####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS324_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 5 - 24 4.82 12.29 LONGEST_CONTINUOUS_SEGMENT: 20 6 - 25 5.00 11.36 LCS_AVERAGE: 40.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 9 - 18 1.75 18.53 LONGEST_CONTINUOUS_SEGMENT: 10 11 - 20 1.98 14.39 LCS_AVERAGE: 17.61 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 9 - 14 0.85 21.27 LONGEST_CONTINUOUS_SEGMENT: 6 14 - 19 0.94 14.23 LONGEST_CONTINUOUS_SEGMENT: 6 15 - 20 0.92 14.60 LONGEST_CONTINUOUS_SEGMENT: 6 23 - 28 0.98 11.20 LCS_AVERAGE: 11.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 32 35 36 LCS_GDT V 3 V 3 4 6 9 3 4 4 8 11 13 16 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT Q 4 Q 4 4 6 19 3 4 4 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT G 5 G 5 4 6 20 0 4 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT P 6 P 6 4 6 20 3 4 5 8 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT W 7 W 7 4 6 20 3 4 5 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT V 8 V 8 4 5 20 3 4 5 8 10 12 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT G 9 G 9 6 10 20 3 5 6 9 9 11 12 15 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT S 10 S 10 6 10 20 3 5 6 9 9 11 11 14 15 17 21 23 27 28 30 30 31 33 35 36 LCS_GDT S 11 S 11 6 10 20 3 5 6 9 9 11 11 12 15 17 21 23 24 25 25 28 28 32 35 36 LCS_GDT Y 12 Y 12 6 10 20 3 5 6 9 9 10 11 12 14 16 19 23 24 25 25 28 29 33 35 36 LCS_GDT V 13 V 13 6 10 20 3 5 6 9 9 11 11 14 15 17 21 25 27 28 30 30 31 33 35 36 LCS_GDT A 14 A 14 6 10 20 3 5 6 9 9 11 11 12 15 17 21 23 24 25 26 29 31 33 35 36 LCS_GDT E 15 E 15 6 10 20 3 5 6 9 9 11 11 12 14 16 19 23 24 25 25 28 28 31 34 36 LCS_GDT T 16 T 16 6 10 20 3 5 6 9 9 11 11 12 14 17 21 23 24 25 26 29 31 33 35 36 LCS_GDT G 17 G 17 6 10 20 3 5 6 9 9 11 11 12 15 17 21 23 27 28 30 30 31 33 35 36 LCS_GDT Q 18 Q 18 6 10 20 3 5 6 8 9 11 12 15 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT N 19 N 19 6 10 20 3 5 6 8 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT W 20 W 20 6 10 20 3 5 8 10 12 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT A 21 A 21 4 8 20 3 4 5 5 8 10 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT S 22 S 22 4 4 20 4 4 5 5 8 10 13 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT L 23 L 23 6 6 20 4 4 6 7 11 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT A 24 A 24 6 6 20 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT A 25 A 25 6 6 20 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT N 26 N 26 6 6 19 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT E 27 E 27 6 6 17 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT L 28 L 28 6 8 17 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT R 29 R 29 4 8 17 3 5 5 6 7 10 12 14 15 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT V 30 V 30 4 8 17 3 4 5 7 7 9 11 14 15 17 21 23 24 27 30 30 31 33 35 36 LCS_GDT T 31 T 31 4 8 17 3 4 5 7 7 9 11 13 14 16 19 23 24 25 25 26 28 31 32 36 LCS_GDT E 32 E 32 4 8 17 3 4 5 6 8 9 10 13 14 14 16 16 17 20 22 25 25 25 27 28 LCS_GDT R 33 R 33 4 8 17 3 4 4 7 8 9 10 13 14 14 15 16 16 18 18 20 21 25 26 28 LCS_GDT P 34 P 34 4 8 17 3 5 5 7 8 9 10 13 14 14 15 16 16 16 20 22 24 26 30 30 LCS_GDT F 35 F 35 