####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS322_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 3 - 26 4.88 8.52 LONGEST_CONTINUOUS_SEGMENT: 24 4 - 27 4.85 8.28 LONGEST_CONTINUOUS_SEGMENT: 24 5 - 28 4.88 8.27 LCS_AVERAGE: 48.19 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 9 - 20 1.78 14.47 LCS_AVERAGE: 19.16 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 9 - 18 0.88 12.95 LCS_AVERAGE: 14.36 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 18 3 3 3 3 3 4 7 10 13 15 17 18 20 22 24 26 28 30 32 35 LCS_GDT V 3 V 3 3 5 24 3 3 3 4 5 6 8 10 14 16 19 21 25 27 28 32 34 35 36 39 LCS_GDT Q 4 Q 4 3 5 24 3 3 3 4 9 10 12 13 15 16 19 21 25 27 29 32 34 35 36 39 LCS_GDT G 5 G 5 4 5 24 1 3 4 6 8 11 15 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT P 6 P 6 4 5 24 2 3 4 5 6 11 14 16 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT W 7 W 7 4 5 24 2 3 4 5 6 7 13 15 17 17 21 23 26 28 30 32 34 35 36 39 LCS_GDT V 8 V 8 4 11 24 1 3 4 5 6 12 14 15 17 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT G 9 G 9 10 12 24 5 7 10 11 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT S 10 S 10 10 12 24 5 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT S 11 S 11 10 12 24 4 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT Y 12 Y 12 10 12 24 4 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT V 13 V 13 10 12 24 4 7 10 11 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT A 14 A 14 10 12 24 5 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT E 15 E 15 10 12 24 5 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 33 35 36 39 LCS_GDT T 16 T 16 10 12 24 5 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT G 17 G 17 10 12 24 5 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT Q 18 Q 18 10 12 24 4 7 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT N 19 N 19 4 12 24 3 3 4 5 7 11 13 13 17 20 23 25 27 28 30 32 34 35 36 39 LCS_GDT W 20 W 20 9 12 24 6 8 9 9 10 11 13 13 17 18 21 25 26 28 30 32 34 35 36 39 LCS_GDT A 21 A 21 9 10 24 6 8 9 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT S 22 S 22 9 10 24 6 8 9 9 12 13 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT L 23 L 23 9 10 24 6 8 9 9 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT A 24 A 24 9 10 24 6 8 9 9 10 11 13 15 17 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT A 25 A 25 9 10 24 6 8 9 9 10 11 13 13 17 20 23 25 27 28 30 32 34 35 36 39 LCS_GDT N 26 N 26 9 10 24 4 8 9 9 10 11 13 14 17 20 23 25 27 28 30 32 34 35 36 39 LCS_GDT E 27 E 27 9 10 24 4 8 9 9 10 11 13 13 17 18 19 22 25 27 29 32 34 35 36 39 LCS_GDT L 28 L 28 9 10 24 3 5 9 9 10 11 13 13 17 18 19 21 25 27 28 32 34 35 36 39 LCS_GDT R 29 R 29 4 10 19 3 3 5 6 10 11 13 13 17 18 19 21 25 27 28 32 34 35 36 39 LCS_GDT V 30 V 30 4 9 19 3 3 5 6 7 9 11 13 17 18 19 21 25 27 28 32 34 35 36 39 LCS_GDT T 31 T 31 4 5 19 3 3 4 5 7 9 9 11 13 15 17 18 21 25 25 28 31 34 36 39 LCS_GDT E 32 E 32 4 5 19 3 3 4 5 7 7 8 11 13 17 19 23 25 27 30 32 34 35 36 39 LCS_GDT R 33 R 33 4 5 19 3 3 4 5 7 7 8 10 15 20 23 25 27 28 30 32 33 35 36 39 LCS_GDT P 34 P 34 3 5 19 3 3 7 12 15 15 16 17 19 21 23 25 27 28 30 32 33 35 