####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS337_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 19 - 35 4.96 25.98 LCS_AVERAGE: 33.01 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 1.62 20.65 LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.68 27.81 LCS_AVERAGE: 13.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 20 - 25 0.64 22.45 LCS_AVERAGE: 9.71 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 10 3 3 4 5 5 7 7 8 8 8 9 9 9 9 10 10 11 12 12 18 LCS_GDT V 3 V 3 4 6 11 3 3 4 5 5 6 6 6 8 8 9 9 9 9 10 12 15 16 16 18 LCS_GDT Q 4 Q 4 4 6 12 3 3 4 5 5 7 7 8 8 8 9 9 11 15 16 18 20 20 24 26 LCS_GDT G 5 G 5 4 6 13 3 3 4 5 5 7 8 10 12 13 13 14 15 16 17 18 22 24 29 30 LCS_GDT P 6 P 6 4 6 13 3 3 4 6 7 9 10 12 12 14 14 14 16 18 20 22 23 25 29 30 LCS_GDT W 7 W 7 4 6 13 3 4 5 6 7 8 10 12 12 14 14 14 16 18 18 21 23 25 29 30 LCS_GDT V 8 V 8 3 6 13 3 3 3 5 5 7 8 10 12 14 14 14 16 18 18 19 21 24 29 30 LCS_GDT G 9 G 9 3 6 13 3 3 3 5 6 7 9 12 12 14 14 14 15 18 18 19 21 24 29 30 LCS_GDT S 10 S 10 4 6 13 1 4 4 5 6 7 8 10 10 12 13 14 16 18 20 22 23 25 29 30 LCS_GDT S 11 S 11 4 4 13 4 6 6 6 7 9 9 10 10 11 13 14 16 18 20 22 23 25 29 30 LCS_GDT Y 12 Y 12 4 4 13 3 4 4 6 7 9 9 10 10 11 13 14 16 18 20 22 23 25 29 30 LCS_GDT V 13 V 13 4 4 13 3 4 4 4 4 6 8 10 10 11 13 14 16 18 20 22 23 25 29 30 LCS_GDT A 14 A 14 3 3 13 3 3 3 4 4 6 7 10 10 11 12 14 16 18 20 22 23 25 29 30 LCS_GDT E 15 E 15 3 5 13 3 3 4 5 5 5 7 8 8 9 11 13 15 18 20 22 23 25 29 30 LCS_GDT T 16 T 16 3 5 14 3 3 4 5 5 5 6 8 9 11 12 14 16 18 20 22 23 25 29 30 LCS_GDT G 17 G 17 3 5 14 3 3 4 5 5 5 6 8 9 11 12 13 14 15 17 21 23 25 29 30 LCS_GDT Q 18 Q 18 4 5 14 3 3 4 5 5 5 6 8 9 11 12 13 15 18 20 22 23 25 29 30 LCS_GDT N 19 N 19 4 5 17 3 3 4 5 5 6 7 8 9 11 13 15 16 18 20 22 23 25 29 30 LCS_GDT W 20 W 20 6 7 17 4 6 6 6 6 7 8 8 9 12 14 15 16 18 20 22 23 25 29 30 LCS_GDT A 21 A 21 6 7 17 4 6 6 6 6 7 8 8 9 11 14 15 16 18 20 22 23 25 29 30 LCS_GDT S 22 S 22 6 7 17 4 6 6 6 6 7 8 10 11 12 14 15 16 17 20 22 23 25 29 30 LCS_GDT L 23 L 23 6 7 17 4 6 6 6 6 8 8 10 11 12 14 15 16 18 20 22 23 25 29 30 LCS_GDT A 24 A 24 6 7 17 4 6 6 6 6 7 8 10 11 12 14 15 16 17 18 19 19 23 24 27 LCS_GDT A 25 A 25 6 7 17 3 6 6 6 6 8 9 10 11 12 14 15 16 17 18 19 19 23 24 27 LCS_GDT N 26 N 26 3 7 17 3 3 4 5 5 7 9 10 10 11 12 13 15 17 18 19 19 23 24 27 LCS_GDT E 27 E 27 3 6 17 3 3 4 5 6 8 9 10 11 12 14 15 16 17 18 19 19 20 21 24 LCS_GDT L 28 L 28 5 7 17 3 4 5 6 7 8 9 10 11 12 14 15 16 16 18 19 19 19 21 24 LCS_GDT R 29 R 29 5 7 17 3 4 5 6 7 8 9 10 11 12 14 15 16 17 18 19 19 20 22 24 LCS_GDT V 30 V 30 5 7 17 3 4 5 6 7 8 9 10 11 12 14 15 16 17 18 19 19 22 23 27 LCS_GDT T 31 T 31 5 7 17 4 4 5 6 7 8 9 10 11 12 14 15 16 18 18 21 22 25 29 30 LCS_GDT E 32 E 32 5 7 17 4 4 5 5 7 8 9 10 10 12 14 15 16 18 20 22 23 25 29 30 LCS_GDT R 33 R 33 4 7 17 4 4 5 6 7 9 10 12 12 14 14 15 16 18 20 22 23 25 29 30 LCS_GDT P 34 P 34 5 7 17 4 6 6 6 7 9 10 12 12 14 14 15 16 18 20 22 23 25 27 30 LCS_GDT F 35 F 35 5 6 17 4 6 6 6 7 9 10 12 12 14 14 14 16 18 20 22 23 25 29 30 LCS_GDT W 36 W 36 5 6 16 4 6 6 6 7 9 10 12 12 14 14 14 16 18 20 22 23 25 29 30 LCS_GDT I 37 I 37 5 6 13 4 6 6 6 7 9 10 12 12 14 14 14 16 18 20 22 23 25 29 30 LCS_GDT S 38 S 38 5 6 13 4 6 6 6 7 9 10 12 12 