####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS337_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 24 - 45 4.95 15.30 LCS_AVERAGE: 41.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 28 - 35 1.81 14.52 LCS_AVERAGE: 14.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.77 21.83 LONGEST_CONTINUOUS_SEGMENT: 5 15 - 19 0.65 19.33 LONGEST_CONTINUOUS_SEGMENT: 5 29 - 33 0.91 18.06 LONGEST_CONTINUOUS_SEGMENT: 5 33 - 37 0.95 16.93 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 0.77 16.02 LCS_AVERAGE: 9.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 13 3 4 4 5 6 7 9 9 9 10 12 12 14 14 15 15 17 21 22 22 LCS_GDT V 3 V 3 4 6 13 3 4 4 5 5 6 9 9 9 10 12 12 14 14 15 15 20 21 23 30 LCS_GDT Q 4 Q 4 4 6 13 3 4 4 5 6 7 9 9 9 10 12 12 14 14 20 21 25 28 32 34 LCS_GDT G 5 G 5 4 6 13 3 4 5 5 6 7 9 9 11 14 16 19 21 23 26 27 28 30 32 34 LCS_GDT P 6 P 6 4 6 13 3 3 5 5 6 9 10 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT W 7 W 7 4 6 13 3 3 5 5 6 9 10 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT V 8 V 8 4 6 14 3 3 5 5 6 7 9 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT G 9 G 9 4 6 14 3 3 5 5 6 7 9 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT S 10 S 10 3 6 14 3 3 3 5 6 9 10 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT S 11 S 11 3 4 14 0 3 4 4 4 6 7 9 11 13 16 19 21 23 26 27 28 30 32 34 LCS_GDT Y 12 Y 12 3 3 14 0 3 4 4 4 6 7 9 11 13 16 19 21 23 26 27 28 30 32 34 LCS_GDT V 13 V 13 3 7 14 3 3 4 5 6 7 8 9 11 11 15 18 21 23 26 27 28 30 31 34 LCS_GDT A 14 A 14 5 7 14 3 4 5 6 6 7 7 7 11 11 13 15 18 21 26 27 28 30 31 32 LCS_GDT E 15 E 15 5 7 14 4 5 5 6 6 7 8 9 11 11 13 15 17 20 21 25 27 30 31 31 LCS_GDT T 16 T 16 5 7 14 4 5 5 6 6 7 8 9 11 11 13 15 17 20 25 27 28 30 31 32 LCS_GDT G 17 G 17 5 7 14 4 5 5 6 6 7 8 9 11 11 13 15 20 22 26 27 28 30 31 32 LCS_GDT Q 18 Q 18 5 7 14 4 5 5 6 6 7 8 9 11 11 12 15 20 22 26 27 28 30 31 32 LCS_GDT N 19 N 19 5 7 14 3 5 5 6 6 7 8 9 9 10 12 15 18 22 26 27 28 30 31 34 LCS_GDT W 20 W 20 4 4 14 3 4 5 5 6 9 10 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT A 21 A 21 4 4 14 3 4 5 6 6 9 10 12 14 16 16 19 21 23 26 27 28 30 32 34 LCS_GDT S 22 S 22 4 5 20 3 4 5 7 8 8 9 11 12 14 16 21 22 22 23 25 28 29 32 34 LCS_GDT L 23 L 23 3 5 20 3 3 4 4 5 5 7 11 12 14 16 21 22 22 23 24 28 29 32 34 LCS_GDT A 24 A 24 3 5 22 3 3 6 7 8 8 9 11 12 14 18 21 22 22 23 24 28 29 32 34 LCS_GDT A 25 A 25 3 5 22 3 4 6 6 6 6 6 9 10 11 12 15 18 20 23 23 24 25 25 26 LCS_GDT N 26 N 26 3 5 22 3 3 4 4 5 5 6 6 9 9 11 12 18 18 21 22 24 25 25 28 LCS_GDT E 27 E 27 3 7 22 3 3 3 5 6 9 9 10 12 14 18 21 22 22 23 23 25 29 32 34 LCS_GDT L 28 L 28 3 8 22 3 3 4 6 7 9 9 13 14 15 18 21 22 23 24 26 28 29 32 34 LCS_GDT R 29 R 29 5 8 22 3 4 5 5 7 9 9 10 12 15 18 20 22 22 23 26 28 29 32 34 LCS_GDT V 30 V 30 5 8 22 1 4 5 6 7 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT T 31 T 31 5 8 22 3 4 5 6 7 9 10 13 14 15 18 21 22 22 24 25 28 30 32 34 LCS_GDT E 32 E 32 5 8 22 3 4 5 6 7 9 10 13 14 15 18 21 22 22 24 25 28 30 32 34 LCS_GDT R 33 R 33 5 8 22 3 4 5 6 7 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT P 34 P 34 5 8 22 3 4 4 6 7 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT F 35 F 35 5 8 22 3 4 4 6 7 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT W 36 W 36 5 7 22 3 4 4 6 7 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT I 37 I 37 5 7 22 3 4 4 6 7 8 9 10 14 15 18 21 22 23 26 27 28 30 32 34 LCS_GDT S 38 S 38 3 7 22 1 3 4 6 7 8 10 13 14 15 18 21 22 22 26 27 28 30 31 32 LCS_GDT S 39 S 39 3 4 22 3 3 4 4 6 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT F 40 F 40 3 6 22 3 4 5 5 8 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT I 41 I 41 5 6 22 3 4 6 7 8 8 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT G 42 G 42 5 6 22 3 4 6 7 8 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 LCS_GDT R 43 R 43 5 6 22 3 4 6 7 8 8 9 11 12 14 18 21 22 23 24 26 28 29 32 34 LCS_GDT S 44 S 44 5 6 22 3 4 6 7 8 8 9 11 12 12 15 21 22 22 23 25 28 29 32 34 LCS_GDT K 45 K 45 5 6 22 0 4 6 7 8 8 9 11 12 12 18 21 22 22 23 23 28 29 32 34 LCS_AVERAGE LCS_A: 21.63 ( 9.45 14.20 41.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 8 9 10 13 14 16 18 21 22 23 26 27 28 30 32 34 GDT PERCENT_AT 9.09 11.36 13.64 15.91 18.18 20.45 22.73 29.55 31.82 36.36 40.91 47.73 50.00 52.27 59.09 61.36 63.64 68.18 72.73 77.27 GDT RMS_LOCAL 0.37 0.65 0.99 1.41 1.65 2.12 2.56 3.19 3.52 3.79 4.27 4.70 4.78 5.01 5.57 5.69 5.86 6.14 6.72 7.09 GDT RMS_ALL_AT 19.84 19.33 17.91 14.89 14.78 15.72 10.33 13.14 9.95 9.91 14.97 14.03 14.09 9.63 10.19 10.34 10.36 10.50 9.93 9.61 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 22.162 0 0.617 0.587 24.373 0.000 0.000 - LGA V 3 V 3 17.104 0 0.058 1.043 18.675 0.000 0.000 13.808 LGA Q 4 Q 4 17.116 0 0.102 0.183 24.130 0.000 0.000 20.811 LGA G 5 G 5 14.564 0 0.123 0.123 17.826 0.000 0.000 - LGA P 6 P 6 15.316 0 0.282 0.280 15.862 0.000 0.000 14.895 LGA W 7 W 7 14.725 0 0.306 1.022 22.825 0.000 0.000 22.540 LGA V 8 V 8 13.601 0 0.638 1.440 16.155 0.000 0.000 11.264 LGA G 9 G 9 15.021 0 0.217 0.217 15.064 0.000 0.000 - LGA S 10 S 10 16.901 0 0.645 0.616 19.189 0.000 0.000 19.189 LGA S 11 S 11 16.148 0 0.634 0.922 16.724 0.000 0.000 15.210 LGA Y 12 Y 12 15.749 0 0.633 1.345 19.623 0.000 0.000 19.623 LGA V 13 V 13 19.833 0 0.595 0.615 23.685 0.000 0.000 23.685 LGA A 14 A 14 23.201 0 0.621 0.610 24.533 0.000 0.000 - LGA E 15 E 15 23.099 0 0.063 0.696 24.074 0.000 0.000 23.143 LGA T 16 T 16 22.784 0 0.174 1.115 23.458 0.000 0.000 23.158 LGA G 17 G 17 23.427 0 0.035 0.035 23.427 0.000 0.000 - LGA Q 18 Q 18 21.903 0 0.620 1.480 24.078 0.000 0.000 24.078 LGA N 19 N 19 20.099 0 0.626 1.170 24.126 0.000 0.000 24.126 LGA W 20 W 20 14.574 0 0.155 1.082 19.338 0.000 0.000 19.338 LGA A 21 A 21 10.831 0 0.660 0.618 12.617 0.000 0.000 - LGA S 22 S 22 7.638 0 0.634 0.833 8.642 0.000 0.000 7.808 LGA L 23 L 23 8.485 0 0.648 0.969 14.229 0.000 0.000 13.160 LGA A 24 A 24 5.117 0 0.401 0.411 7.106 0.000 2.182 - LGA A 25 A 25 10.194 0 0.032 0.027 12.167 0.000 0.000 - LGA N 26 N 26 12.329 0 0.313 1.282 16.567 0.000 0.000 16.567 LGA E 27 E 27 8.476 0 0.663 1.305 13.599 0.000 0.000 12.902 LGA L 28 L 28 3.772 0 0.623 1.001 5.708 3.182 5.909 5.068 LGA R 29 R 29 6.090 0 0.606 1.367 13.618 4.545 1.653 13.618 LGA V 30 V 30 2.057 0 0.169 0.217 3.672 21.818 22.857 3.323 LGA T 31 T 31 2.482 0 0.684 0.977 5.598 48.182 29.091 5.326 LGA E 32 E 32 2.568 0 0.312 1.091 6.866 23.636 12.727 6.866 LGA R 33 R 33 3.020 0 0.120 1.461 14.815 44.545 16.364 14.815 LGA P 