####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS337_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 4.90 27.00 LONGEST_CONTINUOUS_SEGMENT: 16 25 - 40 4.97 20.25 LONGEST_CONTINUOUS_SEGMENT: 16 26 - 41 4.58 20.91 LCS_AVERAGE: 34.87 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 29 - 38 1.87 24.61 LCS_AVERAGE: 15.50 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 28 - 33 0.72 21.32 LONGEST_CONTINUOUS_SEGMENT: 6 30 - 35 0.98 22.81 LONGEST_CONTINUOUS_SEGMENT: 6 32 - 37 0.99 26.63 LONGEST_CONTINUOUS_SEGMENT: 6 33 - 38 0.77 24.51 LCS_AVERAGE: 9.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 16 3 3 4 4 6 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT V 3 V 3 4 6 16 3 3 4 5 6 6 8 10 10 10 12 13 14 14 16 16 17 18 19 19 LCS_GDT Q 4 Q 4 4 6 16 3 4 4 5 6 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT G 5 G 5 4 6 16 3 4 4 5 6 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT P 6 P 6 4 6 16 3 4 4 5 6 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT W 7 W 7 4 6 16 3 4 4 5 6 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT V 8 V 8 4 5 16 3 4 4 4 5 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT G 9 G 9 4 5 16 3 4 4 4 5 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT S 10 S 10 4 5 16 3 4 4 4 5 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT S 11 S 11 4 4 16 3 4 4 4 4 5 6 7 8 9 9 11 14 14 16 16 17 18 19 19 LCS_GDT Y 12 Y 12 4 4 16 3 4 4 4 4 5 6 7 8 9 9 11 14 14 15 16 17 18 19 19 LCS_GDT V 13 V 13 4 4 16 3 4 4 4 5 6 9 10 11 11 12 13 14 14 16 16 17 18 19 19 LCS_GDT A 14 A 14 3 4 16 3 3 3 3 4 5 8 9 11 11 12 13 14 14 16 16 17 18 20 25 LCS_GDT E 15 E 15 3 5 16 3 3 3 4 5 6 8 8 9 11 11 12 14 14 16 16 17 18 19 24 LCS_GDT T 16 T 16 3 5 16 3 3 3 4 5 6 8 9 11 11 12 13 14 14 16 16 18 19 20 22 LCS_GDT G 17 G 17 3 5 16 3 3 3 4 5 6 8 8 9 9 10 13 15 16 18 19 19 22 23 25 LCS_GDT Q 18 Q 18 3 5 12 0 3 3 4 4 6 8 8 9 9 10 13 15 16 18 19 19 22 23 25 LCS_GDT N 19 N 19 4 6 13 3 3 4 5 7 7 8 10 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT W 20 W 20 4 6 13 3 3 4 4 7 7 9 10 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT A 21 A 21 4 6 13 3 3 4 5 7 7 8 8 9 10 14 14 15 16 18 19 19 21 23 25 LCS_GDT S 22 S 22 4 6 13 3 3 4 5 7 9 9 10 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT L 23 L 23 3 6 13 3 3 4 5 7 7 9 9 11 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT A 24 A 24 3 6 14 3 3 4 5 7 7 8 8 9 10 11 13 14 17 18 19 19 22 23 25 LCS_GDT A 25 A 25 3 5 16 3 3 4 5 5 6 8 8 9 9 10 11 11 14 14 17 19 22 23 25 LCS_GDT N 26 N 26 3 5 16 3 3 4 5 7 7 8 8 9 10 11 14 16 17 17 18 19 22 23 25 LCS_GDT E 27 E 27 3 9 16 1 3 4 5 7 8 10 12 13 13 13 14 16 17 17 18 19 21 23 25 LCS_GDT L 28 L 28 6 9 16 1 5 6 8 9 10 11 12 13 13 13 14 16 17 17 18 19 21 23 25 LCS_GDT R 29 R 29 6 10 16 3 5 7 8 8 10 11 12 13 13 13 13 16 17 17 18 19 21 23 25 LCS_GDT V 30 V 30 6 10 16 4 5 7 8 9 10 11 12 13 13 13 14 16 17 17 18 19 22 23 25 LCS_GDT T 31 T 31 6 10 16 4 5 7 8 9 10 11 12 13 13 13 14 16 17 17 18 19 22 23 25 LCS_GDT E 32 E 32 6 10 16 4 5 7 8 9 10 11 12 13 13 13 14 16 17 17 18 19 22 23 25 LCS_GDT R 33 R 33 6 10 16 4 6 7 8 9 10 11 12 13 13 13 13 16 17 17 18 19 21 21 23 LCS_GDT P 34 P 34 6 10 16 3 6 7 8 9 10 11 12 13 13 13 14 16 17 17 18 19 21 23 25 LCS_GDT F 35 F 35 6 10 16 4 6 7 8 9 