####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS322_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 2 - 40 4.96 8.14 LCS_AVERAGE: 85.54 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 7 - 24 1.82 10.91 LCS_AVERAGE: 31.82 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 7 - 18 0.71 11.42 LCS_AVERAGE: 18.60 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 39 3 4 5 8 9 12 13 14 15 17 20 21 22 26 29 31 35 35 38 39 LCS_GDT V 3 V 3 4 8 39 3 4 7 9 10 13 14 17 20 23 27 30 32 34 36 37 38 38 39 39 LCS_GDT Q 4 Q 4 4 8 39 3 4 5 9 10 13 14 17 20 23 26 30 32 33 36 37 38 38 39 39 LCS_GDT G 5 G 5 4 8 39 0 4 8 11 14 17 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT P 6 P 6 4 15 39 3 4 5 8 9 17 23 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT W 7 W 7 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT V 8 V 8 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT G 9 G 9 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT S 10 S 10 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT S 11 S 11 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT Y 12 Y 12 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT V 13 V 13 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT A 14 A 14 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT E 15 E 15 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT T 16 T 16 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT G 17 G 17 12 18 39 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT Q 18 Q 18 12 18 39 3 6 10 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT N 19 N 19 3 18 39 3 3 4 13 15 19 23 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT W 20 W 20 10 18 39 3 4 11 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT A 21 A 21 11 18 39 6 10 12 13 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT S 22 S 22 11 18 39 6 10 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT L 23 L 23 11 18 39 6 10 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT A 24 A 24 11 18 39 6 10 12 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT A 25 A 25 11 15 39 6 10 12 13 16 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT N 26 N 26 11 15 39 6 10 12 13 16 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT E 27 E 27 11 15 39 6 10 12 13 16 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT L 28 L 28 11 15 39 6 10 12 13 16 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT R 29 R 29 11 15 39 6 10 12 13 16 19 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT V 30 V 30 11 15 39 4 9 12 13 16 19 24 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT T 31 T 31 11 15 39 4 7 10 12 16 19 23 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT E 32 E 32 3 15 39 3 3 3 5 6 17 23 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT R 33 R 33 3 15 39 2 3 9 11 15 19 23 26 29 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT P 34 P 34 3 15 39 2 3 4 9 12 15 18 20 24 27 32 33 34 34 36 37 38 38 39 39 LCS_GDT F 35 F 35 3 15 39 2 3 4 5 14 17 23 26 26 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT W 36 W 36 6 15 