####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS322_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 4 - 25 4.68 10.29 LONGEST_CONTINUOUS_SEGMENT: 22 5 - 26 4.74 10.00 LCS_AVERAGE: 44.11 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 8 - 21 1.78 12.45 LCS_AVERAGE: 22.47 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 9 - 18 0.64 13.98 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.90 13.49 LCS_AVERAGE: 15.55 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 12 3 3 5 5 7 13 14 15 17 19 21 23 24 25 27 28 30 31 34 34 LCS_GDT V 3 V 3 5 6 19 3 4 7 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT Q 4 Q 4 5 6 22 3 4 7 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT G 5 G 5 5 6 22 0 3 5 6 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT P 6 P 6 5 6 22 3 4 5 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT W 7 W 7 5 6 22 3 4 5 6 8 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT V 8 V 8 3 14 22 3 3 7 12 13 13 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT G 9 G 9 10 14 22 7 8 10 10 10 13 14 15 17 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT S 10 S 10 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 27 29 30 31 33 34 36 36 LCS_GDT S 11 S 11 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 26 27 29 31 33 34 36 36 LCS_GDT Y 12 Y 12 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 27 29 30 31 33 34 36 36 LCS_GDT V 13 V 13 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 27 29 30 31 33 34 36 36 LCS_GDT A 14 A 14 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 26 27 28 31 33 34 36 36 LCS_GDT E 15 E 15 10 14 22 7 9 10 12 13 13 14 16 17 20 22 24 26 27 28 29 31 34 36 36 LCS_GDT T 16 T 16 10 14 22 7 9 10 12 13 13 14 16 18 20 22 24 26 27 28 31 33 34 36 36 LCS_GDT G 17 G 17 10 14 22 4 9 10 12 13 13 14 16 18 20 22 24 26 29 30 31 33 34 36 36 LCS_GDT Q 18 Q 18 10 14 22 4 9 10 12 13 13 14 16 18 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT N 19 N 19 5 14 22 3 5 7 12 13 13 14 16 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT W 20 W 20 10 14 22 7 8 10 12 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT A 21 A 21 10 14 22 7 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT S 22 S 22 10 12 22 7 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT L 23 L 23 10 12 22 7 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT A 24 A 24 10 12 22 7 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT A 25 A 25 10 12 22 7 8 10 10 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT N 26 N 26 10 12 22 7 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT E 27 E 27 10 12 20 3 8 10 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT L 28 L 28 10 12 18 3 8 10 10 11 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT R 29 R 29 10 12 18 3 6 10 10 11 13 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT V 30 V 30 4 12 18 3 4 4 8 11 11 12 15 17 19 22 24 27 29 30 31 33 34 36 36 LCS_GDT T 31 T 31 3 7 18 3 3 4 6 8 12 14 16 18 20 22 24 26 27 28 30 33 34 36 36 LCS_GDT E 32 E 32 3 7 18 3 3 4 6 8 10 12 13 15 20 20 23 26 27 28 29 30 32 33 35 LCS_GDT R 33 R 33 3 7 18 1 3 4 6 8 10 12 13 15 15 15 19 20 20 21 27 30 31 32 33 LCS_GDT P 34 P 34 3 7 18 2 3 3 5 6 7 8 10 13 14 15 19 20 20 20 25 30 31 32 33 LCS_GDT F 35 F 35 3 7 18 3 3 3 4 11 11 11 12 13 18 21 23 24 27 28 29 33 34 36 36 LCS_GDT W 36 W 36 6 7 18 4 4 6 7 8 11 14 16 18 20 23 24 27 29 30 31 33 34 36 36 LCS_GDT I 37 I 37 6 7 15 4 4 6 10 10 12 15 17 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT S 38 S 38 6 7 15 4 4 7 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT S 39 S 39 6 7 15 4 4 6 11 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 LCS_GDT F 40 F 40 6 7 15 4 4 6 7 8 9 10 11 15 19 22 24 27 29 30 31 33 34 36 36 LCS_GDT I 41 I 41 6 7 15 4 4 6 7 8 9 10 14 18 19 22 24 27 29 30 31 33 34 36 36 LCS_GDT G 42 G 42 4 7 15 3 3 4 7 8 8 9 11 14 17 21 24 26 27 28 29 31 32 34 34 LCS_GDT R 43 R 43 3 4 15 3 3 4 4 4 6 7 9 10 14 17 22 26 27 28 29 30 32 33 34 LCS_GDT S 44 S 44 3 4 15 3 3 4 4 4 7 9 9 12 17 20 24 26 27 28 29 30 32 33 34 LCS_GDT K 45 K 45 0 3 15 0 0 0 3 3 6 7 8 9 11 14 15 15 16 17 20 24 26 30 32 LCS_AVERAGE LCS_A: 27.38 ( 15.55 22.47 44.11 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 12 13 15 16 18 19 22 23 24 27 29 30 31 33 34 36 36 GDT PERCENT_AT 15.91 20.45 22.73 27.27 29.55 34.09 36.36 40.91 43.18 50.00 52.27 54.55 61.36 65.91 68.18 70.45 75.00 77.27 81.82 81.82 GDT RMS_LOCAL 0.17 0.53 0.64 1.43 1.46 1.77 1.96 2.35 2.56 3.46 3.56 3.71 4.32 4.78 4.99 5.20 5.67 5.75 6.06 6.06 GDT RMS_ALL_AT 14.57 13.74 13.98 12.86 10.96 10.83 10.79 10.53 10.55 9.98 10.00 9.97 9.56 9.22 9.08 8.92 8.56 8.60 8.52 8.52 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.477 0 0.390 0.440 7.408 2.727 2.545 - LGA V 3 V 3 2.103 0 0.047 0.138 3.051 50.909 49.351 2.438 LGA Q 4 Q 4 1.840 0 0.380 0.460 2.710 41.818 38.788 2.652 LGA G 5 G 5 2.606 0 0.320 0.320 4.403 24.545 24.545 - LGA P 6 P 6 1.506 0 0.318 0.312 2.647 63.636 52.987 2.255 LGA W 7 W 7 2.772 0 0.358 