####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS324_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 2 - 22 4.83 12.82 LCS_AVERAGE: 45.09 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 1.33 19.87 LCS_AVERAGE: 16.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.76 19.50 LCS_AVERAGE: 11.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 5 21 3 3 5 6 7 9 10 11 13 14 16 19 20 24 25 27 30 31 36 38 LCS_GDT V 3 V 3 4 5 21 3 3 4 5 6 9 10 11 13 14 15 17 19 21 24 27 30 31 36 38 LCS_GDT Q 4 Q 4 4 5 21 3 3 4 5 6 9 10 11 11 14 15 16 18 19 21 25 27 31 36 38 LCS_GDT G 5 G 5 4 5 21 0 3 4 6 6 9 10 11 12 14 15 17 18 20 21 23 25 28 36 38 LCS_GDT P 6 P 6 4 5 21 3 4 4 6 6 9 10 11 13 14 15 17 18 20 21 23 25 28 31 31 LCS_GDT W 7 W 7 4 5 21 3 4 4 6 6 9 10 12 13 14 16 18 19 22 24 26 27 29 34 38 LCS_GDT V 8 V 8 4 5 21 3 4 5 5 7 8 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT G 9 G 9 6 9 21 3 6 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT S 10 S 10 6 9 21 3 6 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT S 11 S 11 6 9 21 4 6 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT Y 12 Y 12 6 9 21 4 6 7 9 9 9 11 13 13 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT V 13 V 13 6 9 21 4 6 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT A 14 A 14 6 9 21 4 6 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT E 15 E 15 5 9 21 4 4 7 9 9 9 11 13 13 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT T 16 T 16 5 9 21 4 4 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT G 17 G 17 5 9 21 3 4 7 9 9 9 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT Q 18 Q 18 4 6 21 3 4 4 5 6 8 11 13 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT N 19 N 19 4 6 21 3 4 4 5 7 11 11 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT W 20 W 20 7 7 21 3 5 7 8 9 11 12 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT A 21 A 21 7 7 21 3 6 7 8 8 8 10 11 13 16 17 21 21 24 25 27 30 31 36 38 LCS_GDT S 22 S 22 7 7 21 4 6 7 8 8 8 9 11 13 16 17 21 21 24 25 27 30 31 36 38 LCS_GDT L 23 L 23 7 7 20 4 6 7 8 9 11 12 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT A 24 A 24 7 7 20 4 6 7 8 8 8 9 11 14 16 16 19 20 24 25 27 30 31 36 38 LCS_GDT A 25 A 25 7 7 20 4 6 7 8 8 8 9 10 13 13 15 17 19 21 24 26 30 31 36 38 LCS_GDT N 26 N 26 7 8 20 4 6 7 8 9 11 12 14 14 16 16 19 20 21 24 27 30 31 36 38 LCS_GDT E 27 E 27 5 8 20 3 3 6 8 9 11 12 14 14 16 16 17 18 20 22 25 29 31 36 38 LCS_GDT L 28 L 28 5 8 20 3 4 6 8 9 11 12 14 14 16 16 17 18 20 22 25 28 31 36 38 LCS_GDT R 29 R 29 5 8 20 3 4 6 8 9 11 12 14 14 16 16 17 18 20 22 25 28 31 36 38 LCS_GDT V 30 V 30 5 8 20 3 4 6 8 9 11 12 14 14 16 16 17 20 21 24 26 30 31 36 38 LCS_GDT T 31 T 31 5 8 20 3 4 6 8 9 11 12 14 14 16 16 17 20 21 24 26 30 31 36 38 LCS_GDT E 32 E 32 3 8 20 3 4 5 5 9 11 12 14 14 16 16 19 20 22 25 27 30 31 36 38 LCS_GDT R 33 R 33 4 8 20 3 4 6 8 9 11 12 14 14 16 16 19 21 24 25 27 30 31 36 38 LCS_GDT P 34 P 34 4 8 20 3 4 5 7 8 10 12 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT F 35 F 35 4 8 20 3 4 4 6 9 11 12 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT W 36 W 36 4 8 20 3 4 4 7 9 11 12 14 14 16 16 17 19 22 24 26 29 31 36 38 LCS_GDT I 37 I 37 4 8 20 3 4 5 7 8 9 12 14 14 14 15 