####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS329_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS329_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 25 - 45 4.58 14.46 LCS_AVERAGE: 39.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 2 - 10 2.00 14.58 LCS_AVERAGE: 14.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 40 - 45 0.48 15.33 LCS_AVERAGE: 9.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT V 3 V 3 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT Q 4 Q 4 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT G 5 G 5 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 18 20 22 24 26 27 29 LCS_GDT P 6 P 6 5 9 15 3 3 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT W 7 W 7 3 9 15 3 3 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT V 8 V 8 3 9 15 3 3 4 5 7 7 8 9 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT G 9 G 9 3 9 15 3 4 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT S 10 S 10 3 9 15 3 3 3 6 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT S 11 S 11 3 3 15 3 3 3 3 3 5 5 8 9 10 13 16 16 19 21 23 24 26 27 29 LCS_GDT Y 12 Y 12 3 3 15 3 3 4 4 5 5 9 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT V 13 V 13 3 3 15 1 3 4 4 5 5 8 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT A 14 A 14 4 7 15 0 4 4 5 6 6 8 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT E 15 E 15 4 7 15 3 4 4 5 6 7 8 11 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT T 16 T 16 4 7 15 3 4 4 5 6 6 7 7 8 8 11 16 17 18 21 23 24 26 27 29 LCS_GDT G 17 G 17 4 7 13 3 4 4 5 6 7 8 12 12 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT Q 18 Q 18 4 7 13 3 4 4 5 6 6 7 8 9 10 12 13 15 17 19 20 22 25 26 29 LCS_GDT N 19 N 19 4 7 13 3 4 4 5 6 6 8 8 9 10 12 12 14 15 17 20 22 25 26 27 LCS_GDT W 20 W 20 4 7 13 3 4 4 4 6 6 8 8 9 10 12 12 14 15 17 20 22 25 26 27 LCS_GDT A 21 A 21 4 5 13 3 3 4 4 5 6 8 8 9 10 12 12 14 15 16 19 21 25 26 27 LCS_GDT S 22 S 22 4 5 13 3 3 4 4 5 6 8 8 9 10 12 12 14 15 16 19 21 23 26 27 LCS_GDT L 23 L 23 4 5 13 3 3 4 4 5 5 8 9 10 11 11 12 14 15 17 19 22 25 26 27 LCS_GDT A 24 A 24 4 5 13 3 3 4 4 5 5 8 9 10 11 11 12 13 13 13 15 18 19 23 23 LCS_GDT A 25 A 25 4 5 21 3 3 4 4 5 5 8 9 10 11 11 12 13 15 16 19 21 23 26 27 LCS_GDT N 26 N 26 4 5 21 3 3 4 4 5 7 8 9 12 16 17 19 20 20 20 20 22 25 26 29 LCS_GDT E 27 E 27 3 6 21 3 3 4 4 6 9 13 15 18 19 19 19 20 20 20 22 24 26 27 29 LCS_GDT L 28 L 28 5 6 21 3 3 5 5 6 9 13 15 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT R 29 R 29 5 6 21 3 4 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT V 30 V 30 5 6 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT T 31 T 31 5 6 21 3 4 5 7 9 11 13 16 18 19 19 19 20 20 21 22 24 26 27 29 LCS_GDT E 32 E 32 5 6 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 22 24 25 27 29 LCS_GDT R 33 R 33 5 6 21 3 4 5 5 9 11 13 16 18 19 19 19 20 20 20 22 24 25 25 27 LCS_GDT P 34 P 34 3 6 21 3 3 3 6 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT F 35 F 35 4 5 21 3 3 4 4 5 8 10 13 16 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT W 36 W 36 4 5 