####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS324_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 4.70 13.63 LONGEST_CONTINUOUS_SEGMENT: 19 6 - 24 4.87 13.20 LCS_AVERAGE: 39.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 1.77 18.19 LCS_AVERAGE: 15.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 2 - 7 0.97 18.06 LONGEST_CONTINUOUS_SEGMENT: 6 14 - 19 0.85 16.36 LCS_AVERAGE: 10.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 6 6 10 3 4 6 6 8 10 15 15 18 19 21 22 23 25 25 26 27 28 31 31 LCS_GDT V 3 V 3 6 6 10 3 4 6 6 8 10 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT Q 4 Q 4 6 6 18 3 4 6 6 8 10 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT G 5 G 5 6 6 19 3 4 6 6 8 10 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT P 6 P 6 6 6 19 3 4 6 6 8 9 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT W 7 W 7 6 6 19 3 5 6 6 8 9 9 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT V 8 V 8 3 5 19 3 3 4 8 9 11 12 14 17 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT G 9 G 9 6 9 19 3 5 6 7 9 11 12 14 14 16 21 22 25 26 27 27 29 30 33 34 LCS_GDT S 10 S 10 6 9 19 3 5 7 8 9 11 12 14 14 16 19 21 25 26 27 27 29 30 33 34 LCS_GDT S 11 S 11 6 9 19 4 5 6 8 9 11 12 14 14 16 19 21 25 26 27 27 28 30 33 34 LCS_GDT Y 12 Y 12 6 9 19 4 5 6 6 9 9 12 14 14 14 17 21 25 26 27 27 28 30 33 34 LCS_GDT V 13 V 13 6 9 19 4 5 6 6 9 9 12 14 14 16 19 21 25 26 27 27 29 30 33 34 LCS_GDT A 14 A 14 6 9 19 4 5 7 8 9 11 12 14 14 16 18 21 25 26 27 27 28 30 33 34 LCS_GDT E 15 E 15 6 9 19 3 5 7 8 9 11 12 14 14 15 17 19 23 26 26 27 28 29 30 32 LCS_GDT T 16 T 16 6 9 19 4 5 7 8 9 11 12 14 14 15 17 21 25 26 27 27 28 30 33 34 LCS_GDT G 17 G 17 6 9 19 4 5 7 8 9 11 12 14 14 16 19 21 25 26 27 27 29 30 33 34 LCS_GDT Q 18 Q 18 6 8 19 4 5 7 8 9 11 12 14 14 16 19 21 25 26 27 27 29 30 33 34 LCS_GDT N 19 N 19 6 8 19 4 5 7 8 9 11 12 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT W 20 W 20 3 8 19 3 3 7 8 9 11 15 15 18 19 21 22 23 26 27 27 29 30 33 34 LCS_GDT A 21 A 21 4 8 19 3 4 4 6 7 10 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT S 22 S 22 4 5 19 3 3 4 6 6 10 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT L 23 L 23 4 5 19 3 3 4 6 7 10 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT A 24 A 24 4 5 19 3 4 4 6 7 8 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT A 25 A 25 4 5 18 3 4 4 5 6 10 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT N 26 N 26 4 5 17 3 4 4 6 6 8 15 15 18 19 21 22 23 25 26 27 29 30 33 34 LCS_GDT E 27 E 27 4 5 17 3 4 4 6 6 10 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT L 28 L 28 4 5 17 3 4 4 6 6 8 15 15 18 19 21 22 23 25 26 26 29 30 33 34 LCS_GDT R 29 R 29 4 5 17 3 4 4 6 7 8 10 13 13 16 19 22 25 26 27 27 29 30 33 34 LCS_GDT V 30 V 30 4 5 17 3 4 4 4 5 8 10 13 13 16 19 21 25 26 27 27 29 30 33 34 LCS_GDT T 31 T 31 4 7 17 3 4 4 5 5 8 10 13 13 14 17 21 25 26 27 27 28 30 31 32 LCS_GDT E 32 E 32 4 7 17 3 4 4 5 6 8 10 13 13 14 16 19 19 23 25 25 26 29 30 31 LCS_GDT R 33 R 33 3 7 17 3 3 4 5 6 8 10 13 13 13 14 15 15 16 18 22 25 26 27 29 LCS_GDT P 34 P 34 3 7 17 3 3 4 5 6 8 9 11 12 13 14 14 15 17 22 23 26 27 28 29 LCS_GDT F 35 F 35 3 7 17 3 3 4 6 6 8 9 11 16 17 20 22 25 26 27 27 29 30 33 34 