14 14 14 16 18 20 22 23 25 29 30 LCS_GDT S 39 S 39 3 6 13 0 3 4 4 7 8 10 12 12 14 14 14 15 18 20 22 23 25 29 30 LCS_GDT F 40 F 40 4 6 13 3 3 4 5 6 8 9 11 12 14 14 14 15 16 17 18 20 24 29 30 LCS_GDT I 41 I 41 4 6 13 3 3 4 5 6 7 10 12 12 14 14 14 15 16 17 18 22 24 29 30 LCS_GDT G 42 G 42 4 6 13 3 4 4 5 6 7 10 12 12 14 14 14 15 16 17 18 20 20 27 28 LCS_GDT R 43 R 43 4 6 13 3 4 4 5 5 6 8 8 10 13 13 14 15 16 17 18 20 20 20 21 LCS_GDT S 44 S 44 4 6 13 3 4 4 5 6 7 8 10 12 13 13 14 15 16 17 18 20 20 20 21 LCS_GDT K 45 K 45 4 6 12 3 4 4 5 6 6 8 8 9 10 10 10 11 12 14 17 17 17 19 19 LCS_AVERAGE LCS_A: 18.78 ( 9.71 13.64 33.01 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 6 7 9 10 12 12 14 14 15 16 18 20 22 23 25 29 30 GDT PERCENT_AT 9.09 13.64 13.64 13.64 15.91 20.45 22.73 27.27 27.27 31.82 31.82 34.09 36.36 40.91 45.45 50.00 52.27 56.82 65.91 68.18 GDT RMS_LOCAL 0.26 0.45 0.45 0.45 1.59 2.05 2.32 2.70 2.70 3.09 3.09 4.47 4.65 4.95 5.68 6.07 6.26 6.62 7.35 7.41 GDT RMS_ALL_AT 14.88 14.71 14.71 14.71 14.11 14.28 16.51 16.24 16.24 16.37 16.37 26.93 13.86 14.13 13.29 13.03 13.02 12.90 12.38 12.49 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.794 0 0.039 0.049 21.343 0.000 0.000 - LGA V 3 V 3 16.686 0 0.086 0.085 20.326 0.000 0.000 16.099 LGA Q 4 Q 4 10.320 0 0.049 1.100 12.213 0.000 0.000 9.101 LGA G 5 G 5 7.386 0 0.136 0.136 8.796 1.818 1.818 - LGA P 6 P 6 2.081 0 0.729 0.643 4.104 31.364 28.571 3.313 LGA W 7 W 7 0.981 0 0.422 1.189 11.823 66.364 20.260 11.823 LGA V 8 V 8 4.921 0 0.657 1.484 9.166 10.455 5.974 9.166 LGA G 9 G 9 3.544 0 0.534 0.534 7.824 5.455 5.455 - LGA S 10 S 10 9.632 0 0.672 0.707 12.518 0.000 0.000 10.770 LGA S 11 S 11 14.138 0 0.624 0.965 17.302 0.000 0.000 15.086 LGA Y 12 Y 12 17.040 0 0.450 1.062 18.654 0.000 0.000 17.939 LGA V 13 V 13 15.964 0 0.596 0.921 20.087 0.000 0.000 16.408 LGA A 14 A 14 21.579 0 0.615 0.584 22.985 0.000 0.000 - LGA E 15 E 15 20.733 0 0.063 0.811 22.100 0.000 0.000 18.633 LGA T 16 T 16 22.642 0 0.327 1.308 22.940 0.000 0.000 21.546 LGA G 17 G 17 23.583 0 0.193 0.193 24.251 0.000 0.000 - LGA Q 18 Q 18 23.789 0 0.625 1.695 27.278 0.000 0.000 27.170 LGA N 19 N 19 21.270 0 0.100 1.299 23.483 0.000 0.000 23.483 LGA W 20 W 20 16.557 0 0.618 1.076 18.166 0.000 0.000 10.131 LGA A 21 A 21 17.453 0 0.081 0.078 18.762 0.000 0.000 - LGA S 22 S 22 18.114 0 0.030 0.615 19.719 0.000 0.000 19.189 LGA L 23 L 23 19.397 0 0.084 0.086 21.790 0.000 0.000 17.022 LGA A 24 A 24 21.394 0 0.616 0.582 21.955 0.000 0.000 - LGA A 25 A 25 21.648 0 0.616 0.608 23.642 0.000 0.000 - LGA N 26 N 26 24.188 0 0.074 0.173 27.786 0.000 0.000 20.195 LGA E 27 E 27 30.771 0 0.659 0.992 36.569 0.000 0.000 35.351 LGA L 28 L 28 30.699 0 0.677 0.962 35.735 0.000 0.000 33.128 LGA R 29 R 29 27.295 0 0.051 1.372 35.090 0.000 0.000 35.090 LGA V 30 V 30 20.813 0 0.141 0.171 23.381 0.000 0.000 18.423 LGA T 31 T 31 15.066 0 0.665 0.968 16.799 0.000 0.000 16.750 LGA E 32 E 32 8.959 0 0.099 1.410 12.733 0.000 0.000 12.733 LGA R 33 R 33 3.423 0 0.079 1.107 12.690 41.818 15.372 12.690 LGA P 34 P 34 1.360 0 0.103 0.165 2.727 74.091 61.039 2.282 LGA F 35 F 35 2.419 0 0.017 1.262 3.755 48.182 40.496 3.458 LGA W 36 W 36 1.872 0 0.101 1.155 12.187 45.455 16.104 12.187 LGA I 37 I 37 