4 8 17 3 5 5 7 8 9 10 12 12 14 16 23 24 26 28 29 31 33 35 36 LCS_GDT W 36 W 36 4 8 16 3 5 5 7 8 9 10 12 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT I 37 I 37 4 8 16 3 5 5 8 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT S 38 S 38 4 8 16 3 3 4 6 8 9 12 15 18 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT S 39 S 39 4 8 16 3 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 LCS_GDT F 40 F 40 4 7 16 3 4 4 6 8 9 10 12 17 18 18 19 25 27 30 30 31 33 35 36 LCS_GDT I 41 I 41 5 7 16 4 4 4 6 7 8 9 12 17 18 24 25 27 28 30 30 31 33 35 36 LCS_GDT G 42 G 42 5 7 16 4 4 4 6 8 9 10 12 12 13 14 18 22 24 26 28 29 30 33 36 LCS_GDT R 43 R 43 5 7 16 4 4 4 6 8 8 10 10 12 12 14 14 14 15 21 22 24 26 29 31 LCS_GDT S 44 S 44 5 7 16 4 4 4 6 8 8 9 10 12 12 14 14 14 15 15 17 19 19 20 20 LCS_GDT K 45 K 45 5 7 16 0 3 4 6 7 7 9 10 12 12 14 14 14 15 15 17 19 19 20 20 LCS_AVERAGE LCS_A: 23.19 ( 11.21 17.61 40.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 8 10 13 15 17 19 19 22 24 25 27 28 30 30 31 33 35 36 GDT PERCENT_AT 9.09 15.91 18.18 22.73 29.55 34.09 38.64 43.18 43.18 50.00 54.55 56.82 61.36 63.64 68.18 68.18 70.45 75.00 79.55 81.82 GDT RMS_LOCAL 0.31 0.76 0.87 1.16 1.79 2.03 2.38 2.64 2.64 3.29 3.61 3.75 4.36 4.58 4.87 4.87 5.39 5.84 6.06 6.29 GDT RMS_ALL_AT 15.89 10.84 10.90 10.97 10.76 10.69 10.55 10.57 10.57 10.38 10.28 10.24 9.98 9.91 9.82 9.82 9.71 9.54 9.55 9.45 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.295 0 0.107 0.161 2.944 48.636 46.545 - LGA V 3 V 3 3.405 0 0.097 0.136 6.896 36.364 20.779 6.896 LGA Q 4 Q 4 1.953 0 0.172 0.910 8.610 30.455 15.354 8.610 LGA G 5 G 5 2.316 0 0.075 0.075 4.500 30.455 30.455 - LGA P 6 P 6 2.547 0 0.516 0.504 4.135 49.545 35.584 4.135 LGA W 7 W 7 2.242 0 0.184 1.218 7.035 25.909 10.779 5.474 LGA V 8 V 8 4.327 0 0.584 1.048 7.891 8.182 13.766 3.466 LGA G 9 G 9 6.636 0 0.635 0.635 7.959 0.000 0.000 - LGA S 10 S 10 11.408 0 0.105 0.747 14.300 0.000 0.000 13.699 LGA S 11 S 11 15.898 0 0.298 0.700 18.688 0.000 0.000 18.688 LGA Y 12 Y 12 14.988 0 0.137 0.892 16.286 0.000 0.000 16.286 LGA V 13 V 13 11.098 0 0.432 0.396 12.751 0.000 0.000 8.212 LGA A 14 A 14 16.405 0 0.280 0.264 19.295 0.000 0.000 - LGA E 15 E 15 18.919 0 0.066 1.387 24.983 0.000 0.000 24.983 LGA T 16 T 16 15.307 0 0.090 0.259 15.902 0.000 0.000 12.080 LGA G 17 G 17 12.288 0 0.050 0.050 13.259 0.000 0.000 - LGA Q 18 Q 18 6.820 0 0.151 1.020 12.877 0.909 0.404 10.587 LGA N 19 N 19 2.557 0 0.552 1.202 5.917 30.455 18.864 5.917 LGA W 20 W 20 2.562 0 0.484 0.326 13.570 45.455 12.987 13.570 LGA A 21 A 21 3.503 0 0.192 0.194 5.294 15.000 12.000 - LGA S 22 S 22 4.515 0 0.653 0.632 6.342 11.364 7.576 6.053 LGA L 23 L 23 3.259 0 0.440 1.253 7.991 30.455 15.227 7.991 LGA A 24 A 24 0.603 0 0.341 0.336 1.503 70.000 69.091 - LGA A 25 A 25 1.539 0 0.261 0.253 2.295 55.455 52.000 - LGA N 26 N 26 1.973 0 0.144 1.117 3.249 50.909 42.273 2.949 LGA E 27 E 27 2.037 0 0.534 1.117 3.140 41.364 43.232 1.170 LGA L 28 L 28 1.806 0 0.399 0.553 5.654 29.545 18.864 5.654 LGA R 29 R 29 7.938 0 0.417 1.035 10.162 0.000 0.000 8.666 LGA V 30 V 30 9.952 0 0.127 0.158 14.007 0.000 0.000 10.171 LGA T 31 T 31 16.575 0 0.668 0.848 18.560 0.000 0.000 17.229 LGA E 32 E 32 19.009 0 0.063 0.998 