10 11 12 13 13 13 14 16 17 18 19 19 22 23 25 LCS_GDT W 36 W 36 6 10 16 4 6 7 8 9 10 11 12 13 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT I 37 I 37 6 10 16 4 6 6 8 9 9 11 12 13 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT S 38 S 38 6 10 16 4 6 7 8 9 10 11 12 13 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT S 39 S 39 3 7 16 2 3 6 6 7 9 10 12 13 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT F 40 F 40 3 7 16 3 3 4 5 7 9 10 12 12 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT I 41 I 41 3 7 16 3 3 3 5 7 9 10 12 12 13 14 14 16 17 18 19 19 22 23 25 LCS_GDT G 42 G 42 3 7 14 3 3 4 5 7 9 10 12 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT R 43 R 43 3 7 14 3 3 3 4 7 9 10 12 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT S 44 S 44 3 7 14 3 3 5 6 7 9 9 12 12 13 14 14 15 16 18 19 19 22 23 25 LCS_GDT K 45 K 45 3 7 14 3 3 4 5 7 9 9 10 12 13 14 14 15 16 18 19 19 21 22 24 LCS_AVERAGE LCS_A: 19.90 ( 9.35 15.50 34.87 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 9 10 11 12 13 13 14 14 16 17 18 19 19 22 23 25 GDT PERCENT_AT 9.09 13.64 15.91 18.18 20.45 22.73 25.00 27.27 29.55 29.55 31.82 31.82 36.36 38.64 40.91 43.18 43.18 50.00 52.27 56.82 GDT RMS_LOCAL 0.20 0.77 1.01 1.22 1.45 1.92 2.12 2.55 2.84 2.84 3.44 3.44 4.58 5.00 4.89 5.11 5.11 6.64 6.79 7.30 GDT RMS_ALL_AT 23.17 24.51 26.28 25.64 25.42 23.45 23.51 22.15 22.45 22.45 20.06 20.06 20.91 19.84 19.61 19.43 19.43 18.17 17.99 18.24 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 31.791 0 0.057 0.062 32.645 0.000 0.000 - LGA V 3 V 3 34.732 0 0.128 1.049 39.285 0.000 0.000 35.919 LGA Q 4 Q 4 33.709 0 0.081 1.203 35.861 0.000 0.000 34.216 LGA G 5 G 5 34.839 0 0.062 0.062 34.839 0.000 0.000 - LGA P 6 P 6 34.881 0 0.729 0.632 35.532 0.000 0.000 35.080 LGA W 7 W 7 33.089 0 0.341 1.164 35.218 0.000 0.000 27.951 LGA V 8 V 8 36.617 0 0.673 0.683 40.017 0.000 0.000 40.017 LGA G 9 G 9 36.947 0 0.553 0.553 38.026 0.000 0.000 - LGA S 10 S 10 34.369 0 0.668 0.719 34.501 0.000 0.000 31.294 LGA S 11 S 11 33.140 0 0.051 0.052 33.695 0.000 0.000 32.456 LGA Y 12 Y 12 32.773 0 0.657 1.315 33.836 0.000 0.000 32.821 LGA V 13 V 13 31.735 0 0.608 1.452 33.656 0.000 0.000 33.656 LGA A 14 A 14 26.466 0 0.629 0.609 28.137 0.000 0.000 - LGA E 15 E 15 22.712 0 0.644 1.418 24.443 0.000 0.000 21.536 LGA T 16 T 16 25.226 0 0.740 1.425 26.808 0.000 0.000 26.463 LGA G 17 G 17 23.088 0 0.652 0.652 24.136 0.000 0.000 - LGA Q 18 Q 18 22.515 0 0.596 1.254 24.145 0.000 0.000 23.888 LGA N 19 N 19 20.284 0 0.664 1.236 22.389 0.000 0.000 19.397 LGA W 20 W 20 23.822 0 0.169 1.052 33.681 0.000 0.000 33.681 LGA A 21 A 21 20.752 0 0.634 0.589 22.405 0.000 0.000 - LGA S 22 S 22 19.667 0 0.565 0.756 20.782 0.000 0.000 20.197 LGA L 23 L 23 16.138 0 0.607 0.564 19.269 0.000 0.000 17.475 LGA A 24 A 24 12.618 0 0.629 0.600 14.063 0.000 0.000 - LGA A 25 A 25 13.091 0 0.415 0.414 15.950 0.000 0.000 - LGA N 26 N 26 11.187 0 0.632 0.977 15.787 0.000 0.000 12.304 LGA E 27 E 27 4.415 0 0.630 1.223 6.948 10.455 13.535 3.137 LGA L 28 L 28 1.668 0 0.593 1.385 5.500 33.182 24.545 4.791 LGA R 29 R 29 3.074 0 0.491 1.224 11.335 33.182 12.562 11.335 LGA V 30 V 30 1.831 0 0.062 1.073 3.631 44.545 44.156 0.960 LGA T 31 T 31 1.888 0 0.129 0.126 2.259 50.909 45.455 2.259 