2.400 0 0.163 1.085 8.109 42.273 25.909 8.109 LGA S 38 S 38 1.754 0 0.677 0.833 4.860 55.000 40.000 4.860 LGA S 39 S 39 2.711 0 0.700 0.821 4.657 22.273 18.182 4.657 LGA F 40 F 40 5.178 0 0.669 0.770 11.198 2.727 0.992 11.198 LGA I 41 I 41 3.995 0 0.128 1.048 10.444 9.545 4.773 10.444 LGA G 42 G 42 3.792 0 0.737 0.737 4.986 5.000 5.000 - LGA R 43 R 43 9.531 0 0.077 1.114 17.517 0.000 0.000 17.517 LGA S 44 S 44 12.537 0 0.047 0.758 16.644 0.000 0.000 13.038 LGA K 45 K 45 18.692 0 0.085 0.954 21.945 0.000 0.000 21.945 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.821 11.711 12.857 10.496 6.590 2.234 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.70 26.136 22.199 0.429 LGA_LOCAL RMSD: 2.697 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.235 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.821 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.149796 * X + -0.473886 * Y + -0.867752 * Z + 134.487076 Y_new = 0.862851 * X + -0.365868 * Y + 0.348753 * Z + 10.882774 Z_new = -0.482752 * X + -0.800983 * Y + 0.354087 * Z + 38.543983 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.398904 0.503794 -1.154560 [DEG: 80.1513 28.8653 -66.1514 ] ZXZ: -1.952943 1.208859 -2.599191 [DEG: -111.8954 69.2625 -148.9227 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS337_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.70 22.199 11.82 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS337_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 16.731 27.542 -4.678 1.00174.63 N ATOM 10 CA ALA 2 16.397 28.859 -5.119 1.00174.63 C ATOM 11 CB ALA 2 14.969 28.983 -5.681 1.00174.63 C ATOM 12 C ALA 2 16.495 29.759 -3.936 1.00174.63 C ATOM 13 O ALA 2 16.356 29.324 -2.795 1.00174.63 O ATOM 14 N VAL 3 16.766 31.052 -4.190 1.00 76.09 N ATOM 15 CA VAL 3 16.878 31.981 -3.110 1.00 76.09 C ATOM 16 CB VAL 3 17.322 33.350 -3.536 1.00 76.09 C ATOM 17 CG1 VAL 3 17.303 34.275 -2.307 1.00 76.09 C ATOM 18 CG2 VAL 3 18.700 33.231 -4.210 1.00 76.09 C ATOM 19 C VAL 3 15.517 32.116 -2.522 1.00 76.09 C ATOM 20 O VAL 3 14.513 32.045 -3.231 1.00 76.09 O ATOM 21 N GLN 4 15.448 32.293 -1.192 1.00219.20 N ATOM 22 CA GLN 4 14.167 32.409 -0.571 1.00219.20 C ATOM 23 CB GLN 4 14.218 32.446 0.968 1.00219.20 C ATOM 24 CG GLN 4 14.653 31.128 1.618 1.00219.20 C ATOM 25 CD GLN 4 16.158 30.959 1.448 1.00219.20 C ATOM 26 OE1 GLN 4 16.641 30.573 0.385 1.00219.20 O ATOM 27 NE2 GLN 4 16.923 31.249 2.534 1.00219.20 N ATOM 28 C GLN 4 13.565 33.688 -1.042 1.00219.20 C ATOM 29 O GLN 4 14.224 34.725 -1.081 1.00219.20 O ATOM 30 N GLY 5 12.282 33.626 -1.439 1.00 82.13 N ATOM 31 CA GLY 5 11.599 34.790 -1.914 1.00 82.13 C ATOM 32 C GLY 5 10.777 35.314 -0.788 1.00 82.13 C ATOM 33 O GLY 5 11.070 35.103 0.388 1.00 82.13 O ATOM 34 N PRO 6 9.729 35.987 -1.159 1.00 82.69 N ATOM 35 CA PRO 6 8.835 36.580 -0.208 1.00 82.69 C ATOM 36 CD PRO 6 9.085 35.747 -2.441 1.00 82.69 C ATOM 37 CB PRO 6 7.684 37.139 -1.039 1.00 82.69 C ATOM 38 CG PRO 6 7.622 36.174 -2.237 1.00 82.69 C ATOM 39 C PRO 6 8.359 35.481 0.680 1.00 82.69 C ATOM 40 O PRO 6 8.435 34.319 0.283 1.00 82.69 O ATOM 41 N TRP 7 7.885 35.823 1.892 1.00244.91 N ATOM 42 CA TRP 7 7.426 34.808 2.789 1.00244.91 C ATOM 43 CB TRP 7 6.829 35.368 4.094 1.00244.91 C ATOM 44 CG TRP 