39 4 4 9 11 14 17 21 26 26 29 32 33 34 34 36 37 38 38 39 39 LCS_GDT I 37 I 37 6 8 39 4 5 8 11 15 17 23 26 26 31 32 33 34 34 36 37 38 38 39 39 LCS_GDT S 38 S 38 6 8 39 4 4 6 7 10 14 18 22 25 26 29 30 34 34 36 37 38 38 39 39 LCS_GDT S 39 S 39 6 8 39 4 4 6 7 8 11 16 20 25 26 29 30 30 33 36 37 38 38 39 39 LCS_GDT F 40 F 40 6 8 39 4 4 6 7 8 11 14 18 23 26 29 30 30 31 33 37 38 38 39 39 LCS_GDT I 41 I 41 6 8 38 4 4 6 7 8 9 14 15 19 23 26 28 29 30 31 31 32 33 39 39 LCS_GDT G 42 G 42 4 8 35 3 4 4 5 8 8 12 14 16 18 21 26 27 28 30 31 32 32 33 34 LCS_GDT R 43 R 43 4 8 34 3 4 6 7 8 9 12 14 15 18 20 22 24 28 29 31 32 32 33 33 LCS_GDT S 44 S 44 3 6 14 0 3 4 4 5 8 9 9 9 10 11 13 13 15 17 22 22 25 26 30 LCS_GDT K 45 K 45 3 3 14 0 3 4 4 4 4 5 5 8 9 11 12 13 15 15 15 18 18 18 18 LCS_AVERAGE LCS_A: 45.32 ( 18.60 31.82 85.54 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 13 14 17 20 24 26 29 31 32 33 34 34 36 37 38 38 39 39 GDT PERCENT_AT 15.91 25.00 29.55 31.82 38.64 45.45 54.55 59.09 65.91 70.45 72.73 75.00 77.27 77.27 81.82 84.09 86.36 86.36 88.64 88.64 GDT RMS_LOCAL 0.25 0.50 0.83 0.97 1.45 2.05 2.48 2.64 2.96 3.24 3.35 3.46 3.75 3.71 4.15 4.40 4.62 4.62 5.04 4.96 GDT RMS_ALL_AT 12.12 11.60 11.27 11.28 10.95 10.13 9.28 9.17 8.89 8.68 8.66 8.66 8.47 8.60 8.40 8.27 8.17 8.17 8.03 8.14 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 14.578 0 0.691 0.631 16.454 0.000 0.000 - LGA V 3 V 3 8.530 0 0.151 0.800 10.536 0.000 0.000 5.858 LGA Q 4 Q 4 8.858 0 0.438 0.365 17.475 0.000 0.000 16.774 LGA G 5 G 5 3.469 0 0.182 0.182 5.509 5.909 5.909 - LGA P 6 P 6 3.507 0 0.070 0.431 5.468 18.182 11.169 5.251 LGA W 7 W 7 3.241 0 0.516 1.477 15.208 25.455 7.273 15.208 LGA V 8 V 8 3.467 0 0.149 0.196 4.038 20.455 15.584 4.038 LGA G 9 G 9 2.939 0 0.123 0.123 3.340 37.273 37.273 - LGA S 10 S 10 2.150 0 0.127 0.582 3.032 53.182 44.848 2.482 LGA S 11 S 11 1.770 0 0.099 0.803 2.608 47.727 47.273 1.487 LGA Y 12 Y 12 2.381 0 0.037 1.310 13.840 51.818 18.788 13.840 LGA V 13 V 13 0.604 0 0.055 0.156 1.772 73.636 68.052 1.772 LGA A 14 A 14 1.985 0 0.119 0.120 3.341 40.455 42.545 - LGA E 15 E 15 3.406 0 0.076 1.210 4.876 18.636 16.768 3.285 LGA T 16 T 16 3.308 0 0.044 1.347 4.423 16.364 15.584 3.540 LGA G 17 G 17 3.436 0 0.170 0.170 4.260 13.182 13.182 - LGA Q 18 Q 18 3.496 0 0.207 0.738 9.764 25.455 11.313 6.093 LGA N 19 N 19 3.932 0 0.244 1.012 7.741 17.273 8.636 5.555 LGA W 20 W 20 2.271 0 0.654 1.295 13.320 66.818 19.481 13.320 LGA A 21 A 21 2.084 0 0.341 0.369 4.054 58.636 48.000 - LGA S 22 S 22 1.088 0 0.068 0.624 2.186 73.636 63.939 2.186 LGA L 23 L 23 0.880 0 0.153 1.341 4.930 77.727 49.318 4.155 LGA A 24 A 24 0.892 0 0.037 0.069 1.625 70.000 72.364 - LGA A 25 A 25 1.374 0 0.028 0.031 2.139 59.091 60.364 - LGA N 26 N 26 1.700 0 0.034 0.575 2.813 51.364 45.000 2.011 LGA E 27 E 27 1.750 0 0.150 0.972 3.920 47.727 40.404 3.920 LGA L 28 L 28 2.051 0 0.046 1.163 3.795 38.636 41.591 1.471 LGA R 29 R 29 3.055 0 0.062 1.837 8.380 20.455 11.240 8.380 LGA V 30 V 30 3.422 0 0.239 1.081 3.988 16.364 17.403 3.988 LGA T 31 T 31 5.891 0 0.691 0.602 9.875 0.000 0.000 9.423 LGA