17 18 20 22 25 29 31 36 38 LCS_GDT S 38 S 38 4 8 20 3 4 5 7 8 9 12 14 14 14 15 17 18 20 22 25 29 31 36 38 LCS_GDT S 39 S 39 4 8 16 3 4 5 7 8 8 12 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT F 40 F 40 4 8 16 3 4 5 7 8 8 12 14 14 14 14 15 16 22 23 25 29 31 34 36 LCS_GDT I 41 I 41 4 7 16 3 3 4 5 6 8 11 14 14 16 18 21 21 24 25 27 30 31 36 38 LCS_GDT G 42 G 42 4 7 16 3 3 5 5 7 9 12 14 14 15 18 21 21 24 25 27 30 31 32 34 LCS_GDT R 43 R 43 4 7 16 3 3 4 5 6 9 12 14 14 14 14 15 15 17 19 22 23 25 25 29 LCS_GDT S 44 S 44 4 7 16 3 3 5 5 7 9 12 14 14 14 14 15 15 15 15 16 18 18 19 19 LCS_GDT K 45 K 45 4 7 16 3 3 5 5 7 9 12 14 14 14 14 15 15 15 15 16 18 18 18 18 LCS_AVERAGE LCS_A: 24.33 ( 11.11 16.79 45.09 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 9 9 11 12 14 14 16 18 21 21 24 25 27 30 31 36 38 GDT PERCENT_AT 9.09 13.64 15.91 20.45 20.45 25.00 27.27 31.82 31.82 36.36 40.91 47.73 47.73 54.55 56.82 61.36 68.18 70.45 81.82 86.36 GDT RMS_LOCAL 0.17 0.56 0.76 1.33 1.33 1.89 2.14 2.54 2.54 3.56 3.83 4.21 4.21 4.97 5.21 5.68 6.22 6.34 7.11 7.37 GDT RMS_ALL_AT 20.33 20.03 19.50 19.87 19.87 16.22 16.49 15.99 15.99 10.69 10.89 10.64 10.64 10.11 9.93 9.65 9.42 9.41 9.66 9.61 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.656 0 0.106 0.149 22.285 0.000 0.000 - LGA V 3 V 3 13.892 0 0.190 0.249 16.376 0.000 0.000 9.865 LGA Q 4 Q 4 14.168 0 0.172 1.089 15.032 0.000 0.000 13.962 LGA G 5 G 5 15.943 0 0.114 0.114 19.772 0.000 0.000 - LGA P 6 P 6 20.284 0 0.623 0.531 22.490 0.000 0.000 22.490 LGA W 7 W 7 22.045 0 0.222 0.301 27.192 0.000 0.000 26.308 LGA V 8 V 8 19.294 0 0.686 0.809 19.842 0.000 0.000 17.219 LGA G 9 G 9 19.559 0 0.528 0.528 19.699 0.000 0.000 - LGA S 10 S 10 21.173 0 0.146 0.755 23.436 0.000 0.000 23.436 LGA S 11 S 11 25.032 0 0.310 0.701 28.088 0.000 0.000 28.088 LGA Y 12 Y 12 22.097 0 0.113 1.416 22.433 0.000 0.000 19.820 LGA V 13 V 13 16.851 0 0.438 1.182 18.564 0.000 0.000 15.915 LGA A 14 A 14 20.025 0 0.246 0.238 22.298 0.000 0.000 - LGA E 15 E 15 22.437 0 0.055 1.570 29.611 0.000 0.000 27.718 LGA T 16 T 16 18.808 0 0.382 0.320 21.104 0.000 0.000 17.373 LGA G 17 G 17 13.109 0 0.148 0.148 15.090 0.000 0.000 - LGA Q 18 Q 18 9.278 0 0.576 1.443 12.752 0.000 0.000 12.523 LGA N 19 N 19 3.795 0 0.426 1.169 5.180 11.818 14.545 3.230 LGA W 20 W 20 2.135 0 0.495 1.124 6.379 21.818 19.481 5.394 LGA A 21 A 21 8.193 0 0.197 0.192 10.975 0.000 0.000 - LGA S 22 S 22 8.137 0 0.161 0.209 9.678 0.000 0.000 8.387 LGA L 23 L 23 1.729 0 0.024 1.419 6.388 40.909 25.455 6.388 LGA A 24 A 24 6.244 0 0.136 0.137 8.596 2.727 2.182 - LGA A 25 A 25 7.569 0 0.479 0.452 9.359 0.000 0.000 - LGA N 26 N 26 1.886 0 0.519 1.239 3.880 56.364 51.591 3.880 LGA E 27 E 27 1.061 0 0.221 0.898 4.613 73.636 42.424 4.613 LGA L 28 L 28 1.328 0 0.540 0.517 3.360 54.091 48.409 1.701 LGA R 29 R 29 1.289 0 0.357 1.367 7.510 54.545 29.587 7.053 LGA V 30 V 30 2.370 0 0.272 1.099 2.904 35.455 31.948 2.808 LGA T 31 T 31 1.818 0 0.743 0.635 4.353 63.182 43.377 3.283 LGA E 32 E 32 3.925 0 0.541 1.070 10.955 20.909 9.293 10.955 LGA R 33 R 33 0.629 0 0.196 1.321 10.815 46.364 21.983 10.815 LGA P 34 P 34 3.832 0 0.170 0.441 6.117 24.545 14.026 6.117 LGA F 35 F 35 3.267 0 0.291 0.306 11.582 11.818 4.298 11.582 LGA