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT I 37 I 37 4 5 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT S 38 S 38 4 5 21 1 3 4 4 5 9 13 16 18 19 19 19 20 20 20 20 22 25 26 29 LCS_GDT S 39 S 39 3 7 21 2 3 4 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT F 40 F 40 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT I 41 I 41 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT G 42 G 42 6 7 21 4 6 6 8 8 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT R 43 R 43 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT S 44 S 44 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 22 23 25 26 29 LCS_GDT K 45 K 45 6 7 21 3 6 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_AVERAGE LCS_A: 21.44 ( 9.76 14.77 39.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 GDT PERCENT_AT 9.09 13.64 13.64 18.18 20.45 25.00 29.55 36.36 40.91 43.18 43.18 43.18 45.45 45.45 47.73 52.27 54.55 59.09 61.36 65.91 GDT RMS_LOCAL 0.21 0.48 0.48 1.26 1.67 1.93 2.58 2.94 3.29 3.42 3.42 3.42 3.78 3.78 5.76 6.09 6.10 6.45 6.59 7.08 GDT RMS_ALL_AT 14.72 15.33 15.33 16.04 15.78 15.75 15.17 15.09 14.74 14.72 14.72 14.72 14.56 14.56 12.04 12.22 11.90 12.03 11.98 11.59 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 16.632 0 0.023 0.060 19.144 0.000 0.000 - LGA V 3 V 3 17.309 0 0.067 1.094 18.869 0.000 0.000 14.339 LGA Q 4 Q 4 22.877 0 0.080 1.075 29.489 0.000 0.000 29.489 LGA G 5 G 5 25.275 0 0.597 0.597 28.059 0.000 0.000 - LGA P 6 P 6 28.380 0 0.022 0.425 32.297 0.000 0.000 32.297 LGA W 7 W 7 26.209 0 0.440 0.445 30.840 0.000 0.000 29.963 LGA V 8 V 8 22.043 0 0.664 0.892 23.268 0.000 0.000 19.369 LGA G 9 G 9 19.974 0 0.560 0.560 22.006 0.000 0.000 - LGA S 10 S 10 22.017 0 0.677 0.739 24.958 0.000 0.000 24.958 LGA S 11 S 11 17.595 0 0.625 0.908 19.118 0.000 0.000 16.826 LGA Y 12 Y 12 15.390 0 0.657 1.226 21.714 0.000 0.000 21.714 LGA V 13 V 13 17.239 0 0.594 0.894 21.181 0.000 0.000 21.181 LGA A 14 A 14 17.132 0 0.628 0.604 17.132 0.000 0.000 - LGA E 15 E 15 13.828 0 0.644 1.031 15.869 0.000 0.000 14.907 LGA T 16 T 16 16.051 0 0.345 1.007 19.026 0.000 0.000 18.513 LGA G 17 G 17 18.515 0 0.644 0.644 18.515 0.000 0.000 - LGA Q 18 Q 18 18.709 0 0.064 1.403 22.427 0.000 0.000 22.427 LGA N 19 N 19 20.253 0 0.661 1.162 22.397 0.000 0.000 22.397 LGA W 20 W 20 22.120 0 0.057 1.205 30.227 0.000 0.000 30.225 LGA A 21 A 21 20.719 0 0.644 0.596 21.115 0.000 0.000 - LGA S 22 S 22 21.774 0 0.143 0.192 25.367 0.000 0.000 25.367 LGA L 23 L 23 19.803 0 0.634 1.235 24.803 0.000 0.000 24.803 LGA A 24 A 24 19.289 0 0.626 0.598 21.951 0.000 0.000 - LGA A 25 A 25 15.013 0 0.385 0.390 16.707 0.000 0.000 - LGA N 26 N 26 10.255 0 0.623 0.848 14.324 0.000 0.000 10.924 LGA E 27 E 27 7.263 0 0.678 1.050 9.049 0.000 0.000 9.049 LGA L 28 L 28 5.485 0 0.251 1.047 10.852 5.455 2.727 10.852 LGA R 29 R 29 1.898 0 0.495 1.835 10.465 54.091 21.322 10.465 LGA V 30 V 30 2.596 0 0.064 0.106 7.139 42.727 24.416 6.409 LGA T 31 T 31 2.773 0 0.629 0.614 7.120 33.636 19.221 7.120 LGA E 32 E 32 3.217 0 0.688 1.246 7.382 22.273 10.101 7.382 LGA R 33 R 33 1.342 0 0.048 1.316 14.051 52.273 20.000 