7 6.363 34.317 5.075 1.00244.91 C ATOM 45 CD2 TRP 7 7.193 33.761 6.104 1.00244.91 C ATOM 46 CD1 TRP 7 5.141 33.722 5.199 1.00244.91 C ATOM 47 NE1 TRP 7 5.160 32.826 6.241 1.00244.91 N ATOM 48 CE2 TRP 7 6.418 32.841 6.808 1.00244.91 C ATOM 49 CE3 TRP 7 8.496 34.000 6.438 1.00244.91 C ATOM 50 CZ2 TRP 7 6.936 32.142 7.861 1.00244.91 C ATOM 51 CZ3 TRP 7 9.016 33.293 7.500 1.00244.91 C ATOM 52 CH2 TRP 7 8.250 32.381 8.197 1.00244.91 C ATOM 53 C TRP 7 6.355 34.071 2.060 1.00244.91 C ATOM 54 O TRP 7 5.619 34.649 1.262 1.00244.91 O ATOM 55 N VAL 8 6.261 32.751 2.301 1.00118.83 N ATOM 56 CA VAL 8 5.305 31.967 1.581 1.00118.83 C ATOM 57 CB VAL 8 5.378 30.500 1.892 1.00118.83 C ATOM 58 CG1 VAL 8 6.753 29.975 1.443 1.00118.83 C ATOM 59 CG2 VAL 8 5.094 30.302 3.390 1.00118.83 C ATOM 60 C VAL 8 3.941 32.441 1.944 1.00118.83 C ATOM 61 O VAL 8 3.659 32.763 3.097 1.00118.83 O ATOM 62 N GLY 9 3.060 32.515 0.931 1.00 96.87 N ATOM 63 CA GLY 9 1.713 32.946 1.139 1.00 96.87 C ATOM 64 C GLY 9 1.076 32.980 -0.207 1.00 96.87 C ATOM 65 O GLY 9 1.759 32.915 -1.228 1.00 96.87 O ATOM 66 N SER 10 -0.264 33.085 -0.248 1.00152.43 N ATOM 67 CA SER 10 -0.908 33.115 -1.524 1.00152.43 C ATOM 68 CB SER 10 -2.438 32.970 -1.446 1.00152.43 C ATOM 69 OG SER 10 -2.780 31.697 -0.916 1.00152.43 O ATOM 70 C SER 10 -0.607 34.439 -2.137 1.00152.43 C ATOM 71 O SER 10 -0.539 35.455 -1.446 1.00152.43 O ATOM 72 N SER 11 -0.393 34.453 -3.465 1.00175.95 N ATOM 73 CA SER 11 -0.133 35.690 -4.133 1.00175.95 C ATOM 74 CB SER 11 0.560 35.530 -5.497 1.00175.95 C ATOM 75 OG SER 11 1.856 34.975 -5.327 1.00175.95 O ATOM 76 C SER 11 -1.459 36.319 -4.381 1.00175.95 C ATOM 77 O SER 11 -2.478 35.629 -4.394 1.00175.95 O ATOM 78 N TYR 12 -1.462 37.652 -4.596 1.00288.90 N ATOM 79 CA TYR 12 -2.667 38.392 -4.840 1.00288.90 C ATOM 80 CB TYR 12 -3.269 38.120 -6.233 1.00288.90 C ATOM 81 CG TYR 12 -4.456 39.003 -6.420 1.00288.90 C ATOM 82 CD1 TYR 12 -4.288 40.351 -6.637 1.00288.90 C ATOM 83 CD2 TYR 12 -5.733 38.487 -6.409 1.00288.90 C ATOM 84 CE1 TYR 12 -5.375 41.174 -6.813 1.00288.90 C ATOM 85 CE2 TYR 12 -6.824 39.304 -6.585 1.00288.90 C ATOM 86 CZ TYR 12 -6.646 40.651 -6.785 1.00288.90 C ATOM 87 OH TYR 12 -7.763 41.493 -6.965 1.00288.90 O ATOM 88 C TYR 12 -3.649 38.015 -3.779 1.00288.90 C ATOM 89 O TYR 12 -4.726 37.495 -4.064 1.00288.90 O ATOM 90 N VAL 13 -3.275 38.242 -2.506 1.00125.43 N ATOM 91 CA VAL 13 -4.129 37.850 -1.427 1.00125.43 C ATOM 92 CB VAL 13 -3.453 37.881 -0.086 1.00125.43 C ATOM 93 CG1 VAL 13 -3.078 39.336 0.242 1.00125.43 C ATOM 94 CG2 VAL 13 -4.391 37.237 0.950 1.00125.43 C ATOM 95 C VAL 13 -5.291 38.782 -1.360 1.00125.43 C ATOM 96 O VAL 13 -5.139 39.999 -1.464 1.00125.43 O ATOM 97 N ALA 14 -6.501 38.210 -1.204 1.00 39.09 N ATOM 98 CA ALA 14 -7.663 39.031 -1.046 1.00 39.09 C ATOM 99 CB ALA 14 -8.876 38.556 -1.863 1.00 39.09 C ATOM 100 C ALA 14 -8.028 38.926 0.396 1.00 39.09 C ATOM 101 O ALA 14 -8.432 37.870 0.878 1.00 39.09 O ATOM 102 N GLU 15 -7.858 40.040 1.124 1.00101.69 N ATOM 103 CA GLU 15 -8.127 40.095 2.528 1.00101.69 C ATOM 104 CB GLU 15 -7.452 41.284 3.215 1.00101.69 C ATOM 105 CG GLU 15 -5.929 41.199 3.137 1.00101.69 C ATOM 106 CD GLU 15 -5.493 39.930 3.856 1.00101.69 C ATOM 107 OE1 GLU 15 -5.839 38.822 3.365 1.00101.69 