34 P 34 2.571 0 0.214 0.273 4.961 24.545 16.104 4.961 LGA F 35 F 35 2.979 0 0.114 1.234 9.761 32.727 12.066 9.761 LGA W 36 W 36 2.294 0 0.115 0.758 8.879 27.273 9.351 8.014 LGA I 37 I 37 5.404 0 0.648 1.522 9.569 5.909 2.955 6.648 LGA S 38 S 38 4.193 0 0.691 0.843 5.387 10.909 7.273 5.011 LGA S 39 S 39 2.564 0 0.648 0.794 4.905 29.091 20.606 4.354 LGA F 40 F 40 3.949 0 0.653 0.980 11.821 26.818 9.752 11.190 LGA I 41 I 41 3.078 0 0.170 0.199 4.489 13.182 18.409 2.526 LGA G 42 G 42 4.662 0 0.115 0.115 6.870 3.182 3.182 - LGA R 43 R 43 6.970 0 0.123 1.409 7.983 0.000 0.000 5.571 LGA S 44 S 44 9.192 0 0.616 0.593 12.000 0.000 0.000 8.675 LGA K 45 K 45 9.732 0 0.131 1.159 16.412 0.000 0.000 16.412 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.249 8.998 9.827 7.262 4.329 1.506 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.19 29.545 25.341 0.396 LGA_LOCAL RMSD: 3.187 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.144 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.249 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.538332 * X + 0.836508 * Y + 0.102237 * Z + -113.477440 Y_new = 0.482782 * X + 0.405556 * Y + -0.776174 * Z + -34.464897 Z_new = -0.690739 * X + -0.368481 * Y + -0.622175 * Z + 380.069702 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.410542 0.762510 -2.606894 [DEG: 138.1139 43.6886 -149.3640 ] ZXZ: 0.130965 2.242315 -2.060852 [DEG: 7.5038 128.4752 -118.0781 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS337_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.19 25.341 9.25 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS337_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 -11.094 33.662 13.282 1.00 81.99 N ATOM 10 CA ALA 2 -11.287 32.539 12.417 1.00 81.99 C ATOM 11 CB ALA 2 -12.614 32.591 11.640 1.00 81.99 C ATOM 12 C ALA 2 -10.177 32.593 11.422 1.00 81.99 C ATOM 13 O ALA 2 -9.698 31.558 10.958 1.00 81.99 O ATOM 14 N VAL 3 -9.749 33.827 11.083 1.00124.64 N ATOM 15 CA VAL 3 -8.741 34.068 10.091 1.00124.64 C ATOM 16 CB VAL 3 -8.243 35.484 10.062 1.00124.64 C ATOM 17 CG1 VAL 3 -7.462 35.749 11.359 1.00124.64 C ATOM 18 CG2 VAL 3 -7.421 35.696 8.777 1.00124.64 C ATOM 19 C VAL 3 -7.576 33.169 10.350 1.00124.64 C ATOM 20 O VAL 3 -7.261 32.843 11.492 1.00124.64 O ATOM 21 N GLN 4 -6.922 32.733 9.254 1.00 80.50 N ATOM 22 CA GLN 4 -5.886 31.741 9.309 1.00 80.50 C ATOM 23 CB GLN 4 -5.793 30.872 8.044 1.00 80.50 C ATOM 24 CG GLN 4 -6.998 29.958 7.822 1.00 80.50 C ATOM 25 CD GLN 4 -6.691 29.094 6.608 1.00 80.50 C ATOM 26 OE1 GLN 4 -5.858 29.442 5.772 1.00 80.50 O ATOM 27 NE2 GLN 4 -7.379 27.925 6.509 1.00 80.50 N ATOM 28 C GLN 4 -4.522 32.325 9.509 1.00 80.50 C ATOM 29 O GLN 4 -4.310 33.536 9.463 1.00 80.50 O ATOM 30 N GLY 5 -3.578 31.397 9.789 1.00158.36 N ATOM 31 CA GLY 5 -2.162 31.565 9.970 1.00158.36 C ATOM 32 C GLY 5 -1.653 30.150 9.992 1.00158.36 C ATOM 33 O GLY 5 -2.272 29.305 10.632 1.00158.36 O ATOM 34 N PRO 6 -0.556 29.847 9.342 1.00168.43 N ATOM 35 CA PRO 6 -0.114 28.480 9.186 1.00168.43 C ATOM 36 CD PRO 6 0.543 30.791 9.223 1.00168.43 C ATOM 37 CB PRO 6 1.291 28.570 8.600 1.00168.43 C ATOM 38 CG PRO 6 1.807 29.918 9.134 1.00168.43 C ATOM 39 C PRO 6 -0.139 27.581 10.390 1.00168.43 C ATOM 40 O PRO 6 -0.976 26.682 10.430 1.00168.43 O ATOM 