35 39 LCS_GDT F 35 F 35 3 7 19 3 3 7 12 15 15 16 17 19 21 23 25 27 28 30 32 33 35 35 39 LCS_GDT W 36 W 36 5 7 19 4 4 5 12 15 15 16 17 19 21 23 25 27 28 30 32 33 35 36 39 LCS_GDT I 37 I 37 5 7 19 4 4 5 6 6 7 12 17 19 21 23 25 27 28 30 32 34 35 36 39 LCS_GDT S 38 S 38 5 7 17 4 4 5 6 6 9 9 11 17 20 23 25 27 28 30 32 33 35 36 39 LCS_GDT S 39 S 39 5 7 15 4 4 5 6 6 6 8 15 18 20 23 25 27 28 30 32 34 35 36 39 LCS_GDT F 40 F 40 5 7 15 4 4 5 6 6 6 7 10 12 13 17 21 25 27 29 32 34 35 36 39 LCS_GDT I 41 I 41 5 7 15 4 4 5 6 6 6 8 10 12 18 19 21 25 27 28 32 34 35 36 39 LCS_GDT G 42 G 42 3 7 15 3 3 4 4 5 6 7 9 14 18 19 21 25 27 28 32 34 35 36 39 LCS_GDT R 43 R 43 3 5 15 3 3 4 4 5 5 6 9 12 18 19 21 25 27 28 29 34 35 36 39 LCS_GDT S 44 S 44 3 5 14 0 3 4 4 5 5 6 8 9 11 13 15 21 22 25 28 29 31 32 34 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 3 3 6 6 8 8 9 11 13 14 14 25 27 30 32 34 LCS_AVERAGE LCS_A: 27.24 ( 14.36 19.16 48.19 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 10 12 15 15 16 17 19 21 23 25 27 28 30 32 34 35 36 39 GDT PERCENT_AT 13.64 18.18 22.73 27.27 34.09 34.09 36.36 38.64 43.18 47.73 52.27 56.82 61.36 63.64 68.18 72.73 77.27 79.55 81.82 88.64 GDT RMS_LOCAL 0.32 0.71 0.88 1.45 1.68 1.68 1.94 2.60 2.79 3.19 3.54 3.77 4.20 4.32 4.66 5.12 5.95 5.68 6.09 6.47 GDT RMS_ALL_AT 12.42 12.54 12.95 10.67 10.64 10.64 10.63 10.04 10.14 9.99 9.70 9.72 9.27 9.46 9.18 8.76 7.80 8.49 7.87 8.04 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.654 0 0.666 0.621 16.439 0.000 0.000 - LGA V 3 V 3 9.313 0 0.674 1.370 11.319 0.000 0.000 9.700 LGA Q 4 Q 4 9.886 0 0.689 0.890 18.648 0.000 0.000 17.672 LGA G 5 G 5 5.052 0 0.107 0.107 6.730 0.000 0.000 - LGA P 6 P 6 5.533 0 0.105 0.421 7.599 0.000 0.000 7.599 LGA W 7 W 7 8.500 0 0.502 1.348 20.089 0.000 0.000 20.051 LGA V 8 V 8 5.945 0 0.176 1.218 6.907 4.091 2.338 5.704 LGA G 9 G 9 2.363 0 0.453 0.453 3.598 28.636 28.636 - LGA S 10 S 10 1.555 0 0.047 0.158 2.009 59.091 61.212 1.095 LGA S 11 S 11 1.355 0 0.137 0.869 1.690 58.182 58.182 1.168 LGA Y 12 Y 12 2.719 0 0.041 1.101 14.796 38.636 13.788 14.796 LGA V 13 V 13 1.933 0 0.068 1.106 5.393 63.182 45.455 5.393 LGA A 14 A 14 1.003 0 0.028 0.054 2.013 62.727 63.273 - LGA E 15 E 15 2.297 0 0.035 1.183 3.241 40.000 40.000 1.135 LGA T 16 T 16 1.695 0 0.127 0.139 2.382 50.909 51.169 1.007 LGA G 17 G 17 1.556 0 0.162 0.162 1.556 61.818 61.818 - LGA Q 18 Q 18 1.409 0 0.570 0.943 9.234 55.909 26.061 8.042 LGA N 19 N 19 6.020 0 0.016 1.121 9.187 2.727 1.364 8.147 LGA W 20 W 20 5.966 0 0.619 0.776 17.130 11.364 3.247 17.110 LGA A 21 A 21 2.394 0 0.061 0.075 4.537 22.273 18.182 - LGA S 22 S 22 4.240 0 0.016 0.610 5.913 18.182 12.121 5.913 LGA L 23 L 23 2.144 0 0.040 0.222 8.263 31.364 16.591 8.263 LGA A 24 A 24 6.082 0 0.145 0.162 9.455 2.727 2.182 - LGA A 25 A 25 9.053 0 0.039 0.051 12.093 0.000 0.000 - LGA N 26 N 26 9.153 0 0.325 0.400 10.356 0.000 0.000 9.486 LGA E 27 E 27 12.264 0 0.065 0.932 16.230 0.000 0.000 11.787 LGA L 28 L 28 15.670 0 0.107 1.402 18.156 0.000 0.000 16.971 LGA R 29 R 29 16.969 0 0.577 0.882 24.385 0.000 0.000 24.385 LGA V 30 V 30 13.889 0 0.165 1.032 15.843 0.000 0.000 13.812 LGA