LCS_GDT W 36 W 36 3 7 15 3 3 4 6 6 8 9 11 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT I 37 I 37 3 7 15 3 3 4 6 8 8 9 11 17 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT S 38 S 38 5 6 15 3 5 5 6 8 8 15 15 18 19 21 22 25 26 27 27 29 30 33 34 LCS_GDT S 39 S 39 5 6 15 3 5 5 6 8 8 9 11 16 17 21 22 25 26 27 27 29 30 33 34 LCS_GDT F 40 F 40 5 6 15 3 5 5 6 7 7 9 10 11 12 14 14 15 15 24 26 28 30 32 34 LCS_GDT I 41 I 41 5 6 15 4 5 5 6 7 7 9 10 12 15 19 21 25 26 27 27 29 30 33 34 LCS_GDT G 42 G 42 5 6 15 4 5 5 6 8 9 9 11 12 13 15 19 22 23 27 27 28 30 30 31 LCS_GDT R 43 R 43 4 5 15 4 4 4 6 8 9 9 11 12 13 14 14 15 15 16 23 26 27 30 31 LCS_GDT S 44 S 44 4 5 15 4 4 4 6 8 9 9 11 12 13 14 14 15 15 16 16 17 21 22 24 LCS_GDT K 45 K 45 3 5 15 0 3 4 5 8 9 9 11 12 13 14 14 15 15 16 16 17 18 19 19 LCS_AVERAGE LCS_A: 21.63 ( 10.69 15.13 39.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 8 9 11 15 15 18 19 21 22 25 26 27 27 29 30 33 34 GDT PERCENT_AT 9.09 11.36 15.91 18.18 20.45 25.00 34.09 34.09 40.91 43.18 47.73 50.00 56.82 59.09 61.36 61.36 65.91 68.18 75.00 77.27 GDT RMS_LOCAL 0.15 0.38 0.99 1.11 1.36 1.82 2.83 2.83 3.30 3.43 3.68 4.17 4.95 5.07 5.30 5.21 5.64 5.86 6.44 6.58 GDT RMS_ALL_AT 15.99 20.40 16.47 16.27 15.84 15.66 12.21 12.21 11.99 11.99 11.77 11.27 9.65 9.63 9.57 9.74 10.35 9.45 9.96 9.89 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 2.325 0 0.088 0.110 4.287 25.000 36.364 - LGA V 3 V 3 2.794 0 0.040 1.075 6.295 39.545 22.857 6.295 LGA Q 4 Q 4 2.268 0 0.216 1.002 7.650 50.909 24.646 4.678 LGA G 5 G 5 2.944 0 0.126 0.126 4.169 19.545 19.545 - LGA P 6 P 6 3.229 0 0.658 0.616 3.533 18.182 17.143 3.042 LGA W 7 W 7 5.702 0 0.473 1.230 15.318 0.455 0.130 15.046 LGA V 8 V 8 6.980 0 0.654 1.340 8.250 0.000 0.000 7.365 LGA G 9 G 9 10.216 0 0.501 0.501 11.528 0.000 0.000 - LGA S 10 S 10 14.623 0 0.169 0.553 17.455 0.000 0.000 15.446 LGA S 11 S 11 18.875 0 0.302 0.301 22.117 0.000 0.000 22.117 LGA Y 12 Y 12 17.354 0 0.100 0.914 18.356 0.000 0.000 17.129 LGA V 13 V 13 15.117 0 0.426 1.228 16.867 0.000 0.000 13.743 LGA A 14 A 14 20.943 0 0.306 0.293 24.311 0.000 0.000 - LGA E 15 E 15 23.432 0 0.085 1.381 28.355 0.000 0.000 27.445 LGA T 16 T 16 19.164 0 0.151 0.250 20.125 0.000 0.000 14.926 LGA G 17 G 17 17.731 0 0.147 0.147 18.063 0.000 0.000 - LGA Q 18 Q 18 11.200 0 0.077 1.419 13.639 0.000 0.000 12.703 LGA N 19 N 19 5.989 0 0.531 1.191 11.347 7.273 3.636 10.687 LGA W 20 W 20 2.798 0 0.265 1.100 10.455 25.909 7.403 10.434 LGA A 21 A 21 2.293 0 0.487 0.459 4.593 44.545 36.000 - LGA S 22 S 22 2.795 0 0.155 0.700 4.341 30.909 23.333 4.341 LGA L 23 L 23 2.466 0 0.513 1.009 3.292 38.182 39.091 3.292 LGA A 24 A 24 3.418 0 0.456 0.428 4.698 23.182 18.909 - LGA A 25 A 25 2.757 0 0.587 0.562 5.096 42.727 34.182 - LGA N 26 N 26 3.503 0 0.304 0.434 6.411 23.636 11.818 5.778 LGA E 27 E 27 1.934 0 0.434 1.036 4.238 48.182 29.697 4.123 LGA L 28 L 28 3.208 0 0.551 0.842 6.840 14.091 23.864 4.277 LGA R 29 R 29 10.431 0 0.633 1.271 15.509 0.000 0.000 15.509 LGA V 30 V 30 13.001 0 0.208 0.939 16.098 0.000 0.000 12.768 LGA T 31 T 31 17.580 0 0.682 0.578 19.713 0.000 0.000 18.713 LGA E 32 E 32 16.720 0 0.203 0.911 17.173 0.000 0.000 15.970 LGA R 33 R 33 14.552 0 0.195 