41 N TRP 7 0.753 27.787 11.375 1.00152.08 N ATOM 42 CA TRP 7 0.772 26.950 12.544 1.00152.08 C ATOM 43 CB TRP 7 1.978 25.995 12.564 1.00152.08 C ATOM 44 CG TRP 7 2.047 25.045 13.734 1.00152.08 C ATOM 45 CD2 TRP 7 2.594 25.358 15.025 1.00152.08 C ATOM 46 CD1 TRP 7 1.641 23.744 13.794 1.00152.08 C ATOM 47 NE1 TRP 7 1.908 23.222 15.037 1.00152.08 N ATOM 48 CE2 TRP 7 2.494 24.205 15.806 1.00152.08 C ATOM 49 CE3 TRP 7 3.137 26.511 15.519 1.00152.08 C ATOM 50 CZ2 TRP 7 2.938 24.187 17.097 1.00152.08 C ATOM 51 CZ3 TRP 7 3.580 26.489 16.824 1.00152.08 C ATOM 52 CH2 TRP 7 3.484 25.349 17.598 1.00152.08 C ATOM 53 C TRP 7 0.985 27.919 13.637 1.00152.08 C ATOM 54 O TRP 7 2.057 28.508 13.724 1.00152.08 O ATOM 55 N VAL 8 -0.003 28.093 14.526 1.00134.25 N ATOM 56 CA VAL 8 0.184 29.153 15.461 1.00134.25 C ATOM 57 CB VAL 8 -0.953 30.118 15.492 1.00134.25 C ATOM 58 CG1 VAL 8 -0.982 30.867 14.153 1.00134.25 C ATOM 59 CG2 VAL 8 -2.235 29.318 15.751 1.00134.25 C ATOM 60 C VAL 8 0.369 28.633 16.837 1.00134.25 C ATOM 61 O VAL 8 -0.108 27.562 17.209 1.00134.25 O ATOM 62 N GLY 9 1.121 29.428 17.615 1.00 87.51 N ATOM 63 CA GLY 9 1.430 29.157 18.978 1.00 87.51 C ATOM 64 C GLY 9 0.635 30.106 19.804 1.00 87.51 C ATOM 65 O GLY 9 -0.563 29.921 20.010 1.00 87.51 O ATOM 66 N SER 10 1.311 31.148 20.320 1.00 82.39 N ATOM 67 CA SER 10 0.659 32.041 21.223 1.00 82.39 C ATOM 68 CB SER 10 1.569 32.528 22.363 1.00 82.39 C ATOM 69 OG SER 10 2.658 33.276 21.842 1.00 82.39 O ATOM 70 C SER 10 0.113 33.242 20.529 1.00 82.39 C ATOM 71 O SER 10 0.639 33.710 19.521 1.00 82.39 O ATOM 72 N SER 11 -1.018 33.735 21.075 1.00105.21 N ATOM 73 CA SER 11 -1.634 34.947 20.635 1.00105.21 C ATOM 74 CB SER 11 -2.875 34.733 19.751 1.00105.21 C ATOM 75 OG SER 11 -2.497 34.127 18.524 1.00105.21 O ATOM 76 C SER 11 -2.069 35.637 21.886 1.00105.21 C ATOM 77 O SER 11 -2.689 35.025 22.754 1.00105.21 O ATOM 78 N TYR 12 -1.740 36.933 22.024 1.00119.07 N ATOM 79 CA TYR 12 -2.128 37.605 23.226 1.00119.07 C ATOM 80 CB TYR 12 -1.030 37.681 24.299 1.00119.07 C ATOM 81 CG TYR 12 -0.924 36.329 24.917 1.00119.07 C ATOM 82 CD1 TYR 12 -1.743 36.012 25.973 1.00119.07 C ATOM 83 CD2 TYR 12 -0.036 35.387 24.450 1.00119.07 C ATOM 84 CE1 TYR 12 -1.677 34.776 26.568 1.00119.07 C ATOM 85 CE2 TYR 12 0.036 34.146 25.043 1.00119.07 C ATOM 86 CZ TYR 12 -0.784 33.840 26.105 1.00119.07 C ATOM 87 OH TYR 12 -0.715 32.570 26.719 1.00119.07 O ATOM 88 C TYR 12 -2.574 38.993 22.920 1.00119.07 C ATOM 89 O TYR 12 -2.339 39.530 21.839 1.00119.07 O ATOM 90 N VAL 13 -3.269 39.595 23.903 1.00 61.87 N ATOM 91 CA VAL 13 -3.772 40.930 23.788 1.00 61.87 C ATOM 92 CB VAL 13 -5.161 41.085 24.345 1.00 61.87 C ATOM 93 CG1 VAL 13 -5.627 42.542 24.193 1.00 61.87 C ATOM 94 CG2 VAL 13 -6.076 40.082 23.628 1.00 61.87 C ATOM 95 C VAL 13 -2.873 41.806 24.598 1.00 61.87 C ATOM 96 O VAL 13 -2.130 41.332 25.459 1.00 61.87 O ATOM 97 N ALA 14 -2.874 43.111 24.277 1.00 57.12 N ATOM 98 CA ALA 14 -2.142 44.066 25.049 1.00 57.12 C ATOM 99 CB ALA 14 -2.020 45.441 24.371 1.00 57.12 C ATOM 100 C ALA 14 -2.933 44.249 26.301 1.00 57.12 C ATOM 101 O ALA 14 -4.059 43.765 26.402 1.00 57.12 O ATOM 102 N GLU 15 -2.353 44.912 27.317 1.00126.72 N ATOM 103 CA GLU 15 -3.112 45.139 28.510 1.00126.72 C ATOM 104 CB GLU 15 -2.331 45.820 29.647 