23.257 0.000 0.000 23.257 LGA R 33 R 33 16.523 0 0.371 1.683 17.976 0.000 0.000 15.225 LGA P 34 P 34 14.231 0 0.327 0.523 18.712 0.000 0.000 17.775 LGA F 35 F 35 8.518 0 0.134 0.643 10.047 0.000 0.000 8.184 LGA W 36 W 36 5.151 0 0.096 1.120 9.048 9.091 2.597 8.905 LGA I 37 I 37 2.860 0 0.460 1.560 8.044 15.000 10.455 8.044 LGA S 38 S 38 6.123 0 0.225 0.581 8.669 4.545 3.030 8.669 LGA S 39 S 39 1.138 0 0.380 0.378 4.712 34.091 26.667 4.138 LGA F 40 F 40 6.843 0 0.518 0.710 10.849 1.364 0.496 10.628 LGA I 41 I 41 6.179 0 0.384 1.178 8.125 0.000 5.682 3.505 LGA G 42 G 42 11.146 0 0.306 0.306 14.800 0.000 0.000 - LGA R 43 R 43 16.084 0 0.070 1.379 19.768 0.000 0.000 19.768 LGA S 44 S 44 22.381 0 0.222 0.205 24.612 0.000 0.000 23.866 LGA K 45 K 45 23.886 0 0.174 0.411 25.502 0.000 0.000 24.121 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.164 9.250 10.191 15.331 11.698 3.792 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.64 37.500 33.730 0.693 LGA_LOCAL RMSD: 2.642 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.570 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.164 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.495041 * X + 0.677302 * Y + 0.544240 * Z + -15.256857 Y_new = -0.812399 * X + 0.582946 * Y + 0.013487 * Z + 60.286884 Z_new = -0.308128 * X + -0.448817 * Y + 0.838821 * Z + 15.210824 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.023525 0.313225 -0.491298 [DEG: -58.6437 17.9464 -28.1493 ] ZXZ: 1.595572 0.575682 -2.539961 [DEG: 91.4196 32.9842 -145.5291 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS324_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS324_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.64 33.730 9.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS324_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 4peuA ATOM 12 N ALA 2 10.938 34.530 15.285 1.00 12.66 N ATOM 14 CA ALA 2 10.266 35.475 14.404 1.00 12.66 C ATOM 15 CB ALA 2 10.130 36.837 15.090 1.00 12.66 C ATOM 16 C ALA 2 11.223 35.580 13.227 1.00 12.66 C ATOM 17 O ALA 2 12.423 35.840 13.404 1.00 12.66 O ATOM 18 N VAL 3 10.682 35.325 12.031 1.00 11.11 N ATOM 20 CA VAL 3 11.430 35.403 10.772 1.00 11.11 C ATOM 21 CB VAL 3 11.510 34.016 10.009 1.00 11.11 C ATOM 22 CG1 VAL 3 12.480 34.103 8.845 1.00 11.11 C ATOM 23 CG2 VAL 3 11.951 32.897 10.954 1.00 11.11 C ATOM 24 C VAL 3 10.675 36.458 9.975 1.00 11.11 C ATOM 25 O VAL 3 9.546 36.223 9.537 1.00 11.11 O ATOM 26 N GLN 4 11.349 37.546 9.631 1.00 10.62 N ATOM 28 CA GLN 4 10.667 38.609 8.923 1.00 10.62 C ATOM 29 CB GLN 4 11.247 39.973 9.307 1.00 10.62 C ATOM 30 CG GLN 4 10.930 40.439 10.708 1.00 10.62 C ATOM 31 CD GLN 4 11.533 41.795 11.023 1.00 10.62 C ATOM 32 OE1 GLN 4 10.902 42.831 10.812 1.00 10.62 O ATOM 33 NE2 GLN 4 12.761 41.795 11.533 1.00 10.62 N ATOM 36 C GLN 4 10.945 38.300 7.470 1.00 10.62 C ATOM 37 O GLN 4 12.050 38.500 6.946 1.00 10.62 O ATOM 38 N GLY 5 9.931 37.663 6.889 1.00 10.60 N ATOM 40 CA GLY 5 9.968 37.289 5.503 1.00 10.60 C ATOM 41 C GLY 5 8.581 37.523 4.978 1.00 10.60 C ATOM 42 O GLY 5 7.614 37.388 5.741 1.00 10.60 O ATOM 43 N PRO 6 8.437 37.862 3.675 1.00 9.51 N ATOM 44 CD PRO 6 9.400 38.592 2.821 1.00 9.51 C ATOM 45 CA PRO 6 7.083 38.083 3.173 1.00 9.51 C ATOM 46 CB PRO 6 