1.488 15.636 0.000 0.000 15.113 LGA P 34 P 34 9.965 0 0.108 0.296 13.942 0.000 0.000 11.908 LGA F 35 F 35 4.295 0 0.244 1.458 5.831 3.182 14.876 4.498 LGA W 36 W 36 5.755 0 0.253 0.935 16.237 15.455 4.416 16.237 LGA I 37 I 37 6.808 0 0.540 1.441 12.751 0.000 0.000 12.751 LGA S 38 S 38 3.170 0 0.414 0.408 4.528 10.909 18.182 2.365 LGA S 39 S 39 5.178 0 0.173 0.245 8.546 1.364 0.909 7.438 LGA F 40 F 40 9.618 0 0.395 0.749 16.920 0.000 0.000 16.920 LGA I 41 I 41 8.467 0 0.384 0.354 11.422 0.000 2.500 3.387 LGA G 42 G 42 14.066 0 0.171 0.171 18.162 0.000 0.000 - LGA R 43 R 43 19.201 0 0.049 0.862 25.294 0.000 0.000 25.294 LGA S 44 S 44 24.727 0 0.213 0.196 26.927 0.000 0.000 26.029 LGA K 45 K 45 26.072 0 0.163 0.438 27.460 0.000 0.000 26.644 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.379 9.477 10.522 10.981 8.852 3.325 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.83 31.250 28.784 0.512 LGA_LOCAL RMSD: 2.829 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.210 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.379 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.335215 * X + 0.557726 * Y + 0.759324 * Z + -11.837822 Y_new = -0.874255 * X + 0.484536 * Y + 0.030060 * Z + 62.478790 Z_new = -0.351154 * X + -0.673919 * Y + 0.650018 * Z + 15.427896 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.204656 0.358803 -0.803450 [DEG: -69.0217 20.5579 -46.0343 ] ZXZ: 1.610364 0.863188 -2.661237 [DEG: 92.2671 49.4570 -152.4777 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS324_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.83 28.784 9.38 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS324_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 4peuA ATOM 12 N ALA 2 9.364 38.874 14.456 1.00 12.81 N ATOM 14 CA ALA 2 10.467 38.580 13.536 1.00 12.81 C ATOM 15 CB ALA 2 11.200 37.307 13.950 1.00 12.81 C ATOM 16 C ALA 2 9.690 38.353 12.248 1.00 12.81 C ATOM 17 O ALA 2 8.612 37.747 12.267 1.00 12.81 O ATOM 18 N VAL 3 10.210 38.888 11.144 1.00 10.37 N ATOM 20 CA VAL 3 9.557 38.787 9.843 1.00 10.37 C ATOM 21 CB VAL 3 9.715 40.160 9.050 1.00 10.37 C ATOM 22 CG1 VAL 3 11.185 40.436 8.675 1.00 10.37 C ATOM 23 CG2 VAL 3 8.788 40.234 7.831 1.00 10.37 C ATOM 24 C VAL 3 10.096 37.578 9.058 1.00 10.37 C ATOM 25 O VAL 3 11.312 37.436 8.859 1.00 10.37 O ATOM 26 N GLN 4 9.183 36.653 8.755 1.00 10.04 N ATOM 28 CA GLN 4 9.497 35.481 7.947 1.00 10.04 C ATOM 29 CB GLN 4 9.571 34.192 8.755 1.00 10.04 C ATOM 30 CG GLN 4 10.603 33.213 8.185 1.00 10.04 C ATOM 31 CD GLN 4 10.944 32.069 9.123 1.00 10.04 C ATOM 32 OE1 GLN 4 11.698 32.238 10.083 1.00 10.04 O ATOM 33 NE2 GLN 4 10.399 30.890 8.841 1.00 10.04 N ATOM 36 C GLN 4 8.367 35.460 6.961 1.00 10.04 C ATOM 37 O GLN 4 7.289 34.928 7.232 1.00 10.04 O ATOM 38 N GLY 5 8.692 35.962 5.781 1.00 8.80 N ATOM 40 CA GLY 5 7.732 36.113 4.724 1.00 8.80 C ATOM 41 C GLY 5 8.041 35.567 3.357 1.00 8.80 C ATOM 42 O GLY 5 8.987 34.794 3.186 1.00 8.80 O ATOM 43 N PRO 6 7.202 35.945 2.359 1.00 8.24 N ATOM 44 CD PRO 6 7.691 36.192 0.988 1.00 8.24 C ATOM 45 CA PRO 6 6.059 36.834 2.626 1.00 8.24 C ATOM 46 CB PRO 6 6.118 37.851 1.480 1.00 8.24 C ATOM 47 CG PRO 6 7.494 37.684 0.885 1.00 8.24 C ATOM 48 C PRO 6 4.669 36.224 2.710 