W 36 W 36 3.212 0 0.213 1.301 8.098 11.364 14.935 7.670 LGA I 37 I 37 9.032 0 0.448 1.494 13.666 0.000 0.000 13.666 LGA S 38 S 38 11.745 0 0.024 0.093 15.737 0.000 0.000 8.775 LGA S 39 S 39 14.566 0 0.351 0.734 17.386 0.000 0.000 13.286 LGA F 40 F 40 19.308 0 0.520 1.060 23.107 0.000 0.000 19.966 LGA I 41 I 41 21.959 0 0.369 1.102 24.280 0.000 0.000 18.509 LGA G 42 G 42 28.483 0 0.606 0.606 28.804 0.000 0.000 - LGA R 43 R 43 29.574 0 0.313 0.940 34.050 0.000 0.000 33.717 LGA S 44 S 44 29.776 0 0.042 0.644 29.951 0.000 0.000 29.951 LGA K 45 K 45 31.315 0 0.693 0.775 37.256 0.000 0.000 37.256 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.140 9.141 11.348 12.035 8.489 3.636 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.54 31.818 27.522 0.530 LGA_LOCAL RMSD: 2.542 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.990 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.140 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.030081 * X + -0.465203 * Y + -0.884693 * Z + -10.383200 Y_new = 0.985005 * X + 0.136634 * Y + -0.105339 * Z + 63.697258 Z_new = 0.169883 * X + -0.874595 * Y + 0.454118 * Z + 14.821733 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.601326 -0.170711 -1.091882 [DEG: 91.7492 -9.7810 -62.5602 ] ZXZ: -1.452286 1.099415 2.949739 [DEG: -83.2099 62.9918 169.0076 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS324_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.54 27.522 9.14 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS324_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT 4peuA ATOM 12 N ALA 2 -6.720 31.653 1.446 1.00 11.71 N ATOM 14 CA ALA 2 -6.714 32.085 2.843 1.00 11.71 C ATOM 15 CB ALA 2 -7.138 30.926 3.772 1.00 11.71 C ATOM 16 C ALA 2 -5.299 32.540 3.181 1.00 11.71 C ATOM 17 O ALA 2 -4.314 31.824 2.952 1.00 11.71 O ATOM 18 N VAL 3 -5.242 33.772 3.688 1.00 11.09 N ATOM 20 CA VAL 3 -4.048 34.472 4.165 1.00 11.09 C ATOM 21 CB VAL 3 -3.738 35.840 3.482 1.00 11.09 C ATOM 22 CG1 VAL 3 -2.341 36.342 3.920 1.00 11.09 C ATOM 23 CG2 VAL 3 -3.792 35.712 1.961 1.00 11.09 C ATOM 24 C VAL 3 -4.488 34.689 5.597 1.00 11.09 C ATOM 25 O VAL 3 -5.693 34.654 5.886 1.00 11.09 O ATOM 26 N GLN 4 -3.534 34.939 6.481 1.00 9.94 N ATOM 28 CA GLN 4 -3.855 35.092 7.886 1.00 9.94 C ATOM 29 CB GLN 4 -2.735 34.507 8.751 1.00 9.94 C ATOM 30 CG GLN 4 -1.304 34.945 8.412 1.00 9.94 C ATOM 31 CD GLN 4 -0.270 34.320 9.328 1.00 9.94 C ATOM 32 OE1 GLN 4 0.270 33.254 9.035 1.00 9.94 O ATOM 33 NE2 GLN 4 0.011 34.983 10.445 1.00 9.94 N ATOM 36 C GLN 4 -4.170 36.545 8.231 1.00 9.94 C ATOM 37 O GLN 4 -3.333 37.454 8.195 1.00 9.94 O ATOM 38 N GLY 5 -5.480 36.697 8.376 1.00 9.64 N ATOM 40 CA GLY 5 -6.167 37.931 8.653 1.00 9.64 C ATOM 41 C GLY 5 -7.132 37.800 9.807 1.00 9.64 C ATOM 42 O GLY 5 -7.009 36.850 10.590 1.00 9.64 O ATOM 43 N PRO 6 -8.114 38.730 9.936 1.00 9.60 N ATOM 44 CD PRO 6 -8.511 39.680 8.861 1.00 9.60 C ATOM 45 CA PRO 6 -9.115 38.752 11.008 1.00 9.60 C ATOM 46 CB PRO 6 -9.907 40.017 10.701 1.00 9.60 C ATOM 47 CG PRO 6 -9.931 40.040 9.218 1.00 9.60 C ATOM 48 C PRO 6 -10.025 37.530 11.093 1.00 9.60 C ATOM 49 O PRO 6 -9.688 36.456 10.586 1.00 9.60 O ATOM 50 N TRP 7 -11.156 37.706 11.766 1.00 9.87 N ATOM 52 CA TRP 7 -12.083 36.623 11.962 1.00 