7.264 39.236 2.171 1.00 9.51 C ATOM 47 CG PRO 6 8.619 39.822 2.494 1.00 9.51 C ATOM 48 C PRO 6 6.526 36.847 2.488 1.00 9.51 C ATOM 49 O PRO 6 6.714 36.663 1.280 1.00 9.51 O ATOM 50 N TRP 7 5.939 35.945 3.278 1.00 8.86 N ATOM 52 CA TRP 7 5.317 34.793 2.658 1.00 8.86 C ATOM 53 CB TRP 7 5.542 33.552 3.547 1.00 8.86 C ATOM 54 CG TRP 7 5.510 32.195 2.844 1.00 8.86 C ATOM 55 CD2 TRP 7 6.613 31.505 2.208 1.00 8.86 C ATOM 56 CE2 TRP 7 6.108 30.261 1.734 1.00 8.86 C ATOM 57 CE3 TRP 7 7.976 31.816 1.992 1.00 8.86 C ATOM 58 CD1 TRP 7 4.425 31.356 2.726 1.00 8.86 C ATOM 59 NE1 TRP 7 4.780 30.205 2.065 1.00 8.86 N ATOM 61 CZ2 TRP 7 6.917 29.319 1.053 1.00 8.86 C ATOM 62 CZ3 TRP 7 8.788 30.875 1.310 1.00 8.86 C ATOM 63 CH2 TRP 7 8.247 29.641 0.851 1.00 8.86 C ATOM 64 C TRP 7 3.890 35.304 2.763 1.00 8.86 C ATOM 65 O TRP 7 3.142 34.925 3.662 1.00 8.86 O ATOM 66 N VAL 8 3.508 36.129 1.783 1.00 7.87 N ATOM 68 CA VAL 8 2.164 36.688 1.745 1.00 7.87 C ATOM 69 CB VAL 8 1.997 38.120 2.331 1.00 7.87 C ATOM 70 CG1 VAL 8 1.113 38.046 3.573 1.00 7.87 C ATOM 71 CG2 VAL 8 3.343 38.788 2.631 1.00 7.87 C ATOM 72 C VAL 8 1.444 36.641 0.436 1.00 7.87 C ATOM 73 O VAL 8 1.759 37.350 -0.532 1.00 7.87 O ATOM 74 N GLY 9 0.588 35.643 0.404 1.00 9.64 N ATOM 76 CA GLY 9 -0.347 35.428 -0.665 1.00 9.64 C ATOM 77 C GLY 9 -1.526 35.153 0.228 1.00 9.64 C ATOM 78 O GLY 9 -1.339 34.408 1.202 1.00 9.64 O ATOM 79 N SER 10 -2.717 35.671 -0.051 1.00 11.69 N ATOM 81 CA SER 10 -3.786 35.367 0.885 1.00 11.69 C ATOM 82 CB SER 10 -4.348 36.680 1.446 1.00 11.69 C ATOM 83 OG SER 10 -5.178 36.453 2.565 1.00 11.69 O ATOM 85 C SER 10 -4.907 34.504 0.314 1.00 11.69 C ATOM 86 O SER 10 -5.793 34.088 1.069 1.00 11.69 O ATOM 87 N SER 11 -4.826 34.160 -0.980 1.00 13.73 N ATOM 89 CA SER 11 -5.821 33.271 -1.588 1.00 13.73 C ATOM 90 OG SER 11 -7.386 35.089 -1.476 1.00 13.73 O ATOM 92 C SER 11 -5.241 32.191 -2.500 1.00 13.73 C ATOM 93 O SER 11 -5.982 31.556 -3.264 1.00 13.73 O ATOM 94 CB SER 11 -6.856 34.102 -2.340 1.00 13.73 C ATOM 95 N TYR 12 -3.933 31.945 -2.386 1.00 12.50 N ATOM 97 CA TYR 12 -3.282 30.882 -3.156 1.00 12.50 C ATOM 98 CB TYR 12 -2.095 31.435 -3.986 1.00 12.50 C ATOM 99 CG TYR 12 -1.691 30.630 -5.232 1.00 12.50 C ATOM 100 CD1 TYR 12 -2.259 30.912 -6.501 1.00 12.50 C ATOM 101 CE1 TYR 12 -1.862 30.193 -7.663 1.00 12.50 C ATOM 102 CD2 TYR 12 -0.713 29.608 -5.159 1.00 12.50 C ATOM 103 CE2 TYR 12 -0.311 28.885 -6.317 1.00 12.50 C ATOM 104 CZ TYR 12 -0.890 29.186 -7.560 1.00 12.50 C ATOM 105 OH TYR 12 -0.506 28.490 -8.684 1.00 12.50 O ATOM 107 C TYR 12 -2.794 29.932 -2.077 1.00 12.50 C ATOM 108 O TYR 12 -2.294 28.833 -2.384 1.00 12.50 O ATOM 109 N VAL 13 -3.134 30.280 -0.822 1.00 11.64 N ATOM 111 CA VAL 13 -2.708 29.466 0.303 1.00 11.64 C ATOM 112 CB VAL 13 -1.972 30.415 1.337 1.00 11.64 C ATOM 113 CG1 VAL 13 -1.605 29.688 2.614 1.00 11.64 C ATOM 114 CG2 VAL 13 -0.712 31.012 0.708 1.00 11.64 C ATOM 115 C VAL 13 -3.965 28.794 0.903 1.00 11.64 C ATOM 116 O VAL 13 -4.182 28.750 2.128 1.00 11.64 O ATOM 117 N ALA 14 -4.766 28.216 0.002 1.00 13.62 N ATOM 119 CA ALA 14 -5.862 27.347 0.400 1.00 13.62 C ATOM 120 CB ALA 14 -7.146 27.841 -0.232 1.00 13.62 C ATOM 121 C ALA 14 -5.356 26.066 -0.284 1.00 13.62 C ATOM 122 O ALA 14 -6.089 25.079 -0.431 