18.312 1.00282.66 C ATOM 149 CZ3 TRP 20 6.083 28.342 -16.946 1.00282.66 C ATOM 150 CH2 TRP 20 6.317 29.589 -17.486 1.00282.66 C ATOM 151 C TRP 20 1.089 26.136 -20.340 1.00282.66 C ATOM 152 O TRP 20 1.622 25.142 -20.831 1.00282.66 O ATOM 153 N ALA 21 0.718 27.220 -21.054 1.00267.41 N ATOM 154 CA ALA 21 0.938 27.418 -22.461 1.00267.41 C ATOM 155 CB ALA 21 2.091 26.609 -23.085 1.00267.41 C ATOM 156 C ALA 21 -0.326 27.074 -23.172 1.00267.41 C ATOM 157 O ALA 21 -1.226 26.465 -22.597 1.00267.41 O ATOM 158 N SER 22 -0.432 27.472 -24.455 1.00176.70 N ATOM 159 CA SER 22 -1.622 27.181 -25.201 1.00176.70 C ATOM 160 CB SER 22 -2.295 28.432 -25.790 1.00176.70 C ATOM 161 OG SER 22 -3.463 28.067 -26.513 1.00176.70 O ATOM 162 C SER 22 -1.226 26.312 -26.345 1.00176.70 C ATOM 163 O SER 22 -0.146 26.467 -26.911 1.00176.70 O ATOM 164 N LEU 23 -2.098 25.349 -26.706 1.00286.06 N ATOM 165 CA LEU 23 -1.781 24.468 -27.790 1.00286.06 C ATOM 166 CB LEU 23 -1.821 22.981 -27.410 1.00286.06 C ATOM 167 CG LEU 23 -1.476 22.063 -28.593 1.00286.06 C ATOM 168 CD1 LEU 23 -0.040 22.308 -29.083 1.00286.06 C ATOM 169 CD2 LEU 23 -1.760 20.589 -28.260 1.00286.06 C ATOM 170 C LEU 23 -2.796 24.652 -28.864 1.00286.06 C ATOM 171 O LEU 23 -3.994 24.720 -28.597 1.00286.06 O ATOM 172 N ALA 24 -2.330 24.759 -30.122 1.00241.09 N ATOM 173 CA ALA 24 -3.256 24.873 -31.204 1.00241.09 C ATOM 174 CB ALA 24 -2.625 25.391 -32.507 1.00241.09 C ATOM 175 C ALA 24 -3.766 23.496 -31.459 1.00241.09 C ATOM 176 O ALA 24 -3.058 22.514 -31.245 1.00241.09 O ATOM 177 N ALA 25 -5.030 23.390 -31.908 1.00258.86 N ATOM 178 CA ALA 25 -5.571 22.096 -32.189 1.00258.86 C ATOM 179 CB ALA 25 -6.761 21.710 -31.295 1.00258.86 C ATOM 180 C ALA 25 -6.071 22.127 -33.592 1.00258.86 C ATOM 181 O ALA 25 -6.453 23.176 -34.108 1.00258.86 O ATOM 182 N ASN 26 -6.040 20.963 -34.264 1.00205.30 N ATOM 183 CA ASN 26 -6.550 20.901 -35.595 1.00205.30 C ATOM 184 CB ASN 26 -5.592 20.226 -36.595 1.00205.30 C ATOM 185 CG ASN 26 -4.324 21.064 -36.731 1.00205.30 C ATOM 186 OD1 ASN 26 -3.234 20.607 -36.390 1.00205.30 O ATOM 187 ND2 ASN 26 -4.457 22.315 -37.248 1.00205.30 N ATOM 188 C ASN 26 -7.761 20.037 -35.512 1.00205.30 C ATOM 189 O ASN 26 -7.682 18.883 -35.092 1.00205.30 O ATOM 190 N GLU 27 -8.930 20.579 -35.895 1.00250.32 N ATOM 191 CA GLU 27 -10.108 19.774 -35.828 1.00250.32 C ATOM 192 CB GLU 27 -11.314 20.493 -35.193 1.00250.32 C ATOM 193 CG GLU 27 -12.491 19.569 -34.856 1.00250.32 C ATOM 194 CD GLU 27 -13.602 20.416 -34.246 1.00250.32 C ATOM 195 OE1 GLU 27 -13.428 21.663 -34.210 1.00250.32 O ATOM 196 OE2 GLU 27 -14.636 19.838 -33.815 1.00250.32 O ATOM 197 C GLU 27 -10.465 19.446 -37.235 1.00250.32 C ATOM 198 O GLU 27 -10.351 20.287 -38.126 1.00250.32 O ATOM 199 N LEU 28 -10.884 18.192 -37.476 1.00253.79 N ATOM 200 CA LEU 28 -11.241 17.826 -38.810 1.00253.79 C ATOM 201 CB LEU 28 -10.816 16.389 -39.179 1.00253.79 C ATOM 202 CG LEU 28 -10.935 16.005 -40.673 1.00253.79 C ATOM 203 CD1 LEU 28 -10.506 14.546 -40.892 1.00253.79 C ATOM 204 CD2 LEU 28 -12.325 16.287 -41.265 1.00253.79 C ATOM 205 C LEU 28 -12.729 17.906 -38.848 1.00253.79 C ATOM 206 O LEU 28 -13.416 17.343 -37.998 1.00253.79 O ATOM 207 N ARG 29 -13.262 18.644 -39.839 1.00315.86 N ATOM 208 CA ARG 29 -14.680 18.779 -39.973 1.00315.86 C ATOM 209 CB ARG 29 -15.160 20.235 -39.825 1.00315.86 C ATOM 210 CG ARG 29 -16.679 20.426 -39.753 1.00315.86 C ATOM 211 CD ARG 29 -17.273 20.155 -38.368 1.00315.86 C ATOM 212 NE ARG 29 -17.313 18.683 -38.145 1.00315.86 N ATOM 213 CZ ARG 29 -18.464 17.996 -38.405 1.00315.86 C ATOM 214 NH1 ARG 29 -19.544 18.655 -38.919 1.00315.86 N ATOM 215 NH2 ARG 29 -18.537 16.658 -38.152 1.00315.86 N ATOM 216 C ARG 29 -14.994 18.366 -41.370 1.00315.86 C ATOM 217 O ARG 29 -14.240 18.666 -42.294 1.00315.86 O ATOM 218 N VAL 30 -16.110 17.640 -41.565 1.00133.32 N ATOM 219 CA VAL 30 -16.474 17.261 -42.897 1.00133.32 C ATOM 220 CB VAL 30 -16.494 15.775 -43.114 1.00133.32 C ATOM 221 CG1 VAL 30 -15.071 15.225 -42.916 1.00133.32 C ATOM 222 CG2 VAL 30 -17.530 15.159 -42.160 1.00133.32 C ATOM 223 C VAL 30 -17.859 17.770 -43.118 1.00133.32 C ATOM 224 O VAL 30 -18.682 17.765 -42.203 1.00133.32 O ATOM 225 N THR 31 -18.152 18.256 -44.340 1.00286.90 N ATOM 226 CA THR 31 -19.472 18.756 -44.588 1.00286.90 C ATOM 227 CB THR 31 -19.547 20.254 -44.636 1.00286.90 C ATOM 228 OG1 THR 31 -18.744 20.751 -45.699 1.00286.90 O ATOM 229 CG2 THR 31 -19.064 20.820 -43.292 1.00286.90 C ATOM 230 C THR 31 -19.923 18.268 -45.924 1.00286.90 C ATOM 231 O THR 31 -19.113 17.998 -46.809 1.00286.90 O ATOM 232 N GLU 32 -21.252 18.116 -46.085 1.00313.98 N ATOM 233 CA GLU 32 -21.805 17.753 -47.355 1.00313.98 C ATOM 234 CB GLU 32 -22.174 16.263 -47.501 1.00313.98 C ATOM 235 CG GLU 32 -23.183 15.740 -46.478 1.00313.98 C ATOM 236 CD GLU 32 -23.399 14.257 -46.756 1.00313.98 C ATOM 237 OE1 GLU 32 -23.212 13.834 -47.928 1.00313.98 O ATOM 238 OE2 GLU 32 -23.756 13.526 -45.794 1.00313.98 O ATOM 239 C GLU 32 -23.038 18.574 -47.512 1.00313.98 C ATOM 240 O GLU 32 -23.700 18.909 -46.530 1.00313.98 O ATOM 241 N ARG 33 -23.376 18.940 -48.760 1.00231.51 N ATOM 242 CA ARG 33 -24.516 19.781 -48.939 1.00231.51 C ATOM 243 CB ARG 33 -24.645 20.319 -50.373 1.00231.51 C ATOM 244 CG ARG 33 -23.461 21.214 -50.745 1.00231.51 C ATOM 245 CD ARG 33 -23.435 21.702 -52.195 1.00231.51 C ATOM 246 NE ARG 33 -22.198 22.526 -52.329 1.00231.51 N ATOM 247 CZ ARG 33 -21.761 22.937 -53.554 1.00231.51 C ATOM 248 NH1 ARG 33 -22.498 22.665 -54.670 1.00231.51 N ATOM 249 NH2 ARG 33 -20.583 23.615 -53.667 1.00231.51 N ATOM 250 C ARG 33 -25.723 18.975 -48.608 1.00231.51 C ATOM 251 O ARG 33 -25.871 17.825 -49.023 1.00231.51 O ATOM 252 N PRO 34 -26.571 19.562 -47.817 1.00261.83 N ATOM 253 CA PRO 34 -27.778 18.885 -47.456 1.00261.83 C ATOM 254 CD PRO 34 -26.108 20.448 -46.757 1.00261.83 C ATOM 255 CB PRO 34 -28.357 19.663 -46.276 1.00261.83 C ATOM 256 CG PRO 34 -27.112 20.270 -45.606 1.00261.83 C ATOM 257 C PRO 34 -28.706 18.742 -48.614 1.00261.83 C ATOM 258 O PRO 34 -29.527 17.826 -48.600 1.00261.83 O ATOM 259 N PHE 35 -28.618 19.630 -49.622 1.00285.64 N ATOM 260 CA PHE 35 -29.551 19.498 -50.698 1.00285.64 C ATOM 261 CB PHE 35 -30.682 20.537 -50.601 1.00285.64 C ATOM 262 CG PHE 35 -31.854 20.061 -51.388 1.00285.64 C ATOM 263 CD1 PHE 35 -32.764 19.216 -50.798 1.00285.64 C ATOM 264 CD2 PHE 35 -32.054 20.453 -52.691 1.00285.64 C ATOM 265 CE1 PHE 35 -33.858 18.759 -51.495 1.00285.64 C ATOM 266 CE2 PHE 35 -33.147 20.000 -53.393 1.00285.64 C ATOM 267 CZ PHE 35 -34.051 19.153 -52.796 1.00285.64 C ATOM 268 C PHE 35 -28.794 19.767 -51.961 1.00285.64 C ATOM 269 O PHE 35 -27.932 20.643 -52.000 1.00285.64 O ATOM 270 N TRP 36 -29.086 19.007 -53.035 1.00190.83 N ATOM 271 CA TRP 36 -28.397 19.263 -54.265 1.00190.83 C ATOM 272 CB TRP 36 -27.801 18.003 -54.923 1.00190.83 C ATOM 273 CG TRP 36 -26.630 17.398 -54.187 1.00190.83 C ATOM 274 CD2 TRP 36 -25.974 16.184 -54.584 1.00190.83 C ATOM 275 CD1 TRP 36 -25.989 17.837 -53.068 1.00190.83 C ATOM 276 NE1 TRP 36 -24.972 16.972 -52.739 1.00190.83 N ATOM 277 CE2 TRP 36 -24.952 15.948 -53.664 1.00190.83 C ATOM 278 CE3 TRP 36 -26.204 15.334 -55.627 1.00190.83 C ATOM 279 CZ2 TRP 36 -24.142 14.855 -53.775 1.00190.83 C ATOM 280 CZ3 TRP 36 -25.385 14.232 -55.737 1.00190.83 C ATOM 281 CH2 TRP 36 -24.374 13.998 -54.828 1.00190.83 C ATOM 282 C TRP 36 -29.397 19.815 -55.226 1.00190.83 C ATOM 283 O TRP 36 -30.285 19.101 -55.693 1.00190.83 O ATOM 284 N ILE 37 -29.288 21.116 -55.549 1.00148.77 N ATOM 285 CA ILE 37 -30.211 21.665 -56.495 1.00148.77 C ATOM 286 CB ILE 37 -31.182 22.642 -55.881 1.00148.77 C ATOM 287 CG1 ILE 37 -32.356 22.950 -56.831 1.00148.77 C ATOM 288 CG2 ILE 37 -30.396 23.886 -55.438 1.00148.77 C ATOM 289 CD1 ILE 37 -31.974 23.702 -58.107 1.00148.77 C ATOM 290 C ILE 37 -29.409 22.367 -57.539 1.00148.77 C ATOM 291 O ILE 37 -28.471 23.102 -57.230 1.00148.77 O ATOM 292 N SER 38 -29.734 22.129 -58.824 1.00150.11 N ATOM 293 CA SER 38 -29.024 22.818 -59.857 1.00150.11 C ATOM 294 CB SER 38 -28.056 21.922 -60.646 1.00150.11 C ATOM 295 OG SER 38 -27.026 21.439 -59.792 1.00150.11 O ATOM 296 C SER 38 -30.042 23.313 -60.828 1.00150.11 C ATOM 297 O SER 38 -30.961 22.588 -61.205 1.00150.11 O ATOM 298 N SER 39 -29.916 24.585 -61.243 1.00228.52 N ATOM 299 CA SER 39 -30.821 25.107 -62.221 1.00228.52 C ATOM 300 CB SER 39 -32.105 25.715 -61.629 1.00228.52 C ATOM 301 OG SER 39 -32.933 26.212 -62.669 1.00228.52 O ATOM 302 