LGA E 32 E 32 1.738 0 0.110 0.760 4.101 50.909 29.899 4.101 LGA R 33 R 33 2.638 0 0.136 1.430 15.312 36.818 13.388 15.312 LGA P 34 P 34 1.529 0 0.333 0.501 2.537 48.636 51.948 2.078 LGA F 35 F 35 1.399 0 0.125 1.225 10.931 46.364 20.331 10.931 LGA W 36 W 36 2.367 0 0.084 1.262 6.669 48.182 18.052 6.488 LGA I 37 I 37 3.574 0 0.144 1.325 6.977 20.909 15.455 3.532 LGA S 38 S 38 2.644 0 0.674 0.724 6.939 15.909 10.909 6.939 LGA S 39 S 39 5.742 0 0.667 0.816 7.887 4.545 3.030 7.662 LGA F 40 F 40 9.869 0 0.662 0.859 12.959 0.000 0.000 10.822 LGA I 41 I 41 12.268 0 0.163 1.025 14.225 0.000 0.000 11.650 LGA G 42 G 42 18.723 0 0.177 0.177 21.165 0.000 0.000 - LGA R 43 R 43 20.705 0 0.384 1.609 21.537 0.000 0.000 21.537 LGA S 44 S 44 21.398 0 0.104 0.125 24.392 0.000 0.000 19.669 LGA K 45 K 45 25.412 0 0.048 0.438 33.510 0.000 0.000 33.510 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 14.170 13.995 14.799 10.103 6.892 5.558 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.55 25.568 23.132 0.452 LGA_LOCAL RMSD: 2.554 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.153 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 14.170 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.536572 * X + 0.013418 * Y + -0.843748 * Z + 26.237373 Y_new = -0.838101 * X + 0.108086 * Y + 0.534700 * Z + -46.916256 Z_new = 0.098372 * X + 0.994051 * Y + -0.046750 * Z + -90.394585 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.140268 -0.098531 1.617792 [DEG: -122.6283 -5.6454 92.6926 ] ZXZ: -2.135642 1.617564 0.098640 [DEG: -122.3633 92.6796 5.6516 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS337_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.55 23.132 14.17 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS337_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 9 N ALA 2 29.656 38.904 -11.658 1.00212.07 N ATOM 10 CA ALA 2 30.774 38.276 -11.026 1.00212.07 C ATOM 11 CB ALA 2 30.531 36.802 -10.665 1.00212.07 C ATOM 12 C ALA 2 31.870 38.301 -12.033 1.00212.07 C ATOM 13 O ALA 2 31.618 38.402 -13.232 1.00212.07 O ATOM 14 N VAL 3 33.130 38.236 -11.570 1.00129.11 N ATOM 15 CA VAL 3 34.203 38.263 -12.516 1.00129.11 C ATOM 16 CB VAL 3 35.083 39.471 -12.406 1.00129.11 C ATOM 17 CG1 VAL 3 35.793 39.436 -11.042 1.00129.11 C ATOM 18 CG2 VAL 3 36.042 39.493 -13.609 1.00129.11 C ATOM 19 C VAL 3 35.052 37.063 -12.270 1.00129.11 C ATOM 20 O VAL 3 35.006 36.461 -11.199 1.00129.11 O ATOM 21 N GLN 4 35.830 36.673 -13.295 1.00217.82 N ATOM 22 CA GLN 4 36.701 35.540 -13.217 1.00217.82 C ATOM 23 CB GLN 4 37.053 34.960 -14.592 1.00217.82 C ATOM 24 CG GLN 4 37.879 35.939 -15.424 1.00217.82 C ATOM 25 CD GLN 4 38.172 35.298 -16.769 1.00217.82 C ATOM 26 OE1 GLN 4 37.658 34.226 -17.086 1.00217.82 O ATOM 27 NE2 GLN 4 39.014 35.980 -17.592 1.00217.82 N ATOM 28 C GLN 4 37.985 36.005 -12.618 1.00217.82 C ATOM 29 O GLN 4 38.249 37.203 -12.537 1.00217.82 O ATOM 30 N GLY 5 38.813 35.049 -12.159 1.00102.56 N ATOM 31 CA GLY 5 40.082 35.388 -11.592 1.00102.56 C ATOM 32 C GLY 5 40.337 34.384 -10.524 1.00102.56 C ATOM 33 O GLY 5 39.515 33.504 -10.277 1.00102.56 O ATOM 34 N PRO 6 41.461 34.485 -9.880 1.00161.29 N ATOM 35 CA PRO 6 41.704 33.563 -8.812 1.00161.29 C ATOM 36 CD PRO 6 42.690 34.863 -10.561 1.00161.29 C ATOM 37 CB PRO 6 43.197 