1.00126.72 C ATOM 105 CG GLU 15 -3.187 46.068 30.895 1.00126.72 C ATOM 106 CD GLU 15 -3.653 44.736 31.471 1.00126.72 C ATOM 107 OE1 GLU 15 -4.271 43.940 30.713 1.00126.72 O ATOM 108 OE2 GLU 15 -3.403 44.502 32.683 1.00126.72 O ATOM 109 C GLU 15 -4.266 46.018 28.142 1.00126.72 C ATOM 110 O GLU 15 -5.341 45.936 28.737 1.00126.72 O ATOM 111 N THR 16 -4.063 46.895 27.140 1.00 90.29 N ATOM 112 CA THR 16 -5.085 47.808 26.712 1.00 90.29 C ATOM 113 CB THR 16 -4.640 48.658 25.558 1.00 90.29 C ATOM 114 OG1 THR 16 -3.474 49.385 25.911 1.00 90.29 O ATOM 115 CG2 THR 16 -5.773 49.630 25.193 1.00 90.29 C ATOM 116 C THR 16 -6.270 47.018 26.247 1.00 90.29 C ATOM 117 O THR 16 -7.403 47.314 26.624 1.00 90.29 O ATOM 118 N GLY 17 -6.036 45.969 25.435 1.00 51.20 N ATOM 119 CA GLY 17 -7.124 45.165 24.954 1.00 51.20 C ATOM 120 C GLY 17 -7.484 45.593 23.566 1.00 51.20 C ATOM 121 O GLY 17 -8.422 45.071 22.965 1.00 51.20 O ATOM 122 N GLN 18 -6.782 46.602 23.029 1.00104.78 N ATOM 123 CA GLN 18 -7.082 47.012 21.690 1.00104.78 C ATOM 124 CB GLN 18 -6.486 48.381 21.318 1.00104.78 C ATOM 125 CG GLN 18 -6.932 48.847 19.930 1.00104.78 C ATOM 126 CD GLN 18 -6.344 50.226 19.687 1.00104.78 C ATOM 127 OE1 GLN 18 -5.532 50.713 20.472 1.00104.78 O ATOM 128 NE2 GLN 18 -6.772 50.879 18.574 1.00104.78 N ATOM 129 C GLN 18 -6.602 45.996 20.690 1.00104.78 C ATOM 130 O GLN 18 -7.290 45.710 19.710 1.00104.78 O ATOM 131 N ASN 19 -5.418 45.390 20.912 1.00118.74 N ATOM 132 CA ASN 19 -4.891 44.584 19.848 1.00118.74 C ATOM 133 CB ASN 19 -3.554 45.122 19.311 1.00118.74 C ATOM 134 CG ASN 19 -2.548 45.062 20.455 1.00118.74 C ATOM 135 OD1 ASN 19 -2.830 45.516 21.563 1.00118.74 O ATOM 136 ND2 ASN 19 -1.348 44.482 20.187 1.00118.74 N ATOM 137 C ASN 19 -4.638 43.185 20.300 1.00118.74 C ATOM 138 O ASN 19 -4.702 42.866 21.483 1.00118.74 O ATOM 139 N TRP 20 -4.396 42.300 19.309 1.00139.69 N ATOM 140 CA TRP 20 -4.004 40.941 19.535 1.00139.69 C ATOM 141 CB TRP 20 -5.025 39.878 19.078 1.00139.69 C ATOM 142 CG TRP 20 -6.136 39.582 20.065 1.00139.69 C ATOM 143 CD2 TRP 20 -7.318 40.376 20.278 1.00139.69 C ATOM 144 CD1 TRP 20 -6.221 38.532 20.931 1.00139.69 C ATOM 145 NE1 TRP 20 -7.382 38.611 21.660 1.00139.69 N ATOM 146 CE2 TRP 20 -8.065 39.744 21.275 1.00139.69 C ATOM 147 CE3 TRP 20 -7.750 41.533 19.694 1.00139.69 C ATOM 148 CZ2 TRP 20 -9.253 40.262 21.705 1.00139.69 C ATOM 149 CZ3 TRP 20 -8.948 42.052 20.134 1.00139.69 C ATOM 150 CH2 TRP 20 -9.685 41.430 21.120 1.00139.69 C ATOM 151 C TRP 20 -2.757 40.737 18.746 1.00139.69 C ATOM 152 O TRP 20 -2.455 41.494 17.830 1.00139.69 O ATOM 153 N ALA 21 -1.960 39.726 19.130 1.00 54.03 N ATOM 154 CA ALA 21 -0.786 39.433 18.367 1.00 54.03 C ATOM 155 CB ALA 21 0.535 39.841 19.045 1.00 54.03 C ATOM 156 C ALA 21 -0.770 37.951 18.205 1.00 54.03 C ATOM 157 O ALA 21 -1.220 37.212 19.077 1.00 54.03 O ATOM 158 N SER 22 -0.276 37.481 17.048 1.00 91.66 N ATOM 159 CA SER 22 -0.203 36.070 16.849 1.00 91.66 C ATOM 160 CB SER 22 -1.117 35.570 15.719 1.00 91.66 C ATOM 161 OG SER 22 -1.037 34.157 15.612 1.00 91.66 O ATOM 162 C SER 22 1.206 35.784 16.446 1.00 91.66 C ATOM 163 O SER 22 1.755 36.437 15.561 1.00 91.66 O ATOM 164 N LEU 23 1.837 34.806 17.122 1.00122.08 N ATOM 165 CA LEU 23 3.182 34.431 16.808 1.00122.08 C ATOM 166 CB LEU 23 4.153 