O ATOM 108 OE2 GLU 15 -4.809 40.053 4.907 1.00101.69 O ATOM 109 C GLU 15 -9.600 40.126 2.792 1.00101.69 C ATOM 110 O GLU 15 -10.038 39.681 3.850 1.00101.69 O ATOM 111 N THR 16 -10.390 40.695 1.857 1.00158.98 N ATOM 112 CA THR 16 -11.819 40.826 1.991 1.00158.98 C ATOM 113 CB THR 16 -12.604 39.551 1.792 1.00158.98 C ATOM 114 OG1 THR 16 -13.987 39.856 1.696 1.00158.98 O ATOM 115 CG2 THR 16 -12.362 38.565 2.946 1.00158.98 C ATOM 116 C THR 16 -12.123 41.441 3.319 1.00158.98 C ATOM 117 O THR 16 -12.991 40.989 4.063 1.00158.98 O ATOM 118 N GLY 17 -11.390 42.527 3.626 1.00 42.93 N ATOM 119 CA GLY 17 -11.501 43.271 4.847 1.00 42.93 C ATOM 120 C GLY 17 -12.840 43.934 4.936 1.00 42.93 C ATOM 121 O GLY 17 -13.385 44.096 6.026 1.00 42.93 O ATOM 122 N GLN 18 -13.406 44.336 3.784 1.00119.80 N ATOM 123 CA GLN 18 -14.601 45.131 3.745 1.00119.80 C ATOM 124 CB GLN 18 -15.050 45.443 2.305 1.00119.80 C ATOM 125 CG GLN 18 -16.152 46.502 2.200 1.00119.80 C ATOM 126 CD GLN 18 -17.499 45.867 2.518 1.00119.80 C ATOM 127 OE1 GLN 18 -18.432 46.550 2.941 1.00119.80 O ATOM 128 NE2 GLN 18 -17.617 44.531 2.297 1.00119.80 N ATOM 129 C GLN 18 -15.714 44.422 4.439 1.00119.80 C ATOM 130 O GLN 18 -16.526 45.057 5.111 1.00119.80 O ATOM 131 N ASN 19 -15.784 43.086 4.307 1.00 69.38 N ATOM 132 CA ASN 19 -16.877 42.378 4.904 1.00 69.38 C ATOM 133 CB ASN 19 -16.773 40.855 4.708 1.00 69.38 C ATOM 134 CG ASN 19 -18.090 40.226 5.138 1.00 69.38 C ATOM 135 OD1 ASN 19 -18.631 40.545 6.196 1.00 69.38 O ATOM 136 ND2 ASN 19 -18.627 39.307 4.291 1.00 69.38 N ATOM 137 C ASN 19 -16.870 42.652 6.373 1.00 69.38 C ATOM 138 O ASN 19 -17.905 42.966 6.957 1.00 69.38 O ATOM 139 N TRP 20 -15.688 42.567 7.006 1.00101.17 N ATOM 140 CA TRP 20 -15.574 42.798 8.415 1.00101.17 C ATOM 141 CB TRP 20 -14.202 42.396 8.965 1.00101.17 C ATOM 142 CG TRP 20 -14.070 40.903 9.151 1.00101.17 C ATOM 143 CD2 TRP 20 -13.991 39.947 8.080 1.00101.17 C ATOM 144 CD1 TRP 20 -14.067 40.183 10.309 1.00101.17 C ATOM 145 NE1 TRP 20 -13.979 38.840 10.031 1.00101.17 N ATOM 146 CE2 TRP 20 -13.936 38.680 8.662 1.00101.17 C ATOM 147 CE3 TRP 20 -13.975 40.109 6.724 1.00101.17 C ATOM 148 CZ2 TRP 20 -13.864 37.553 7.893 1.00101.17 C ATOM 149 CZ3 TRP 20 -13.893 38.971 5.954 1.00101.17 C ATOM 150 CH2 TRP 20 -13.838 37.717 6.526 1.00101.17 C ATOM 151 C TRP 20 -15.867 44.226 8.744 1.00101.17 C ATOM 152 O TRP 20 -16.478 44.512 9.772 1.00101.17 O ATOM 153 N ALA 21 -15.451 45.168 7.879 1.00 36.21 N ATOM 154 CA ALA 21 -15.663 46.550 8.194 1.00 36.21 C ATOM 155 CB ALA 21 -15.191 47.489 7.072 1.00 36.21 C ATOM 156 C ALA 21 -17.131 46.772 8.360 1.00 36.21 C ATOM 157 O ALA 21 -17.568 47.408 9.319 1.00 36.21 O ATOM 158 N SER 22 -17.940 46.238 7.430 1.00 69.23 N ATOM 159 CA SER 22 -19.358 46.418 7.520 1.00 69.23 C ATOM 160 CB SER 22 -20.106 45.923 6.270 1.00 69.23 C ATOM 161 OG SER 22 -19.760 46.719 5.147 1.00 69.23 O ATOM 162 C SER 22 -19.880 45.636 8.683 1.00 69.23 C ATOM 163 O SER 22 -20.796 46.076 9.376 1.00 69.23 O ATOM 164 N LEU 23 -19.287 44.457 8.942 1.00 69.81 N ATOM 165 CA LEU 23 -19.810 43.585 9.952 1.00 69.81 C ATOM 166 CB LEU 23 -19.034 42.263 10.065 1.00 69.81 C ATOM 167 CG LEU 23 -19.157 41.377 8.812 1.00 69.81 C ATOM 168 CD1 LEU 23 -18.370 40.066 8.969 1.00 69.81 C ATOM 