33.644 -8.515 1.00161.29 C ATOM 38 CG PRO 6 43.806 34.058 -9.867 1.00161.29 C ATOM 39 C PRO 6 40.821 33.970 -7.686 1.00161.29 C ATOM 40 O PRO 6 40.451 35.142 -7.620 1.00161.29 O ATOM 41 N TRP 7 40.448 33.032 -6.800 1.00241.89 N ATOM 42 CA TRP 7 39.583 33.434 -5.736 1.00241.89 C ATOM 43 CB TRP 7 38.437 32.444 -5.467 1.00241.89 C ATOM 44 CG TRP 7 37.521 32.854 -4.342 1.00241.89 C ATOM 45 CD2 TRP 7 36.498 33.856 -4.453 1.00241.89 C ATOM 46 CD1 TRP 7 37.487 32.405 -3.055 1.00241.89 C ATOM 47 NE1 TRP 7 36.499 33.057 -2.358 1.00241.89 N ATOM 48 CE2 TRP 7 35.886 33.954 -3.205 1.00241.89 C ATOM 49 CE3 TRP 7 36.106 34.634 -5.504 1.00241.89 C ATOM 50 CZ2 TRP 7 34.867 34.837 -2.989 1.00241.89 C ATOM 51 CZ3 TRP 7 35.072 35.519 -5.285 1.00241.89 C ATOM 52 CH2 TRP 7 34.465 35.617 -4.051 1.00241.89 C ATOM 53 C TRP 7 40.413 33.566 -4.505 1.00241.89 C ATOM 54 O TRP 7 41.159 32.661 -4.134 1.00241.89 O ATOM 55 N VAL 8 40.301 34.735 -3.850 1.00 46.19 N ATOM 56 CA VAL 8 41.060 35.000 -2.671 1.00 46.19 C ATOM 57 CB VAL 8 42.037 36.127 -2.854 1.00 46.19 C ATOM 58 CG1 VAL 8 42.760 36.391 -1.521 1.00 46.19 C ATOM 59 CG2 VAL 8 42.985 35.770 -4.011 1.00 46.19 C ATOM 60 C VAL 8 40.077 35.419 -1.633 1.00 46.19 C ATOM 61 O VAL 8 38.971 35.854 -1.951 1.00 46.19 O ATOM 62 N GLY 9 40.446 35.277 -0.347 1.00 61.88 N ATOM 63 CA GLY 9 39.538 35.698 0.673 1.00 61.88 C ATOM 64 C GLY 9 39.418 37.173 0.512 1.00 61.88 C ATOM 65 O GLY 9 40.324 37.826 -0.003 1.00 61.88 O ATOM 66 N SER 10 38.283 37.744 0.954 1.00159.14 N ATOM 67 CA SER 10 38.101 39.150 0.766 1.00159.14 C ATOM 68 CB SER 10 36.744 39.525 0.149 1.00159.14 C ATOM 69 OG SER 10 36.644 38.992 -1.164 1.00159.14 O ATOM 70 C SER 10 38.168 39.811 2.098 1.00159.14 C ATOM 71 O SER 10 37.875 39.207 3.128 1.00159.14 O ATOM 72 N SER 11 38.581 41.092 2.094 1.00100.19 N ATOM 73 CA SER 11 38.679 41.839 3.309 1.00100.19 C ATOM 74 CB SER 11 39.205 43.271 3.078 1.00100.19 C ATOM 75 OG SER 11 39.285 43.978 4.308 1.00100.19 O ATOM 76 C SER 11 37.296 41.925 3.857 1.00100.19 C ATOM 77 O SER 11 37.070 41.734 5.052 1.00100.19 O ATOM 78 N TYR 12 36.320 42.190 2.968 1.00271.56 N ATOM 79 CA TYR 12 34.960 42.281 3.390 1.00271.56 C ATOM 80 CB TYR 12 34.307 43.631 3.055 1.00271.56 C ATOM 81 CG TYR 12 32.865 43.533 3.413 1.00271.56 C ATOM 82 CD1 TYR 12 32.441 43.713 4.711 1.00271.56 C ATOM 83 CD2 TYR 12 31.933 43.265 2.440 1.00271.56 C ATOM 84 CE1 TYR 12 31.103 43.622 5.028 1.00271.56 C ATOM 85 CE2 TYR 12 30.597 43.175 2.749 1.00271.56 C ATOM 86 CZ TYR 12 30.179 43.353 4.046 1.00271.56 C ATOM 87 OH TYR 12 28.806 43.259 4.362 1.00271.56 O ATOM 88 C TYR 12 34.196 41.235 2.657 1.00271.56 C ATOM 89 O TYR 12 34.404 41.014 1.465 1.00271.56 O ATOM 90 N VAL 13 33.306 40.529 3.377 1.00137.22 N ATOM 91 CA VAL 13 32.500 39.539 2.732 1.00137.22 C ATOM 92 CB VAL 13 32.688 38.157 3.285 1.00137.22 C ATOM 93 CG1 VAL 13 34.126 37.692 2.997 1.00137.22 C ATOM 94 CG2 VAL 13 32.347 38.191 4.784 1.00137.22 C ATOM 95 C VAL 13 31.076 39.919 2.965 1.00137.22 C ATOM 96 O VAL 13 30.691 40.269 4.081 1.00137.22 O ATOM 97 N ALA 14 30.256 39.890 1.897 1.00205.67 N ATOM 98 CA ALA 14 28.865 40.196 2.047 1.00205.67 C ATOM 99 CB ALA 14 28.167 40.589 0.732 1.00205.67 C ATOM 100 C ALA 14 28.206 38.966 2.572 1.00205.67 C ATOM 101 O ALA 14 28.674 37.853 2.337 