9.87 C ATOM 53 CB TRP 7 -12.699 36.750 13.359 1.00 9.87 C ATOM 54 CG TRP 7 -11.657 36.749 14.500 1.00 9.87 C ATOM 55 CD2 TRP 7 -11.133 35.605 15.214 1.00 9.87 C ATOM 56 CE2 TRP 7 -10.233 36.104 16.199 1.00 9.87 C ATOM 57 CE3 TRP 7 -11.335 34.209 15.121 1.00 9.87 C ATOM 58 CD1 TRP 7 -11.063 37.852 15.075 1.00 9.87 C ATOM 59 NE1 TRP 7 -10.216 37.469 16.084 1.00 9.87 N ATOM 61 CZ2 TRP 7 -9.529 35.256 17.089 1.00 9.87 C ATOM 62 CZ3 TRP 7 -10.632 33.357 16.011 1.00 9.87 C ATOM 63 CH2 TRP 7 -9.740 33.893 16.981 1.00 9.87 C ATOM 64 C TRP 7 -13.128 36.548 10.857 1.00 9.87 C ATOM 65 O TRP 7 -14.043 37.376 10.740 1.00 9.87 O ATOM 66 N VAL 8 -12.860 35.565 9.995 1.00 8.40 N ATOM 68 CA VAL 8 -13.640 35.190 8.816 1.00 8.40 C ATOM 69 CB VAL 8 -12.749 34.968 7.554 1.00 8.40 C ATOM 70 CG1 VAL 8 -13.610 34.997 6.298 1.00 8.40 C ATOM 71 CG2 VAL 8 -11.658 36.037 7.453 1.00 8.40 C ATOM 72 C VAL 8 -14.322 33.883 9.228 1.00 8.40 C ATOM 73 O VAL 8 -13.901 33.254 10.208 1.00 8.40 O ATOM 74 N GLY 9 -15.400 33.524 8.525 1.00 9.35 N ATOM 76 CA GLY 9 -16.160 32.319 8.820 1.00 9.35 C ATOM 77 C GLY 9 -15.355 31.101 9.204 1.00 9.35 C ATOM 78 O GLY 9 -14.385 30.756 8.523 1.00 9.35 O ATOM 79 N SER 10 -15.829 30.404 10.239 1.00 10.46 N ATOM 81 CA SER 10 -15.105 29.257 10.769 1.00 10.46 C ATOM 82 CB SER 10 -15.082 29.381 12.296 1.00 10.46 C ATOM 83 OG SER 10 -14.373 28.323 12.911 1.00 10.46 O ATOM 85 C SER 10 -15.589 27.863 10.380 1.00 10.46 C ATOM 86 O SER 10 -14.987 26.866 10.811 1.00 10.46 O ATOM 87 N SER 11 -16.609 27.770 9.524 1.00 11.54 N ATOM 89 CA SER 11 -17.065 26.448 9.111 1.00 11.54 C ATOM 90 OG SER 11 -18.188 26.265 11.234 1.00 11.54 O ATOM 92 C SER 11 -17.216 26.242 7.609 1.00 11.54 C ATOM 93 O SER 11 -17.873 25.282 7.185 1.00 11.54 O ATOM 94 CB SER 11 -18.366 26.103 9.839 1.00 11.54 C ATOM 95 N TYR 12 -16.585 27.100 6.795 1.00 10.78 N ATOM 97 CA TYR 12 -16.617 26.869 5.350 1.00 10.78 C ATOM 98 CB TYR 12 -17.202 28.091 4.602 1.00 10.78 C ATOM 99 CG TYR 12 -17.806 27.818 3.216 1.00 10.78 C ATOM 100 CD1 TYR 12 -17.017 27.909 2.042 1.00 10.78 C ATOM 101 CE1 TYR 12 -17.581 27.692 0.754 1.00 10.78 C ATOM 102 CD2 TYR 12 -19.181 27.501 3.065 1.00 10.78 C ATOM 103 CE2 TYR 12 -19.751 27.282 1.780 1.00 10.78 C ATOM 104 CZ TYR 12 -18.945 27.379 0.635 1.00 10.78 C ATOM 105 OH TYR 12 -19.496 27.168 -0.608 1.00 10.78 O ATOM 107 C TYR 12 -15.172 26.639 4.944 1.00 10.78 C ATOM 108 O TYR 12 -14.895 26.224 3.807 1.00 10.78 O ATOM 109 N VAL 13 -14.261 26.852 5.906 1.00 10.21 N ATOM 111 CA VAL 13 -12.853 26.577 5.665 1.00 10.21 C ATOM 112 CB VAL 13 -12.022 27.930 5.509 1.00 10.21 C ATOM 113 CG1 VAL 13 -12.238 28.513 4.133 1.00 10.21 C ATOM 114 CG2 VAL 13 -12.402 28.973 6.586 1.00 10.21 C ATOM 115 C VAL 13 -12.300 25.678 6.789 1.00 10.21 C ATOM 116 O VAL 13 -11.198 25.933 7.306 1.00 10.21 O ATOM 117 N ALA 14 -12.979 24.554 7.071 1.00 11.11 N ATOM 119 CA ALA 14 -12.417 23.621 8.049 1.00 11.11 C ATOM 120 CB ALA 14 -13.509 23.180 9.029 1.00 11.11 C ATOM 121 C ALA 14 -11.972 22.447 7.175 1.00 11.11 C ATOM 122 O ALA 14 -11.567 21.388 7.673 1.00 11.11 O ATOM 123 N GLU 15 -12.004 22.703 5.861 1.00 12.31 N ATOM 125 CA GLU 15 -11.587 21.770 4.817 1.00 12.31 C ATOM 126 CB GLU 15 -12.812 21.265 4.001 1.00 12.31 C ATOM 127 CG