1.00 8.24 C ATOM 49 O PRO 6 4.454 35.057 2.359 1.00 8.24 O ATOM 50 N TRP 7 3.755 37.046 3.230 1.00 7.63 N ATOM 52 CA TRP 7 2.337 36.750 3.344 1.00 7.63 C ATOM 53 CB TRP 7 1.814 36.905 4.780 1.00 7.63 C ATOM 54 CG TRP 7 1.652 38.365 5.365 1.00 7.63 C ATOM 55 CD2 TRP 7 0.468 39.201 5.347 1.00 7.63 C ATOM 56 CE2 TRP 7 0.807 40.423 5.997 1.00 7.63 C ATOM 57 CE3 TRP 7 -0.840 39.041 4.846 1.00 7.63 C ATOM 58 CD1 TRP 7 2.611 39.108 6.009 1.00 7.63 C ATOM 59 NE1 TRP 7 2.115 40.329 6.386 1.00 7.63 N ATOM 61 CZ2 TRP 7 -0.118 41.482 6.158 1.00 7.63 C ATOM 62 CZ3 TRP 7 -1.769 40.100 5.005 1.00 7.63 C ATOM 63 CH2 TRP 7 -1.393 41.305 5.658 1.00 7.63 C ATOM 64 C TRP 7 1.774 37.870 2.496 1.00 7.63 C ATOM 65 O TRP 7 2.377 38.950 2.391 1.00 7.63 O ATOM 66 N VAL 8 0.620 37.606 1.907 1.00 7.78 N ATOM 68 CA VAL 8 -0.081 38.561 1.074 1.00 7.78 C ATOM 69 CB VAL 8 0.032 38.240 -0.441 1.00 7.78 C ATOM 70 CG1 VAL 8 1.386 38.717 -0.922 1.00 7.78 C ATOM 71 CG2 VAL 8 -0.137 36.732 -0.736 1.00 7.78 C ATOM 72 C VAL 8 -1.497 38.740 1.556 1.00 7.78 C ATOM 73 O VAL 8 -2.002 37.889 2.296 1.00 7.78 O ATOM 74 N GLY 9 -2.113 39.859 1.163 1.00 9.94 N ATOM 76 CA GLY 9 -3.458 40.218 1.577 1.00 9.94 C ATOM 77 C GLY 9 -4.444 39.085 1.720 1.00 9.94 C ATOM 78 O GLY 9 -4.321 38.042 1.064 1.00 9.94 O ATOM 79 N SER 10 -5.460 39.339 2.538 1.00 12.09 N ATOM 81 CA SER 10 -6.448 38.331 2.890 1.00 12.09 C ATOM 82 CB SER 10 -6.916 38.592 4.317 1.00 12.09 C ATOM 83 OG SER 10 -5.821 38.647 5.198 1.00 12.09 O ATOM 85 C SER 10 -7.672 38.166 2.008 1.00 12.09 C ATOM 86 O SER 10 -8.555 37.364 2.343 1.00 12.09 O ATOM 87 N SER 11 -7.691 38.812 0.838 1.00 14.30 N ATOM 89 CA SER 11 -8.864 38.678 -0.014 1.00 14.30 C ATOM 90 OG SER 11 -10.601 40.046 -1.063 1.00 14.30 O ATOM 92 C SER 11 -8.633 37.974 -1.358 1.00 14.30 C ATOM 93 O SER 11 -9.490 38.051 -2.251 1.00 14.30 O ATOM 94 CB SER 11 -9.467 40.075 -0.224 1.00 14.30 C ATOM 95 N TYR 12 -7.517 37.246 -1.499 1.00 13.22 N ATOM 97 CA TYR 12 -7.333 36.446 -2.711 1.00 13.22 C ATOM 98 CB TYR 12 -6.090 36.883 -3.515 1.00 13.22 C ATOM 99 CG TYR 12 -6.090 36.516 -5.010 1.00 13.22 C ATOM 100 CD1 TYR 12 -6.612 37.405 -5.982 1.00 13.22 C ATOM 101 CE1 TYR 12 -6.581 37.085 -7.369 1.00 13.22 C ATOM 102 CD2 TYR 12 -5.535 35.292 -5.464 1.00 13.22 C ATOM 103 CE2 TYR 12 -5.499 34.965 -6.848 1.00 13.22 C ATOM 104 CZ TYR 12 -6.024 35.867 -7.789 1.00 13.22 C ATOM 105 OH TYR 12 -5.995 35.556 -9.129 1.00 13.22 O ATOM 107 C TYR 12 -7.203 35.001 -2.270 1.00 13.22 C ATOM 108 O TYR 12 -7.275 34.081 -3.106 1.00 13.22 O ATOM 109 N VAL 13 -7.148 34.801 -0.942 1.00 12.81 N ATOM 111 CA VAL 13 -7.094 33.449 -0.412 1.00 12.81 C ATOM 112 CB VAL 13 -5.680 33.145 0.256 1.00 12.81 C ATOM 113 CG1 VAL 13 -4.621 33.000 -0.823 1.00 12.81 C ATOM 114 CG2 VAL 13 -5.257 34.250 1.253 1.00 12.81 C ATOM 115 C VAL 13 -8.294 33.297 0.544 1.00 12.81 C ATOM 116 O VAL 13 -8.185 32.737 1.651 1.00 12.81 O ATOM 117 N ALA 14 -9.466 33.691 0.021 1.00 15.69 N ATOM 119 CA ALA 14 -10.753 33.496 0.692 1.00 15.69 C ATOM 120 CB ALA 14 -11.554 34.785 0.669 1.00 15.69 C ATOM 121 C ALA 14 -11.358 32.457 -0.259 1.00 15.69 C ATOM 122 O ALA 14 -12.577 32.242 -0.301 1.00 15.69 O ATOM 123 N GLU 15 -10.443 31.793 -0.977 1.00 15.68 N ATOM 125 CA GLU 