1.00205.67 O ATOM 102 N GLU 15 27.102 39.141 3.322 1.00270.80 N ATOM 103 CA GLU 15 26.421 38.008 3.872 1.00270.80 C ATOM 104 CB GLU 15 25.463 38.362 5.025 1.00270.80 C ATOM 105 CG GLU 15 26.157 38.983 6.240 1.00270.80 C ATOM 106 CD GLU 15 26.822 37.881 7.052 1.00270.80 C ATOM 107 OE1 GLU 15 26.417 36.698 6.894 1.00270.80 O ATOM 108 OE2 GLU 15 27.740 38.210 7.851 1.00270.80 O ATOM 109 C GLU 15 25.584 37.411 2.794 1.00270.80 C ATOM 110 O GLU 15 25.061 38.112 1.930 1.00270.80 O ATOM 111 N THR 16 25.463 36.071 2.818 1.00282.21 N ATOM 112 CA THR 16 24.615 35.370 1.902 1.00282.21 C ATOM 113 CB THR 16 25.354 34.473 0.954 1.00282.21 C ATOM 114 OG1 THR 16 24.471 33.991 -0.051 1.00282.21 O ATOM 115 CG2 THR 16 25.939 33.293 1.745 1.00282.21 C ATOM 116 C THR 16 23.793 34.485 2.772 1.00282.21 C ATOM 117 O THR 16 24.186 34.193 3.901 1.00282.21 O ATOM 118 N GLY 17 22.613 34.046 2.305 1.00114.60 N ATOM 119 CA GLY 17 21.904 33.179 3.190 1.00114.60 C ATOM 120 C GLY 17 20.649 32.716 2.541 1.00114.60 C ATOM 121 O GLY 17 20.022 33.430 1.760 1.00114.60 O ATOM 122 N GLN 18 20.273 31.470 2.880 1.00107.32 N ATOM 123 CA GLN 18 19.053 30.869 2.449 1.00107.32 C ATOM 124 CB GLN 18 18.929 29.416 2.941 1.00107.32 C ATOM 125 CG GLN 18 18.908 29.307 4.469 1.00107.32 C ATOM 126 CD GLN 18 18.841 27.844 4.865 1.00107.32 C ATOM 127 OE1 GLN 18 19.035 27.496 6.029 1.00107.32 O ATOM 128 NE2 GLN 18 18.568 26.956 3.872 1.00107.32 N ATOM 129 C GLN 18 17.965 31.663 3.087 1.00107.32 C ATOM 130 O GLN 18 16.952 31.976 2.463 1.00107.32 O ATOM 131 N ASN 19 18.171 32.024 4.368 1.00204.01 N ATOM 132 CA ASN 19 17.200 32.779 5.095 1.00204.01 C ATOM 133 CB ASN 19 16.755 32.084 6.399 1.00204.01 C ATOM 134 CG ASN 19 15.628 32.879 7.046 1.00204.01 C ATOM 135 OD1 ASN 19 14.918 33.633 6.382 1.00204.01 O ATOM 136 ND2 ASN 19 15.457 32.706 8.385 1.00204.01 N ATOM 137 C ASN 19 17.859 34.063 5.475 1.00204.01 C ATOM 138 O ASN 19 18.988 34.074 5.964 1.00204.01 O ATOM 139 N TRP 20 17.168 35.191 5.233 1.00311.25 N ATOM 140 CA TRP 20 17.689 36.461 5.637 1.00311.25 C ATOM 141 CB TRP 20 17.760 37.517 4.518 1.00311.25 C ATOM 142 CG TRP 20 18.264 38.870 4.967 1.00311.25 C ATOM 143 CD2 TRP 20 19.606 39.125 5.421 1.00311.25 C ATOM 144 CD1 TRP 20 17.588 40.048 5.085 1.00311.25 C ATOM 145 NE1 TRP 20 18.426 41.027 5.564 1.00311.25 N ATOM 146 CE2 TRP 20 19.668 40.472 5.783 1.00311.25 C ATOM 147 CE3 TRP 20 20.690 38.304 5.538 1.00311.25 C ATOM 148 CZ2 TRP 20 20.823 41.018 6.266 1.00311.25 C ATOM 149 CZ3 TRP 20 21.856 38.861 6.017 1.00311.25 C ATOM 150 CH2 TRP 20 21.920 40.193 6.375 1.00311.25 C ATOM 151 C TRP 20 16.771 36.939 6.707 1.00311.25 C ATOM 152 O TRP 20 15.658 36.433 6.836 1.00311.25 O ATOM 153 N ALA 21 17.219 37.913 7.519 1.00219.44 N ATOM 154 CA ALA 21 16.410 38.312 8.629 1.00219.44 C ATOM 155 CB ALA 21 17.026 39.427 9.490 1.00219.44 C ATOM 156 C ALA 21 15.093 38.790 8.129 1.00219.44 C ATOM 157 O ALA 21 15.002 39.559 7.174 1.00219.44 O ATOM 158 N SER 22 14.033 38.300 8.794 1.00119.41 N ATOM 159 CA SER 22 12.672 38.628 8.522 1.00119.41 C ATOM 160 CB SER 22 12.103 37.921 7.280 1.00119.41 C ATOM 161 OG SER 22 10.762 38.321 7.039 1.00119.41 O ATOM 162 C SER 22 11.969 38.125 9.737 1.00119.41 C ATOM 163 O SER 22 12.578 38.033 10.802 1.00119.41 O ATOM 164 N LEU 23 10.672 37.794 9.643 1.00 