GLU 15 -13.814 22.307 3.432 1.00 12.31 C ATOM 128 CD GLU 15 -15.013 22.561 4.343 1.00 12.31 C ATOM 129 OE1 GLU 15 -14.948 23.499 5.165 1.00 12.31 O ATOM 130 OE2 GLU 15 -16.014 21.822 4.229 1.00 12.31 O ATOM 131 C GLU 15 -10.470 22.257 3.889 1.00 12.31 C ATOM 132 O GLU 15 -9.683 21.457 3.380 1.00 12.31 O ATOM 133 N THR 16 -10.405 23.586 3.724 1.00 13.37 N ATOM 135 CA THR 16 -9.480 24.263 2.797 1.00 13.37 C ATOM 136 CB THR 16 -10.273 25.133 1.780 1.00 13.37 C ATOM 137 OG1 THR 16 -11.060 26.106 2.480 1.00 13.37 O ATOM 139 CG2 THR 16 -11.192 24.263 0.950 1.00 13.37 C ATOM 140 C THR 16 -8.376 25.093 3.426 1.00 13.37 C ATOM 141 O THR 16 -8.289 26.310 3.205 1.00 13.37 O ATOM 142 N GLY 17 -7.445 24.423 4.094 1.00 12.43 N ATOM 144 CA GLY 17 -6.411 25.183 4.748 1.00 12.43 C ATOM 145 C GLY 17 -6.604 25.046 6.234 1.00 12.43 C ATOM 146 O GLY 17 -6.255 25.977 6.966 1.00 12.43 O ATOM 147 N GLN 18 -7.155 23.902 6.675 1.00 12.40 N ATOM 149 CA GLN 18 -7.466 23.673 8.093 1.00 12.40 C ATOM 150 CB GLN 18 -8.188 22.312 8.243 1.00 12.40 C ATOM 151 CG GLN 18 -7.375 21.057 7.835 1.00 12.40 C ATOM 152 CD GLN 18 -8.159 19.771 8.011 1.00 12.40 C ATOM 153 OE1 GLN 18 -8.881 19.342 7.110 1.00 12.40 O ATOM 154 NE2 GLN 18 -8.023 19.147 9.177 1.00 12.40 N ATOM 157 C GLN 18 -6.211 23.652 8.968 1.00 12.40 C ATOM 158 O GLN 18 -6.232 23.171 10.113 1.00 12.40 O ATOM 159 N ASN 19 -5.163 24.306 8.456 1.00 13.81 N ATOM 161 CA ASN 19 -3.951 24.508 9.209 1.00 13.81 C ATOM 162 CB ASN 19 -2.770 23.872 8.467 1.00 13.81 C ATOM 163 CG ASN 19 -3.025 22.413 8.111 1.00 13.81 C ATOM 164 OD1 ASN 19 -2.703 21.506 8.883 1.00 13.81 O ATOM 165 ND2 ASN 19 -3.587 22.178 6.927 1.00 13.81 N ATOM 168 C ASN 19 -3.901 26.037 9.188 1.00 13.81 C ATOM 169 O ASN 19 -2.884 26.656 8.856 1.00 13.81 O ATOM 170 N TRP 20 -5.054 26.630 9.522 1.00 12.49 N ATOM 172 CA TRP 20 -5.185 28.071 9.695 1.00 12.49 C ATOM 173 CB TRP 20 -6.230 28.616 8.705 1.00 12.49 C ATOM 174 CG TRP 20 -6.172 30.121 8.364 1.00 12.49 C ATOM 175 CD2 TRP 20 -7.213 31.096 8.587 1.00 12.49 C ATOM 176 CE2 TRP 20 -6.751 32.332 8.050 1.00 12.49 C ATOM 177 CE3 TRP 20 -8.495 31.050 9.182 1.00 12.49 C ATOM 178 CD1 TRP 20 -5.154 30.798 7.723 1.00 12.49 C ATOM 179 NE1 TRP 20 -5.500 32.114 7.535 1.00 12.49 N ATOM 181 CZ2 TRP 20 -7.527 33.517 8.090 1.00 12.49 C ATOM 182 CZ3 TRP 20 -9.273 32.234 9.223 1.00 12.49 C ATOM 183 CH2 TRP 20 -8.778 33.450 8.676 1.00 12.49 C ATOM 184 C TRP 20 -5.692 28.012 11.138 1.00 12.49 C ATOM 185 O TRP 20 -6.209 28.986 11.680 1.00 12.49 O ATOM 186 N ALA 21 -5.282 26.926 11.805 1.00 12.22 N ATOM 188 CA ALA 21 -5.606 26.655 13.200 1.00 12.22 C ATOM 189 CB ALA 21 -5.952 25.193 13.392 1.00 12.22 C ATOM 190 C ALA 21 -4.273 26.985 13.840 1.00 12.22 C ATOM 191 O ALA 21 -4.085 26.825 15.050 1.00 12.22 O ATOM 192 N SER 22 -3.388 27.532 12.989 1.00 13.14 N ATOM 194 CA SER 22 -2.064 27.983 13.387 1.00 13.14 C ATOM 195 CB SER 22 -1.061 27.709 12.251 1.00 13.14 C ATOM 196 OG SER 22 -1.314 28.495 11.097 1.00 13.14 O ATOM 198 C SER 22 -2.242 29.494 13.617 1.00 13.14 C ATOM 199 O SER 22 -1.332 30.148 14.125 1.00 13.14 O ATOM 200 N LEU 23 -3.477 29.982 13.389 1.00 12.70 N ATOM 202 CA LEU 23 -3.851 31.393 13.602 1.00 12.70 C ATOM 203 CB LEU 23 -4.749 31.890 12.448 1.00 12.70 C ATOM 