169 CD2 LEU 23 -20.629 41.152 8.431 1.00 69.81 C ATOM 170 C LEU 23 -19.771 44.245 11.289 1.00 69.81 C ATOM 171 O LEU 23 -20.770 44.245 12.006 1.00 69.81 O ATOM 172 N ALA 24 -18.633 44.848 11.674 1.00228.30 N ATOM 173 CA ALA 24 -18.656 45.424 12.983 1.00228.30 C ATOM 174 CB ALA 24 -17.436 45.065 13.845 1.00228.30 C ATOM 175 C ALA 24 -18.691 46.902 12.840 1.00228.30 C ATOM 176 O ALA 24 -17.821 47.505 12.215 1.00228.30 O ATOM 177 N ALA 25 -19.733 47.525 13.418 1.00282.97 N ATOM 178 CA ALA 25 -19.820 48.947 13.360 1.00282.97 C ATOM 179 CB ALA 25 -20.311 49.451 11.995 1.00282.97 C ATOM 180 C ALA 25 -20.833 49.361 14.373 1.00282.97 C ATOM 181 O ALA 25 -21.860 48.704 14.538 1.00282.97 O ATOM 182 N ASN 26 -20.558 50.458 15.099 1.00 84.02 N ATOM 183 CA ASN 26 -21.535 50.939 16.026 1.00 84.02 C ATOM 184 CB ASN 26 -21.034 52.122 16.872 1.00 84.02 C ATOM 185 CG ASN 26 -19.952 51.604 17.809 1.00 84.02 C ATOM 186 OD1 ASN 26 -20.034 50.487 18.317 1.00 84.02 O ATOM 187 ND2 ASN 26 -18.907 52.441 18.046 1.00 84.02 N ATOM 188 C ASN 26 -22.664 51.433 15.188 1.00 84.02 C ATOM 189 O ASN 26 -23.833 51.163 15.458 1.00 84.02 O ATOM 190 N GLU 27 -22.305 52.164 14.118 1.00208.48 N ATOM 191 CA GLU 27 -23.262 52.712 13.209 1.00208.48 C ATOM 192 CB GLU 27 -23.434 54.235 13.323 1.00208.48 C ATOM 193 CG GLU 27 -24.091 54.681 14.629 1.00208.48 C ATOM 194 CD GLU 27 -24.196 56.198 14.600 1.00208.48 C ATOM 195 OE1 GLU 27 -23.760 56.801 13.583 1.00208.48 O ATOM 196 OE2 GLU 27 -24.715 56.775 15.593 1.00208.48 O ATOM 197 C GLU 27 -22.736 52.436 11.843 1.00208.48 C ATOM 198 O GLU 27 -21.700 51.795 11.681 1.00208.48 O ATOM 199 N LEU 28 -23.454 52.911 10.812 1.00243.19 N ATOM 200 CA LEU 28 -23.020 52.670 9.472 1.00243.19 C ATOM 201 CB LEU 28 -24.030 53.122 8.405 1.00243.19 C ATOM 202 CG LEU 28 -25.364 52.354 8.455 1.00243.19 C ATOM 203 CD1 LEU 28 -26.103 52.605 9.779 1.00243.19 C ATOM 204 CD2 LEU 28 -26.230 52.658 7.222 1.00243.19 C ATOM 205 C LEU 28 -21.761 53.442 9.260 1.00243.19 C ATOM 206 O LEU 28 -21.459 54.385 9.989 1.00243.19 O ATOM 207 N ARG 29 -20.980 53.024 8.248 1.00332.23 N ATOM 208 CA ARG 29 -19.744 53.668 7.919 1.00332.23 C ATOM 209 CB ARG 29 -19.906 55.170 7.630 1.00332.23 C ATOM 210 CG ARG 29 -18.639 55.822 7.073 1.00332.23 C ATOM 211 CD ARG 29 -18.254 55.296 5.690 1.00332.23 C ATOM 212 NE ARG 29 -19.441 55.465 4.807 1.00332.23 N ATOM 213 CZ ARG 29 -19.420 54.989 3.527 1.00332.23 C ATOM 214 NH1 ARG 29 -18.305 54.367 3.048 1.00332.23 N ATOM 215 NH2 ARG 29 -20.517 55.135 2.729 1.00332.23 N ATOM 216 C ARG 29 -18.793 53.508 9.059 1.00332.23 C ATOM 217 O ARG 29 -17.912 54.340 9.267 1.00332.23 O ATOM 218 N VAL 30 -18.944 52.415 9.829 1.00 67.95 N ATOM 219 CA VAL 30 -18.017 52.154 10.887 1.00 67.95 C ATOM 220 CB VAL 30 -18.663 51.883 12.213 1.00 67.95 C ATOM 221 CG1 VAL 30 -17.568 51.494 13.221 1.00 67.95 C ATOM 222 CG2 VAL 30 -19.481 53.119 12.624 1.00 67.95 C ATOM 223 C VAL 30 -17.285 50.921 10.474 1.00 67.95 C ATOM 224 O VAL 30 -17.870 50.017 9.880 1.00 67.95 O ATOM 225 N THR 31 -15.971 50.855 10.756 1.00147.05 N ATOM 226 CA THR 31 -15.241 49.713 10.299 1.00147.05 C ATOM 227 CB THR 31 -14.119 50.070 9.367 1.00147.05 C ATOM 228 OG1 THR 31 -14.625 50.723 8.213 1.00147.05 O ATOM 229 CG2 THR 31 -13.361 48.789 