E 32 E 32 4.796 0 0.322 1.550 9.977 3.636 1.616 9.977 LGA R 33 R 33 6.142 0 0.197 0.994 9.954 0.000 0.000 8.110 LGA P 34 P 34 8.123 0 0.639 0.621 10.961 0.000 0.000 8.905 LGA F 35 F 35 7.947 0 0.663 1.203 11.666 0.000 0.000 11.666 LGA W 36 W 36 7.590 0 0.658 1.121 13.125 0.000 0.000 11.151 LGA I 37 I 37 7.283 0 0.183 1.127 9.666 0.000 0.000 6.353 LGA S 38 S 38 11.380 0 0.095 0.109 14.258 0.000 0.000 11.094 LGA S 39 S 39 13.140 0 0.109 0.217 15.462 0.000 0.000 11.362 LGA F 40 F 40 12.354 0 0.095 1.003 15.464 0.000 0.000 12.651 LGA I 41 I 41 16.570 0 0.516 0.839 20.077 0.000 0.000 14.983 LGA G 42 G 42 20.577 0 0.072 0.072 22.841 0.000 0.000 - LGA R 43 R 43 20.562 0 0.650 1.980 26.667 0.000 0.000 24.703 LGA S 44 S 44 24.856 0 0.575 0.795 27.741 0.000 0.000 26.020 LGA K 45 K 45 25.086 0 0.472 1.605 26.055 0.000 0.000 23.139 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.679 7.797 9.160 23.843 18.975 10.234 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 26 2.64 50.000 47.648 0.950 LGA_LOCAL RMSD: 2.636 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.173 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.679 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.042812 * X + -0.851747 * Y + -0.522201 * Z + 69.506813 Y_new = -0.532729 * X + -0.461637 * Y + 0.709289 * Z + 52.176842 Z_new = -0.845202 * X + 0.247826 * Y + -0.473514 * Z + 60.348454 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.490606 1.006943 2.659420 [DEG: -85.4054 57.6936 152.3735 ] ZXZ: -2.506961 2.064073 -1.285576 [DEG: -143.6383 118.2627 -73.6581 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS322_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 26 2.64 47.648 7.68 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS322_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 17 N ALA 2 -0.545 44.406 7.322 1.00 3.88 ATOM 19 CA ALA 2 0.190 45.182 8.330 1.00 3.88 ATOM 21 CB ALA 2 -0.549 45.087 9.663 1.00 3.88 ATOM 25 C ALA 2 1.665 44.751 8.485 1.00 3.88 ATOM 26 O ALA 2 2.471 45.467 9.068 1.00 3.88 ATOM 27 N VAL 3 2.030 43.595 7.924 1.00 3.56 ATOM 29 CA VAL 3 3.375 43.007 7.959 1.00 3.56 ATOM 31 CB VAL 3 3.458 41.700 8.776 1.00 3.56 ATOM 33 CG1 VAL 3 3.927 42.037 10.188 1.00 3.56 ATOM 37 CG2 VAL 3 2.163 40.871 8.787 1.00 3.56 ATOM 41 C VAL 3 3.821 42.752 6.528 1.00 3.56 ATOM 42 O VAL 3 3.450 41.760 5.899 1.00 3.56 ATOM 43 N GLN 4 4.545 43.721 5.976 1.00 2.75 ATOM 45 CA GLN 4 4.591 43.943 4.534 1.00 2.75 ATOM 47 CB GLN 4 4.505 45.452 4.242 1.00 2.75 ATOM 50 CG GLN 4 3.135 45.969 4.729 1.00 2.75 ATOM 53 CD GLN 4 2.846 47.434 4.435 1.00 2.75 ATOM 54 OE1 GLN 4 3.675 48.205 3.987 1.00 2.75 ATOM 55 NE2 GLN 4 1.632 47.865 4.690 1.00 2.75 ATOM 58 C GLN 4 5.731 43.185 3.830 1.00 2.75 ATOM 59 O GLN 4 6.586 43.763 3.165 1.00 2.75 ATOM 60 N GLY 5 5.707 41.857 3.963 1.00 3.10 ATOM 62 CA GLY 5 6.529 40.932 3.187 1.00 3.10 ATOM 65 C GLY 5 6.069 39.472 3.370 1.00 3.10 ATOM 66 O GLY 5 6.016 39.009 4.513 1.00 3.10 ATOM 67 N PRO 6 5.787 38.708 2.286 1.00 2.90 ATOM 68 CD PRO 6 5.706 39.178 0.908 1.00 2.90 ATOM 71 CG PRO 6 4.982 38.081 0.125 1.00 2.90 ATOM 