204 CG LEU 23 -5.473 33.258 12.447 1.00 12.70 C ATOM 205 CD1 LEU 23 -4.600 34.407 11.918 1.00 12.70 C ATOM 206 CD2 LEU 23 -6.718 33.136 11.594 1.00 12.70 C ATOM 207 C LEU 23 -4.583 31.538 14.949 1.00 12.70 C ATOM 208 O LEU 23 -4.376 32.520 15.664 1.00 12.70 O ATOM 209 N ALA 24 -5.227 30.450 15.386 1.00 12.28 N ATOM 211 CA ALA 24 -5.984 30.417 16.650 1.00 12.28 C ATOM 212 CB ALA 24 -6.862 29.212 16.688 1.00 12.28 C ATOM 213 C ALA 24 -4.944 30.364 17.767 1.00 12.28 C ATOM 214 O ALA 24 -5.250 30.557 18.945 1.00 12.28 O ATOM 215 N ALA 25 -3.705 30.130 17.319 1.00 13.17 N ATOM 217 CA ALA 25 -2.474 30.077 18.098 1.00 13.17 C ATOM 218 CB ALA 25 -1.592 29.023 17.529 1.00 13.17 C ATOM 219 C ALA 25 -1.911 31.476 17.820 1.00 13.17 C ATOM 220 O ALA 25 -0.769 31.651 17.358 1.00 13.17 O ATOM 221 N ASN 26 -2.655 32.449 18.340 1.00 13.15 N ATOM 223 CA ASN 26 -2.410 33.879 18.137 1.00 13.15 C ATOM 224 CB ASN 26 -3.686 34.666 18.523 1.00 13.15 C ATOM 225 CG ASN 26 -4.388 34.112 19.770 1.00 13.15 C ATOM 226 OD1 ASN 26 -4.095 34.521 20.896 1.00 13.15 O ATOM 227 ND2 ASN 26 -5.326 33.192 19.565 1.00 13.15 N ATOM 230 C ASN 26 -1.141 34.400 18.843 1.00 13.15 C ATOM 231 O ASN 26 -1.202 35.082 19.871 1.00 13.15 O ATOM 232 N GLU 27 0.003 34.018 18.252 1.00 13.51 N ATOM 234 CA GLU 27 1.351 34.370 18.721 1.00 13.51 C ATOM 235 CG GLU 27 2.764 32.408 19.514 1.00 13.51 C ATOM 236 CD GLU 27 3.735 31.312 19.113 1.00 13.51 C ATOM 237 OE1 GLU 27 3.275 30.200 18.778 1.00 13.51 O ATOM 238 OE2 GLU 27 4.960 31.561 19.139 1.00 13.51 O ATOM 239 C GLU 27 1.862 35.715 18.181 1.00 13.51 C ATOM 240 O GLU 27 3.065 36.004 18.229 1.00 13.51 O ATOM 241 CB GLU 27 2.328 33.260 18.341 1.00 13.51 C ATOM 242 N LEU 28 0.929 36.517 17.661 1.00 13.34 N ATOM 244 CA LEU 28 1.190 37.872 17.161 1.00 13.34 C ATOM 245 CB LEU 28 0.884 38.003 15.659 1.00 13.34 C ATOM 246 CG LEU 28 1.861 37.431 14.621 1.00 13.34 C ATOM 247 CD1 LEU 28 1.090 36.610 13.591 1.00 13.34 C ATOM 248 CD2 LEU 28 2.663 38.542 13.923 1.00 13.34 C ATOM 249 C LEU 28 0.274 38.745 18.020 1.00 13.34 C ATOM 250 O LEU 28 -0.957 38.676 17.882 1.00 13.34 O ATOM 251 N ARG 29 0.863 39.558 18.907 1.00 12.74 N ATOM 253 CA ARG 29 0.056 40.384 19.808 1.00 12.74 C ATOM 254 CB ARG 29 0.664 40.383 21.216 1.00 12.74 C ATOM 255 CG ARG 29 -0.348 40.498 22.365 1.00 12.74 C ATOM 256 CD ARG 29 0.329 40.487 23.735 1.00 12.74 C ATOM 257 NE ARG 29 1.100 41.706 24.000 1.00 12.74 N ATOM 259 CZ ARG 29 1.766 41.965 25.126 1.00 12.74 C ATOM 260 NH1 ARG 29 2.430 43.107 25.245 1.00 12.74 N ATOM 263 NH2 ARG 29 1.777 41.098 26.135 1.00 12.74 N ATOM 266 C ARG 29 -0.122 41.809 19.280 1.00 12.74 C ATOM 267 O ARG 29 0.771 42.661 19.319 1.00 12.74 O ATOM 268 N VAL 30 -1.280 41.931 18.636 1.00 13.04 N ATOM 270 CA VAL 30 -1.877 43.107 18.007 1.00 13.04 C ATOM 271 CB VAL 30 -1.731 43.104 16.433 1.00 13.04 C ATOM 272 CG1 VAL 30 -0.304 43.452 16.060 1.00 13.04 C ATOM 273 CG2 VAL 30 -2.106 41.736 15.811 1.00 13.04 C ATOM 274 C VAL 30 -3.336 43.008 18.478 1.00 13.04 C ATOM 275 O VAL 30 -3.694 42.015 19.119 1.00 13.04 O ATOM 276 N THR 31 -4.165 44.022 18.222 1.00 15.09 N ATOM 278 CA THR 31 -5.583 43.938 18.605 1.00 15.09 C ATOM 279 CB THR 31 -6.225 45.339 18.744 1.00 15.09 C ATOM 280 OG1 THR 31 -5.971 46.116 17.565 