34.618 17.986 1.00122.08 C ATOM 167 CG LEU 23 4.327 36.095 18.399 1.00122.08 C ATOM 168 CD1 LEU 23 2.997 36.703 18.873 1.00122.08 C ATOM 169 CD2 LEU 23 5.454 36.258 19.431 1.00122.08 C ATOM 170 C LEU 23 3.125 32.982 16.478 1.00122.08 C ATOM 171 O LEU 23 2.641 32.176 17.269 1.00122.08 O ATOM 172 N ALA 24 3.674 32.610 15.312 1.00 90.30 N ATOM 173 CA ALA 24 3.458 31.288 14.819 1.00 90.30 C ATOM 174 CB ALA 24 2.189 31.222 13.958 1.00 90.30 C ATOM 175 C ALA 24 4.612 30.920 13.943 1.00 90.30 C ATOM 176 O ALA 24 5.756 30.871 14.395 1.00 90.30 O ATOM 177 N ALA 25 4.319 30.646 12.653 1.00 96.80 N ATOM 178 CA ALA 25 5.293 30.145 11.729 1.00 96.80 C ATOM 179 CB ALA 25 4.748 30.047 10.292 1.00 96.80 C ATOM 180 C ALA 25 6.474 31.062 11.705 1.00 96.80 C ATOM 181 O ALA 25 7.608 30.594 11.723 1.00 96.80 O ATOM 182 N ASN 26 6.277 32.386 11.631 1.00196.05 N ATOM 183 CA ASN 26 7.439 33.221 11.730 1.00196.05 C ATOM 184 CB ASN 26 8.426 33.027 10.574 1.00196.05 C ATOM 185 CG ASN 26 7.743 33.546 9.318 1.00196.05 C ATOM 186 OD1 ASN 26 8.205 34.499 8.693 1.00196.05 O ATOM 187 ND2 ASN 26 6.602 32.911 8.943 1.00196.05 N ATOM 188 C ASN 26 6.948 34.613 11.602 1.00196.05 C ATOM 189 O ASN 26 7.697 35.517 11.233 1.00196.05 O ATOM 190 N GLU 27 5.666 34.823 11.935 1.00 77.75 N ATOM 191 CA GLU 27 5.136 36.127 11.715 1.00 77.75 C ATOM 192 CB GLU 27 4.080 36.152 10.604 1.00 77.75 C ATOM 193 CG GLU 27 4.630 35.776 9.229 1.00 77.75 C ATOM 194 CD GLU 27 3.466 35.840 8.252 1.00 77.75 C ATOM 195 OE1 GLU 27 2.422 36.443 8.616 1.00 77.75 O ATOM 196 OE2 GLU 27 3.599 35.284 7.129 1.00 77.75 O ATOM 197 C GLU 27 4.456 36.595 12.953 1.00 77.75 C ATOM 198 O GLU 27 3.871 35.813 13.700 1.00 77.75 O ATOM 199 N LEU 28 4.540 37.916 13.185 1.00164.58 N ATOM 200 CA LEU 28 3.877 38.563 14.275 1.00164.58 C ATOM 201 CB LEU 28 4.767 39.637 14.942 1.00164.58 C ATOM 202 CG LEU 28 4.139 40.388 16.132 1.00164.58 C ATOM 203 CD1 LEU 28 3.017 41.336 15.681 1.00164.58 C ATOM 204 CD2 LEU 28 3.698 39.410 17.233 1.00164.58 C ATOM 205 C LEU 28 2.696 39.241 13.640 1.00164.58 C ATOM 206 O LEU 28 2.837 39.893 12.605 1.00164.58 O ATOM 207 N ARG 29 1.495 39.096 14.243 1.00201.66 N ATOM 208 CA ARG 29 0.289 39.640 13.675 1.00201.66 C ATOM 209 CB ARG 29 -0.735 38.538 13.347 1.00201.66 C ATOM 210 CG ARG 29 -1.805 38.917 12.323 1.00201.66 C ATOM 211 CD ARG 29 -1.321 38.813 10.873 1.00201.66 C ATOM 212 NE ARG 29 -1.167 37.362 10.553 1.00201.66 N ATOM 213 CZ ARG 29 -2.226 36.629 10.098 1.00201.66 C ATOM 214 NH1 ARG 29 -3.446 37.214 9.909 1.00201.66 N ATOM 215 NH2 ARG 29 -2.062 35.301 9.827 1.00201.66 N ATOM 216 C ARG 29 -0.336 40.521 14.726 1.00201.66 C ATOM 217 O ARG 29 -0.022 40.384 15.904 1.00201.66 O ATOM 218 N VAL 30 -1.225 41.466 14.332 1.00 95.24 N ATOM 219 CA VAL 30 -1.846 42.370 15.273 1.00 95.24 C ATOM 220 CB VAL 30 -1.337 43.779 15.163 1.00 95.24 C ATOM 221 CG1 VAL 30 -2.079 44.659 16.183 1.00 95.24 C ATOM 222 CG2 VAL 30 0.188 43.761 15.361 1.00 95.24 C ATOM 223 C VAL 30 -3.337 42.405 15.016 1.00 95.24 C ATOM 224 O VAL 30 -3.762 42.135 13.892 1.00 95.24 O ATOM 225 N THR 31 -4.165 42.753 16.048 1.00293.72 N ATOM 226 CA THR 31 -5.607 42.701 15.931 1.00293.72 C ATOM 227 CB THR 31 -6.209 41.584 16.738 1.00293.72 C ATOM 228 OG1 THR 31 -5.648 40.347 16.324 1.00293.72 O ATOM 