74 CB PRO 6 5.364 36.810 0.877 1.00 2.90 ATOM 77 CA PRO 6 5.416 37.280 2.333 1.00 2.90 ATOM 79 C PRO 6 6.330 36.370 3.186 1.00 2.90 ATOM 80 O PRO 6 5.905 35.314 3.673 1.00 2.90 ATOM 81 N TRP 7 7.575 36.804 3.418 1.00 2.97 ATOM 83 CA TRP 7 8.495 36.230 4.400 1.00 2.97 ATOM 85 CB TRP 7 9.714 37.164 4.539 1.00 2.97 ATOM 88 CG TRP 7 10.440 37.057 5.844 1.00 2.97 ATOM 89 CD1 TRP 7 11.047 35.944 6.313 1.00 2.97 ATOM 91 NE1 TRP 7 11.418 36.138 7.628 1.00 2.97 ATOM 93 CE2 TRP 7 11.097 37.403 8.068 1.00 2.97 ATOM 94 CZ2 TRP 7 11.215 38.042 9.309 1.00 2.97 ATOM 96 CH2 TRP 7 10.784 39.373 9.434 1.00 2.97 ATOM 98 CZ3 TRP 7 10.250 40.045 8.320 1.00 2.97 ATOM 100 CE3 TRP 7 10.112 39.383 7.083 1.00 2.97 ATOM 102 CD2 TRP 7 10.518 38.038 6.928 1.00 2.97 ATOM 103 C TRP 7 7.844 35.944 5.770 1.00 2.97 ATOM 104 O TRP 7 7.969 34.822 6.264 1.00 2.97 ATOM 105 N VAL 8 7.121 36.910 6.355 1.00 3.11 ATOM 107 CA VAL 8 6.551 36.807 7.714 1.00 3.11 ATOM 109 CB VAL 8 5.836 38.123 8.101 1.00 3.11 ATOM 111 CG1 VAL 8 5.240 38.066 9.511 1.00 3.11 ATOM 115 CG2 VAL 8 6.805 39.312 8.061 1.00 3.11 ATOM 119 C VAL 8 5.614 35.594 7.814 1.00 3.11 ATOM 120 O VAL 8 5.826 34.688 8.622 1.00 3.11 ATOM 121 N GLY 9 4.631 35.527 6.909 1.00 2.20 ATOM 123 CA GLY 9 3.749 34.368 6.787 1.00 2.20 ATOM 126 C GLY 9 4.491 33.063 6.500 1.00 2.20 ATOM 127 O GLY 9 4.109 32.045 7.057 1.00 2.20 ATOM 128 N SER 10 5.555 33.059 5.689 1.00 1.84 ATOM 130 CA SER 10 6.255 31.797 5.378 1.00 1.84 ATOM 132 CB SER 10 7.272 32.021 4.251 1.00 1.84 ATOM 135 OG SER 10 6.672 32.621 3.115 1.00 1.84 ATOM 137 C SER 10 6.974 31.194 6.595 1.00 1.84 ATOM 138 O SER 10 6.806 30.013 6.922 1.00 1.84 ATOM 139 N SER 11 7.763 32.032 7.271 1.00 1.36 ATOM 141 CA SER 11 8.568 31.654 8.443 1.00 1.36 ATOM 143 CB SER 11 9.423 32.833 8.937 1.00 1.36 ATOM 146 OG SER 11 9.965 33.550 7.837 1.00 1.36 ATOM 148 C SER 11 7.645 31.192 9.558 1.00 1.36 ATOM 149 O SER 11 7.705 30.042 9.987 1.00 1.36 ATOM 150 N TYR 12 6.673 32.031 9.925 1.00 1.33 ATOM 152 CA TYR 12 5.857 31.699 11.084 1.00 1.33 ATOM 154 CB TYR 12 5.378 33.000 11.741 1.00 1.33 ATOM 157 CG TYR 12 6.510 33.928 12.162 1.00 1.33 ATOM 158 CD1 TYR 12 6.600 35.243 11.660 1.00 1.33 ATOM 160 CE1 TYR 12 7.697 36.060 12.003 1.00 1.33 ATOM 162 CZ TYR 12 8.712 35.558 12.846 1.00 1.33 ATOM 163 OH TYR 12 9.791 36.324 13.157 1.00 1.33 ATOM 165 CE2 TYR 12 8.612 34.252 13.361 1.00 1.33 ATOM 167 CD2 TYR 12 7.507 33.451 13.033 1.00 1.33 ATOM 169 C TYR 12 4.787 30.617 10.795 1.00 1.33 ATOM 170 O TYR 12 4.422 29.897 11.723 1.00 1.33 ATOM 171 N VAL 13 4.398 30.355 9.527 1.00 1.59 ATOM 173 CA VAL 13 3.780 29.054 9.173 1.00 1.59 ATOM 175 CB VAL 13 3.415 28.900 7.674 1.00 1.59 ATOM 177 CG1 VAL 13 3.151 27.446 7.241 1.00 1.59 ATOM 181 CG2 VAL 13 2.123 29.635 7.362 1.00 1.59 ATOM 185 C VAL 13 4.732 27.921 9.537 1.00 1.59 ATOM 186 O VAL 13 4.338 27.035 10.293 1.00 1.59 ATOM 187 N ALA 14 5.966 27.925 9.020 1.00 2.19 ATOM 189 CA ALA 14 6.906 26.834 9.285 1.00 2.19 ATOM 191 CB ALA 14 8.177 27.068 8.458 1.00 2.19 ATOM 195 C ALA 14 7.233 26.615 10.780 1.00 2.19 ATOM 196 O ALA 14 7.677 25.527 11.149 1.00 2.19 ATOM 