1.00 15.09 O ATOM 282 CG2 THR 31 -5.643 46.054 19.952 1.00 15.09 C ATOM 283 C THR 31 -6.079 43.141 17.377 1.00 15.09 C ATOM 284 O THR 31 -5.654 43.422 16.245 1.00 15.09 O ATOM 285 N GLU 32 -6.974 42.171 17.607 1.00 13.78 N ATOM 287 CA GLU 32 -7.383 41.205 16.566 1.00 13.78 C ATOM 288 CB GLU 32 -8.037 39.977 17.240 1.00 13.78 C ATOM 289 CG GLU 32 -9.160 40.279 18.252 1.00 13.78 C ATOM 290 CD GLU 32 -9.705 39.032 18.924 1.00 13.78 C ATOM 291 OE1 GLU 32 -9.089 38.562 19.905 1.00 13.78 O ATOM 292 OE2 GLU 32 -10.757 38.527 18.479 1.00 13.78 O ATOM 293 C GLU 32 -8.176 41.626 15.317 1.00 13.78 C ATOM 294 O GLU 32 -9.024 40.875 14.809 1.00 13.78 O ATOM 295 N ARG 33 -7.872 42.834 14.833 1.00 12.62 N ATOM 297 CA ARG 33 -8.412 43.360 13.581 1.00 12.62 C ATOM 298 CB ARG 33 -9.422 44.499 13.830 1.00 12.62 C ATOM 299 CG ARG 33 -10.622 44.088 14.699 1.00 12.62 C ATOM 300 CD ARG 33 -11.838 44.989 14.505 1.00 12.62 C ATOM 301 NE ARG 33 -12.517 44.751 13.227 1.00 12.62 N ATOM 303 CZ ARG 33 -13.832 44.591 13.073 1.00 12.62 C ATOM 304 NH1 ARG 33 -14.658 44.637 14.115 1.00 12.62 N ATOM 307 NH2 ARG 33 -14.328 44.384 11.861 1.00 12.62 N ATOM 310 C ARG 33 -7.140 43.826 12.821 1.00 12.62 C ATOM 311 O ARG 33 -6.781 45.011 12.895 1.00 12.62 O ATOM 312 N PRO 34 -6.485 42.928 12.019 1.00 9.98 N ATOM 313 CD PRO 34 -6.653 41.460 11.982 1.00 9.98 C ATOM 314 CA PRO 34 -5.264 43.298 11.265 1.00 9.98 C ATOM 315 CB PRO 34 -4.817 41.959 10.652 1.00 9.98 C ATOM 316 CG PRO 34 -6.046 41.111 10.670 1.00 9.98 C ATOM 317 C PRO 34 -5.530 44.351 10.178 1.00 9.98 C ATOM 318 O PRO 34 -6.374 44.115 9.302 1.00 9.98 O ATOM 319 N PHE 35 -4.859 45.510 10.248 1.00 9.99 N ATOM 321 CA PHE 35 -5.138 46.522 9.237 1.00 9.99 C ATOM 322 CB PHE 35 -5.751 47.793 9.909 1.00 9.99 C ATOM 323 CG PHE 35 -4.938 48.364 11.070 1.00 9.99 C ATOM 324 CD1 PHE 35 -5.092 47.860 12.385 1.00 9.99 C ATOM 325 CD2 PHE 35 -4.035 49.435 10.862 1.00 9.99 C ATOM 326 CE1 PHE 35 -4.360 48.408 13.474 1.00 9.99 C ATOM 327 CE2 PHE 35 -3.297 49.993 11.941 1.00 9.99 C ATOM 328 CZ PHE 35 -3.460 49.478 13.250 1.00 9.99 C ATOM 329 C PHE 35 -4.117 46.951 8.176 1.00 9.99 C ATOM 330 O PHE 35 -3.201 47.744 8.432 1.00 9.99 O ATOM 331 N TRP 36 -4.191 46.213 7.062 1.00 8.60 N ATOM 333 CA TRP 36 -3.528 46.469 5.773 1.00 8.60 C ATOM 334 CB TRP 36 -2.263 45.581 5.596 1.00 8.60 C ATOM 335 CG TRP 36 -2.105 44.367 6.560 1.00 8.60 C ATOM 336 CD2 TRP 36 -2.459 42.989 6.306 1.00 8.60 C ATOM 337 CE2 TRP 36 -2.095 42.244 7.464 1.00 8.60 C ATOM 338 CE3 TRP 36 -3.048 42.308 5.215 1.00 8.60 C ATOM 339 CD1 TRP 36 -1.559 44.387 7.825 1.00 8.60 C ATOM 340 NE1 TRP 36 -1.552 43.124 8.364 1.00 8.60 N ATOM 342 CZ2 TRP 36 -2.299 40.846 7.567 1.00 8.60 C ATOM 343 CZ3 TRP 36 -3.253 40.909 5.316 1.00 8.60 C ATOM 344 CH2 TRP 36 -2.876 40.199 6.490 1.00 8.60 C ATOM 345 C TRP 36 -4.750 45.956 4.975 1.00 8.60 C ATOM 346 O TRP 36 -4.742 44.800 4.553 1.00 8.60 O ATOM 347 N ILE 37 -5.725 46.812 4.653 1.00 7.78 N ATOM 349 CA ILE 37 -6.967 46.308 4.026 1.00 7.78 C ATOM 350 CB ILE 37 -8.185 46.449 4.997 1.00 7.78 C ATOM 351 CG2 ILE 37 -8.148 45.289 6.017 1.00 7.78 C ATOM 352 CG1 ILE 37 -8.236 47.864 5.625 1.00 7.78 C ATOM 353 CD1 ILE 37 -9.408 48.150 6.589 1.00 7.78 C ATOM 354 C ILE 37 -7.405 46.573 2.578 1.00 