15 -10.718 30.750 -1.963 1.00 15.68 C ATOM 126 CB GLU 15 -9.919 31.006 -3.243 1.00 15.68 C ATOM 127 CG GLU 15 -10.432 32.175 -4.069 1.00 15.68 C ATOM 128 CD GLU 15 -9.621 32.404 -5.331 1.00 15.68 C ATOM 129 OE1 GLU 15 -8.639 33.174 -5.278 1.00 15.68 O ATOM 130 OE2 GLU 15 -9.967 31.815 -6.378 1.00 15.68 O ATOM 131 C GLU 15 -10.302 29.442 -1.333 1.00 15.68 C ATOM 132 O GLU 15 -10.768 28.366 -1.716 1.00 15.68 O ATOM 133 N THR 16 -9.417 29.579 -0.340 1.00 13.47 N ATOM 135 CA THR 16 -8.882 28.472 0.445 1.00 13.47 C ATOM 136 CB THR 16 -7.386 28.694 0.795 1.00 13.47 C ATOM 137 OG1 THR 16 -7.199 30.018 1.312 1.00 13.47 O ATOM 139 CG2 THR 16 -6.518 28.501 -0.446 1.00 13.47 C ATOM 140 C THR 16 -9.776 28.387 1.683 1.00 13.47 C ATOM 141 O THR 16 -10.097 27.289 2.142 1.00 13.47 O ATOM 142 N GLY 17 -10.228 29.560 2.158 1.00 13.99 N ATOM 144 CA GLY 17 -11.138 29.691 3.297 1.00 13.99 C ATOM 145 C GLY 17 -10.779 29.079 4.627 1.00 13.99 C ATOM 146 O GLY 17 -11.268 29.526 5.672 1.00 13.99 O ATOM 147 N GLN 18 -9.917 28.060 4.571 1.00 14.32 N ATOM 149 CA GLN 18 -9.432 27.344 5.740 1.00 14.32 C ATOM 150 CB GLN 18 -8.633 26.088 5.350 1.00 14.32 C ATOM 151 CG GLN 18 -7.446 26.291 4.391 1.00 14.32 C ATOM 152 CD GLN 18 -6.727 24.994 4.072 1.00 14.32 C ATOM 153 OE1 GLN 18 -7.047 24.320 3.093 1.00 14.32 O ATOM 154 NE2 GLN 18 -5.748 24.640 4.898 1.00 14.32 N ATOM 157 C GLN 18 -8.553 28.345 6.437 1.00 14.32 C ATOM 158 O GLN 18 -7.876 29.147 5.778 1.00 14.32 O ATOM 159 N ASN 19 -8.558 28.310 7.760 1.00 13.55 N ATOM 161 CA ASN 19 -7.774 29.273 8.469 1.00 13.55 C ATOM 162 CB ASN 19 -8.464 29.693 9.763 1.00 13.55 C ATOM 163 CG ASN 19 -9.758 30.468 9.496 1.00 13.55 C ATOM 164 OD1 ASN 19 -9.751 31.696 9.394 1.00 13.55 O ATOM 165 ND2 ASN 19 -10.874 29.749 9.406 1.00 13.55 N ATOM 168 C ASN 19 -6.283 28.982 8.551 1.00 13.55 C ATOM 169 O ASN 19 -5.762 28.425 9.514 1.00 13.55 O ATOM 170 N TRP 20 -5.648 29.327 7.420 1.00 12.55 N ATOM 172 CA TRP 20 -4.200 29.312 7.183 1.00 12.55 C ATOM 173 CB TRP 20 -3.777 29.632 5.755 1.00 12.55 C ATOM 174 CG TRP 20 -2.533 28.849 5.235 1.00 12.55 C ATOM 175 CD2 TRP 20 -2.070 28.774 3.870 1.00 12.55 C ATOM 176 CE2 TRP 20 -0.924 27.925 3.859 1.00 12.55 C ATOM 177 CE3 TRP 20 -2.508 29.341 2.649 1.00 12.55 C ATOM 178 CD1 TRP 20 -1.661 28.057 5.965 1.00 12.55 C ATOM 179 NE1 TRP 20 -0.708 27.510 5.145 1.00 12.55 N ATOM 181 CZ2 TRP 20 -0.207 27.627 2.674 1.00 12.55 C ATOM 182 CZ3 TRP 20 -1.791 29.043 1.463 1.00 12.55 C ATOM 183 CH2 TRP 20 -0.652 28.191 1.493 1.00 12.55 C ATOM 184 C TRP 20 -4.248 30.551 8.024 1.00 12.55 C ATOM 185 O TRP 20 -5.095 31.431 7.827 1.00 12.55 O ATOM 186 N ALA 21 -3.316 30.653 8.937 1.00 12.22 N ATOM 188 CA ALA 21 -3.441 31.583 10.024 1.00 12.22 C ATOM 189 CB ALA 21 -2.274 31.339 10.862 1.00 12.22 C ATOM 190 C ALA 21 -3.722 33.099 9.936 1.00 12.22 C ATOM 191 O ALA 21 -2.861 33.944 10.198 1.00 12.22 O ATOM 192 N SER 22 -5.019 33.379 9.656 1.00 13.80 N ATOM 194 CA SER 22 -5.625 34.737 9.622 1.00 13.80 C ATOM 195 CB SER 22 -6.847 34.780 8.720 1.00 13.80 C ATOM 196 OG SER 22 -7.580 35.977 8.949 1.00 13.80 O ATOM 198 C SER 22 -6.140 34.936 11.042 1.00 13.80 C ATOM 199 O SER 22 -6.550 36.029 11.454 1.00 13.80 O ATOM 200 N LEU 23 -5.882 33.878 11.807 1.00 