1.00 13.62 O ATOM 123 N GLU 15 -4.064 26.110 -0.640 1.00 12.70 N ATOM 125 CA GLU 15 -3.341 25.043 -1.336 1.00 12.70 C ATOM 126 CB GLU 15 -2.756 25.582 -2.643 1.00 12.70 C ATOM 127 CG GLU 15 -3.801 25.809 -3.725 1.00 12.70 C ATOM 128 CD GLU 15 -3.205 26.343 -5.014 1.00 12.70 C ATOM 129 OE1 GLU 15 -2.825 25.526 -5.879 1.00 12.70 O ATOM 130 OE2 GLU 15 -3.119 27.581 -5.164 1.00 12.70 O ATOM 131 C GLU 15 -2.256 24.364 -0.528 1.00 12.70 C ATOM 132 O GLU 15 -1.928 23.197 -0.769 1.00 12.70 O ATOM 133 N THR 16 -1.722 25.110 0.444 1.00 12.62 N ATOM 135 CA THR 16 -0.662 24.638 1.338 1.00 12.62 C ATOM 136 CB THR 16 0.337 25.761 1.693 1.00 12.62 C ATOM 137 OG1 THR 16 -0.371 26.982 1.932 1.00 12.62 O ATOM 139 CG2 THR 16 1.332 25.946 0.558 1.00 12.62 C ATOM 140 C THR 16 -1.370 24.066 2.556 1.00 12.62 C ATOM 141 O THR 16 -0.825 23.225 3.278 1.00 12.62 O ATOM 142 N GLY 17 -2.609 24.535 2.741 1.00 12.74 N ATOM 144 CA GLY 17 -3.489 24.088 3.809 1.00 12.74 C ATOM 145 C GLY 17 -3.027 24.186 5.240 1.00 12.74 C ATOM 146 O GLY 17 -3.790 23.828 6.145 1.00 12.74 O ATOM 147 N GLN 18 -1.786 24.647 5.437 1.00 14.03 N ATOM 149 CA GLN 18 -1.213 24.847 6.767 1.00 14.03 C ATOM 150 CB GLN 18 0.260 25.250 6.695 1.00 14.03 C ATOM 151 CG GLN 18 1.173 24.167 6.160 1.00 14.03 C ATOM 152 CD GLN 18 2.626 24.601 6.103 1.00 14.03 C ATOM 153 OE1 GLN 18 3.380 24.408 7.056 1.00 14.03 O ATOM 154 NE2 GLN 18 3.024 25.192 4.981 1.00 14.03 N ATOM 157 C GLN 18 -2.106 26.017 7.110 1.00 14.03 C ATOM 158 O GLN 18 -1.908 27.144 6.632 1.00 14.03 O ATOM 159 N ASN 19 -3.110 25.721 7.936 1.00 13.68 N ATOM 161 CA ASN 19 -4.136 26.688 8.266 1.00 13.68 C ATOM 162 CB ASN 19 -5.354 26.003 8.903 1.00 13.68 C ATOM 163 CG ASN 19 -6.175 25.205 7.900 1.00 13.68 C ATOM 164 OD1 ASN 19 -7.067 25.742 7.239 1.00 13.68 O ATOM 165 ND2 ASN 19 -5.894 23.909 7.803 1.00 13.68 N ATOM 168 C ASN 19 -3.598 27.779 9.156 1.00 13.68 C ATOM 169 O ASN 19 -3.667 27.716 10.386 1.00 13.68 O ATOM 170 N TRP 20 -2.963 28.749 8.488 1.00 12.81 N ATOM 172 CA TRP 20 -2.440 29.914 9.177 1.00 12.81 C ATOM 173 CB TRP 20 -1.117 30.389 8.542 1.00 12.81 C ATOM 174 CG TRP 20 0.109 29.453 8.714 1.00 12.81 C ATOM 175 CD2 TRP 20 0.956 29.309 9.878 1.00 12.81 C ATOM 176 CE2 TRP 20 1.970 28.369 9.542 1.00 12.81 C ATOM 177 CE3 TRP 20 0.958 29.880 11.172 1.00 12.81 C ATOM 178 CD1 TRP 20 0.638 28.619 7.762 1.00 12.81 C ATOM 179 NE1 TRP 20 1.747 27.971 8.251 1.00 12.81 N ATOM 181 CZ2 TRP 20 2.985 27.981 10.451 1.00 12.81 C ATOM 182 CZ3 TRP 20 1.972 29.494 12.086 1.00 12.81 C ATOM 183 CH2 TRP 20 2.970 28.551 11.712 1.00 12.81 C ATOM 184 C TRP 20 -3.572 30.961 9.070 1.00 12.81 C ATOM 185 O TRP 20 -3.341 32.174 9.147 1.00 12.81 O ATOM 186 N ALA 21 -4.806 30.423 9.144 1.00 11.96 N ATOM 188 CA ALA 21 -6.075 31.169 9.137 1.00 11.96 C ATOM 189 CB ALA 21 -7.106 30.468 8.337 1.00 11.96 C ATOM 190 C ALA 21 -6.443 31.110 10.606 1.00 11.96 C ATOM 191 O ALA 21 -7.492 31.578 11.040 1.00 11.96 O ATOM 192 N SER 22 -5.478 30.554 11.346 1.00 14.87 N ATOM 194 CA SER 22 -5.405 30.469 12.797 1.00 14.87 C ATOM 195 CB SER 22 -4.542 29.287 13.243 1.00 14.87 C ATOM 196 OG SER 22 -5.062 28.071 12.761 1.00 14.87 O ATOM 198 C SER 22 -4.554 31.710 12.551 1.00 14.87 C ATOM 199 O SER 22 -3.326 31.632 12.400 1.00 14.87 