229 CG2 THR 31 -7.733 41.550 16.530 1.00293.72 C ATOM 230 C THR 31 -6.260 43.982 16.366 1.00293.72 C ATOM 231 O THR 31 -5.738 44.726 17.194 1.00293.72 O ATOM 232 N GLU 32 -7.439 44.249 15.760 1.00297.73 N ATOM 233 CA GLU 32 -8.351 45.328 16.027 1.00297.73 C ATOM 234 CB GLU 32 -7.933 46.700 15.464 1.00297.73 C ATOM 235 CG GLU 32 -8.766 47.847 16.051 1.00297.73 C ATOM 236 CD GLU 32 -8.151 49.170 15.626 1.00297.73 C ATOM 237 OE1 GLU 32 -7.263 49.155 14.733 1.00297.73 O ATOM 238 OE2 GLU 32 -8.563 50.215 16.196 1.00297.73 O ATOM 239 C GLU 32 -9.595 44.885 15.332 1.00297.73 C ATOM 240 O GLU 32 -9.984 43.725 15.464 1.00297.73 O ATOM 241 N ARG 33 -10.280 45.794 14.605 1.00319.10 N ATOM 242 CA ARG 33 -11.374 45.304 13.820 1.00319.10 C ATOM 243 CB ARG 33 -12.049 46.361 12.931 1.00319.10 C ATOM 244 CG ARG 33 -12.762 47.488 13.679 1.00319.10 C ATOM 245 CD ARG 33 -13.513 48.431 12.738 1.00319.10 C ATOM 246 NE ARG 33 -12.517 48.958 11.761 1.00319.10 N ATOM 247 CZ ARG 33 -12.810 50.041 10.982 1.00319.10 C ATOM 248 NH1 ARG 33 -14.016 50.666 11.103 1.00319.10 N ATOM 249 NH2 ARG 33 -11.891 50.495 10.080 1.00319.10 N ATOM 250 C ARG 33 -10.684 44.360 12.898 1.00319.10 C ATOM 251 O ARG 33 -9.594 44.673 12.428 1.00319.10 O ATOM 252 N PRO 34 -11.276 43.217 12.659 1.00147.39 N ATOM 253 CA PRO 34 -10.662 42.162 11.896 1.00147.39 C ATOM 254 CD PRO 34 -12.710 43.045 12.787 1.00147.39 C ATOM 255 CB PRO 34 -11.771 41.152 11.597 1.00147.39 C ATOM 256 CG PRO 34 -12.930 41.545 12.534 1.00147.39 C ATOM 257 C PRO 34 -10.078 42.689 10.631 1.00147.39 C ATOM 258 O PRO 34 -10.829 43.086 9.742 1.00147.39 O ATOM 259 N PHE 35 -8.737 42.693 10.532 1.00103.34 N ATOM 260 CA PHE 35 -8.109 43.164 9.340 1.00103.34 C ATOM 261 CB PHE 35 -8.339 44.668 9.091 1.00103.34 C ATOM 262 CG PHE 35 -8.217 44.950 7.628 1.00103.34 C ATOM 263 CD1 PHE 35 -9.272 44.671 6.787 1.00103.34 C ATOM 264 CD2 PHE 35 -7.080 45.512 7.099 1.00103.34 C ATOM 265 CE1 PHE 35 -9.190 44.924 5.439 1.00103.34 C ATOM 266 CE2 PHE 35 -6.991 45.769 5.750 1.00103.34 C ATOM 267 CZ PHE 35 -8.045 45.479 4.918 1.00103.34 C ATOM 268 C PHE 35 -6.655 42.910 9.561 1.00103.34 C ATOM 269 O PHE 35 -6.250 42.498 10.647 1.00103.34 O ATOM 270 N TRP 36 -5.829 43.135 8.527 1.00127.50 N ATOM 271 CA TRP 36 -4.430 42.865 8.633 1.00127.50 C ATOM 272 CB TRP 36 -3.794 42.516 7.283 1.00127.50 C ATOM 273 CG TRP 36 -4.382 41.248 6.710 1.00127.50 C ATOM 274 CD2 TRP 36 -3.847 40.512 5.600 1.00127.50 C ATOM 275 CD1 TRP 36 -5.498 40.578 7.117 1.00127.50 C ATOM 276 NE1 TRP 36 -5.696 39.471 6.328 1.00127.50 N ATOM 277 CE2 TRP 36 -4.686 39.417 5.389 1.00127.50 C ATOM 278 CE3 TRP 36 -2.748 40.730 4.818 1.00127.50 C ATOM 279 CZ2 TRP 36 -4.440 38.519 4.392 1.00127.50 C ATOM 280 CZ3 TRP 36 -2.501 39.822 3.813 1.00127.50 C ATOM 281 CH2 TRP 36 -3.330 38.738 3.603 1.00127.50 C ATOM 282 C TRP 36 -3.743 44.055 9.209 1.00127.50 C ATOM 283 O TRP 36 -4.261 45.171 9.197 1.00127.50 O ATOM 284 N ILE 37 -2.541 43.801 9.756 1.00324.10 N ATOM 285 CA ILE 37 -1.725 44.766 10.425 1.00324.10 C ATOM 286 CB ILE 37 -1.619 44.527 11.896 1.00324.10 C ATOM 287 CG1 ILE 37 -0.843 43.222 12.162 1.00324.10 C ATOM 288 CG2 ILE 37 -3.035 44.561 12.492 1.00324.10 C ATOM 289 CD1 ILE 37 -1.452 41.949 11.563 1.00324.10 C ATOM 290 C ILE 37 -0.345 44.546 