T 31 T 31 14.727 0 0.145 0.991 19.209 0.000 0.000 19.209 LGA E 32 E 32 10.496 0 0.328 1.321 14.417 0.000 0.000 14.057 LGA R 33 R 33 5.643 0 0.028 1.197 8.068 0.000 11.570 2.578 LGA P 34 P 34 2.257 0 0.661 0.621 4.453 25.000 23.896 3.600 LGA F 35 F 35 1.867 0 0.525 1.462 9.457 37.727 17.521 9.457 LGA W 36 W 36 2.022 0 0.634 1.315 9.650 37.727 10.909 8.840 LGA I 37 I 37 4.818 0 0.072 0.401 8.317 10.000 5.000 8.050 LGA S 38 S 38 7.600 0 0.174 0.658 9.121 0.000 0.000 6.993 LGA S 39 S 39 6.523 0 0.129 0.227 10.551 0.000 0.000 5.300 LGA F 40 F 40 10.771 0 0.067 0.973 14.683 0.000 0.000 13.125 LGA I 41 I 41 14.871 0 0.638 0.639 17.451 0.000 0.000 13.282 LGA G 42 G 42 19.279 0 0.064 0.064 21.647 0.000 0.000 - LGA R 43 R 43 19.960 0 0.605 1.797 22.658 0.000 0.000 17.284 LGA S 44 S 44 23.256 0 0.252 0.507 25.022 0.000 0.000 24.929 LGA K 45 K 45 23.242 0 0.320 0.606 27.266 0.000 0.000 25.951 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.625 7.577 9.196 16.415 13.057 8.571 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.50 39.205 34.914 0.654 LGA_LOCAL RMSD: 2.500 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.069 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.625 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.903644 * X + -0.414028 * Y + -0.109587 * Z + -17.519915 Y_new = 0.422829 * X + 0.903146 * Y + 0.074453 * Z + -39.733906 Z_new = 0.068147 * X + -0.113615 * Y + 0.991185 * Z + -33.773533 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.437652 -0.068200 -0.114127 [DEG: 25.0756 -3.9076 -6.5390 ] ZXZ: -2.167558 0.132876 2.601312 [DEG: -124.1919 7.6132 149.0442 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS322_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.50 34.914 7.63 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS322_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 17 N ALA 2 0.382 32.792 1.896 1.00 10.26 ATOM 19 CA ALA 2 0.518 33.728 3.019 1.00 10.26 ATOM 21 CB ALA 2 0.172 33.000 4.319 1.00 10.26 ATOM 25 C ALA 2 1.906 34.419 3.058 1.00 10.26 ATOM 26 O ALA 2 2.060 35.516 3.583 1.00 10.26 ATOM 27 N VAL 3 2.917 33.774 2.465 1.00 10.06 ATOM 29 CA VAL 3 4.299 34.244 2.258 1.00 10.06 ATOM 31 CB VAL 3 5.141 33.051 1.743 1.00 10.06 ATOM 33 CG1 VAL 3 4.713 32.561 0.351 1.00 10.06 ATOM 37 CG2 VAL 3 6.654 33.297 1.719 1.00 10.06 ATOM 41 C VAL 3 4.483 35.447 1.332 1.00 10.06 ATOM 42 O VAL 3 5.553 36.048 1.337 1.00 10.06 ATOM 43 N GLN 4 3.450 35.880 0.603 1.00 11.68 ATOM 45 CA GLN 4 3.434 37.248 0.052 1.00 11.68 ATOM 47 CB GLN 4 2.130 37.463 -0.734 1.00 11.68 ATOM 50 CG GLN 4 2.098 36.630 -2.027 1.00 11.68 ATOM 53 CD GLN 4 0.711 36.604 -2.657 1.00 11.68 ATOM 54 OE1 GLN 4 0.378 37.376 -3.539 1.00 11.68 ATOM 55 NE2 GLN 4 -0.147 35.709 -2.227 1.00 11.68 ATOM 58 C GLN 4 3.599 38.309 1.167 1.00 11.68 ATOM 59 O GLN 4 3.894 39.466 0.874 1.00 11.68 ATOM 60 N GLY 5 3.490 37.901 2.444 1.00 11.26 ATOM 62 CA GLY 5 3.977 38.652 3.587 1.00 11.26 ATOM 65 C GLY 5 4.954 37.941 4.516 1.00 11.26 ATOM 66 O GLY 5 4.915 36.719 4.651 1.00 11.26 ATOM 67 N PRO 6 5.767 38.714 5.264 1.00 10.85 ATOM 68 CD PRO 6 5.998 40.147 5.114 1.00 10.85 ATOM 71 CG PRO 6 7.312 