0.577 8.259 20.909 6.234 7.684 LGA V 8 V 8 4.068 0 0.301 0.986 7.481 8.182 10.390 3.576 LGA G 9 G 9 8.499 0 0.530 0.530 9.977 0.000 0.000 - LGA S 10 S 10 13.847 0 0.058 0.764 15.879 0.000 0.000 15.879 LGA S 11 S 11 15.554 0 0.061 0.715 18.610 0.000 0.000 18.610 LGA Y 12 Y 12 11.790 0 0.070 0.761 12.885 0.000 0.000 8.028 LGA V 13 V 13 11.937 0 0.054 0.080 14.990 0.000 0.000 13.103 LGA A 14 A 14 19.038 0 0.024 0.036 21.532 0.000 0.000 - LGA E 15 E 15 20.281 0 0.026 0.937 24.698 0.000 0.000 23.835 LGA T 16 T 16 16.761 0 0.164 0.182 17.348 0.000 0.000 12.626 LGA G 17 G 17 15.972 0 0.195 0.195 16.261 0.000 0.000 - LGA Q 18 Q 18 9.056 0 0.406 0.572 12.053 0.000 0.000 8.863 LGA N 19 N 19 7.249 0 0.062 1.080 12.170 0.455 0.227 12.170 LGA W 20 W 20 0.767 0 0.626 1.349 11.213 68.182 23.377 11.213 LGA A 21 A 21 1.678 0 0.028 0.029 2.552 54.545 49.091 - LGA S 22 S 22 1.989 0 0.039 0.088 2.702 50.909 43.030 2.562 LGA L 23 L 23 1.019 0 0.198 0.260 1.818 69.545 62.045 1.818 LGA A 24 A 24 1.099 0 0.030 0.039 2.028 74.091 66.909 - LGA A 25 A 25 2.045 0 0.024 0.049 3.040 51.364 44.727 - LGA N 26 N 26 2.121 0 0.070 0.351 5.610 47.727 27.500 4.260 LGA E 27 E 27 2.340 0 0.141 1.129 5.306 38.636 24.646 2.980 LGA L 28 L 28 3.136 0 0.125 0.945 8.090 25.455 12.955 8.090 LGA R 29 R 29 3.940 0 0.209 1.163 6.810 12.273 11.901 5.354 LGA V 30 V 30 9.122 0 0.612 0.572 12.465 0.000 0.000 12.465 LGA T 31 T 31 15.154 0 0.135 1.069 18.803 0.000 0.000 16.239 LGA E 32 E 32 17.450 0 0.057 1.519 20.351 0.000 0.000 20.351 LGA R 33 R 33 17.169 0 0.309 1.364 18.970 0.000 0.000 15.973 LGA P 34 P 34 13.042 0 0.146 0.402 17.564 0.000 0.000 16.760 LGA F 35 F 35 6.575 0 0.614 0.423 8.584 0.000 18.347 3.187 LGA W 36 W 36 6.034 0 0.650 0.628 12.251 1.364 0.390 12.251 LGA I 37 I 37 5.249 0 0.051 0.644 9.469 7.273 3.636 9.469 LGA S 38 S 38 1.063 0 0.176 0.610 4.866 43.182 32.121 4.866 LGA S 39 S 39 2.815 0 0.132 0.223 5.910 20.909 28.788 1.868 LGA F 40 F 40 5.969 0 0.039 1.040 13.539 1.364 0.496 13.539 LGA I 41 I 41 6.071 0 0.567 1.268 9.002 0.000 3.636 3.027 LGA G 42 G 42 12.039 0 0.051 0.051 16.272 0.000 0.000 - LGA R 43 R 43 16.452 0 0.705 1.060 22.434 0.000 0.000 22.434 LGA S 44 S 44 18.537 0 0.248 0.779 19.168 0.000 0.000 16.737 LGA K 45 K 45 22.237 0 0.166 0.898 27.174 0.000 0.000 27.174 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.149 8.145 9.696 17.727 14.515 8.987 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.35 39.773 35.731 0.735 LGA_LOCAL RMSD: 2.348 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.528 