14.051 LGA P 34 P 34 2.011 0 0.620 0.609 4.904 30.909 29.610 2.501 LGA F 35 F 35 5.252 0 0.631 1.319 12.865 5.455 1.983 12.865 LGA W 36 W 36 3.889 0 0.100 1.260 11.388 8.636 4.286 11.388 LGA I 37 I 37 3.751 0 0.671 1.200 7.363 8.182 4.773 7.363 LGA S 38 S 38 3.831 0 0.666 0.840 6.131 22.727 15.152 6.101 LGA S 39 S 39 2.988 0 0.610 0.750 6.151 38.636 25.758 6.151 LGA F 40 F 40 2.829 0 0.632 0.624 9.058 27.273 11.736 8.737 LGA I 41 I 41 3.069 0 0.088 0.578 4.150 13.182 18.409 2.153 LGA G 42 G 42 4.169 0 0.239 0.239 4.169 9.545 9.545 - LGA R 43 R 43 3.290 0 0.160 1.244 7.909 20.909 10.909 7.909 LGA S 44 S 44 0.933 0 0.042 0.715 2.860 62.273 56.970 2.860 LGA K 45 K 45 2.177 0 0.155 0.871 12.113 42.273 19.394 12.113 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.746 10.697 11.552 11.374 6.962 2.649 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.94 30.114 26.690 0.526 LGA_LOCAL RMSD: 2.940 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.095 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.746 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.374673 * X + -0.708244 * Y + 0.598340 * Z + -36.933636 Y_new = -0.590224 * X + 0.315493 * Y + 0.743034 * Z + -8.687199 Z_new = -0.715021 * X + -0.631549 * Y + -0.299816 * Z + 93.885612 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.005183 0.796655 -2.014025 [DEG: -57.5928 45.6450 -115.3951 ] ZXZ: 2.463648 1.875296 -2.294285 [DEG: 141.1567 107.4466 -131.4529 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS329_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS329_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.94 26.690 10.75 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS329_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT 1dab_A ATOM 9 N ALA 2 -0.794 45.980 19.131 1.00 0.00 ATOM 10 CA ALA 2 -2.131 45.534 18.896 1.00 0.00 ATOM 11 CB ALA 2 -3.005 45.542 20.160 1.00 0.00 ATOM 12 C ALA 2 -2.786 46.453 17.919 1.00 0.00 ATOM 13 O ALA 2 -2.470 47.639 17.840 1.00 0.00 ATOM 14 N VAL 3 -3.711 45.890 17.119 1.00 0.00 ATOM 15 CA VAL 3 -4.498 46.667 16.213 1.00 0.00 ATOM 16 CB VAL 3 -4.375 46.221 14.786 1.00 0.00 ATOM 17 CG1 VAL 3 -2.940 46.506 14.309 1.00 0.00 ATOM 18 CG2 VAL 3 -4.749 44.732 14.715 1.00 0.00 ATOM 19 C VAL 3 -5.912 46.455 16.658 1.00 0.00 ATOM 20 O VAL 3 -6.337 45.319 16.868 1.00 0.00 ATOM 21 N GLN 4 -6.683 47.547 16.824 1.00 0.00 ATOM 22 CA GLN 4 -8.009 47.406 17.352 1.00 0.00 ATOM 23 CB GLN 4 -8.335 48.364 18.513 1.00 0.00 ATOM 24 CG GLN 4 -7.522 48.100 19.783 1.00 0.00 ATOM 25 CD GLN 4 -8.122 48.935 20.910 1.00 0.00 ATOM 26 OE1 GLN 4 -8.149 48.513 22.064 1.00 0.00 ATOM 27 NE2 GLN 4 -8.621 50.153 20.568 1.00 0.00 ATOM 28 C GLN 4 -9.037 47.657 16.297 1.00 0.00 ATOM 29 O GLN 4 -8.746 48.153 15.209 1.00 0.00 ATOM 30 N GLY 5 -10.290 47.292 16.634 1.00 0.00 ATOM 31 CA GLY 5 -11.438 47.438 15.787 1.00 0.00 ATOM 32 C GLY 5 -11.657 48.887 15.477 1.00 0.00 ATOM 33 O GLY 5 -12.010 49.236 14.350 1.00 0.00 ATOM 34 N PRO 6 -11.491 49.748 16.440 1.00 0.00 ATOM 35 CA PRO 6 -11.676 51.146 16.164 1.00 0.00 ATOM 36 CD PRO 6 -11.878 49.421 17.806 1.00 0.00 