197 N GLU 15 6.979 27.615 11.627 1.00 2.40 ATOM 199 CA GLU 15 7.155 27.568 13.082 1.00 2.40 ATOM 201 CB GLU 15 7.751 28.918 13.539 1.00 2.40 ATOM 204 CG GLU 15 9.173 29.169 12.986 1.00 2.40 ATOM 207 CD GLU 15 9.589 30.649 13.049 1.00 2.40 ATOM 208 OE1 GLU 15 9.754 31.266 11.969 1.00 2.40 ATOM 209 OE2 GLU 15 9.748 31.171 14.178 1.00 2.40 ATOM 210 C GLU 15 5.867 27.217 13.873 1.00 2.40 ATOM 211 O GLU 15 6.011 26.698 14.979 1.00 2.40 ATOM 212 N THR 16 4.636 27.391 13.338 1.00 2.21 ATOM 214 CA THR 16 3.378 27.152 14.117 1.00 2.21 ATOM 216 CB THR 16 2.665 28.482 14.498 1.00 2.21 ATOM 218 CG2 THR 16 1.211 28.609 14.038 1.00 2.21 ATOM 222 OG1 THR 16 2.628 28.624 15.901 1.00 2.21 ATOM 224 C THR 16 2.435 26.083 13.520 1.00 2.21 ATOM 225 O THR 16 1.604 25.501 14.215 1.00 2.21 ATOM 226 N GLY 17 2.588 25.726 12.242 1.00 2.10 ATOM 228 CA GLY 17 2.149 24.438 11.681 1.00 2.10 ATOM 231 C GLY 17 0.781 24.379 10.989 1.00 2.10 ATOM 232 O GLY 17 0.594 23.565 10.085 1.00 2.10 ATOM 233 N GLN 18 -0.189 25.188 11.418 1.00 2.30 ATOM 235 CA GLN 18 -1.592 25.166 10.965 1.00 2.30 ATOM 237 CB GLN 18 -2.245 23.815 11.394 1.00 2.30 ATOM 240 CG GLN 18 -2.676 22.914 10.216 1.00 2.30 ATOM 243 CD GLN 18 -3.861 23.442 9.409 1.00 2.30 ATOM 244 OE1 GLN 18 -4.259 24.590 9.508 1.00 2.30 ATOM 245 NE2 GLN 18 -4.476 22.637 8.571 1.00 2.30 ATOM 248 C GLN 18 -2.334 26.379 11.570 1.00 2.30 ATOM 249 O GLN 18 -1.705 27.299 12.085 1.00 2.30 ATOM 250 N ASN 19 -3.672 26.396 11.519 1.00 2.43 ATOM 252 CA ASN 19 -4.568 27.364 12.176 1.00 2.43 ATOM 254 CB ASN 19 -4.457 27.201 13.706 1.00 2.43 ATOM 257 CG ASN 19 -4.715 25.783 14.178 1.00 2.43 ATOM 258 OD1 ASN 19 -5.653 25.129 13.761 1.00 2.43 ATOM 259 ND2 ASN 19 -3.884 25.247 15.041 1.00 2.43 ATOM 262 C ASN 19 -4.364 28.826 11.731 1.00 2.43 ATOM 263 O ASN 19 -4.847 29.760 12.372 1.00 2.43 ATOM 264 N TRP 20 -3.636 29.002 10.621 1.00 1.88 ATOM 266 CA TRP 20 -2.751 30.142 10.396 1.00 1.88 ATOM 268 CB TRP 20 -1.979 29.898 9.083 1.00 1.88 ATOM 271 CG TRP 20 -0.831 30.828 8.861 1.00 1.88 ATOM 272 CD1 TRP 20 -0.556 31.529 7.740 1.00 1.88 ATOM 274 NE1 TRP 20 0.470 32.418 7.985 1.00 1.88 ATOM 276 CE2 TRP 20 0.947 32.286 9.274 1.00 1.88 ATOM 277 CZ2 TRP 20 1.902 32.976 10.031 1.00 1.88 ATOM 279 CH2 TRP 20 2.181 32.519 11.329 1.00 1.88 ATOM 281 CZ3 TRP 20 1.607 31.336 11.807 1.00 1.88 ATOM 283 CE3 TRP 20 0.643 30.658 11.044 1.00 1.88 ATOM 285 CD2 TRP 20 0.232 31.167 9.796 1.00 1.88 ATOM 286 C TRP 20 -3.444 31.514 10.444 1.00 1.88 ATOM 287 O TRP 20 -2.809 32.489 10.795 1.00 1.88 ATOM 288 N ALA 21 -4.745 31.597 10.147 1.00 1.20 ATOM 290 CA ALA 21 -5.575 32.804 10.139 1.00 1.20 ATOM 292 CB ALA 21 -7.007 32.362 9.785 1.00 1.20 ATOM 296 C ALA 21 -5.477 33.735 11.384 1.00 1.20 ATOM 297 O ALA 21 -4.482 34.433 11.621 1.00 1.20 ATOM 298 N SER 22 -6.554 33.826 12.164 1.00 1.47 ATOM 300 CA SER 22 -6.575 34.671 13.360 1.00 1.47 ATOM 302 CB SER 22 -7.994 34.759 13.924 1.00 1.47 ATOM 305 OG SER 22 -8.843 35.267 12.914 1.00 1.47 ATOM 307 C SER 22 -5.573 34.210 14.420 1.00 1.47 ATOM 308 O SER 22 -5.084 35.034 15.190 1.00 1.47 ATOM 309 N LEU 23 -5.187 32.925 14.431 