O ATOM 200 N LEU 23 -5.263 32.842 12.452 1.00 13.88 N ATOM 202 CA LEU 23 -4.772 34.171 12.066 1.00 13.88 C ATOM 203 CB LEU 23 -5.905 35.234 12.078 1.00 13.88 C ATOM 204 CG LEU 23 -7.189 35.416 11.216 1.00 13.88 C ATOM 205 CD1 LEU 23 -6.938 35.341 9.698 1.00 13.88 C ATOM 206 CD2 LEU 23 -8.307 34.458 11.638 1.00 13.88 C ATOM 207 C LEU 23 -3.605 34.565 12.952 1.00 13.88 C ATOM 208 O LEU 23 -3.616 35.592 13.621 1.00 13.88 O ATOM 209 N ALA 24 -2.587 33.686 12.896 1.00 12.46 N ATOM 211 CA ALA 24 -1.335 33.671 13.684 1.00 12.46 C ATOM 212 CB ALA 24 -0.413 32.575 13.120 1.00 12.46 C ATOM 213 C ALA 24 -0.599 35.012 13.645 1.00 12.46 C ATOM 214 O ALA 24 0.633 35.097 13.749 1.00 12.46 O ATOM 215 N ALA 25 -1.426 36.050 13.515 1.00 12.82 N ATOM 217 CA ALA 25 -1.047 37.445 13.524 1.00 12.82 C ATOM 218 CB ALA 25 -1.839 38.172 12.471 1.00 12.82 C ATOM 219 C ALA 25 -1.416 37.950 14.933 1.00 12.82 C ATOM 220 O ALA 25 -1.302 39.148 15.199 1.00 12.82 O ATOM 221 N ASN 26 -1.795 37.020 15.836 1.00 14.51 N ATOM 223 CA ASN 26 -2.184 37.369 17.215 1.00 14.51 C ATOM 224 CB ASN 26 -3.545 36.721 17.560 1.00 14.51 C ATOM 225 CG ASN 26 -3.478 35.195 17.688 1.00 14.51 C ATOM 226 OD1 ASN 26 -3.679 34.470 16.712 1.00 14.51 O ATOM 227 ND2 ASN 26 -3.209 34.711 18.897 1.00 14.51 N ATOM 230 C ASN 26 -1.121 36.996 18.270 1.00 14.51 C ATOM 231 O ASN 26 -1.201 37.432 19.418 1.00 14.51 O ATOM 232 N GLU 27 -0.130 36.203 17.849 1.00 13.53 N ATOM 234 CA GLU 27 1.025 35.791 18.667 1.00 13.53 C ATOM 235 CG GLU 27 0.052 33.707 19.814 1.00 13.53 C ATOM 236 CD GLU 27 0.142 32.199 19.966 1.00 13.53 C ATOM 237 OE1 GLU 27 0.885 31.732 20.854 1.00 13.53 O ATOM 238 OE2 GLU 27 -0.535 31.482 19.199 1.00 13.53 O ATOM 239 C GLU 27 2.182 36.333 17.819 1.00 13.53 C ATOM 240 O GLU 27 2.813 35.581 17.061 1.00 13.53 O ATOM 241 CB GLU 27 1.085 34.262 18.846 1.00 13.53 C ATOM 242 N LEU 28 2.567 37.589 18.066 1.00 12.28 N ATOM 244 CA LEU 28 3.568 38.237 17.218 1.00 12.28 C ATOM 245 CB LEU 28 3.316 39.750 17.117 1.00 12.28 C ATOM 246 CG LEU 28 2.368 40.286 16.037 1.00 12.28 C ATOM 247 CD1 LEU 28 1.325 41.198 16.682 1.00 12.28 C ATOM 248 CD2 LEU 28 3.142 41.044 14.949 1.00 12.28 C ATOM 249 C LEU 28 5.053 37.940 17.374 1.00 12.28 C ATOM 250 O LEU 28 5.781 38.532 18.179 1.00 12.28 O ATOM 251 N ARG 29 5.404 36.880 16.641 1.00 11.69 N ATOM 253 CA ARG 29 6.744 36.336 16.422 1.00 11.69 C ATOM 254 CB ARG 29 6.884 34.921 17.005 1.00 11.69 C ATOM 255 CG ARG 29 7.163 34.892 18.504 1.00 11.69 C ATOM 256 CD ARG 29 7.295 33.467 19.041 1.00 11.69 C ATOM 257 NE ARG 29 6.024 32.737 19.041 1.00 11.69 N ATOM 259 CZ ARG 29 5.859 31.481 19.456 1.00 11.69 C ATOM 260 NH1 ARG 29 6.882 30.768 19.920 1.00 11.69 N ATOM 263 NH2 ARG 29 4.654 30.929 19.405 1.00 11.69 N ATOM 266 C ARG 29 6.556 36.347 14.897 1.00 11.69 C ATOM 267 O ARG 29 6.027 35.388 14.324 1.00 11.69 O ATOM 268 N VAL 30 7.185 37.324 14.236 1.00 12.08 N ATOM 270 CA VAL 30 6.978 37.587 12.800 1.00 12.08 C ATOM 271 CB VAL 30 7.262 39.140 12.508 1.00 12.08 C ATOM 272 CG1 VAL 30 7.346 39.461 11.015 1.00 12.08 C ATOM 273 CG2 VAL 30 6.184 40.001 13.160 1.00 12.08 C ATOM 274 C VAL 30 7.829 36.632 11.951 1.00 12.08 C ATOM 275 O VAL 30 8.985 36.904 11.687 1.00 12.08 O ATOM 276 N THR 31 7.197 35.490 11.610 1.00 