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.149 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.290949 * X + -0.051781 * Y + -0.955336 * Z + 27.735777 Y_new = 0.889916 * X + -0.351980 * Y + 0.290103 * Z + -9.046582 Z_new = -0.351281 * X + -0.934574 * Y + -0.056328 * Z + 83.846497 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.254811 0.358939 -1.630995 [DEG: 71.8954 20.5657 -93.4491 ] ZXZ: -1.865613 1.627154 -2.782057 [DEG: -106.8917 93.2291 -159.4001 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS322_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.35 35.731 8.15 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS322_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 17 N ALA 2 9.189 42.271 13.670 1.00 4.34 ATOM 19 CA ALA 2 9.855 41.623 12.538 1.00 4.34 ATOM 21 CB ALA 2 11.284 42.187 12.462 1.00 4.34 ATOM 25 C ALA 2 9.849 40.079 12.522 1.00 4.34 ATOM 26 O ALA 2 10.865 39.429 12.782 1.00 4.34 ATOM 27 N VAL 3 8.732 39.482 12.107 1.00 3.15 ATOM 29 CA VAL 3 8.760 38.148 11.487 1.00 3.15 ATOM 31 CB VAL 3 7.352 37.579 11.249 1.00 3.15 ATOM 33 CG1 VAL 3 7.461 36.083 10.918 1.00 3.15 ATOM 37 CG2 VAL 3 6.460 37.832 12.474 1.00 3.15 ATOM 41 C VAL 3 9.579 38.255 10.193 1.00 3.15 ATOM 42 O VAL 3 9.472 39.240 9.464 1.00 3.15 ATOM 43 N GLN 4 10.412 37.269 9.874 1.00 3.41 ATOM 45 CA GLN 4 11.310 37.362 8.712 1.00 3.41 ATOM 47 CB GLN 4 12.671 36.712 9.026 1.00 3.41 ATOM 50 CG GLN 4 13.396 37.475 10.152 1.00 3.41 ATOM 53 CD GLN 4 14.860 37.078 10.342 1.00 3.41 ATOM 54 OE1 GLN 4 15.501 36.448 9.519 1.00 3.41 ATOM 55 NE2 GLN 4 15.474 37.466 11.437 1.00 3.41 ATOM 58 C GLN 4 10.652 36.847 7.427 1.00 3.41 ATOM 59 O GLN 4 11.037 35.812 6.888 1.00 3.41 ATOM 60 N GLY 5 9.621 37.566 6.968 1.00 3.15 ATOM 62 CA GLY 5 8.703 37.081 5.939 1.00 3.15 ATOM 65 C GLY 5 8.282 38.097 4.878 1.00 3.15 ATOM 66 O GLY 5 7.356 38.855 5.122 1.00 3.15 ATOM 67 N PRO 6 8.747 38.010 3.621 1.00 2.56 ATOM 68 CD PRO 6 9.970 37.341 3.191 1.00 2.56 ATOM 71 CG PRO 6 9.945 37.365 1.660 1.00 2.56 ATOM 74 CB PRO 6 9.001 38.523 1.330 1.00 2.56 ATOM 77 CA PRO 6 7.962 38.455 2.457 1.00 2.56 ATOM 79 C PRO 6 6.798 37.473 2.171 1.00 2.56 ATOM 80 O PRO 6 6.576 37.033 1.048 1.00 2.56 ATOM 81 N TRP 7 6.132 37.033 3.240 1.00 2.50 ATOM 83 CA TRP 7 5.389 35.773 3.339 1.00 2.50 ATOM 85 CB TRP 7 5.579 35.226 4.763 1.00 2.50 ATOM 88 CG TRP 7 6.830 34.463 5.098 1.00 2.50 ATOM 89 CD1 TRP 7 7.095 33.987 6.337 1.00 2.50 ATOM 91 NE1 TRP 7 8.262 33.259 6.323 1.00 2.50 ATOM 93 CE2 TRP 