1.00 1.39 ATOM 311 CA LEU 23 -4.122 32.461 15.319 1.00 1.39 ATOM 313 CB LEU 23 -3.963 30.930 15.273 1.00 1.39 ATOM 316 CG LEU 23 -3.361 30.399 16.590 1.00 1.39 ATOM 318 CD1 LEU 23 -4.418 30.322 17.701 1.00 1.39 ATOM 322 CD2 LEU 23 -2.798 28.991 16.411 1.00 1.39 ATOM 326 C LEU 23 -2.810 33.199 15.017 1.00 1.39 ATOM 327 O LEU 23 -2.339 33.899 15.913 1.00 1.39 ATOM 328 N ALA 24 -2.316 33.211 13.764 1.00 1.11 ATOM 330 CA ALA 24 -1.088 33.953 13.485 1.00 1.11 ATOM 332 CB ALA 24 -0.632 33.782 12.055 1.00 1.11 ATOM 336 C ALA 24 -1.260 35.449 13.668 1.00 1.11 ATOM 337 O ALA 24 -0.321 36.120 14.085 1.00 1.11 ATOM 338 N ALA 25 -2.442 35.987 13.340 1.00 0.99 ATOM 340 CA ALA 25 -2.682 37.410 13.529 1.00 0.99 ATOM 342 CB ALA 25 -4.133 37.721 13.151 1.00 0.99 ATOM 346 C ALA 25 -2.421 37.837 14.981 1.00 0.99 ATOM 347 O ALA 25 -1.812 38.879 15.250 1.00 0.99 ATOM 348 N ASN 26 -2.857 36.986 15.912 1.00 0.98 ATOM 350 CA ASN 26 -2.708 37.243 17.327 1.00 0.98 ATOM 352 CB ASN 26 -3.876 36.576 18.069 1.00 0.98 ATOM 355 CG ASN 26 -5.127 37.406 17.823 1.00 0.98 ATOM 356 OD1 ASN 26 -5.297 38.460 18.425 1.00 0.98 ATOM 357 ND2 ASN 26 -5.953 37.006 16.894 1.00 0.98 ATOM 360 C ASN 26 -1.308 36.902 17.861 1.00 0.98 ATOM 361 O ASN 26 -0.765 37.713 18.614 1.00 0.98 ATOM 362 N GLU 27 -0.688 35.798 17.445 1.00 1.23 ATOM 364 CA GLU 27 0.706 35.452 17.769 1.00 1.23 ATOM 366 CB GLU 27 1.099 34.151 17.034 1.00 1.23 ATOM 369 CG GLU 27 0.429 32.883 17.589 1.00 1.23 ATOM 372 CD GLU 27 0.589 31.691 16.626 1.00 1.23 ATOM 373 OE1 GLU 27 1.630 31.001 16.691 1.00 1.23 ATOM 374 OE2 GLU 27 -0.334 31.466 15.811 1.00 1.23 ATOM 375 C GLU 27 1.672 36.584 17.382 1.00 1.23 ATOM 376 O GLU 27 2.429 37.082 18.215 1.00 1.23 ATOM 377 N LEU 28 1.575 37.053 16.136 1.00 1.40 ATOM 379 CA LEU 28 2.398 38.120 15.567 1.00 1.40 ATOM 381 CB LEU 28 2.384 38.007 14.026 1.00 1.40 ATOM 384 CG LEU 28 3.243 36.895 13.384 1.00 1.40 ATOM 386 CD1 LEU 28 3.199 35.520 14.051 1.00 1.40 ATOM 390 CD2 LEU 28 2.777 36.701 11.938 1.00 1.40 ATOM 394 C LEU 28 1.965 39.517 16.051 1.00 1.40 ATOM 395 O LEU 28 2.600 40.497 15.667 1.00 1.40 ATOM 396 N ARG 29 0.906 39.638 16.879 1.00 1.71 ATOM 398 CA ARG 29 0.300 40.925 17.300 1.00 1.71 ATOM 400 CB ARG 29 1.195 41.591 18.374 1.00 1.71 ATOM 403 CG ARG 29 1.362 40.816 19.689 1.00 1.71 ATOM 406 CD ARG 29 0.137 40.930 20.609 1.00 1.71 ATOM 409 NE ARG 29 -0.944 40.011 20.217 1.00 1.71 ATOM 411 CZ ARG 29 -2.191 40.289 19.887 1.00 1.71 ATOM 412 NH1 ARG 29 -3.023 39.307 19.747 1.00 1.71 ATOM 415 NH2 ARG 29 -2.621 41.494 19.653 1.00 1.71 ATOM 418 C ARG 29 -0.027 41.901 16.155 1.00 1.71 ATOM 419 O ARG 29 -0.154 43.100 16.396 1.00 1.71 ATOM 420 N VAL 30 -0.157 41.407 14.927 1.00 1.69 ATOM 422 CA VAL 30 -0.454 42.241 13.753 1.00 1.69 ATOM 424 CB VAL 30 -0.071 41.521 12.450 1.00 1.69 ATOM 426 CG1 VAL 30 1.448 41.438 12.363 1.00 1.69 ATOM 430 CG2 VAL 30 -0.638 40.110 12.329 1.00 1.69 ATOM 434 C VAL 30 -1.919 42.689 13.777 1.00 1.69 ATOM 435 O VAL 30 -2.698 42.301 14.649 1.00 1.69 ATOM 436 N THR 31 -2.348 43.500 12.806 1.00 2.16 ATOM 438 CA THR 31 -3.790 43.661 12.575 1.00 2.16 ATOM 440 CB