13.77 N ATOM 202 CA LEU 23 -6.120 33.710 13.225 1.00 13.77 C ATOM 203 CB LEU 23 -6.456 32.235 13.559 1.00 13.77 C ATOM 204 CG LEU 23 -7.252 31.652 14.763 1.00 13.77 C ATOM 205 CD1 LEU 23 -6.528 31.842 16.108 1.00 13.77 C ATOM 206 CD2 LEU 23 -8.707 32.153 14.836 1.00 13.77 C ATOM 207 C LEU 23 -4.671 34.108 13.544 1.00 13.77 C ATOM 208 O LEU 23 -3.878 33.309 14.043 1.00 13.77 O ATOM 209 N ALA 24 -4.299 35.238 12.909 1.00 13.09 N ATOM 211 CA ALA 24 -2.985 35.898 12.917 1.00 13.09 C ATOM 212 CB ALA 24 -3.010 37.151 12.090 1.00 13.09 C ATOM 213 C ALA 24 -2.669 36.193 14.371 1.00 13.09 C ATOM 214 O ALA 24 -2.445 37.324 14.809 1.00 13.09 O ATOM 215 N ALA 25 -2.529 35.046 15.033 1.00 14.70 N ATOM 217 CA ALA 25 -2.273 34.780 16.437 1.00 14.70 C ATOM 218 CB ALA 25 -2.230 33.297 16.650 1.00 14.70 C ATOM 219 C ALA 25 -0.937 35.400 16.787 1.00 14.70 C ATOM 220 O ALA 25 0.129 34.825 16.512 1.00 14.70 O ATOM 221 N ASN 26 -1.022 36.651 17.255 1.00 15.07 N ATOM 223 CA ASN 26 0.135 37.485 17.603 1.00 15.07 C ATOM 224 CB ASN 26 -0.322 38.937 17.827 1.00 15.07 C ATOM 225 CG ASN 26 -1.358 39.403 16.807 1.00 15.07 C ATOM 226 OD1 ASN 26 -1.063 39.564 15.619 1.00 15.07 O ATOM 227 ND2 ASN 26 -2.583 39.621 17.272 1.00 15.07 N ATOM 230 C ASN 26 0.871 36.913 18.846 1.00 15.07 C ATOM 231 O ASN 26 1.603 37.606 19.552 1.00 15.07 O ATOM 232 N GLU 27 0.692 35.591 18.996 1.00 14.76 N ATOM 234 CA GLU 27 1.289 34.662 19.975 1.00 14.76 C ATOM 235 CG GLU 27 0.603 32.772 21.619 1.00 14.76 C ATOM 236 CD GLU 27 -0.565 31.995 22.196 1.00 14.76 C ATOM 237 OE1 GLU 27 -1.117 32.424 23.232 1.00 14.76 O ATOM 238 OE2 GLU 27 -0.930 30.949 21.616 1.00 14.76 O ATOM 239 C GLU 27 2.030 33.871 18.875 1.00 14.76 C ATOM 240 O GLU 27 1.914 32.641 18.751 1.00 14.76 O ATOM 241 CB GLU 27 0.167 33.826 20.608 1.00 14.76 C ATOM 242 N LEU 28 2.901 34.613 18.193 1.00 11.78 N ATOM 244 CA LEU 28 3.601 34.163 16.996 1.00 11.78 C ATOM 245 CB LEU 28 3.798 35.371 16.050 1.00 11.78 C ATOM 246 CG LEU 28 4.041 36.845 16.456 1.00 11.78 C ATOM 247 CD1 LEU 28 5.529 37.146 16.700 1.00 11.78 C ATOM 248 CD2 LEU 28 3.521 37.741 15.343 1.00 11.78 C ATOM 249 C LEU 28 4.850 33.303 16.918 1.00 11.78 C ATOM 250 O LEU 28 5.765 33.378 17.741 1.00 11.78 O ATOM 251 N ARG 29 4.796 32.468 15.874 1.00 13.12 N ATOM 253 CA ARG 29 5.825 31.553 15.391 1.00 13.12 C ATOM 254 CB ARG 29 5.264 30.141 15.209 1.00 13.12 C ATOM 255 CG ARG 29 5.105 29.361 16.509 1.00 13.12 C ATOM 256 CD ARG 29 4.543 27.960 16.278 1.00 13.12 C ATOM 257 NE ARG 29 5.491 27.068 15.602 1.00 13.12 N ATOM 259 CZ ARG 29 5.253 25.795 15.282 1.00 13.12 C ATOM 260 NH1 ARG 29 4.089 25.219 15.564 1.00 13.12 N ATOM 263 NH2 ARG 29 6.195 25.089 14.670 1.00 13.12 N ATOM 266 C ARG 29 6.034 32.228 14.029 1.00 13.12 C ATOM 267 O ARG 29 5.084 32.795 13.482 1.00 13.12 O ATOM 268 N VAL 30 7.232 32.149 13.458 1.00 12.43 N ATOM 270 CA VAL 30 7.507 32.856 12.200 1.00 12.43 C ATOM 271 CB VAL 30 8.865 33.635 12.284 1.00 12.43 C ATOM 272 CG1 VAL 30 8.691 34.867 13.133 1.00 12.43 C ATOM 273 CG2 VAL 30 10.000 32.752 12.847 1.00 12.43 C ATOM 274 C VAL 30 7.340 32.142 10.840 1.00 12.43 C ATOM 275 O VAL 30 8.267 31.501 10.336 1.00 12.43 O ATOM 276 N THR 31 6.088 32.135 10.362 1.00 13.14 N ATOM 278 CA THR 31 5.673 