7 8.839 33.249 5.076 1.00 2.50 ATOM 94 CZ2 TRP 7 10.008 32.651 4.587 1.00 2.50 ATOM 96 CH2 TRP 7 10.340 32.806 3.234 1.00 2.50 ATOM 98 CZ3 TRP 7 9.504 33.560 2.394 1.00 2.50 ATOM 100 CE3 TRP 7 8.333 34.160 2.897 1.00 2.50 ATOM 102 CD2 TRP 7 7.953 34.016 4.255 1.00 2.50 ATOM 103 C TRP 7 3.901 35.901 3.065 1.00 2.50 ATOM 104 O TRP 7 3.248 34.869 2.959 1.00 2.50 ATOM 105 N VAL 8 3.354 37.120 3.000 1.00 2.91 ATOM 107 CA VAL 8 1.907 37.292 2.845 1.00 2.91 ATOM 109 CB VAL 8 1.084 37.024 4.128 1.00 2.91 ATOM 111 CG1 VAL 8 0.707 35.562 4.425 1.00 2.91 ATOM 115 CG2 VAL 8 1.805 37.547 5.354 1.00 2.91 ATOM 119 C VAL 8 1.403 38.496 2.046 1.00 2.91 ATOM 120 O VAL 8 1.311 38.443 0.823 1.00 2.91 ATOM 121 N GLY 9 0.943 39.545 2.723 1.00 2.83 ATOM 123 CA GLY 9 -0.150 40.373 2.220 1.00 2.83 ATOM 126 C GLY 9 -1.515 39.753 2.525 1.00 2.83 ATOM 127 O GLY 9 -1.721 38.528 2.436 1.00 2.83 ATOM 128 N SER 10 -2.485 40.628 2.840 1.00 3.59 ATOM 130 CA SER 10 -3.835 40.104 3.044 1.00 3.59 ATOM 132 CB SER 10 -4.658 40.658 4.187 1.00 3.59 ATOM 135 OG SER 10 -5.645 39.742 4.621 1.00 3.59 ATOM 137 C SER 10 -4.501 39.468 1.818 1.00 3.59 ATOM 138 O SER 10 -5.244 38.498 1.964 1.00 3.59 ATOM 139 N SER 11 -4.052 39.837 0.610 1.00 2.97 ATOM 141 CA SER 11 -4.220 39.019 -0.604 1.00 2.97 ATOM 143 CB SER 11 -5.623 39.248 -1.201 1.00 2.97 ATOM 146 OG SER 11 -5.764 40.535 -1.775 1.00 2.97 ATOM 148 C SER 11 -3.940 37.524 -0.410 1.00 2.97 ATOM 149 O SER 11 -4.794 36.702 -0.697 1.00 2.97 ATOM 150 N TYR 12 -2.768 37.161 0.122 1.00 2.76 ATOM 152 CA TYR 12 -2.378 35.766 0.400 1.00 2.76 ATOM 154 CB TYR 12 -0.926 35.791 0.906 1.00 2.76 ATOM 157 CG TYR 12 -0.095 34.527 0.750 1.00 2.76 ATOM 158 CD1 TYR 12 1.171 34.614 0.133 1.00 2.76 ATOM 160 CE1 TYR 12 1.983 33.471 0.019 1.00 2.76 ATOM 162 CZ TYR 12 1.526 32.230 0.503 1.00 2.76 ATOM 163 OH TYR 12 2.306 31.123 0.383 1.00 2.76 ATOM 165 CE2 TYR 12 0.260 32.137 1.119 1.00 2.76 ATOM 167 CD2 TYR 12 -0.535 33.289 1.260 1.00 2.76 ATOM 169 C TYR 12 -3.337 35.132 1.406 1.00 2.76 ATOM 170 O TYR 12 -3.768 33.994 1.209 1.00 2.76 ATOM 171 N VAL 13 -3.721 35.867 2.464 1.00 2.66 ATOM 173 CA VAL 13 -4.717 35.321 3.422 1.00 2.66 ATOM 175 CB VAL 13 -5.032 36.324 4.552 1.00 2.66 ATOM 177 CG1 VAL 13 -6.014 35.747 5.581 1.00 2.66 ATOM 181 CG2 VAL 13 -3.766 36.761 5.303 1.00 2.66 ATOM 185 C VAL 13 -6.008 34.890 2.703 1.00 2.66 ATOM 186 O VAL 13 -6.420 33.724 2.794 1.00 2.66 ATOM 187 N ALA 14 -6.604 35.831 1.969 1.00 3.64 ATOM 189 CA ALA 14 -7.876 35.706 1.260 1.00 3.64 ATOM 191 CB ALA 14 -8.197 