C SER 39 -30.103 26.207 -62.915 1.00228.52 C ATOM 303 O SER 39 -29.269 26.888 -62.320 1.00228.52 O ATOM 304 N PHE 40 -30.381 26.390 -64.217 1.00290.85 N ATOM 305 CA PHE 40 -29.746 27.471 -64.899 1.00290.85 C ATOM 306 CB PHE 40 -28.213 27.335 -64.938 1.00290.85 C ATOM 307 CG PHE 40 -27.644 28.647 -65.354 1.00290.85 C ATOM 308 CD1 PHE 40 -27.567 29.682 -64.451 1.00290.85 C ATOM 309 CD2 PHE 40 -27.175 28.843 -66.631 1.00290.85 C ATOM 310 CE1 PHE 40 -27.042 30.900 -64.815 1.00290.85 C ATOM 311 CE2 PHE 40 -26.649 30.059 -67.000 1.00290.85 C ATOM 312 CZ PHE 40 -26.582 31.089 -66.095 1.00290.85 C ATOM 313 C PHE 40 -30.271 27.448 -66.293 1.00290.85 C ATOM 314 O PHE 40 -30.873 26.463 -66.720 1.00290.85 O ATOM 315 N ILE 41 -30.075 28.547 -67.041 1.00156.27 N ATOM 316 CA ILE 41 -30.552 28.548 -68.389 1.00156.27 C ATOM 317 CB ILE 41 -31.465 29.700 -68.710 1.00156.27 C ATOM 318 CG1 ILE 41 -32.031 29.550 -70.133 1.00156.27 C ATOM 319 CG2 ILE 41 -30.709 31.016 -68.461 1.00156.27 C ATOM 320 CD1 ILE 41 -32.987 28.368 -70.290 1.00156.27 C ATOM 321 C ILE 41 -29.371 28.624 -69.296 1.00156.27 C ATOM 322 O ILE 41 -28.529 29.515 -69.182 1.00156.27 O ATOM 323 N GLY 42 -29.271 27.653 -70.218 1.00119.65 N ATOM 324 CA GLY 42 -28.208 27.701 -71.169 1.00119.65 C ATOM 325 C GLY 42 -28.879 27.981 -72.464 1.00119.65 C ATOM 326 O GLY 42 -29.521 27.111 -73.050 1.00119.65 O ATOM 327 N ARG 43 -28.745 29.228 -72.943 1.00287.62 N ATOM 328 CA ARG 43 -29.395 29.584 -74.161 1.00287.62 C ATOM 329 CB ARG 43 -30.586 30.526 -73.927 1.00287.62 C ATOM 330 CG ARG 43 -31.301 31.008 -75.188 1.00287.62 C ATOM 331 CD ARG 43 -32.468 31.935 -74.849 1.00287.62 C ATOM 332 NE ARG 43 -32.127 32.575 -73.547 1.00287.62 N ATOM 333 CZ ARG 43 -32.583 33.827 -73.251 1.00287.62 C ATOM 334 NH1 ARG 43 -33.327 34.515 -74.162 1.00287.62 N ATOM 335 NH2 ARG 43 -32.288 34.387 -72.041 1.00287.62 N ATOM 336 C ARG 43 -28.397 30.307 -74.993 1.00287.62 C ATOM 337 O ARG 43 -27.728 31.227 -74.524 1.00287.62 O ATOM 338 N SER 44 -28.272 29.894 -76.264 1.00158.63 N ATOM 339 CA SER 44 -27.358 30.557 -77.137 1.00158.63 C ATOM 340 CB SER 44 -26.555 29.584 -78.019 1.00158.63 C ATOM 341 OG SER 44 -25.666 30.299 -78.866 1.00158.63 O ATOM 342 C SER 44 -28.205 31.389 -78.031 1.00158.63 C ATOM 343 O SER 44 -29.105 30.878 -78.696 1.00158.63 O ATOM 344 N LYS 45 -27.950 32.707 -78.066 1.00242.99 N ATOM 345 CA LYS 45 -28.794 33.519 -78.884 1.00242.99 C ATOM 346 CB LYS 45 -29.675 34.491 -78.083 1.00242.99 C ATOM 347 CG LYS 45 -30.581 35.356 -78.963 1.00242.99 C ATOM 348 CD LYS 45 -31.726 36.019 -78.200 1.00242.99 C ATOM 349 CE LYS 45 -32.891 35.067 -77.927 1.00242.99 C ATOM 350 NZ LYS 45 -32.526 34.115 -76.856 1.00242.99 N ATOM 351 C LYS 45 -27.963 34.335 -79.809 1.00242.99 C ATOM 352 O LYS 45 -27.003 34.990 -79.407 1.00242.99 O TER END