ATOM 37 CB PRO 6 -11.768 51.833 17.525 1.00 0.00 ATOM 38 CG PRO 6 -12.357 50.741 18.434 1.00 0.00 ATOM 39 C PRO 6 -10.607 51.680 15.268 1.00 0.00 ATOM 40 O PRO 6 -10.789 52.761 14.710 1.00 0.00 ATOM 41 N TRP 7 -9.485 50.949 15.132 1.00 0.00 ATOM 42 CA TRP 7 -8.393 51.380 14.313 1.00 0.00 ATOM 43 CB TRP 7 -7.114 50.547 14.504 1.00 0.00 ATOM 44 CG TRP 7 -6.364 50.867 15.772 1.00 0.00 ATOM 45 CD2 TRP 7 -5.109 51.567 15.785 1.00 0.00 ATOM 46 CD1 TRP 7 -6.657 50.574 17.070 1.00 0.00 ATOM 47 NE1 TRP 7 -5.666 51.054 17.896 1.00 0.00 ATOM 48 CE2 TRP 7 -4.705 51.664 17.114 1.00 0.00 ATOM 49 CE3 TRP 7 -4.359 52.080 14.767 1.00 0.00 ATOM 50 CZ2 TRP 7 -3.532 52.280 17.450 1.00 0.00 ATOM 51 CZ3 TRP 7 -3.178 52.703 15.109 1.00 0.00 ATOM 52 CH2 TRP 7 -2.774 52.802 16.423 1.00 0.00 ATOM 53 C TRP 7 -8.789 51.288 12.877 1.00 0.00 ATOM 54 O TRP 7 -9.710 50.558 12.510 1.00 0.00 ATOM 55 N VAL 8 -8.108 52.090 12.039 1.00 0.00 ATOM 56 CA VAL 8 -8.349 52.121 10.627 1.00 0.00 ATOM 57 CB VAL 8 -7.826 53.356 9.955 1.00 0.00 ATOM 58 CG1 VAL 8 -6.303 53.420 10.168 1.00 0.00 ATOM 59 CG2 VAL 8 -8.238 53.313 8.472 1.00 0.00 ATOM 60 C VAL 8 -7.637 50.964 10.015 1.00 0.00 ATOM 61 O VAL 8 -6.659 50.460 10.564 1.00 0.00 ATOM 62 N GLY 9 -8.156 50.482 8.867 1.00 0.00 ATOM 63 CA GLY 9 -7.496 49.411 8.188 1.00 0.00 ATOM 64 C GLY 9 -6.242 49.979 7.618 1.00 0.00 ATOM 65 O GLY 9 -6.241 51.065 7.043 1.00 0.00 ATOM 66 N SER 10 -5.123 49.252 7.751 1.00 0.00 ATOM 67 CA SER 10 -3.911 49.787 7.219 1.00 0.00 ATOM 68 CB SER 10 -3.277 50.873 8.108 1.00 0.00 ATOM 69 OG SER 10 -4.129 52.012 8.179 1.00 0.00 ATOM 70 C SER 10 -2.948 48.660 7.165 1.00 0.00 ATOM 71 O SER 10 -3.166 47.611 7.767 1.00 0.00 ATOM 72 N SER 11 -1.850 48.837 6.416 1.00 0.00 ATOM 73 CA SER 11 -0.885 47.789 6.386 1.00 0.00 ATOM 74 CB SER 11 -0.359 47.481 4.974 1.00 0.00 ATOM 75 OG SER 11 -1.412 47.003 4.150 1.00 0.00 ATOM 76 C SER 11 0.268 48.277 7.186 1.00 0.00 ATOM 77 O SER 11 0.797 49.362 6.943 1.00 0.00 ATOM 78 N TYR 12 0.683 47.494 8.195 1.00 0.00 ATOM 79 CA TYR 12 1.828 47.916 8.938 1.00 0.00 ATOM 80 CB TYR 12 1.543 48.307 10.400 1.00 0.00 ATOM 81 CG TYR 12 0.929 49.668 10.378 1.00 0.00 ATOM 82 CD1 TYR 12 -0.408 49.855 10.105 1.00 0.00 ATOM 83 CD2 TYR 12 1.712 50.772 10.638 1.00 0.00 ATOM 84 CE1 TYR 12 -0.950 51.121 10.090 1.00 0.00 ATOM 85 CE2 TYR 12 1.178 52.039 10.624 1.00 0.00 ATOM 86 CZ TYR 12 -0.157 52.214 10.350 1.00 0.00 ATOM 87 OH TYR 12 -0.708 53.515 10.335 1.00 0.00 ATOM 88 C TYR 12 2.836 46.817 8.896 1.00 0.00 ATOM 89 O TYR 12 2.488 45.639 8.945 1.00 0.00 ATOM 90 N VAL 13 4.127 47.185 8.760 1.00 0.00 ATOM 91 CA VAL 13 5.138 46.169 8.701 1.00 0.00 ATOM 92 CB VAL 13 5.910 46.149 7.412 1.00 0.00 ATOM 93 CG1 VAL 13 6.756 47.430 7.314 1.00 0.00 ATOM 94 CG2 VAL 13 6.717 44.838 7.353 1.00 0.00 ATOM 95 C VAL 13 6.119 46.386 9.809 1.00 0.00 ATOM 96 O VAL 13 6.473 47.517 10.139 1.00 0.00 ATOM 97 N ALA 14 6.567 45.280 10.434 1.00 0.00 ATOM 98 CA ALA 14 7.536 45.344 11.485 1.00 0.00 ATOM 99 CB ALA 14 6.971 44.915 12.848 1.00 0.00 ATOM 100 C ALA 14 8.636 44.398 11.121 1.00 0.00 ATOM 101 O ALA 14 8.388 43.286 10.657 1.00 