8.981 1.00147.05 C ATOM 230 C THR 31 -14.615 49.008 11.455 1.00147.05 C ATOM 231 O THR 31 -13.988 49.625 12.315 1.00147.05 O ATOM 232 N GLU 32 -14.799 47.674 11.506 1.00136.01 N ATOM 233 CA GLU 32 -14.117 46.879 12.480 1.00136.01 C ATOM 234 CB GLU 32 -14.745 45.498 12.721 1.00136.01 C ATOM 235 CG GLU 32 -13.990 44.663 13.758 1.00136.01 C ATOM 236 CD GLU 32 -14.232 45.270 15.131 1.00136.01 C ATOM 237 OE1 GLU 32 -15.238 46.014 15.278 1.00136.01 O ATOM 238 OE2 GLU 32 -13.416 44.995 16.051 1.00136.01 O ATOM 239 C GLU 32 -12.765 46.646 11.898 1.00136.01 C ATOM 240 O GLU 32 -12.609 46.663 10.678 1.00136.01 O ATOM 241 N ARG 33 -11.741 46.440 12.747 1.00 93.63 N ATOM 242 CA ARG 33 -10.434 46.248 12.191 1.00 93.63 C ATOM 243 CB ARG 33 -9.364 47.165 12.811 1.00 93.63 C ATOM 244 CG ARG 33 -9.543 48.643 12.461 1.00 93.63 C ATOM 245 CD ARG 33 -8.340 49.512 12.839 1.00 93.63 C ATOM 246 NE ARG 33 -8.239 49.533 14.326 1.00 93.63 N ATOM 247 CZ ARG 33 -8.817 50.545 15.036 1.00 93.63 C ATOM 248 NH1 ARG 33 -9.475 51.548 14.382 1.00 93.63 N ATOM 249 NH2 ARG 33 -8.736 50.557 16.398 1.00 93.63 N ATOM 250 C ARG 33 -9.999 44.842 12.448 1.00 93.63 C ATOM 251 O ARG 33 -9.762 44.430 13.582 1.00 93.63 O ATOM 252 N PRO 34 -9.926 44.097 11.385 1.00168.21 N ATOM 253 CA PRO 34 -9.448 42.747 11.516 1.00168.21 C ATOM 254 CD PRO 34 -11.045 44.165 10.460 1.00168.21 C ATOM 255 CB PRO 34 -10.210 41.896 10.511 1.00168.21 C ATOM 256 CG PRO 34 -11.479 42.710 10.238 1.00168.21 C ATOM 257 C PRO 34 -7.963 42.709 11.336 1.00168.21 C ATOM 258 O PRO 34 -7.333 43.764 11.307 1.00168.21 O ATOM 259 N PHE 35 -7.394 41.498 11.203 1.00121.32 N ATOM 260 CA PHE 35 -5.981 41.270 11.092 1.00121.32 C ATOM 261 CB PHE 35 -5.662 39.760 11.046 1.00121.32 C ATOM 262 CG PHE 35 -4.192 39.529 11.097 1.00121.32 C ATOM 263 CD1 PHE 35 -3.477 39.787 12.244 1.00121.32 C ATOM 264 CD2 PHE 35 -3.536 39.008 10.008 1.00121.32 C ATOM 265 CE1 PHE 35 -2.120 39.562 12.288 1.00121.32 C ATOM 266 CE2 PHE 35 -2.181 38.780 10.045 1.00121.32 C ATOM 267 CZ PHE 35 -1.469 39.061 11.186 1.00121.32 C ATOM 268 C PHE 35 -5.432 41.970 9.878 1.00121.32 C ATOM 269 O PHE 35 -6.123 42.183 8.882 1.00121.32 O ATOM 270 N TRP 36 -4.150 42.387 9.984 1.00108.36 N ATOM 271 CA TRP 36 -3.415 43.117 8.985 1.00108.36 C ATOM 272 CB TRP 36 -2.193 43.819 9.589 1.00108.36 C ATOM 273 CG TRP 36 -2.577 44.805 10.663 1.00108.36 C ATOM 274 CD2 TRP 36 -2.912 44.415 12.004 1.00108.36 C ATOM 275 CD1 TRP 36 -2.720 46.160 10.606 1.00108.36 C ATOM 276 NE1 TRP 36 -3.119 46.641 11.830 1.00108.36 N ATOM 277 CE2 TRP 36 -3.243 45.576 12.701 1.00108.36 C ATOM 278 CE3 TRP 36 -2.946 43.188 12.603 1.00108.36 C ATOM 279 CZ2 TRP 36 -3.615 45.528 14.014 1.00108.36 C ATOM 280 CZ3 TRP 36 -3.316 43.143 13.929 1.00108.36 C ATOM 281 CH2 TRP 36 -3.644 44.291 14.620 1.00108.36 C ATOM 282 C TRP 36 -2.917 42.136 7.971 1.00108.36 C ATOM 283 O TRP 36 -2.713 40.965 8.280 1.00108.36 O ATOM 284 N ILE 37 -2.729 42.583 6.714 1.00 62.16 N ATOM 285 CA ILE 37 -2.314 41.647 5.707 1.00 62.16 C ATOM 286 CB ILE 37 -2.237 42.248 4.337 1.00 62.16 C ATOM 287 CG1 ILE 37 -3.595 42.816 3.911 1.00 62.16 C ATOM 288 CG2 ILE 37 -1.696 41.164 3.390 1.00 62.16 C ATOM 289 CD1 ILE 37 -3.529 43.628 2.619 1.00 62.16 C ATOM 290 C ILE 37 -0.936 41.146 