40.436 5.836 1.00 10.85 ATOM 74 CB PRO 6 7.334 39.382 6.939 1.00 10.85 ATOM 77 CA PRO 6 6.641 38.174 6.297 1.00 10.85 ATOM 79 C PRO 6 5.942 37.315 7.372 1.00 10.85 ATOM 80 O PRO 6 6.549 36.358 7.847 1.00 10.85 ATOM 81 N TRP 7 4.710 37.666 7.796 1.00 8.80 ATOM 83 CA TRP 7 4.346 37.494 9.218 1.00 8.80 ATOM 85 CB TRP 7 4.490 38.859 9.913 1.00 8.80 ATOM 88 CG TRP 7 4.296 38.919 11.405 1.00 8.80 ATOM 89 CD1 TRP 7 5.242 38.659 12.342 1.00 8.80 ATOM 91 NE1 TRP 7 4.754 38.955 13.602 1.00 8.80 ATOM 93 CE2 TRP 7 3.464 39.433 13.545 1.00 8.80 ATOM 94 CZ2 TRP 7 2.589 39.924 14.525 1.00 8.80 ATOM 96 CH2 TRP 7 1.318 40.378 14.136 1.00 8.80 ATOM 98 CZ3 TRP 7 0.933 40.305 12.786 1.00 8.80 ATOM 100 CE3 TRP 7 1.824 39.815 11.811 1.00 8.80 ATOM 102 CD2 TRP 7 3.124 39.381 12.159 1.00 8.80 ATOM 103 C TRP 7 2.993 36.865 9.600 1.00 8.80 ATOM 104 O TRP 7 2.979 36.073 10.531 1.00 8.80 ATOM 105 N VAL 8 1.890 37.054 8.861 1.00 7.05 ATOM 107 CA VAL 8 0.878 35.962 8.772 1.00 7.05 ATOM 109 CB VAL 8 -0.514 36.451 8.317 1.00 7.05 ATOM 111 CG1 VAL 8 -1.129 37.381 9.367 1.00 7.05 ATOM 115 CG2 VAL 8 -0.505 37.161 6.960 1.00 7.05 ATOM 119 C VAL 8 1.415 34.851 7.840 1.00 7.05 ATOM 120 O VAL 8 0.731 33.872 7.564 1.00 7.05 ATOM 121 N GLY 9 2.652 35.010 7.348 1.00 8.50 ATOM 123 CA GLY 9 3.266 34.230 6.293 1.00 8.50 ATOM 126 C GLY 9 4.415 33.340 6.701 1.00 8.50 ATOM 127 O GLY 9 4.807 33.289 7.869 1.00 8.50 ATOM 128 N SER 10 4.853 32.540 5.723 1.00 9.65 ATOM 130 CA SER 10 5.387 31.198 5.954 1.00 9.65 ATOM 132 CB SER 10 5.704 30.473 4.644 1.00 9.65 ATOM 135 OG SER 10 6.778 31.090 3.970 1.00 9.65 ATOM 137 C SER 10 6.597 31.126 6.866 1.00 9.65 ATOM 138 O SER 10 6.754 30.096 7.488 1.00 9.65 ATOM 139 N SER 11 7.410 32.172 7.004 1.00 12.13 ATOM 141 CA SER 11 8.429 32.258 8.060 1.00 12.13 ATOM 143 CB SER 11 9.204 33.592 7.956 1.00 12.13 ATOM 146 OG SER 11 8.611 34.518 7.048 1.00 12.13 ATOM 148 C SER 11 7.799 32.070 9.476 1.00 12.13 ATOM 149 O SER 11 7.967 31.047 10.158 1.00 12.13 ATOM 150 N TYR 12 6.987 33.040 9.909 1.00 11.16 ATOM 152 CA TYR 12 6.426 33.046 11.264 1.00 11.16 ATOM 154 CB TYR 12 5.996 34.469 11.657 1.00 11.16 ATOM 157 CG TYR 12 7.128 35.400 12.067 1.00 11.16 ATOM 158 CD1 TYR 12 7.738 36.248 11.122 1.00 11.16 ATOM 160 CE1 TYR 12 8.768 37.126 11.510 1.00 11.16 ATOM 162 CZ TYR 12 9.197 37.163 12.853 1.00 11.16 ATOM 163 OH TYR 12 10.177 38.025 13.225 1.00 11.16 ATOM 165 CE2 TYR 12 8.590 36.315 13.804 1.00 11.16 ATOM 167 CD2 TYR 12 7.566 35.431 13.406 1.00 11.16 ATOM 169 C TYR 12 5.248 32.065 11.464 1.00 11.16 ATOM 170 O TYR 12 5.102 31.444 12.529 1.00 11.16 ATOM 171 N VAL 13 4.405 31.837 10.441 1.00 10.23 ATOM 173 CA VAL 13 3.463 30.715 10.564 1.00 10.23 ATOM 175 CB VAL 13 2.309 30.612 9.550 1.00 10.23 ATOM 177 CG1 VAL 13 1.309 31.748 9.713 1.00 10.23 ATOM 181 CG2 VAL 13 2.701 30.478 8.091 1.00 10.23 ATOM 185 C VAL 13 4.187 29.369 10.634 1.00 10.23 ATOM 186 O VAL 13 3.711 28.499 11.361 1.00 10.23 ATOM 187 N ALA 14 5.332 29.178 9.958 1.00 12.89 ATOM 189 CA ALA 14 6.104 27.952 10.129 1.00 12.89 ATOM 191 CB ALA 14 7.231 27.774 9.106 1.00 12.89 ATOM 195 C ALA 14 6.660 27.796 11.551 1.00 12.89 ATOM 196 O ALA 14 6.631 26.671 