31.597 9.050 1.00 13.14 C ATOM 279 CB THR 31 4.929 30.221 9.153 1.00 13.14 C ATOM 280 OG1 THR 31 3.881 30.299 10.130 1.00 13.14 O ATOM 282 CG2 THR 31 5.894 29.122 9.544 1.00 13.14 C ATOM 283 C THR 31 4.708 32.672 8.544 1.00 13.14 C ATOM 284 O THR 31 3.737 32.985 9.240 1.00 13.14 O ATOM 285 N GLU 32 4.926 33.232 7.351 1.00 12.02 N ATOM 287 CA GLU 32 4.010 34.281 6.901 1.00 12.02 C ATOM 288 CB GLU 32 4.694 35.408 6.148 1.00 12.02 C ATOM 289 CG GLU 32 4.805 36.648 7.048 1.00 12.02 C ATOM 290 CD GLU 32 5.709 37.756 6.538 1.00 12.02 C ATOM 291 OE1 GLU 32 5.432 38.341 5.470 1.00 12.02 O ATOM 292 OE2 GLU 32 6.706 38.052 7.225 1.00 12.02 O ATOM 293 C GLU 32 2.620 33.939 6.381 1.00 12.02 C ATOM 294 O GLU 32 2.414 33.363 5.307 1.00 12.02 O ATOM 295 N ARG 33 1.704 34.266 7.290 1.00 10.31 N ATOM 297 CA ARG 33 0.257 34.130 7.257 1.00 10.31 C ATOM 298 CB ARG 33 -0.248 33.124 8.305 1.00 10.31 C ATOM 299 CG ARG 33 -0.001 31.624 7.974 1.00 10.31 C ATOM 300 CD ARG 33 -0.071 31.200 6.478 1.00 10.31 C ATOM 301 NE ARG 33 -1.297 31.635 5.799 1.00 10.31 N ATOM 303 CZ ARG 33 -1.356 32.124 4.559 1.00 10.31 C ATOM 304 NH1 ARG 33 -2.527 32.484 4.054 1.00 10.31 N ATOM 307 NH2 ARG 33 -0.258 32.259 3.819 1.00 10.31 N ATOM 310 C ARG 33 -0.370 35.521 7.398 1.00 10.31 C ATOM 311 O ARG 33 0.374 36.487 7.593 1.00 10.31 O ATOM 312 N PRO 34 -1.723 35.664 7.266 1.00 9.77 N ATOM 313 CD PRO 34 -2.726 34.679 6.794 1.00 9.77 C ATOM 314 CA PRO 34 -2.384 36.972 7.373 1.00 9.77 C ATOM 315 CB PRO 34 -3.849 36.616 7.290 1.00 9.77 C ATOM 316 CG PRO 34 -3.829 35.553 6.299 1.00 9.77 C ATOM 317 C PRO 34 -2.053 37.968 8.494 1.00 9.77 C ATOM 318 O PRO 34 -1.080 37.774 9.232 1.00 9.77 O ATOM 319 N PHE 35 -2.894 38.989 8.648 1.00 7.90 N ATOM 321 CA PHE 35 -2.553 40.160 9.441 1.00 7.90 C ATOM 322 CB PHE 35 -3.284 41.342 8.767 1.00 7.90 C ATOM 323 CG PHE 35 -4.804 41.186 8.683 1.00 7.90 C ATOM 324 CD1 PHE 35 -5.639 41.674 9.720 1.00 7.90 C ATOM 325 CD2 PHE 35 -5.415 40.601 7.550 1.00 7.90 C ATOM 326 CE1 PHE 35 -7.055 41.583 9.630 1.00 7.90 C ATOM 327 CE2 PHE 35 -6.832 40.504 7.447 1.00 7.90 C ATOM 328 CZ PHE 35 -7.652 40.997 8.490 1.00 7.90 C ATOM 329 C PHE 35 -2.577 40.509 10.924 1.00 7.90 C ATOM 330 O PHE 35 -3.422 40.114 11.726 1.00 7.90 O ATOM 331 N TRP 36 -1.411 41.097 11.203 1.00 6.80 N ATOM 333 CA TRP 36 -0.868 41.731 12.398 1.00 6.80 C ATOM 334 CB TRP 36 0.281 40.927 13.026 1.00 6.80 C ATOM 335 CG TRP 36 1.002 41.511 14.305 1.00 6.80 C ATOM 336 CD2 TRP 36 0.434 42.236 15.433 1.00 6.80 C ATOM 337 CE2 TRP 36 1.504 42.506 16.334 1.00 6.80 C ATOM 338 CE3 TRP 36 -0.867 42.682 15.772 1.00 6.80 C ATOM 339 CD1 TRP 36 2.339 41.392 14.580 1.00 6.80 C ATOM 340 NE1 TRP 36 2.642 41.980 15.783 1.00 6.80 N ATOM 342 CZ2 TRP 36 1.319 43.202 17.553 1.00 6.80 C ATOM 343 CZ3 TRP 36 -1.054 43.379 16.992 1.00 6.80 C ATOM 344 CH2 TRP 36 0.041 43.629 17.864 1.00 6.80 C ATOM 345 C TRP 36 -0.375 43.022 11.716 1.00 6.80 C ATOM 346 O TRP 36 -0.551 43.174 10.502 1.00 6.80 O ATOM 347 N ILE 37 0.228 43.936 12.472 1.00 7.28 N ATOM 349 CA ILE 37 0.681 45.242 11.964 1.00 7.28 C ATOM 350 CB ILE 37 1.101 46.150 13.136 1.00 7.28 C ATOM 351 CG2 ILE 37 -0.151 46.741 13.810 1.00 7.28 C ATOM 352 CG1 ILE 37 1.987 45.357 14.119 1.00 7.28 C ATOM 353 