13.49 N ATOM 278 CA THR 31 7.702 34.334 10.820 1.00 13.49 C ATOM 279 CB THR 31 7.330 32.973 11.505 1.00 13.49 C ATOM 280 OG1 THR 31 7.167 33.175 12.914 1.00 13.49 O ATOM 282 CG2 THR 31 8.438 31.934 11.294 1.00 13.49 C ATOM 283 C THR 31 7.156 34.397 9.370 1.00 13.49 C ATOM 284 O THR 31 6.697 35.465 8.946 1.00 13.49 O ATOM 285 N GLU 32 7.253 33.280 8.618 1.00 13.14 N ATOM 287 CA GLU 32 6.764 33.153 7.219 1.00 13.14 C ATOM 288 CB GLU 32 7.072 31.751 6.658 1.00 13.14 C ATOM 289 CG GLU 32 6.915 30.564 7.636 1.00 13.14 C ATOM 290 CD GLU 32 7.239 29.230 6.992 1.00 13.14 C ATOM 291 OE1 GLU 32 8.417 28.815 7.040 1.00 13.14 O ATOM 292 OE2 GLU 32 6.317 28.595 6.436 1.00 13.14 O ATOM 293 C GLU 32 5.259 33.378 7.402 1.00 13.14 C ATOM 294 O GLU 32 4.645 32.758 8.283 1.00 13.14 O ATOM 295 N ARG 33 4.670 34.232 6.558 1.00 11.91 N ATOM 297 CA ARG 33 3.309 34.682 6.857 1.00 11.91 C ATOM 298 CB ARG 33 3.521 36.186 7.136 1.00 11.91 C ATOM 299 CG ARG 33 4.263 36.961 5.981 1.00 11.91 C ATOM 300 CD ARG 33 4.291 38.465 6.222 1.00 11.91 C ATOM 301 NE ARG 33 2.971 39.078 6.061 1.00 11.91 N ATOM 303 CZ ARG 33 2.750 40.364 5.785 1.00 11.91 C ATOM 304 NH1 ARG 33 1.504 40.801 5.661 1.00 11.91 N ATOM 307 NH2 ARG 33 3.757 41.218 5.631 1.00 11.91 N ATOM 310 C ARG 33 1.901 34.611 6.177 1.00 11.91 C ATOM 311 O ARG 33 1.484 35.603 5.557 1.00 11.91 O ATOM 312 N PRO 34 1.152 33.465 6.252 1.00 11.48 N ATOM 313 CD PRO 34 1.523 32.030 6.149 1.00 11.48 C ATOM 314 CA PRO 34 -0.144 33.741 5.584 1.00 11.48 C ATOM 315 CB PRO 34 -0.369 32.490 4.733 1.00 11.48 C ATOM 316 CG PRO 34 0.328 31.403 5.486 1.00 11.48 C ATOM 317 C PRO 34 -1.219 33.964 6.712 1.00 11.48 C ATOM 318 O PRO 34 -1.922 33.032 7.115 1.00 11.48 O ATOM 319 N PHE 35 -1.293 35.203 7.205 1.00 9.02 N ATOM 321 CA PHE 35 -2.189 35.695 8.282 1.00 9.02 C ATOM 322 CB PHE 35 -1.844 35.257 9.747 1.00 9.02 C ATOM 323 CG PHE 35 -0.401 34.908 9.993 1.00 9.02 C ATOM 324 CD1 PHE 35 0.070 33.582 9.835 1.00 9.02 C ATOM 325 CD2 PHE 35 0.518 35.900 10.413 1.00 9.02 C ATOM 326 CE1 PHE 35 1.430 33.247 10.091 1.00 9.02 C ATOM 327 CE2 PHE 35 1.879 35.581 10.673 1.00 9.02 C ATOM 328 CZ PHE 35 2.336 34.251 10.511 1.00 9.02 C ATOM 329 C PHE 35 -2.609 37.156 8.147 1.00 9.02 C ATOM 330 O PHE 35 -2.384 37.768 7.098 1.00 9.02 O ATOM 331 N TRP 36 -3.218 37.706 9.205 1.00 6.88 N ATOM 333 CA TRP 36 -3.709 39.087 9.238 1.00 6.88 C ATOM 334 CB TRP 36 -4.721 39.222 10.379 1.00 6.88 C ATOM 335 CG TRP 36 -5.652 40.436 10.310 1.00 6.88 C ATOM 336 CD2 TRP 36 -6.924 40.535 9.629 1.00 6.88 C ATOM 337 CE2 TRP 36 -7.436 41.839 9.887 1.00 6.88 C ATOM 338 CE3 TRP 36 -7.683 39.652 8.826 1.00 6.88 C ATOM 339 CD1 TRP 36 -5.463 41.653 10.929 1.00 6.88 C ATOM 340 NE1 TRP 36 -6.524 42.488 10.677 1.00 6.88 N ATOM 342 CZ2 TRP 36 -8.676 42.289 9.370 1.00 6.88 C ATOM 343 CZ3 TRP 36 -8.925 40.099 8.309 1.00 6.88 C ATOM 344 CH2 TRP 36 -9.403 41.410 8.588 1.00 6.88 C ATOM 345 C TRP 36 -2.530 40.061 9.479 1.00 6.88 C ATOM 346 O TRP 36 -1.494 39.683 10.025 1.00 6.88 O ATOM 347 N ILE 37 -2.748 41.319 9.087 1.00 6.33 N ATOM 349 CA ILE 37 -1.733 42.384 9.069 1.00 6.33 C ATOM 350 CB ILE 37 -1.902 43.223 7.756 1.00 6.33 C ATOM 351 CG2 ILE 37 -1.161 42.525 6.606 1.00 6.33 C ATOM 352 CG1 ILE 37 -3.389 43.448 7.426 1.00 