0.00 ATOM 102 N GLU 15 9.894 44.837 11.309 1.00 0.00 ATOM 103 CA GLU 15 11.004 43.991 10.984 1.00 0.00 ATOM 104 CB GLU 15 11.837 44.450 9.781 1.00 0.00 ATOM 105 CG GLU 15 13.012 43.509 9.499 1.00 0.00 ATOM 106 CD GLU 15 14.038 44.256 8.660 1.00 0.00 ATOM 107 OE1 GLU 15 14.877 44.975 9.263 1.00 0.00 ATOM 108 OE2 GLU 15 13.994 44.121 7.407 1.00 0.00 ATOM 109 C GLU 15 11.956 44.015 12.126 1.00 0.00 ATOM 110 O GLU 15 12.097 45.026 12.815 1.00 0.00 ATOM 111 N THR 16 12.647 42.878 12.329 1.00 0.00 ATOM 112 CA THR 16 13.641 42.770 13.349 1.00 0.00 ATOM 113 CB THR 16 14.845 43.622 13.047 1.00 0.00 ATOM 114 OG1 THR 16 15.356 43.277 11.766 1.00 0.00 ATOM 115 CG2 THR 16 15.929 43.375 14.109 1.00 0.00 ATOM 116 C THR 16 13.035 43.207 14.640 1.00 0.00 ATOM 117 O THR 16 13.589 44.028 15.367 1.00 0.00 ATOM 118 N GLY 17 11.846 42.668 14.962 1.00 0.00 ATOM 119 CA GLY 17 11.258 43.038 16.208 1.00 0.00 ATOM 120 C GLY 17 11.146 41.802 17.033 1.00 0.00 ATOM 121 O GLY 17 10.833 40.716 16.547 1.00 0.00 ATOM 122 N GLN 18 11.407 41.942 18.336 1.00 0.00 ATOM 123 CA GLN 18 11.304 40.818 19.204 1.00 0.00 ATOM 124 CB GLN 18 12.591 40.594 20.016 1.00 0.00 ATOM 125 CG GLN 18 12.544 39.423 20.997 1.00 0.00 ATOM 126 CD GLN 18 13.911 39.337 21.663 1.00 0.00 ATOM 127 OE1 GLN 18 14.923 39.114 20.998 1.00 0.00 ATOM 128 NE2 GLN 18 13.950 39.529 23.009 1.00 0.00 ATOM 129 C GLN 18 10.209 41.171 20.139 1.00 0.00 ATOM 130 O GLN 18 10.239 42.233 20.759 1.00 0.00 ATOM 131 N ASN 19 9.191 40.300 20.245 1.00 0.00 ATOM 132 CA ASN 19 8.125 40.623 21.130 1.00 0.00 ATOM 133 CB ASN 19 6.735 40.400 20.505 1.00 0.00 ATOM 134 CG ASN 19 6.448 41.516 19.505 1.00 0.00 ATOM 135 OD1 ASN 19 6.416 42.693 19.861 1.00 0.00 ATOM 136 ND2 ASN 19 6.227 41.139 18.216 1.00 0.00 ATOM 137 C ASN 19 8.270 39.711 22.298 1.00 0.00 ATOM 138 O ASN 19 8.353 38.496 22.140 1.00 0.00 ATOM 139 N TRP 20 8.362 40.295 23.507 1.00 0.00 ATOM 140 CA TRP 20 8.477 39.487 24.681 1.00 0.00 ATOM 141 CB TRP 20 9.879 39.553 25.310 1.00 0.00 ATOM 142 CG TRP 20 10.107 38.632 26.486 1.00 0.00 ATOM 143 CD2 TRP 20 10.786 37.370 26.394 1.00 0.00 ATOM 144 CD1 TRP 20 9.786 38.802 27.802 1.00 0.00 ATOM 145 NE1 TRP 20 10.212 37.719 28.532 1.00 0.00 ATOM 146 CE2 TRP 20 10.834 36.831 27.680 1.00 0.00 ATOM 147 CE3 TRP 20 11.333 36.716 25.326 1.00 0.00 ATOM 148 CZ2 TRP 20 11.430 35.626 27.917 1.00 0.00 ATOM 149 CZ3 TRP 20 11.928 35.498 25.567 1.00 0.00 ATOM 150 CH2 TRP 20 11.975 34.964 26.838 1.00 0.00 ATOM 151 C TRP 20 7.540 40.079 25.679 1.00 0.00 ATOM 152 O TRP 20 7.744 41.208 26.127 1.00 0.00 ATOM 153 N ALA 21 6.476 39.343 26.049 1.00 0.00 ATOM 154 CA ALA 21 5.600 39.878 27.050 1.00 0.00 ATOM 155 CB ALA 21 4.236 40.325 26.499 1.00 0.00 ATOM 156 C ALA 21 5.361 38.794 28.058 1.00 0.00 ATOM 157 O ALA 21 5.038 37.662 27.705 1.00 0.00 ATOM 158 N SER 22 5.639 39.096 29.339 1.00 0.00 ATOM 159 CA SER 22 5.395 38.198 30.437 1.00 0.00 ATOM 160 CB SER 22 6.495 38.247 31.511 1.00 0.00 ATOM 161 OG SER 22 6.534 39.528 32.118 1.00 0.00 ATOM 162 C SER 22 4.078 38.482 31.108 1.00 0.00 ATOM 163 O SER 22 3.602 37.668 31.898 1.00 0.00 ATOM 164 N LEU 23 3.454 39.641 