55.58 N ATOM 165 CA LEU 23 10.068 37.324 10.850 1.00 55.58 C ATOM 166 CB LEU 23 8.575 37.671 10.971 1.00 55.58 C ATOM 167 CG LEU 23 8.321 39.190 10.989 1.00 55.58 C ATOM 168 CD1 LEU 23 6.848 39.505 11.296 1.00 55.58 C ATOM 169 CD2 LEU 23 9.303 39.913 11.925 1.00 55.58 C ATOM 170 C LEU 23 10.208 35.839 10.896 1.00 55.58 C ATOM 171 O LEU 23 9.549 35.114 10.152 1.00 55.58 O ATOM 172 N ALA 24 11.090 35.343 11.787 1.00 58.10 N ATOM 173 CA ALA 24 11.273 33.926 11.901 1.00 58.10 C ATOM 174 CB ALA 24 12.673 33.446 11.476 1.00 58.10 C ATOM 175 C ALA 24 11.093 33.559 13.338 1.00 58.10 C ATOM 176 O ALA 24 11.528 34.280 14.234 1.00 58.10 O ATOM 177 N ALA 25 10.426 32.413 13.585 1.00203.02 N ATOM 178 CA ALA 25 10.182 31.926 14.911 1.00203.02 C ATOM 179 CB ALA 25 11.454 31.469 15.646 1.00203.02 C ATOM 180 C ALA 25 9.568 33.034 15.693 1.00203.02 C ATOM 181 O ALA 25 9.886 33.223 16.865 1.00203.02 O ATOM 182 N ASN 26 8.662 33.797 15.057 1.00 93.68 N ATOM 183 CA ASN 26 8.067 34.892 15.754 1.00 93.68 C ATOM 184 CB ASN 26 8.281 36.244 15.051 1.00 93.68 C ATOM 185 CG ASN 26 7.898 37.359 16.014 1.00 93.68 C ATOM 186 OD1 ASN 26 6.728 37.531 16.353 1.00 93.68 O ATOM 187 ND2 ASN 26 8.915 38.141 16.468 1.00 93.68 N ATOM 188 C ASN 26 6.597 34.638 15.835 1.00 93.68 C ATOM 189 O ASN 26 6.008 34.025 14.946 1.00 93.68 O ATOM 190 N GLU 27 5.975 35.087 16.941 1.00108.00 N ATOM 191 CA GLU 27 4.566 34.916 17.134 1.00108.00 C ATOM 192 CB GLU 27 4.236 34.422 18.556 1.00108.00 C ATOM 193 CG GLU 27 2.751 34.192 18.847 1.00108.00 C ATOM 194 CD GLU 27 2.458 32.701 18.725 1.00108.00 C ATOM 195 OE1 GLU 27 3.431 31.908 18.620 1.00108.00 O ATOM 196 OE2 GLU 27 1.252 32.337 18.748 1.00108.00 O ATOM 197 C GLU 27 3.965 36.279 17.015 1.00108.00 C ATOM 198 O GLU 27 4.192 37.129 17.875 1.00108.00 O ATOM 199 N LEU 28 3.189 36.546 15.944 1.00139.71 N ATOM 200 CA LEU 28 2.606 37.852 15.897 1.00139.71 C ATOM 201 CB LEU 28 2.972 38.691 14.661 1.00139.71 C ATOM 202 CG LEU 28 2.445 40.134 14.768 1.00139.71 C ATOM 203 CD1 LEU 28 3.058 40.845 15.987 1.00139.71 C ATOM 204 CD2 LEU 28 2.649 40.920 13.463 1.00139.71 C ATOM 205 C LEU 28 1.131 37.675 15.934 1.00139.71 C ATOM 206 O LEU 28 0.560 36.899 15.168 1.00139.71 O ATOM 207 N ARG 29 0.471 38.385 16.865 1.00127.15 N ATOM 208 CA ARG 29 -0.948 38.258 16.966 1.00127.15 C ATOM 209 CB ARG 29 -1.410 37.658 18.306 1.00127.15 C ATOM 210 CG ARG 29 -2.902 37.318 18.349 1.00127.15 C ATOM 211 CD ARG 29 -3.398 36.866 19.728 1.00127.15 C ATOM 212 NE ARG 29 -4.160 37.994 20.335 1.00127.15 N ATOM 213 CZ ARG 29 -4.985 37.768 21.400 1.00127.15 C ATOM 214 NH1 ARG 29 -5.090 36.513 21.931 1.00127.15 N ATOM 215 NH2 ARG 29 -5.714 38.791 21.932 1.00127.15 N ATOM 216 C ARG 29 -1.503 39.636 16.909 1.00127.15 C ATOM 217 O ARG 29 -1.105 40.506 17.681 1.00127.15 O ATOM 218 N VAL 30 -2.431 39.886 15.972 1.00128.39 N ATOM 219 CA VAL 30 -3.022 41.184 15.961 1.00128.39 C ATOM 220 CB VAL 30 -2.700 41.964 14.713 1.00128.39 C ATOM 221 CG1 VAL 30 -1.209 42.364 14.784 1.00128.39 C ATOM 222 CG2 VAL 30 -2.983 41.082 13.489 1.00128.39 C ATOM 223 C VAL 30 -4.491 40.994 16.198 1.00128.39 C ATOM 224 O VAL 30 -5.160 40.229 15.514 1.00128.39 O ATOM 225 N THR 31 -4.990 41.582 17.302 1.00 73.76 N ATOM 226 CA THR 31 -6.365 41.518 17.713 1.00 73.76 C ATOM 227 CB THR 31 -6.530 