12.044 1.00 12.89 ATOM 197 N GLU 15 7.049 28.873 12.259 1.00 14.68 ATOM 199 CA GLU 15 7.261 28.708 13.719 1.00 14.68 ATOM 201 CB GLU 15 7.610 30.035 14.436 1.00 14.68 ATOM 204 CG GLU 15 8.921 30.756 14.115 1.00 14.68 ATOM 207 CD GLU 15 9.154 31.894 15.137 1.00 14.68 ATOM 208 OE1 GLU 15 10.224 31.904 15.787 1.00 14.68 ATOM 209 OE2 GLU 15 8.252 32.755 15.298 1.00 14.68 ATOM 210 C GLU 15 6.002 28.209 14.446 1.00 14.68 ATOM 211 O GLU 15 6.064 27.312 15.285 1.00 14.68 ATOM 212 N THR 16 4.846 28.819 14.157 1.00 14.23 ATOM 214 CA THR 16 3.664 28.678 15.035 1.00 14.23 ATOM 216 CB THR 16 2.897 30.011 15.132 1.00 14.23 ATOM 218 CG2 THR 16 3.721 31.117 15.790 1.00 14.23 ATOM 222 OG1 THR 16 2.501 30.506 13.874 1.00 14.23 ATOM 224 C THR 16 2.743 27.525 14.665 1.00 14.23 ATOM 225 O THR 16 1.660 27.414 15.241 1.00 14.23 ATOM 226 N GLY 17 3.110 26.687 13.691 1.00 14.20 ATOM 228 CA GLY 17 2.194 25.694 13.118 1.00 14.20 ATOM 231 C GLY 17 0.906 26.317 12.612 1.00 14.20 ATOM 232 O GLY 17 -0.163 25.724 12.705 1.00 14.20 ATOM 233 N GLN 18 1.019 27.548 12.104 1.00 12.78 ATOM 235 CA GLN 18 -0.084 28.338 11.576 1.00 12.78 ATOM 237 CB GLN 18 -0.632 27.647 10.299 1.00 12.78 ATOM 240 CG GLN 18 0.426 26.915 9.437 1.00 12.78 ATOM 243 CD GLN 18 -0.128 26.461 8.095 1.00 12.78 ATOM 244 OE1 GLN 18 -0.430 27.268 7.236 1.00 12.78 ATOM 245 NE2 GLN 18 -0.285 25.175 7.861 1.00 12.78 ATOM 248 C GLN 18 -1.128 28.654 12.662 1.00 12.78 ATOM 249 O GLN 18 -2.249 29.015 12.328 1.00 12.78 ATOM 250 N ASN 19 -0.768 28.651 13.958 1.00 12.25 ATOM 252 CA ASN 19 -1.519 29.391 14.984 1.00 12.25 ATOM 254 CB ASN 19 -0.943 29.148 16.387 1.00 12.25 ATOM 257 CG ASN 19 -1.339 27.794 16.946 1.00 12.25 ATOM 258 OD1 ASN 19 -2.488 27.566 17.276 1.00 12.25 ATOM 259 ND2 ASN 19 -0.419 26.874 17.091 1.00 12.25 ATOM 262 C ASN 19 -1.615 30.897 14.636 1.00 12.25 ATOM 263 O ASN 19 -2.610 31.532 14.968 1.00 12.25 ATOM 264 N TRP 20 -0.665 31.468 13.879 1.00 9.84 ATOM 266 CA TRP 20 -0.838 32.781 13.229 1.00 9.84 ATOM 268 CB TRP 20 0.532 33.356 12.834 1.00 9.84 ATOM 271 CG TRP 20 1.265 34.227 13.823 1.00 9.84 ATOM 272 CD1 TRP 20 2.367 34.933 13.487 1.00 9.84 ATOM 274 NE1 TRP 20 2.808 35.682 14.551 1.00 9.84 ATOM 276 CE2 TRP 20 2.043 35.465 15.673 1.00 9.84 ATOM 277 CZ2 TRP 20 2.118 35.966 16.983 1.00 9.84 ATOM 279 CH2 TRP 20 1.221 35.485 17.949 1.00 9.84 ATOM 281 CZ3 TRP 20 0.258 34.528 17.585 1.00 9.84 ATOM 283 CE3 TRP 20 0.169 34.058 16.259 1.00 9.84 ATOM 285 CD2 TRP 20 1.059 34.510 15.255 1.00 9.84 ATOM 286 C TRP 20 -1.868 32.798 12.087 1.00 9.84 ATOM 287 O TRP 20 -2.683 33.719 12.050 1.00 9.84 ATOM 288 N ALA 21 -1.932 31.771 11.228 1.00 8.71 ATOM 290 CA ALA 21 -3.038 31.641 10.270 1.00 8.71 ATOM 292 CB ALA 21 -2.749 30.536 9.252 1.00 8.71 ATOM 296 C ALA 21 -4.391 31.413 10.949 1.00 8.71 ATOM 297 O ALA 21 -5.418 31.696 10.353 1.00 8.71 ATOM 298 N SER 22 -4.388 30.945 12.194 1.00 10.88 ATOM 300 CA SER 22 -5.563 30.754 13.033 1.00 10.88 ATOM 302 CB SER 22 -5.306 29.673 14.091 1.00 10.88 ATOM 305 OG SER 22 -4.866 28.471 13.487 1.00 10.88 ATOM 307 C SER 22 -5.989 32.057 13.701 1.00 10.88 ATOM 308 O SER 22 -7.174 32.333 13.761 1.00 10.88 ATOM 309 N LEU 23 -5.067 32.937 14.093 1.00 11.09 ATOM 311 CA LEU 23 -5.415 34.327 14.395 1.00 11.09 ATOM 313 CB LEU 23 -4.190 35.059 14.981 1.00 11.09 ATOM 316 CG LEU 23 -3.733 34.710 16.411 1.00 11.09 ATOM 318 CD1 LEU 23 -2.877 35.876 16.926 1.00 11.09 ATOM 322 CD2 LEU 23 -4.872 34.517 17.414 1.00 11.09 ATOM 326 C LEU 23 -5.942 35.091 13.164 1.00 11.09 ATOM 327 O LEU 23 -6.733 36.017 13.340 1.00 11.09 ATOM 328 N ALA 24 -5.483 34.768 11.948 1.00 9.40 ATOM 330 CA ALA 24 -5.993 35.370 10.714 1.00 9.40 ATOM 332 CB ALA 24 -5.030 35.075 9.556 1.00 9.40 ATOM 336 C ALA 24 -7.447 34.935 10.422 1.00 9.40 ATOM 337 O ALA 24 -8.407 35.721 10.505 1.00 9.40 ATOM 338 N ALA 25 -7.586 33.630 10.171 1.00 10.98 ATOM 340 CA ALA 25 -8.825 32.909 9.933 1.00 10.98 ATOM 342 CB ALA 25 -8.560 31.393 10.033 1.00 10.98 ATOM 346 C ALA 25 -9.904 33.265 10.953 1.00 10.98 ATOM 347 O ALA 25 -11.012 33.657 10.588 1.00 10.98 ATOM 348 N ASN 26 -9.516 33.171 12.223 1.00 13.06 ATOM 350 CA ASN 26 -10.356 33.301 13.395 1.00 13.06 ATOM 352 CB ASN 26 -10.153 32.124 14.371 1.00 13.06 ATOM 355 CG ASN 26 -9.962 30.768 13.707 1.00 13.06 ATOM 356 OD1 ASN 26 -10.540 30.435 12.688 1.00 13.06 ATOM 357 ND2 ASN 26 -9.101 29.939 14.246 1.00 13.06 ATOM 360 C ASN 26 -10.175 34.692 14.039 1.00 13.06 ATOM 361 O ASN 26 -10.394 34.854 15.238 1.00 13.06 ATOM 362 N GLU 27 -9.817 35.713 13.243 1.00 13.35 ATOM 364 CA GLU 27 -10.297 37.068 13.533 1.00 13.35 ATOM 366 CB GLU 27 -9.140 37.984 14.004 1.00 13.35 ATOM 369 CG GLU 27 -9.568 39.410 14.429 1.00 13.35 ATOM 372 CD GLU 27 -8.495 40.153 15.250 1.00 13.35 ATOM 373 OE1 GLU 27 -7.964 41.212 14.845 1.00 13.35 ATOM 374 OE2 GLU 27 -8.108 39.669 16.342 1.00 13.35 ATOM 375 C GLU 27 -11.113 37.737 12.413 1.00 13.35 ATOM 376 O GLU 27 -12.051 38.448 12.767 1.00 13.35 ATOM 377 N LEU 28 -10.833 37.549 11.103 1.00 13.44 ATOM 379 CA LEU 28 -11.637 38.285 10.083 1.00 13.44 ATOM 381 CB LEU 28 -11.035 39.699 9.900 1.00 13.44 ATOM 384 CG LEU 28 -11.954 40.741 9.226 1.00 13.44 ATOM 386 CD1 LEU 28 -13.312 40.889 9.918 1.00 13.44 ATOM 390 CD2 LEU 28 -11.282 42.112 9.251 1.00 13.44 ATOM 394 C LEU 28 -11.889 37.586 8.735 1.00 13.44 ATOM 395 O LEU 28 -12.705 38.062 7.939 1.00 13.44 ATOM 396 N ARG 29 -11.188 36.471 8.510 1.00 15.97 ATOM 398 CA ARG 29 -10.925 35.689 7.281 1.00 15.97 ATOM 400 CB ARG 29 -11.507 36.258 5.973 1.00 15.97 ATOM 403 CG ARG 29 -13.003 35.909 5.810 1.00 15.97 ATOM 406 CD ARG 29 -13.734 36.805 4.799 1.00 15.97 ATOM 409 NE ARG 29 -13.706 38.212 5.241 1.00 15.97 ATOM 411 CZ ARG 29 -12.900 39.153 4.789 1.00 15.97 ATOM 412 NH1 ARG 29 -12.654 40.198 5.511 1.00 15.97 ATOM 415 NH2 ARG 29 -12.276 39.060 3.654 1.00 15.97 ATOM 418 C ARG 29 -9.389 35.542 7.193 1.00 15.97 ATOM 419 O ARG 29 -8.631 36.384 7.684 1.00 15.97 ATOM 420 N VAL 30 -8.911 34.447 6.600 1.00 15.82 ATOM 422 CA VAL 30 -7.466 34.176 6.426 1.00 15.82 ATOM 424 CB VAL 30 -7.237 32.774 5.806 1.00 15.82 ATOM 426 CG1 VAL 30 -7.408 31.681 6.846 1.00 15.82 ATOM 430 CG2 VAL 30 -8.151 32.452 4.614 1.00 15.82 ATOM 434 C VAL 30 -6.787 35.151 5.467 1.00 15.82 ATOM 435 O VAL 30 -7.449 35.725 4.606 1.00 15.82 ATOM 436 N THR 31 -5.457 35.272 5.560 1.00 17.06 ATOM 438 CA THR 