9.925 1.00324.10 C ATOM 291 O ILE 37 -0.132 43.792 8.978 1.00324.10 O ATOM 292 N SER 38 0.636 45.238 10.533 1.00105.12 N ATOM 293 CA SER 38 1.984 45.025 10.109 1.00105.12 C ATOM 294 CB SER 38 2.980 46.041 10.697 1.00105.12 C ATOM 295 OG SER 38 4.280 45.808 10.176 1.00105.12 O ATOM 296 C SER 38 2.380 43.665 10.575 1.00105.12 C ATOM 297 O SER 38 1.929 43.192 11.618 1.00105.12 O ATOM 298 N SER 39 3.232 42.982 9.788 1.00 90.34 N ATOM 299 CA SER 39 3.675 41.688 10.203 1.00 90.34 C ATOM 300 CB SER 39 3.556 40.617 9.108 1.00 90.34 C ATOM 301 OG SER 39 2.189 40.383 8.800 1.00 90.34 O ATOM 302 C SER 39 5.117 41.836 10.546 1.00 90.34 C ATOM 303 O SER 39 5.920 42.283 9.727 1.00 90.34 O ATOM 304 N PHE 40 5.490 41.462 11.783 1.00119.45 N ATOM 305 CA PHE 40 6.873 41.611 12.118 1.00119.45 C ATOM 306 CB PHE 40 7.163 41.770 13.617 1.00119.45 C ATOM 307 CG PHE 40 6.596 43.079 14.039 1.00119.45 C ATOM 308 CD1 PHE 40 7.271 44.246 13.764 1.00119.45 C ATOM 309 CD2 PHE 40 5.380 43.144 14.682 1.00119.45 C ATOM 310 CE1 PHE 40 6.759 45.465 14.142 1.00119.45 C ATOM 311 CE2 PHE 40 4.864 44.361 15.063 1.00119.45 C ATOM 312 CZ PHE 40 5.554 45.521 14.800 1.00119.45 C ATOM 313 C PHE 40 7.560 40.378 11.647 1.00119.45 C ATOM 314 O PHE 40 7.154 39.263 11.963 1.00119.45 O ATOM 315 N ILE 41 8.639 40.552 10.872 1.00 57.01 N ATOM 316 CA ILE 41 9.308 39.427 10.298 1.00 57.01 C ATOM 317 CB ILE 41 9.233 39.455 8.794 1.00 57.01 C ATOM 318 CG1 ILE 41 7.764 39.488 8.346 1.00 57.01 C ATOM 319 CG2 ILE 41 10.007 38.259 8.217 1.00 57.01 C ATOM 320 CD1 ILE 41 7.591 39.858 6.872 1.00 57.01 C ATOM 321 C ILE 41 10.743 39.520 10.712 1.00 57.01 C ATOM 322 O ILE 41 11.201 40.581 11.133 1.00 57.01 O ATOM 323 N GLY 42 11.493 38.402 10.606 1.00 51.31 N ATOM 324 CA GLY 42 12.880 38.429 10.970 1.00 51.31 C ATOM 325 C GLY 42 13.231 37.327 11.928 1.00 51.31 C ATOM 326 O GLY 42 14.387 36.910 11.959 1.00 51.31 O ATOM 327 N ARG 43 12.284 36.795 12.730 1.00216.95 N ATOM 328 CA ARG 43 12.708 35.740 13.618 1.00216.95 C ATOM 329 CB ARG 43 11.618 35.192 14.559 1.00216.95 C ATOM 330 CG ARG 43 11.164 36.153 15.660 1.00216.95 C ATOM 331 CD ARG 43 10.206 37.249 15.193 1.00216.95 C ATOM 332 NE ARG 43 9.664 37.893 16.421 1.00216.95 N ATOM 333 CZ ARG 43 8.513 38.622 16.368 1.00216.95 C ATOM 334 NH1 ARG 43 7.874 38.794 15.174 1.00216.95 N ATOM 335 NH2 ARG 43 8.015 39.175 17.514 1.00216.95 N ATOM 336 C ARG 43 13.135 34.595 12.759 1.00216.95 C ATOM 337 O ARG 43 12.372 34.115 11.923 1.00216.95 O ATOM 338 N SER 44 14.383 34.129 12.962 1.00 48.03 N ATOM 339 CA SER 44 14.956 33.079 12.175 1.00 48.03 C ATOM 340 CB SER 44 16.454 32.891 12.457 1.00 48.03 C ATOM 341 OG SER 44 17.157 34.077 12.116 1.00 48.03 O ATOM 342 C SER 44 14.258 31.786 12.435 1.00 48.03 C ATOM 343 O SER 44 13.990 31.026 11.507 1.00 48.03 O ATOM 344 N LYS 45 13.934 31.478 13.703 1.00146.11 N ATOM 345 CA LYS 45 13.285 30.222 13.890 1.00146.11 C ATOM 346 CB LYS 45 14.128 29.189 14.669 1.00146.11 C ATOM 347 CG LYS 45 15.570 29.012 14.182 1.00146.11 C ATOM 348 CD LYS 45 15.727 28.441 12.773 1.00146.11 C ATOM 349 CE LYS 45 17.188 28.168 12.406 1.00146.11 C ATOM 350 NZ LYS 45 17.274 27.540 11.069 1.00146.11 N ATOM 351 C LYS 45 11.926 30.482 14.491 1.00146.11 C ATOM 352 O LYS 45 11.530 31.631 14.670 1.00146.11 O TER END