5.987 1.00 62.16 C ATOM 291 O ILE 37 -0.718 39.940 6.092 1.00 62.16 O ATOM 292 N SER 38 0.042 42.057 6.150 1.00 94.10 N ATOM 293 CA SER 38 1.363 41.543 6.349 1.00 94.10 C ATOM 294 CB SER 38 2.083 41.172 5.042 1.00 94.10 C ATOM 295 OG SER 38 3.384 40.677 5.325 1.00 94.10 O ATOM 296 C SER 38 2.201 42.562 7.038 1.00 94.10 C ATOM 297 O SER 38 1.994 43.767 6.904 1.00 94.10 O ATOM 298 N SER 39 3.183 42.069 7.817 1.00 75.44 N ATOM 299 CA SER 39 4.076 42.961 8.485 1.00 75.44 C ATOM 300 CB SER 39 3.548 43.446 9.844 1.00 75.44 C ATOM 301 OG SER 39 4.486 44.322 10.452 1.00 75.44 O ATOM 302 C SER 39 5.337 42.208 8.751 1.00 75.44 C ATOM 303 O SER 39 5.323 40.999 8.975 1.00 75.44 O ATOM 304 N PHE 40 6.479 42.919 8.710 1.00109.87 N ATOM 305 CA PHE 40 7.716 42.298 9.065 1.00109.87 C ATOM 306 CB PHE 40 8.855 42.478 8.044 1.00109.87 C ATOM 307 CG PHE 40 8.624 41.478 6.960 1.00109.87 C ATOM 308 CD1 PHE 40 7.695 41.696 5.969 1.00109.87 C ATOM 309 CD2 PHE 40 9.351 40.309 6.943 1.00109.87 C ATOM 310 CE1 PHE 40 7.496 40.760 4.979 1.00109.87 C ATOM 311 CE2 PHE 40 9.157 39.370 5.957 1.00109.87 C ATOM 312 CZ PHE 40 8.225 39.595 4.972 1.00109.87 C ATOM 313 C PHE 40 8.111 42.903 10.366 1.00109.87 C ATOM 314 O PHE 40 7.994 44.111 10.565 1.00109.87 O ATOM 315 N ILE 41 8.580 42.057 11.299 1.00103.96 N ATOM 316 CA ILE 41 8.889 42.541 12.607 1.00103.96 C ATOM 317 CB ILE 41 8.145 41.831 13.697 1.00103.96 C ATOM 318 CG1 ILE 41 8.349 42.546 15.042 1.00103.96 C ATOM 319 CG2 ILE 41 8.594 40.360 13.693 1.00103.96 C ATOM 320 CD1 ILE 41 7.403 42.061 16.140 1.00103.96 C ATOM 321 C ILE 41 10.333 42.316 12.863 1.00103.96 C ATOM 322 O ILE 41 10.945 41.395 12.325 1.00103.96 O ATOM 323 N GLY 42 10.915 43.200 13.692 1.00 68.10 N ATOM 324 CA GLY 42 12.302 43.101 14.004 1.00 68.10 C ATOM 325 C GLY 42 13.009 43.711 12.851 1.00 68.10 C ATOM 326 O GLY 42 12.382 44.205 11.916 1.00 68.10 O ATOM 327 N ARG 43 14.349 43.687 12.887 1.00177.71 N ATOM 328 CA ARG 43 15.063 44.245 11.787 1.00177.71 C ATOM 329 CB ARG 43 16.586 44.295 11.999 1.00177.71 C ATOM 330 CG ARG 43 17.024 45.273 13.090 1.00177.71 C ATOM 331 CD ARG 43 18.530 45.256 13.361 1.00177.71 C ATOM 332 NE ARG 43 18.857 43.918 13.930 1.00177.71 N ATOM 333 CZ ARG 43 20.122 43.648 14.367 1.00177.71 C ATOM 334 NH1 ARG 43 21.097 44.600 14.278 1.00177.71 N ATOM 335 NH2 ARG 43 20.409 42.424 14.896 1.00177.71 N ATOM 336 C ARG 43 14.822 43.335 10.641 1.00177.71 C ATOM 337 O ARG 43 14.808 42.114 10.792 1.00177.71 O ATOM 338 N SER 44 14.597 43.915 9.453 1.00 57.83 N ATOM 339 CA SER 44 14.426 43.076 8.314 1.00 57.83 C ATOM 340 CB SER 44 13.334 43.558 7.345 1.00 57.83 C ATOM 341 OG SER 44 13.694 44.817 6.794 1.00 57.83 O ATOM 342 C SER 44 15.726 43.135 7.597 1.00 57.83 C ATOM 343 O SER 44 16.308 44.208 7.438 1.00 57.83 O ATOM 344 N LYS 45 16.227 41.969 7.159 1.00166.82 N ATOM 345 CA LYS 45 17.484 41.952 6.479 1.00166.82 C ATOM 346 CB LYS 45 18.038 40.541 6.218 1.00166.82 C ATOM 347 CG LYS 45 17.182 39.722 5.250 1.00166.82 C ATOM 348 CD LYS 45 17.886 38.474 4.714 1.00166.82 C ATOM 349 CE LYS 45 17.984 37.337 5.733 1.00166.82 C ATOM 350 NZ LYS 45 18.863 37.737 6.855 1.00166.82 N ATOM 351 C LYS 45 17.250 42.590 5.162 1.00166.82 C ATOM 352 O LYS 45 16.105 42.729 4.737 1.00166.82 O TER END