31 -4.593 36.247 4.840 1.00 17.06 ATOM 440 CB THR 31 -4.705 36.108 3.307 1.00 17.06 ATOM 442 CG2 THR 31 -3.550 36.793 2.578 1.00 17.06 ATOM 446 OG1 THR 31 -4.672 34.747 2.938 1.00 17.06 ATOM 448 C THR 31 -4.869 37.690 5.275 1.00 17.06 ATOM 449 O THR 31 -3.934 38.468 5.452 1.00 17.06 ATOM 450 N GLU 32 -6.132 38.017 5.563 1.00 16.78 ATOM 452 CA GLU 32 -6.490 38.947 6.634 1.00 16.78 ATOM 454 CB GLU 32 -7.961 39.419 6.578 1.00 16.78 ATOM 457 CG GLU 32 -8.495 39.717 5.169 1.00 16.78 ATOM 460 CD GLU 32 -9.654 40.733 5.145 1.00 16.78 ATOM 461 OE1 GLU 32 -10.257 40.902 4.063 1.00 16.78 ATOM 462 OE2 GLU 32 -10.039 41.303 6.185 1.00 16.78 ATOM 463 C GLU 32 -6.049 38.437 8.046 1.00 16.78 ATOM 464 O GLU 32 -4.881 38.108 8.233 1.00 16.78 ATOM 465 N ARG 33 -6.904 38.504 9.091 1.00 14.44 ATOM 467 CA ARG 33 -6.704 39.460 10.235 1.00 14.44 ATOM 469 CB ARG 33 -5.614 38.963 11.214 1.00 14.44 ATOM 472 CG ARG 33 -4.885 40.046 12.028 1.00 14.44 ATOM 475 CD ARG 33 -3.846 39.433 12.985 1.00 14.44 ATOM 478 NE ARG 33 -4.476 38.528 13.958 1.00 14.44 ATOM 480 CZ ARG 33 -5.290 38.872 14.938 1.00 14.44 ATOM 481 NH1 ARG 33 -6.099 37.984 15.428 1.00 14.44 ATOM 484 NH2 ARG 33 -5.387 40.081 15.399 1.00 14.44 ATOM 487 C ARG 33 -6.410 40.854 9.634 1.00 14.44 ATOM 488 O ARG 33 -5.519 41.038 8.775 1.00 14.44 ATOM 489 N PRO 34 -7.146 41.875 10.103 1.00 12.48 ATOM 490 CD PRO 34 -8.060 41.890 11.239 1.00 12.48 ATOM 493 CG PRO 34 -8.307 43.363 11.548 1.00 12.48 ATOM 496 CB PRO 34 -8.189 44.022 10.174 1.00 12.48 ATOM 499 CA PRO 34 -7.167 43.158 9.424 1.00 12.48 ATOM 501 C PRO 34 -5.802 43.837 9.356 1.00 12.48 ATOM 502 O PRO 34 -5.622 44.720 8.528 1.00 12.48 ATOM 503 N PHE 35 -4.834 43.409 10.173 1.00 10.98 ATOM 505 CA PHE 35 -3.472 43.910 10.104 1.00 10.98 ATOM 507 CB PHE 35 -2.658 43.491 11.333 1.00 10.98 ATOM 510 CG PHE 35 -1.333 44.228 11.384 1.00 10.98 ATOM 511 CD1 PHE 35 -1.319 45.618 11.622 1.00 10.98 ATOM 513 CE1 PHE 35 -0.116 46.339 11.522 1.00 10.98 ATOM 515 CZ PHE 35 1.080 45.665 11.206 1.00 10.98 ATOM 517 CE2 PHE 35 1.072 44.275 10.998 1.00 10.98 ATOM 519 CD2 PHE 35 -0.133 43.558 11.076 1.00 10.98 ATOM 521 C PHE 35 -2.725 43.663 8.803 1.00 10.98 ATOM 522 O PHE 35 -2.401 44.629 8.108 1.00 10.98 ATOM 523 N TRP 36 -2.411 42.406 8.483 1.00 10.03 ATOM 525 CA TRP 36 -1.539 42.175 7.340 1.00 10.03 ATOM 527 CB TRP 36 -0.833 40.821 7.375 1.00 10.03 ATOM 530 CG TRP 36 0.263 40.823 6.357 1.00 10.03 ATOM 531 CD1 TRP 36 1.399 41.553 6.454 1.00 10.03 ATOM 533 NE1 TRP 36 2.056 41.549 5.242 1.00 10.03 ATOM 535 CE2 TRP 36 1.356 40.837 4.289 1.00 10.03 ATOM 536 CZ2 TRP 36 1.561 40.603 2.922 1.00 10.03 ATOM 538 CH2 TRP 36 0.654 39.788 2.225 1.00 10.03 ATOM 540 CZ3 TRP 36 -0.466 39.257 2.888 1.00 10.03 ATOM 542 CE3 TRP 36 -0.685 39.534 4.250 1.00 10.03 ATOM 544 CD2 TRP 36 0.228 40.316 4.989 1.00 10.03 ATOM 545 C TRP 36 -2.279 42.407 6.027 1.00 10.03 ATOM 546 O TRP 36 -1.662 42.962 5.122 1.00 10.03 ATOM 547 N ILE 37 -3.599 42.151 5.932 1.00 7.69 ATOM 549 CA ILE 37 -4.314 42.655 4.732 1.00 7.69 ATOM 551 CB ILE 37 -5.760 42.131 4.671 1.00 7.69 ATOM 553 CG2 ILE 37 -6.607 42.684 5.831 1.00 7.69 ATOM 557 CG1 ILE 37 -6.482 42.432 3.340 1.00 