41.854 19.164 1.00 73.76 C ATOM 228 OG1 THR 31 -6.163 43.210 19.388 1.00 73.76 O ATOM 229 CG2 THR 31 -5.619 40.931 19.991 1.00 73.76 C ATOM 230 C THR 31 -7.231 42.491 16.978 1.00 73.76 C ATOM 231 O THR 31 -8.371 42.201 16.631 1.00 73.76 O ATOM 232 N GLU 32 -6.675 43.687 16.718 1.00 82.86 N ATOM 233 CA GLU 32 -7.426 44.837 16.311 1.00 82.86 C ATOM 234 CB GLU 32 -6.643 46.143 16.527 1.00 82.86 C ATOM 235 CG GLU 32 -6.475 46.460 18.018 1.00 82.86 C ATOM 236 CD GLU 32 -5.490 47.609 18.174 1.00 82.86 C ATOM 237 OE1 GLU 32 -4.652 47.795 17.252 1.00 82.86 O ATOM 238 OE2 GLU 32 -5.555 48.307 19.221 1.00 82.86 O ATOM 239 C GLU 32 -7.947 44.784 14.918 1.00 82.86 C ATOM 240 O GLU 32 -7.606 43.921 14.109 1.00 82.86 O ATOM 241 N ARG 33 -8.809 45.787 14.625 1.00191.58 N ATOM 242 CA ARG 33 -9.521 46.008 13.398 1.00191.58 C ATOM 243 CB ARG 33 -10.052 47.458 13.316 1.00191.58 C ATOM 244 CG ARG 33 -10.896 47.858 14.532 1.00191.58 C ATOM 245 CD ARG 33 -11.769 49.105 14.345 1.00191.58 C ATOM 246 NE ARG 33 -10.896 50.276 14.038 1.00191.58 N ATOM 247 CZ ARG 33 -11.462 51.505 13.853 1.00191.58 C ATOM 248 NH1 ARG 33 -12.813 51.661 13.980 1.00191.58 N ATOM 249 NH2 ARG 33 -10.681 52.581 13.545 1.00191.58 N ATOM 250 C ARG 33 -8.538 45.764 12.304 1.00191.58 C ATOM 251 O ARG 33 -7.349 45.936 12.540 1.00191.58 O ATOM 252 N PRO 34 -9.032 45.438 11.115 1.00130.41 N ATOM 253 CA PRO 34 -8.228 44.851 10.059 1.00130.41 C ATOM 254 CD PRO 34 -10.120 46.232 10.567 1.00130.41 C ATOM 255 CB PRO 34 -8.912 45.238 8.746 1.00130.41 C ATOM 256 CG PRO 34 -9.754 46.471 9.101 1.00130.41 C ATOM 257 C PRO 34 -6.778 45.175 10.044 1.00130.41 C ATOM 258 O PRO 34 -6.344 46.116 9.384 1.00130.41 O ATOM 259 N PHE 35 -6.029 44.359 10.811 1.00136.80 N ATOM 260 CA PHE 35 -4.607 44.423 10.890 1.00136.80 C ATOM 261 CB PHE 35 -4.001 44.735 12.273 1.00136.80 C ATOM 262 CG PHE 35 -3.941 46.214 12.439 1.00136.80 C ATOM 263 CD1 PHE 35 -2.943 46.926 11.813 1.00136.80 C ATOM 264 CD2 PHE 35 -4.867 46.891 13.192 1.00136.80 C ATOM 265 CE1 PHE 35 -2.866 48.292 11.947 1.00136.80 C ATOM 266 CE2 PHE 35 -4.796 48.257 13.332 1.00136.80 C ATOM 267 CZ PHE 35 -3.794 48.961 12.709 1.00136.80 C ATOM 268 C PHE 35 -4.106 43.087 10.490 1.00136.80 C ATOM 269 O PHE 35 -4.457 42.065 11.080 1.00136.80 O ATOM 270 N TRP 36 -3.246 43.093 9.464 1.00209.24 N ATOM 271 CA TRP 36 -2.649 41.944 8.846 1.00209.24 C ATOM 272 CB TRP 36 -1.988 42.348 7.518 1.00209.24 C ATOM 273 CG TRP 36 -1.017 43.497 7.726 1.00209.24 C ATOM 274 CD2 TRP 36 -1.425 44.870 7.814 1.00209.24 C ATOM 275 CD1 TRP 36 0.333 43.488 7.930 1.00209.24 C ATOM 276 NE1 TRP 36 0.787 44.769 8.135 1.00209.24 N ATOM 277 CE2 TRP 36 -0.284 45.630 8.072 1.00209.24 C ATOM 278 CE3 TRP 36 -2.656 45.450 7.701 1.00209.24 C ATOM 279 CZ2 TRP 36 -0.358 46.984 8.225 1.00209.24 C ATOM 280 CZ3 TRP 36 -2.722 46.817 7.847 1.00209.24 C ATOM 281 CH2 TRP 36 -1.597 47.571 8.105 1.00209.24 C ATOM 282 C TRP 36 -1.538 41.428 9.710 1.00209.24 C ATOM 283 O TRP 36 -0.904 42.206 10.420 1.00209.24 O ATOM 284 N ILE 37 -1.280 40.096 9.714 1.00136.40 N ATOM 285 CA ILE 37 -0.126 39.683 10.473 1.00136.40 C ATOM 286 CB ILE 37 0.091 38.185 10.667 1.00136.40 C ATOM 287 CG1 ILE 37 0.552 37.456 9.386 1.00136.40 C ATOM 288 CG2 ILE 37 -1.210 37.623 11.260 1.00136.40 C ATOM 289 CD1 ILE 37 