THR 31 -4.093 44.584 11.388 1.00 2.16 ATOM 442 CG2 THR 31 -3.581 46.010 11.580 1.00 2.16 ATOM 446 OG1 THR 31 -3.530 44.054 10.213 1.00 2.16 ATOM 448 C THR 31 -4.421 42.300 12.285 1.00 2.16 ATOM 449 O THR 31 -3.820 41.524 11.547 1.00 2.16 ATOM 450 N GLU 32 -5.638 42.057 12.785 1.00 1.98 ATOM 452 CA GLU 32 -6.503 40.891 12.517 1.00 1.98 ATOM 454 CB GLU 32 -7.651 40.932 13.548 1.00 1.98 ATOM 457 CG GLU 32 -8.587 39.714 13.540 1.00 1.98 ATOM 460 CD GLU 32 -7.801 38.407 13.653 1.00 1.98 ATOM 461 OE1 GLU 32 -7.182 38.195 14.716 1.00 1.98 ATOM 462 OE2 GLU 32 -7.782 37.649 12.656 1.00 1.98 ATOM 463 C GLU 32 -7.013 40.836 11.059 1.00 1.98 ATOM 464 O GLU 32 -8.173 41.124 10.761 1.00 1.98 ATOM 465 N ARG 33 -6.106 40.626 10.104 1.00 2.11 ATOM 467 CA ARG 33 -6.285 40.841 8.664 1.00 2.11 ATOM 469 CB ARG 33 -5.928 42.299 8.281 1.00 2.11 ATOM 472 CG ARG 33 -6.810 43.399 8.898 1.00 2.11 ATOM 475 CD ARG 33 -8.271 43.336 8.426 1.00 2.11 ATOM 478 NE ARG 33 -9.088 44.402 9.039 1.00 2.11 ATOM 480 CZ ARG 33 -9.834 44.308 10.129 1.00 2.11 ATOM 481 NH1 ARG 33 -10.531 45.332 10.527 1.00 2.11 ATOM 484 NH2 ARG 33 -9.911 43.233 10.855 1.00 2.11 ATOM 487 C ARG 33 -5.437 39.832 7.887 1.00 2.11 ATOM 488 O ARG 33 -4.320 40.207 7.563 1.00 2.11 ATOM 489 N PRO 34 -5.940 38.598 7.620 1.00 3.43 ATOM 490 CD PRO 34 -7.242 38.160 8.132 1.00 3.43 ATOM 493 CG PRO 34 -7.244 36.638 8.116 1.00 3.43 ATOM 496 CB PRO 34 -6.345 36.335 6.930 1.00 3.43 ATOM 499 CA PRO 34 -5.266 37.423 7.012 1.00 3.43 ATOM 501 C PRO 34 -4.477 37.513 5.679 1.00 3.43 ATOM 502 O PRO 34 -4.318 36.502 5.001 1.00 3.43 ATOM 503 N PHE 35 -3.953 38.664 5.263 1.00 2.34 ATOM 505 CA PHE 35 -3.261 38.857 3.996 1.00 2.34 ATOM 507 CB PHE 35 -3.208 40.347 3.645 1.00 2.34 ATOM 510 CG PHE 35 -3.339 40.630 2.160 1.00 2.34 ATOM 511 CD1 PHE 35 -4.617 40.761 1.582 1.00 2.34 ATOM 513 CE1 PHE 35 -4.748 41.059 0.215 1.00 2.34 ATOM 515 CZ PHE 35 -3.603 41.202 -0.588 1.00 2.34 ATOM 517 CE2 PHE 35 -2.326 41.057 -0.019 1.00 2.34 ATOM 519 CD2 PHE 35 -2.193 40.776 1.354 1.00 2.34 ATOM 521 C PHE 35 -1.872 38.201 3.903 1.00 2.34 ATOM 522 O PHE 35 -1.443 37.830 2.808 1.00 2.34 ATOM 523 N TRP 36 -1.168 37.979 5.020 1.00 1.66 ATOM 525 CA TRP 36 0.048 37.145 5.002 1.00 1.66 ATOM 527 CB TRP 36 0.922 37.408 6.239 1.00 1.66 ATOM 530 CG TRP 36 0.300 36.979 7.526 1.00 1.66 ATOM 531 CD1 TRP 36 0.427 35.767 8.107 1.00 1.66 ATOM 533 NE1 TRP 36 -0.437 35.670 9.179 1.00 1.66 ATOM 535 CE2 TRP 36 -1.185 36.816 9.318 1.00 1.66 ATOM 536 CZ2 TRP 36 -2.257 37.169 10.141 1.00 1.66 ATOM 538 CH2 TRP 36 -2.732 38.492 10.109 1.00 1.66 ATOM 540 CZ3 TRP 36 -2.136 39.429 9.250 1.00 1.66 ATOM 542 CE3 TRP 36 -1.133 39.035 8.350 1.00 1.66 ATOM 544 CD2 TRP 36 -0.645 37.715 8.353 1.00 1.66 ATOM 545 C TRP 36 -0.278 35.647 4.864 1.00 1.66 ATOM 546 O TRP 36 0.537 34.907 4.309 1.00 1.66 ATOM 547 N ILE 37 -1.469 35.196 5.299 1.00 1.57 ATOM 549 CA ILE 37 -1.937 33.837 4.978 1.00 1.57 ATOM 551 CB ILE 37 -3.063 33.276 5.901 1.00 1.57 ATOM 553 CG2 ILE 37 -3.020 33.924 7.298 1.00 1.57 ATOM 557 CG1 ILE 37 -4.495 33.185 5.317 1.00 1.57 ATOM 560 CD1 ILE 37 -5.491 32.433 6.208 