6.33 C ATOM 353 CD1 ILE 37 -3.722 44.823 6.833 1.00 6.33 C ATOM 354 C ILE 37 -1.210 43.317 10.201 1.00 6.33 C ATOM 355 O ILE 37 -1.482 44.526 10.200 1.00 6.33 O ATOM 356 N SER 38 -0.409 42.751 11.118 1.00 5.63 N ATOM 358 CA SER 38 0.281 43.482 12.212 1.00 5.63 C ATOM 359 CB SER 38 0.166 42.720 13.521 1.00 5.63 C ATOM 360 OG SER 38 -1.189 42.573 13.874 1.00 5.63 O ATOM 362 C SER 38 1.755 43.567 11.751 1.00 5.63 C ATOM 363 O SER 38 2.697 43.746 12.536 1.00 5.63 O ATOM 364 N SER 39 1.860 43.531 10.424 1.00 5.56 N ATOM 366 CA SER 39 3.040 43.534 9.557 1.00 5.56 C ATOM 367 CB SER 39 2.633 42.988 8.210 1.00 5.56 C ATOM 368 OG SER 39 1.815 43.949 7.561 1.00 5.56 O ATOM 370 C SER 39 3.740 44.877 9.344 1.00 5.56 C ATOM 371 O SER 39 3.742 45.398 8.218 1.00 5.56 O ATOM 372 N PHE 40 4.259 45.482 10.407 1.00 5.81 N ATOM 374 CA PHE 40 4.891 46.800 10.293 1.00 5.81 C ATOM 375 CB PHE 40 5.252 47.322 11.695 1.00 5.81 C ATOM 376 CG PHE 40 4.210 47.046 12.767 1.00 5.81 C ATOM 377 CD1 PHE 40 3.033 47.827 12.865 1.00 5.81 C ATOM 378 CD2 PHE 40 4.422 46.024 13.721 1.00 5.81 C ATOM 379 CE1 PHE 40 2.084 47.595 13.897 1.00 5.81 C ATOM 380 CE2 PHE 40 3.480 45.781 14.760 1.00 5.81 C ATOM 381 CZ PHE 40 2.308 46.569 14.846 1.00 5.81 C ATOM 382 C PHE 40 6.150 46.767 9.411 1.00 5.81 C ATOM 383 O PHE 40 7.286 46.683 9.894 1.00 5.81 O ATOM 384 N ILE 41 5.883 46.719 8.096 1.00 4.35 N ATOM 386 CA ILE 41 6.911 46.701 7.048 1.00 4.35 C ATOM 387 CB ILE 41 6.830 45.416 6.140 1.00 4.35 C ATOM 388 CG2 ILE 41 7.235 44.179 6.960 1.00 4.35 C ATOM 389 CG1 ILE 41 5.448 45.250 5.486 1.00 4.35 C ATOM 390 CD1 ILE 41 5.468 44.701 4.053 1.00 4.35 C ATOM 391 C ILE 41 6.870 47.983 6.212 1.00 4.35 C ATOM 392 O ILE 41 6.906 47.957 4.971 1.00 4.35 O ATOM 393 N GLY 42 6.810 49.100 6.937 1.00 5.50 N ATOM 395 CA GLY 42 6.812 50.436 6.371 1.00 5.50 C ATOM 396 C GLY 42 6.240 50.799 5.015 1.00 5.50 C ATOM 397 O GLY 42 6.978 51.335 4.195 1.00 5.50 O ATOM 398 N ARG 43 5.004 50.386 4.729 1.00 4.65 N ATOM 400 CA ARG 43 4.350 50.726 3.463 1.00 4.65 C ATOM 401 CB ARG 43 4.108 49.485 2.589 1.00 4.65 C ATOM 402 CG ARG 43 3.950 49.781 1.087 1.00 4.65 C ATOM 403 CD ARG 43 3.712 48.514 0.269 1.00 4.65 C ATOM 404 NE ARG 43 4.893 47.646 0.205 1.00 4.65 N ATOM 406 CZ ARG 43 4.958 46.483 -0.443 1.00 4.65 C ATOM 407 NH1 ARG 43 3.909 46.004 -1.105 1.00 4.65 N ATOM 410 NH2 ARG 43 6.087 45.787 -0.427 1.00 4.65 N ATOM 413 C ARG 43 3.039 51.442 3.766 1.00 4.65 C ATOM 414 O ARG 43 2.586 51.460 4.916 1.00 4.65 O ATOM 415 N SER 44 2.461 52.060 2.734 1.00 4.70 N ATOM 417 CA SER 44 1.196 52.765 2.873 1.00 4.70 C ATOM 418 CB SER 44 1.291 54.168 2.310 1.00 4.70 C ATOM 419 OG SER 44 2.318 54.836 3.012 1.00 4.70 O ATOM 421 C SER 44 0.037 51.950 2.318 1.00 4.70 C ATOM 422 O SER 44 -0.213 51.874 1.107 1.00 4.70 O ATOM 423 N LYS 45 -0.566 51.247 3.273 1.00 2.31 N ATOM 425 CA LYS 45 -1.692 50.342 3.138 1.00 2.31 C ATOM 426 CG LYS 45 -2.170 47.826 3.202 1.00 2.31 C ATOM 427 CD LYS 45 -1.846 46.522 3.922 1.00 2.31 C ATOM 428 CE LYS 45 -2.578 45.329 3.311 1.00 2.31 C ATOM 429 NZ LYS 45 -2.099 44.970 1.943 1.00 2.31 N ATOM 433 C LYS 45 -2.951 50.993 3.682 1.00 2.31 C ATOM 434 O LYS 45 -3.089 51.179 4.896 1.00 2.31 O ATOM 435 CB LYS 45 -1.420 49.003 3.820 1.00 2.31 C TER END