7.78 C ATOM 355 O ILE 37 -8.382 47.290 2.334 1.00 7.78 O ATOM 356 N SER 38 -6.727 45.911 1.640 1.00 7.80 N ATOM 358 CA SER 38 -6.992 46.014 0.198 1.00 7.80 C ATOM 359 CB SER 38 -5.656 46.098 -0.513 1.00 7.80 C ATOM 360 OG SER 38 -4.793 45.078 -0.039 1.00 7.80 O ATOM 362 C SER 38 -7.765 44.808 -0.343 1.00 7.80 C ATOM 363 O SER 38 -8.420 44.881 -1.379 1.00 7.80 O ATOM 364 N SER 39 -7.714 43.723 0.424 1.00 5.91 N ATOM 366 CA SER 39 -8.332 42.430 0.134 1.00 5.91 C ATOM 367 CB SER 39 -7.496 41.294 0.670 1.00 5.91 C ATOM 368 OG SER 39 -6.400 41.114 -0.208 1.00 5.91 O ATOM 370 C SER 39 -9.824 42.287 0.394 1.00 5.91 C ATOM 371 O SER 39 -10.260 41.464 1.200 1.00 5.91 O ATOM 372 N PHE 40 -10.600 43.080 -0.347 1.00 5.81 N ATOM 374 CA PHE 40 -12.064 43.183 -0.220 1.00 5.81 C ATOM 375 CB PHE 40 -12.588 44.207 -1.240 1.00 5.81 C ATOM 376 CG PHE 40 -11.752 44.326 -2.510 1.00 5.81 C ATOM 377 CD1 PHE 40 -10.990 45.491 -2.749 1.00 5.81 C ATOM 378 CD2 PHE 40 -11.761 43.312 -3.503 1.00 5.81 C ATOM 379 CE1 PHE 40 -10.246 45.651 -3.952 1.00 5.81 C ATOM 380 CE2 PHE 40 -11.023 43.457 -4.709 1.00 5.81 C ATOM 381 CZ PHE 40 -10.263 44.630 -4.934 1.00 5.81 C ATOM 382 C PHE 40 -12.787 41.849 -0.432 1.00 5.81 C ATOM 383 O PHE 40 -13.256 41.490 -1.517 1.00 5.81 O ATOM 384 N ILE 41 -12.736 41.094 0.663 1.00 3.43 N ATOM 386 CA ILE 41 -13.311 39.761 0.827 1.00 3.43 C ATOM 387 CB ILE 41 -12.405 38.915 1.782 1.00 3.43 C ATOM 388 CG2 ILE 41 -11.185 38.391 1.006 1.00 3.43 C ATOM 389 CG1 ILE 41 -12.002 39.741 3.028 1.00 3.43 C ATOM 390 CD1 ILE 41 -11.847 38.933 4.325 1.00 3.43 C ATOM 391 C ILE 41 -14.718 39.864 1.410 1.00 3.43 C ATOM 392 O ILE 41 -15.056 39.171 2.371 1.00 3.43 O ATOM 393 N GLY 42 -15.572 40.665 0.787 1.00 3.63 N ATOM 395 CA GLY 42 -16.875 40.803 1.382 1.00 3.63 C ATOM 396 C GLY 42 -17.173 42.228 1.717 1.00 3.63 C ATOM 397 O GLY 42 -16.423 42.840 2.488 1.00 3.63 O ATOM 398 N ARG 43 -18.236 42.759 1.112 1.00 4.96 N ATOM 400 CA ARG 43 -18.669 44.135 1.318 1.00 4.96 C ATOM 401 CB ARG 43 -19.758 44.502 0.307 1.00 4.96 C ATOM 402 CG ARG 43 -19.258 44.598 -1.129 1.00 4.96 C ATOM 403 CD ARG 43 -20.371 44.966 -2.107 1.00 4.96 C ATOM 404 NE ARG 43 -20.837 46.347 -1.949 1.00 4.96 N ATOM 406 CZ ARG 43 -21.791 46.925 -2.680 1.00 4.96 C ATOM 407 NH1 ARG 43 -22.416 46.259 -3.647 1.00 4.96 N ATOM 410 NH2 ARG 43 -22.125 48.186 -2.439 1.00 4.96 N ATOM 413 C ARG 43 -19.202 44.160 2.753 1.00 4.96 C ATOM 414 O ARG 43 -20.408 44.129 3.022 1.00 4.96 O ATOM 415 N SER 44 -18.216 44.181 3.660 1.00 2.66 N ATOM 417 CA SER 44 -18.386 44.198 5.111 1.00 2.66 C ATOM 418 CB SER 44 -17.177 43.580 5.801 1.00 2.66 C ATOM 419 OG SER 44 -17.298 43.653 7.203 1.00 2.66 O ATOM 421 C SER 44 -18.483 45.662 5.437 1.00 2.66 C ATOM 422 O SER 44 -17.757 46.490 4.869 1.00 2.66 O ATOM 423 N LYS 45 -19.404 45.986 6.336 1.00 3.20 N ATOM 425 CA LYS 45 -19.623 47.379 6.625 1.00 3.20 C ATOM 426 CG LYS 45 -21.637 47.284 5.017 1.00 3.20 C ATOM 427 CD LYS 45 -23.115 47.610 4.873 1.00 3.20 C ATOM 428 CE LYS 45 -23.633 47.228 3.496 1.00 3.20 C ATOM 429 NZ LYS 45 -25.080 47.543 3.341 1.00 3.20 N ATOM 433 C LYS 45 -19.157 47.929 7.972 1.00 3.20 C ATOM 434 O LYS 45 -19.341 49.120 8.227 1.00 3.20 O ATOM 435 CB LYS 45 -21.114 47.673 6.402 1.00 3.20 C TER END