0.881 35.967 9.471 1.00136.40 C ATOM 290 C ILE 37 1.053 40.227 9.720 1.00136.40 C ATOM 291 O ILE 37 1.935 40.857 10.298 1.00136.40 O ATOM 292 N SER 38 1.077 40.017 8.385 1.00 63.58 N ATOM 293 CA SER 38 2.132 40.525 7.560 1.00 63.58 C ATOM 294 CB SER 38 3.184 39.477 7.159 1.00 63.58 C ATOM 295 OG SER 38 3.835 38.970 8.308 1.00 63.58 O ATOM 296 C SER 38 1.476 40.962 6.295 1.00 63.58 C ATOM 297 O SER 38 0.720 40.207 5.690 1.00 63.58 O ATOM 298 N SER 39 1.747 42.205 5.860 1.00 87.98 N ATOM 299 CA SER 39 1.106 42.622 4.654 1.00 87.98 C ATOM 300 CB SER 39 -0.069 43.592 4.871 1.00 87.98 C ATOM 301 OG SER 39 -0.641 43.942 3.621 1.00 87.98 O ATOM 302 C SER 39 2.123 43.330 3.834 1.00 87.98 C ATOM 303 O SER 39 2.856 44.188 4.323 1.00 87.98 O ATOM 304 N PHE 40 2.209 42.968 2.543 1.00125.28 N ATOM 305 CA PHE 40 3.132 43.696 1.739 1.00125.28 C ATOM 306 CB PHE 40 4.200 42.825 1.067 1.00125.28 C ATOM 307 CG PHE 40 5.004 42.391 2.245 1.00125.28 C ATOM 308 CD1 PHE 40 5.814 43.299 2.886 1.00125.28 C ATOM 309 CD2 PHE 40 4.909 41.115 2.750 1.00125.28 C ATOM 310 CE1 PHE 40 6.553 42.937 3.987 1.00125.28 C ATOM 311 CE2 PHE 40 5.647 40.743 3.850 1.00125.28 C ATOM 312 CZ PHE 40 6.471 41.651 4.467 1.00125.28 C ATOM 313 C PHE 40 2.310 44.460 0.762 1.00125.28 C ATOM 314 O PHE 40 1.401 43.920 0.136 1.00125.28 O ATOM 315 N ILE 41 2.626 45.757 0.603 1.00100.86 N ATOM 316 CA ILE 41 1.778 46.620 -0.164 1.00100.86 C ATOM 317 CB ILE 41 1.435 47.915 0.532 1.00100.86 C ATOM 318 CG1 ILE 41 0.284 48.645 -0.179 1.00100.86 C ATOM 319 CG2 ILE 41 2.715 48.759 0.632 1.00100.86 C ATOM 320 CD1 ILE 41 -0.213 49.869 0.588 1.00100.86 C ATOM 321 C ILE 41 2.456 46.994 -1.438 1.00100.86 C ATOM 322 O ILE 41 3.659 46.808 -1.613 1.00100.86 O ATOM 323 N GLY 42 1.648 47.521 -2.376 1.00 43.70 N ATOM 324 CA GLY 42 2.097 47.920 -3.674 1.00 43.70 C ATOM 325 C GLY 42 3.146 48.961 -3.495 1.00 43.70 C ATOM 326 O GLY 42 4.109 49.013 -4.259 1.00 43.70 O ATOM 327 N ARG 43 2.978 49.853 -2.501 1.00194.98 N ATOM 328 CA ARG 43 4.023 50.813 -2.319 1.00194.98 C ATOM 329 CB ARG 43 3.548 52.182 -1.811 1.00194.98 C ATOM 330 CG ARG 43 4.714 53.155 -1.639 1.00194.98 C ATOM 331 CD ARG 43 4.306 54.612 -1.424 1.00194.98 C ATOM 332 NE ARG 43 4.079 54.830 0.032 1.00194.98 N ATOM 333 CZ ARG 43 2.811 55.009 0.503 1.00194.98 C ATOM 334 NH1 ARG 43 1.761 54.995 -0.371 1.00194.98 N ATOM 335 NH2 ARG 43 2.589 55.214 1.834 1.00194.98 N ATOM 336 C ARG 43 4.980 50.263 -1.311 1.00194.98 C ATOM 337 O ARG 43 5.161 50.815 -0.227 1.00194.98 O ATOM 338 N SER 44 5.639 49.152 -1.675 1.00 77.98 N ATOM 339 CA SER 44 6.647 48.551 -0.862 1.00 77.98 C ATOM 340 CB SER 44 6.183 47.314 -0.073 1.00 77.98 C ATOM 341 OG SER 44 5.284 47.704 0.954 1.00 77.98 O ATOM 342 C SER 44 7.672 48.107 -1.838 1.00 77.98 C ATOM 343 O SER 44 7.394 48.030 -3.033 1.00 77.98 O ATOM 344 N LYS 45 8.898 47.820 -1.375 1.00 98.20 N ATOM 345 CA LYS 45 9.883 47.454 -2.344 1.00 98.20 C ATOM 346 CB LYS 45 11.336 47.654 -1.877 1.00 98.20 C ATOM 347 CG LYS 45 12.336 47.749 -3.033 1.00 98.20 C ATOM 348 CD LYS 45 13.714 48.271 -2.616 1.00 98.20 C ATOM 349 CE LYS 45 14.597 48.701 -3.792 1.00 98.20 C ATOM 350 NZ LYS 45 14.468 50.159 -4.027 1.00 98.20 N ATOM 351 C LYS 45 9.698 46.016 -2.692 1.00 98.20 C ATOM 352 O LYS 45 9.093 45.247 -1.945 1.00 98.20 O TER END