7.69 ATOM 560 CD1 ILE 37 -5.835 41.736 2.139 1.00 7.69 ATOM 564 C ILE 37 -4.305 44.188 4.643 1.00 7.69 ATOM 565 O ILE 37 -4.168 44.744 3.546 1.00 7.69 ATOM 566 N SER 38 -4.402 44.889 5.793 1.00 6.76 ATOM 568 CA SER 38 -4.327 46.344 5.784 1.00 6.76 ATOM 570 CB SER 38 -4.491 47.058 7.125 1.00 6.76 ATOM 573 OG SER 38 -4.562 48.445 6.849 1.00 6.76 ATOM 575 C SER 38 -3.038 46.788 5.162 1.00 6.76 ATOM 576 O SER 38 -3.119 47.608 4.258 1.00 6.76 ATOM 577 N SER 39 -1.903 46.205 5.561 1.00 7.02 ATOM 579 CA SER 39 -0.610 46.600 5.017 1.00 7.02 ATOM 581 CB SER 39 0.535 46.112 5.922 1.00 7.02 ATOM 584 OG SER 39 0.506 44.713 6.148 1.00 7.02 ATOM 586 C SER 39 -0.330 46.156 3.587 1.00 7.02 ATOM 587 O SER 39 0.300 46.896 2.837 1.00 7.02 ATOM 588 N PHE 40 -0.760 44.954 3.206 1.00 7.04 ATOM 590 CA PHE 40 -0.551 44.409 1.872 1.00 7.04 ATOM 592 CB PHE 40 -0.998 42.939 1.881 1.00 7.04 ATOM 595 CG PHE 40 -0.780 42.133 0.607 1.00 7.04 ATOM 596 CD1 PHE 40 0.377 42.301 -0.185 1.00 7.04 ATOM 598 CE1 PHE 40 0.590 41.485 -1.311 1.00 7.04 ATOM 600 CZ PHE 40 -0.346 40.495 -1.655 1.00 7.04 ATOM 602 CE2 PHE 40 -1.498 40.321 -0.870 1.00 7.04 ATOM 604 CD2 PHE 40 -1.710 41.134 0.258 1.00 7.04 ATOM 606 C PHE 40 -1.332 45.225 0.830 1.00 7.04 ATOM 607 O PHE 40 -0.795 45.488 -0.241 1.00 7.04 ATOM 608 N ILE 41 -2.565 45.669 1.148 1.00 5.98 ATOM 610 CA ILE 41 -3.489 46.174 0.112 1.00 5.98 ATOM 612 CB ILE 41 -4.575 45.104 -0.218 1.00 5.98 ATOM 614 CG2 ILE 41 -5.619 45.609 -1.239 1.00 5.98 ATOM 618 CG1 ILE 41 -3.887 43.816 -0.740 1.00 5.98 ATOM 621 CD1 ILE 41 -4.793 42.742 -1.356 1.00 5.98 ATOM 625 C ILE 41 -4.087 47.555 0.353 1.00 5.98 ATOM 626 O ILE 41 -4.321 48.283 -0.609 1.00 5.98 ATOM 627 N GLY 42 -4.303 47.956 1.604 1.00 7.49 ATOM 629 CA GLY 42 -4.728 49.324 1.904 1.00 7.49 ATOM 632 C GLY 42 -5.691 49.525 3.051 1.00 7.49 ATOM 633 O GLY 42 -6.109 50.665 3.219 1.00 7.49 ATOM 634 N ARG 43 -6.094 48.477 3.786 1.00 6.91 ATOM 636 CA ARG 43 -7.419 48.460 4.474 1.00 6.91 ATOM 638 CB ARG 43 -7.653 47.111 5.194 1.00 6.91 ATOM 641 CG ARG 43 -9.119 46.629 5.239 1.00 6.91 ATOM 644 CD ARG 43 -9.629 46.262 6.647 1.00 6.91 ATOM 647 NE ARG 43 -10.327 47.404 7.268 1.00 6.91 ATOM 649 CZ ARG 43 -9.770 48.503 7.737 1.00 6.91 ATOM 650 NH1 ARG 43 -10.458 49.598 7.839 1.00 6.91 ATOM 653 NH2 ARG 43 -8.519 48.563 8.078 1.00 6.91 ATOM 656 C ARG 43 -7.732 49.698 5.297 1.00 6.91 ATOM 657 O ARG 43 -8.848 50.207 5.260 1.00 6.91 ATOM 658 N SER 44 -6.689 50.169 5.955 1.00 6.49 ATOM 660 CA SER 44 -6.327 51.575 6.134 1.00 6.49 ATOM 662 CB SER 44 -7.203 52.257 7.172 1.00 6.49 ATOM 665 OG SER 44 -8.040 51.382 7.927 1.00 6.49 ATOM 667 C SER 44 -4.828 51.532 6.441 1.00 6.49 ATOM 668 O SER 44 -4.398 51.465 7.584 1.00 6.49 ATOM 669 N LYS 45 -4.029 51.276 5.399 1.00 5.33 ATOM 671 CA LYS 45 -2.571 51.073 5.487 1.00 5.33 ATOM 673 CB LYS 45 -2.035 50.659 4.089 1.00 5.33 ATOM 676 CG LYS 45 -0.508 50.445 3.951 1.00 5.33 ATOM 679 CD LYS 45 -0.129 50.132 2.494 1.00 5.33 ATOM 682 CE LYS 45 1.391 50.142 2.243 1.00 5.33 ATOM 685 NZ LYS 45 2.094 48.970 2.811 1.00 5.33 ATOM 689 C LYS 45 -1.906 52.414 5.864 1.00 5.33 ATOM 690 O LYS 45 -1.366 53.127 5.015 1.00 5.33 TER END