CD1 ILE 37 3.069 46.180 14.834 1.00 7.28 C ATOM 354 C ILE 37 1.814 45.212 10.906 1.00 7.28 C ATOM 355 O ILE 37 3.011 45.086 11.188 1.00 7.28 O ATOM 356 N SER 38 1.338 45.425 9.682 1.00 6.45 N ATOM 358 CA SER 38 2.040 45.443 8.396 1.00 6.45 C ATOM 359 CB SER 38 1.000 45.371 7.295 1.00 6.45 C ATOM 360 OG SER 38 0.146 46.508 7.358 1.00 6.45 O ATOM 362 C SER 38 2.946 46.664 8.184 1.00 6.45 C ATOM 363 O SER 38 2.709 47.482 7.281 1.00 6.45 O ATOM 364 N SER 39 3.978 46.786 9.023 1.00 7.97 N ATOM 366 CA SER 39 4.842 47.965 9.000 1.00 7.97 C ATOM 367 CB SER 39 5.686 47.950 10.269 1.00 7.97 C ATOM 368 OG SER 39 6.503 46.793 10.304 1.00 7.97 O ATOM 370 C SER 39 5.784 48.237 7.828 1.00 7.97 C ATOM 371 O SER 39 5.842 49.382 7.382 1.00 7.97 O ATOM 372 N PHE 40 6.459 47.225 7.277 1.00 6.40 N ATOM 374 CA PHE 40 7.388 47.483 6.165 1.00 6.40 C ATOM 375 CB PHE 40 8.848 47.425 6.658 1.00 6.40 C ATOM 376 CG PHE 40 9.171 48.398 7.781 1.00 6.40 C ATOM 377 CD1 PHE 40 9.158 47.971 9.130 1.00 6.40 C ATOM 378 CD2 PHE 40 9.535 49.739 7.502 1.00 6.40 C ATOM 379 CE1 PHE 40 9.503 48.861 10.186 1.00 6.40 C ATOM 380 CE2 PHE 40 9.883 50.640 8.547 1.00 6.40 C ATOM 381 CZ PHE 40 9.866 50.198 9.892 1.00 6.40 C ATOM 382 C PHE 40 7.238 46.804 4.808 1.00 6.40 C ATOM 383 O PHE 40 8.212 46.245 4.283 1.00 6.40 O ATOM 384 N ILE 41 6.030 46.829 4.231 1.00 4.08 N ATOM 386 CA ILE 41 5.827 46.217 2.907 1.00 4.08 C ATOM 387 CB ILE 41 4.705 45.132 2.935 1.00 4.08 C ATOM 388 CG2 ILE 41 4.715 44.276 1.630 1.00 4.08 C ATOM 389 CG1 ILE 41 4.989 44.187 4.101 1.00 4.08 C ATOM 390 CD1 ILE 41 3.744 43.699 4.869 1.00 4.08 C ATOM 391 C ILE 41 5.600 47.333 1.885 1.00 4.08 C ATOM 392 O ILE 41 4.708 47.280 1.034 1.00 4.08 O ATOM 393 N GLY 42 6.491 48.319 1.999 1.00 4.98 N ATOM 395 CA GLY 42 6.595 49.480 1.129 1.00 4.98 C ATOM 396 C GLY 42 5.510 50.186 0.340 1.00 4.98 C ATOM 397 O GLY 42 5.597 51.399 0.158 1.00 4.98 O ATOM 398 N ARG 43 4.478 49.449 -0.071 1.00 4.27 N ATOM 400 CA ARG 43 3.396 49.960 -0.916 1.00 4.27 C ATOM 401 CB ARG 43 2.679 48.802 -1.606 1.00 4.27 C ATOM 402 CG ARG 43 3.571 47.938 -2.470 1.00 4.27 C ATOM 403 CD ARG 43 2.802 46.797 -3.136 1.00 4.27 C ATOM 404 NE ARG 43 1.880 47.261 -4.178 1.00 4.27 N ATOM 406 CZ ARG 43 1.091 46.475 -4.912 1.00 4.27 C ATOM 407 NH1 ARG 43 1.086 45.155 -4.745 1.00 4.27 N ATOM 410 NH2 ARG 43 0.298 47.016 -5.826 1.00 4.27 N ATOM 413 C ARG 43 2.351 50.828 -0.253 1.00 4.27 C ATOM 414 O ARG 43 2.075 50.691 0.942 1.00 4.27 O ATOM 415 N SER 44 1.768 51.722 -1.056 1.00 4.72 N ATOM 417 CA SER 44 0.732 52.623 -0.580 1.00 4.72 C ATOM 418 CB SER 44 0.900 54.008 -1.174 1.00 4.72 C ATOM 419 OG SER 44 2.151 54.512 -0.751 1.00 4.72 O ATOM 421 C SER 44 -0.643 52.010 -0.793 1.00 4.72 C ATOM 422 O SER 44 -1.212 51.994 -1.889 1.00 4.72 O ATOM 423 N LYS 45 -1.049 51.370 0.297 1.00 2.25 N ATOM 425 CA LYS 45 -2.279 50.635 0.499 1.00 2.25 C ATOM 426 CG LYS 45 -2.761 48.140 0.420 1.00 2.25 C ATOM 427 CD LYS 45 -2.455 46.793 1.071 1.00 2.25 C ATOM 428 CE LYS 45 -3.197 45.642 0.394 1.00 2.25 C ATOM 429 NZ LYS 45 -2.713 45.352 -0.989 1.00 2.25 N ATOM 433 C LYS 45 -3.270 51.417 1.335 1.00 2.25 C ATOM 434 O LYS 45 -3.035 51.669 2.527 1.00 2.25 O ATOM 435 CB LYS 45 -2.018 49.265 1.103 1.00 2.25 C TER END