30.810 1.00 0.00 ATOM 165 CA LEU 23 2.291 40.110 31.520 1.00 0.00 ATOM 166 CB LEU 23 1.774 41.459 30.994 1.00 0.00 ATOM 167 CG LEU 23 2.826 42.584 31.021 1.00 0.00 ATOM 168 CD1 LEU 23 3.299 42.865 32.452 1.00 0.00 ATOM 169 CD2 LEU 23 3.982 42.306 30.044 1.00 0.00 ATOM 170 C LEU 23 1.170 39.142 31.351 1.00 0.00 ATOM 171 O LEU 23 1.107 38.403 30.371 1.00 0.00 ATOM 172 N ALA 24 0.261 39.110 32.345 1.00 0.00 ATOM 173 CA ALA 24 -0.861 38.225 32.256 1.00 0.00 ATOM 174 CB ALA 24 -1.667 38.123 33.561 1.00 0.00 ATOM 175 C ALA 24 -1.772 38.741 31.189 1.00 0.00 ATOM 176 O ALA 24 -1.933 39.948 31.017 1.00 0.00 ATOM 177 N ALA 25 -2.371 37.803 30.432 1.00 0.00 ATOM 178 CA ALA 25 -3.319 38.070 29.387 1.00 0.00 ATOM 179 CB ALA 25 -4.650 38.641 29.905 1.00 0.00 ATOM 180 C ALA 25 -2.755 39.024 28.400 1.00 0.00 ATOM 181 O ALA 25 -3.491 39.815 27.817 1.00 0.00 ATOM 182 N ASN 26 -1.439 38.963 28.153 1.00 0.00 ATOM 183 CA ASN 26 -0.903 39.890 27.207 1.00 0.00 ATOM 184 CB ASN 26 0.255 40.737 27.758 1.00 0.00 ATOM 185 CG ASN 26 0.605 41.763 26.692 1.00 0.00 ATOM 186 OD1 ASN 26 -0.140 41.951 25.731 1.00 0.00 ATOM 187 ND2 ASN 26 1.773 42.444 26.855 1.00 0.00 ATOM 188 C ASN 26 -0.350 39.119 26.064 1.00 0.00 ATOM 189 O ASN 26 0.534 38.280 26.239 1.00 0.00 ATOM 190 N GLU 27 -0.892 39.378 24.857 1.00 0.00 ATOM 191 CA GLU 27 -0.365 38.795 23.667 1.00 0.00 ATOM 192 CB GLU 27 -1.386 38.660 22.523 1.00 0.00 ATOM 193 CG GLU 27 -2.184 37.357 22.540 1.00 0.00 ATOM 194 CD GLU 27 -2.847 37.190 23.893 1.00 0.00 ATOM 195 OE1 GLU 27 -3.806 37.948 24.187 1.00 0.00 ATOM 196 OE2 GLU 27 -2.399 36.289 24.656 1.00 0.00 ATOM 197 C GLU 27 0.708 39.696 23.168 1.00 0.00 ATOM 198 O GLU 27 0.687 40.904 23.419 1.00 0.00 ATOM 199 N LEU 28 1.717 39.109 22.494 1.00 0.00 ATOM 200 CA LEU 28 2.691 39.971 21.913 1.00 0.00 ATOM 201 CB LEU 28 4.027 39.339 21.454 1.00 0.00 ATOM 202 CG LEU 28 5.083 39.120 22.575 1.00 0.00 ATOM 203 CD1 LEU 28 5.376 40.424 23.338 1.00 0.00 ATOM 204 CD2 LEU 28 4.794 37.941 23.504 1.00 0.00 ATOM 205 C LEU 28 2.042 40.696 20.783 1.00 0.00 ATOM 206 O LEU 28 2.265 41.893 20.624 1.00 0.00 ATOM 207 N ARG 29 1.208 40.009 19.967 1.00 0.00 ATOM 208 CA ARG 29 0.569 40.728 18.898 1.00 0.00 ATOM 209 CB ARG 29 1.193 40.457 17.516 1.00 0.00 ATOM 210 CG ARG 29 0.925 41.550 16.475 1.00 0.00 ATOM 211 CD ARG 29 -0.326 41.332 15.618 1.00 0.00 ATOM 212 NE ARG 29 -0.318 42.380 14.556 1.00 0.00 ATOM 213 CZ ARG 29 -0.974 43.562 14.739 1.00 0.00 ATOM 214 NH1 ARG 29 -1.693 43.768 15.881 1.00 0.00 ATOM 215 NH2 ARG 29 -0.919 44.530 13.781 1.00 0.00 ATOM 216 C ARG 29 -0.873 40.329 18.855 1.00 0.00 ATOM 217 O ARG 29 -1.204 39.145 18.858 1.00 0.00 ATOM 218 N VAL 30 -1.781 41.323 18.834 1.00 0.00 ATOM 219 CA VAL 30 -3.169 40.979 18.743 1.00 0.00 ATOM 220 CB VAL 30 -3.954 41.294 19.988 1.00 0.00 ATOM 221 CG1 VAL 30 -5.436 40.964 19.740 1.00 0.00 ATOM 222 CG2 VAL 30 -3.336 40.523 21.168 1.00 0.00 ATOM 223 C VAL 30 -3.749 41.771 17.609 1.00 0.00 ATOM 224 O VAL 30 -3.601 42.993 17.559 1.00 0.00 ATOM 225 N THR 31 -4.421 41.083 16.661 1.00 0.00 ATOM 226 CA THR 31 -5.012 41.760 15.542 1.00 0.00 ATOM 227 CB THR 31 -4.590 41.212 14.218 1.00 0.00 ATOM 228 OG1 THR 31 -5.082 39.891 14.071 1.00 0.00 ATOM 229 CG2 THR 31 -3.054 41.210 14.166 1.00 0.00 ATOM 230 C THR 31 -6.500 41.599 15.645 1.00 0.00 ATOM 231 O THR 31 -7.036 40.494 15.602 1.00 0.00 ATOM 232 N GLU 32 -7.163 42.729 15.936 1.00 0.00 ATOM 233 CA GLU 32 -8.573 42.943 16.093 1.00 0.00 ATOM 234 CB GLU 32 -8.842 43.905 17.255 1.00 0.00 ATOM 235 CG GLU 32 -8.412 43.246 18.569 1.00 0.00 ATOM 236 CD GLU 32 -8.166 44.312 19.624 1.00 0.00 ATOM 237 OE1 GLU 32 -9.091 45.125 19.885 1.00 0.00 ATOM 238 OE2 GLU 32 -7.038 44.321 20.188 1.00 0.00 ATOM 239 C GLU 32 -9.344 43.375 14.862 1.00 0.00 ATOM 240 O GLU 32 -10.572 43.389 14.918 1.00 0.00 ATOM 241 N ARG 33 -8.700 43.859 13.771 1.00 0.00 ATOM 242 CA ARG 33 -9.520 44.351 12.679 1.00 0.00 ATOM 243 CB ARG 33 -9.327 45.838 12.337 1.00 0.00 ATOM 244 CG ARG 33 -10.095 46.787 13.252 1.00 0.00 ATOM 245 CD ARG 33 -11.574 46.944 12.890 1.00 0.00 ATOM 246 NE ARG 33 -11.657 47.730 11.628 1.00 0.00 ATOM 247 CZ ARG 33 -12.821 48.359 11.301 1.00 0.00 ATOM 248 NH1 ARG 33 -13.906 48.248 12.121 1.00 0.00 ATOM 249 NH2 ARG 33 -12.895 49.121 10.169 1.00 0.00 ATOM 250 C ARG 33 -9.266 43.611 11.405 1.00 0.00 ATOM 251 O ARG 33 -8.134 43.303 11.032 1.00 0.00 ATOM 252 N PRO 34 -10.346 43.336 10.721 1.00 0.00 ATOM 253 CA PRO 34 -10.318 42.630 9.469 1.00 0.00 ATOM 254 CD PRO 34 -11.670 43.383 11.311 1.00 0.00 ATOM 255 CB PRO 34 -11.776 42.263 9.168 1.00 0.00 ATOM 256 CG PRO 34 -12.610 43.141 10.121 1.00 0.00 ATOM 257 C PRO 34 -9.631 43.388 8.374 1.00 0.00 ATOM 258 O PRO 34 -9.053 42.767 7.484 1.00 0.00 ATOM 259 N PHE 35 -9.714 44.728 8.410 1.00 0.00 ATOM 260 CA PHE 35 -9.147 45.584 7.411 1.00 0.00 ATOM 261 CB PHE 35 -9.673 47.025 7.510 1.00 0.00 ATOM 262 CG PHE 35 -11.153 46.910 7.382 1.00 0.00 ATOM 263 CD1 PHE 35 -11.743 46.780 6.146 1.00 0.00 ATOM 264 CD2 PHE 35 -11.951 46.894 8.503 1.00 0.00 ATOM 265 CE1 PHE 35 -13.108 46.663 6.025 1.00 0.00 ATOM 266 CE2 PHE 35 -13.316 46.777 8.387 1.00 0.00 ATOM 267 CZ PHE 35 -13.897 46.662 7.148 1.00 0.00 ATOM 268 C PHE 35 -7.654 45.621 7.529 1.00 0.00 ATOM 269 O PHE 35 -6.948 45.770 6.533 1.00 0.00 ATOM 270 N TRP 36 -7.131 45.515 8.763 1.00 0.00 ATOM 271 CA TRP 36 -5.725 45.717 8.977 1.00 0.00 ATOM 272 CB TRP 36 -5.437 46.158 10.431 1.00 0.00 ATOM 273 CG TRP 36 -4.069 46.718 10.759 1.00 0.00 ATOM 274 CD2 TRP 36 -3.870 47.734 11.758 1.00 0.00 ATOM 275 CD1 TRP 36 -2.839 46.458 10.235 1.00 0.00 ATOM 276 NE1 TRP 36 -1.886 47.239 10.841 1.00 0.00 ATOM 277 CE2 TRP 36 -2.506 48.030 11.781 1.00 0.00 ATOM 278 CE3 TRP 36 -4.753 48.365 12.582 1.00 0.00 ATOM 279 CZ2 TRP 36 -2.002 48.971 12.632 1.00 0.00 ATOM 280 CZ3 TRP 36 -4.242 49.310 13.444 1.00 0.00 ATOM 281 CH2 TRP 36 -2.893 49.606 13.466 1.00 0.00 ATOM 282 C TRP 36 -4.954 44.481 8.635 1.00 0.00 ATOM 283 O TRP 36 -5.487 43.371 8.643 1.00 0.00 ATOM 284 N ILE 37 -3.681 44.676 8.227 1.00 0.00 ATOM 285 CA ILE 37 -2.779 43.590 7.985 1.00 0.00 ATOM 286 CB ILE 37 -2.487 43.305 6.538 1.00 0.00 ATOM 287 CG1 ILE 37 -1.753 44.483 5.880 1.00 0.00 ATOM 288 CG2 ILE 37 -3.808 42.924 5.855 1.00 0.00 ATOM 289 CD1 ILE 37 -1.093 44.107 4.553 1.00 0.00 ATOM 290 C ILE 37 -1.473 43.953 8.616 1.00 0.00 ATOM 291 O ILE 37 -1.080 45.120 8.620 1.00 0.00 ATOM 292 N SER 38 -0.764 42.955 9.176 1.00 0.00 ATOM 293 CA SER 38 0.496 43.241 9.798 1.00 0.00 ATOM 294 CB SER 38 0.516 42.921 11.303 1.00 0.00 ATOM 295 OG SER 38 1.787 43.241 11.845 1.00 0.00 ATOM 296 C SER 38 1.534 42.383 9.148 1.00 0.00 ATOM 297 O SER 38 1.353 41.178 8.966 1.00 0.00 ATOM 298 N SER 39 2.672 43.001 8.782 1.00 0.00 ATOM 299 CA SER 39 3.704 42.246 8.141 1.00 0.00 ATOM 300 CB SER 39 4.255 42.942 6.890 1.00 0.00 ATOM 301 OG SER 39 3.197 43.133 5.963 1.00 0.00 ATOM 302 C SER 39 4.817 42.135 9.114 1.00 0.00 ATOM 303 O SER 39 5.449 43.123 9.481 1.00 0.00 ATOM 304 N PHE 40 5.084 40.902 9.564 1.00 0.00 ATOM 305 CA PHE 40 6.136 40.692 10.503 1.00 0.00 ATOM 306 CB PHE 40 5.662 39.995 11.779 1.00 0.00 ATOM 307 CG PHE 40 5.285 41.011 12.793 1.00 0.00 ATOM 308 CD1 PHE 40 4.250 41.891 12.600 1.00 0.00 ATOM 309 CD2 PHE 40 5.986 41.043 13.974 1.00 0.00 ATOM 310 CE1 PHE 40 3.928 42.812 13.567 1.00 0.00 ATOM 311 CE2 PHE 40 5.664 41.961 14.941 1.00 0.00 ATOM 312 CZ PHE 40 4.636 42.849 14.741 1.00 0.00 ATOM 313 C PHE 40 7.185 39.844 9.881 1.00 0.00 ATOM 314 O PHE 40 6.932 38.727 9.433 1.00 0.00 ATOM 315 N ILE 41 8.415 40.378 9.831 1.00 0.00 ATOM 316 CA ILE 41 9.506 39.610 9.321 1.00 0.00 ATOM 317 CB ILE 41 10.047 40.106 8.002 1.00 0.00 ATOM 318 CG1 ILE 41 9.071 39.817 6.841 1.00 0.00 ATOM 319 CG2 ILE 41 11.432 39.467 7.800 1.00 0.00 ATOM 320 CD1 ILE 41 7.746 40.575 6.910 1.00 0.00 ATOM 321 C ILE 41 10.606 39.670 10.334 1.00 0.00 ATOM 322 O ILE 41 10.881 40.722 10.909 1.00 0.00 ATOM 323 N GLY 42 11.239 38.509 10.606 1.00 0.00 ATOM 324 CA GLY 42 12.378 38.454 11.480 1.00 0.00 ATOM 325 C GLY 42 11.990 38.871 12.865 1.00 0.00 ATOM 326 O GLY 42 12.739 39.596 13.520 1.00 0.00 ATOM 327 N ARG 43 10.820 38.412 13.352 1.00 0.00 ATOM 328 CA ARG 43 10.336 38.803 14.651 1.00 0.00 ATOM 329 CB ARG 43 9.152 39.780 14.598 1.00 0.00 ATOM 330 CG ARG 43 9.537 41.204 14.187 1.00 0.00 ATOM 331 CD ARG 43 8.578 42.234 14.782 1.00 0.00 ATOM 332 NE ARG 43 9.056 43.610 14.477 1.00 0.00 ATOM 333 CZ ARG 43 8.624 44.637 15.267 1.00 0.00 ATOM 334 NH1 ARG 43 7.732 44.390 16.269 1.00 0.00 ATOM 335 NH2 ARG 43 9.062 45.913 15.049 1.00 0.00 ATOM 336 C ARG 43 9.874 37.581 15.415 1.00 0.00 ATOM 337 O ARG 43 10.224 36.467 15.033 1.00 0.00 ATOM 338 N SER 44 9.118 37.782 16.544 1.00 0.00 ATOM 339 CA SER 44 8.658 36.706 17.418 1.00 0.00 ATOM 340 CB SER 44 9.675 36.434 18.537 1.00 0.00 ATOM 341 OG SER 44 9.783 37.581 19.366 1.00 0.00 ATOM 342 C SER 44 7.330 37.055 18.137 1.00 0.00 ATOM 343 O SER 44 7.085 38.246 18.333 1.00 0.00 ATOM 344 N LYS 45 6.471 36.034 18.555 1.00 0.00 ATOM 345 CA LYS 45 5.142 36.137 19.258 1.00 0.00 ATOM 346 CB LYS 45 4.063 36.782 18.377 1.00 0.00 ATOM 347 CG LYS 45 4.372 38.193 17.894 1.00 0.00 ATOM 348 CD LYS 45 3.503 38.591 16.702 1.00 0.00 ATOM 349 CE LYS 45 3.873 39.941 16.100 1.00 0.00 ATOM 350 NZ LYS 45 3.277 40.072 14.752 1.00 0.00 ATOM 351 C LYS 45 4.488 34.697 19.591 1.00 0.00 ATOM 352 O LYS 45 5.244 33.768 19.318 1.00 0.00 TER END