1.00 1.57 ATOM 564 C ILE 37 -2.263 33.785 3.499 1.00 1.57 ATOM 565 O ILE 37 -1.670 32.969 2.815 1.00 1.57 ATOM 566 N SER 38 -3.115 34.670 2.971 1.00 1.61 ATOM 568 CA SER 38 -3.525 34.580 1.566 1.00 1.61 ATOM 570 CB SER 38 -4.657 35.554 1.233 1.00 1.61 ATOM 573 OG SER 38 -4.234 36.897 1.318 1.00 1.61 ATOM 575 C SER 38 -2.341 34.698 0.606 1.00 1.61 ATOM 576 O SER 38 -2.328 33.992 -0.393 1.00 1.61 ATOM 577 N SER 39 -1.327 35.519 0.904 1.00 1.64 ATOM 579 CA SER 39 -0.064 35.550 0.144 1.00 1.64 ATOM 581 CB SER 39 0.705 36.858 0.358 1.00 1.64 ATOM 584 OG SER 39 0.953 37.115 1.722 1.00 1.64 ATOM 586 C SER 39 0.853 34.345 0.355 1.00 1.64 ATOM 587 O SER 39 1.557 33.976 -0.584 1.00 1.64 ATOM 588 N PHE 40 0.831 33.660 1.506 1.00 1.49 ATOM 590 CA PHE 40 1.467 32.335 1.579 1.00 1.49 ATOM 592 CB PHE 40 1.591 31.876 3.038 1.00 1.49 ATOM 595 CG PHE 40 2.389 30.594 3.185 1.00 1.49 ATOM 596 CD1 PHE 40 3.788 30.622 3.029 1.00 1.49 ATOM 598 CE1 PHE 40 4.544 29.444 3.173 1.00 1.49 ATOM 600 CZ PHE 40 3.901 28.229 3.467 1.00 1.49 ATOM 602 CE2 PHE 40 2.501 28.191 3.591 1.00 1.49 ATOM 604 CD2 PHE 40 1.745 29.370 3.449 1.00 1.49 ATOM 606 C PHE 40 0.765 31.285 0.734 1.00 1.49 ATOM 607 O PHE 40 1.438 30.575 -0.006 1.00 1.49 ATOM 608 N ILE 41 -0.570 31.201 0.773 1.00 1.85 ATOM 610 CA ILE 41 -1.293 30.235 -0.052 1.00 1.85 ATOM 612 CB ILE 41 -2.738 29.937 0.439 1.00 1.85 ATOM 614 CG2 ILE 41 -2.843 28.403 0.566 1.00 1.85 ATOM 618 CG1 ILE 41 -3.250 30.509 1.779 1.00 1.85 ATOM 621 CD1 ILE 41 -2.559 30.056 3.079 1.00 1.85 ATOM 625 C ILE 41 -0.955 30.539 -1.499 1.00 1.85 ATOM 626 O ILE 41 -0.248 29.731 -2.095 1.00 1.85 ATOM 627 N GLY 42 -1.179 31.773 -1.959 1.00 1.93 ATOM 629 CA GLY 42 -0.764 32.393 -3.232 1.00 1.93 ATOM 632 C GLY 42 0.712 32.418 -3.639 1.00 1.93 ATOM 633 O GLY 42 0.996 32.740 -4.800 1.00 1.93 ATOM 634 N ARG 43 1.631 31.918 -2.783 1.00 1.84 ATOM 636 CA ARG 43 2.898 31.341 -3.277 1.00 1.84 ATOM 638 CB ARG 43 3.697 30.696 -2.127 1.00 1.84 ATOM 641 CG ARG 43 4.893 29.800 -2.497 1.00 1.84 ATOM 644 CD ARG 43 4.601 28.295 -2.307 1.00 1.84 ATOM 647 NE ARG 43 3.428 27.799 -3.070 1.00 1.84 ATOM 649 CZ ARG 43 2.225 27.494 -2.606 1.00 1.84 ATOM 650 NH1 ARG 43 1.315 27.021 -3.405 1.00 1.84 ATOM 653 NH2 ARG 43 1.856 27.692 -1.376 1.00 1.84 ATOM 656 C ARG 43 2.628 30.388 -4.469 1.00 1.84 ATOM 657 O ARG 43 3.512 30.190 -5.291 1.00 1.84 ATOM 658 N SER 44 1.409 29.823 -4.559 1.00 4.73 ATOM 660 CA SER 44 0.691 29.495 -5.815 1.00 4.73 ATOM 662 CB SER 44 1.546 28.608 -6.754 1.00 4.73 ATOM 665 OG SER 44 2.036 27.429 -6.120 1.00 4.73 ATOM 667 C SER 44 -0.716 28.876 -5.665 1.00 4.73 ATOM 668 O SER 44 -1.181 28.115 -6.505 1.00 4.73 ATOM 669 N LYS 45 -1.371 29.134 -4.541 1.00 3.61 ATOM 671 CA LYS 45 -2.552 28.470 -3.974 1.00 3.61 ATOM 673 CB LYS 45 -2.183 27.167 -3.230 1.00 3.61 ATOM 676 CG LYS 45 -3.249 26.040 -3.202 1.00 3.61 ATOM 679 CD LYS 45 -4.496 26.212 -2.311 1.00 3.61 ATOM 682 CE LYS 45 -5.638 26.961 -3.009 1.00 3.61 ATOM 685 NZ LYS 45 -6.442 27.742 -2.046 1.00 3.61 ATOM 689 C LYS 45 -3.462 29.459 -3.290 1.00 3.61 ATOM 690 O LYS 45 -3.873 29.189 -2.182 1.00 3.61 TER END