37.097 0.707 1.00 3.64 ATOM 195 C ALA 14 -7.847 34.635 0.154 1.00 3.64 ATOM 196 O ALA 14 -8.818 33.899 -0.013 1.00 3.64 ATOM 197 N GLU 15 -6.723 34.505 -0.551 1.00 2.70 ATOM 199 CA GLU 15 -6.494 33.478 -1.565 1.00 2.70 ATOM 201 CB GLU 15 -5.308 33.870 -2.466 1.00 2.70 ATOM 204 CG GLU 15 -5.233 32.998 -3.733 1.00 2.70 ATOM 207 CD GLU 15 -4.354 33.634 -4.822 1.00 2.70 ATOM 208 OE1 GLU 15 -3.113 33.599 -4.650 1.00 2.70 ATOM 209 OE2 GLU 15 -4.936 34.155 -5.809 1.00 2.70 ATOM 210 C GLU 15 -6.347 32.085 -0.961 1.00 2.70 ATOM 211 O GLU 15 -6.767 31.116 -1.595 1.00 2.70 ATOM 212 N THR 16 -5.843 31.956 0.279 1.00 2.96 ATOM 214 CA THR 16 -5.580 30.612 0.847 1.00 2.96 ATOM 216 CB THR 16 -4.073 30.323 0.990 1.00 2.96 ATOM 218 CG2 THR 16 -3.373 30.251 -0.366 1.00 2.96 ATOM 222 OG1 THR 16 -3.402 31.325 1.708 1.00 2.96 ATOM 224 C THR 16 -6.431 30.288 2.073 1.00 2.96 ATOM 225 O THR 16 -6.139 29.346 2.813 1.00 2.96 ATOM 226 N GLY 17 -7.511 31.057 2.273 1.00 3.46 ATOM 228 CA GLY 17 -8.466 30.933 3.378 1.00 3.46 ATOM 231 C GLY 17 -7.800 30.819 4.737 1.00 3.46 ATOM 232 O GLY 17 -8.229 30.012 5.562 1.00 3.46 ATOM 233 N GLN 18 -6.724 31.584 4.952 1.00 3.13 ATOM 235 CA GLN 18 -5.869 31.450 6.137 1.00 3.13 ATOM 237 CB GLN 18 -4.421 31.835 5.812 1.00 3.13 ATOM 240 CG GLN 18 -3.763 30.923 4.775 1.00 3.13 ATOM 243 CD GLN 18 -3.523 29.516 5.307 1.00 3.13 ATOM 244 OE1 GLN 18 -2.657 29.285 6.138 1.00 3.13 ATOM 245 NE2 GLN 18 -4.287 28.532 4.890 1.00 3.13 ATOM 248 C GLN 18 -6.425 32.181 7.370 1.00 3.13 ATOM 249 O GLN 18 -5.761 33.021 7.981 1.00 3.13 ATOM 250 N ASN 19 -7.605 31.742 7.812 1.00 3.64 ATOM 252 CA ASN 19 -8.027 31.836 9.206 1.00 3.64 ATOM 254 CB ASN 19 -9.331 31.046 9.401 1.00 3.64 ATOM 257 CG ASN 19 -10.421 31.500 8.450 1.00 3.64 ATOM 258 OD1 ASN 19 -10.786 32.659 8.398 1.00 3.64 ATOM 259 ND2 ASN 19 -10.939 30.611 7.634 1.00 3.64 ATOM 262 C ASN 19 -6.902 31.318 10.133 1.00 3.64 ATOM 263 O ASN 19 -6.610 31.922 11.159 1.00 3.64 ATOM 264 N TRP 20 -6.206 30.244 9.718 1.00 4.00 ATOM 266 CA TRP 20 -4.986 29.771 10.378 1.00 4.00 ATOM 268 CB TRP 20 -4.442 28.520 9.671 1.00 4.00 ATOM 271 CG TRP 20 -3.186 27.984 10.294 1.00 4.00 ATOM 272 CD1 TRP 20 -3.127 27.110 11.325 1.00 4.00 ATOM 274 NE1 TRP 20 -1.817 26.952 11.735 1.00 4.00 ATOM 276 CE2 TRP 20 -0.964 27.763 11.019 1.00 4.00 ATOM 277 CZ2 TRP 20 0.408 28.030 11.115 1.00 4.00 ATOM 279 CH2 TRP 20 0.980 28.980 10.255 1.00 4.00 ATOM 281 CZ3 TRP 20 0.185 29.624 9.289 1.00 4.00 ATOM 283 CE3 TRP 20 -1.185 29.320 9.183 1.00 4.00 ATOM 285 CD2 TRP 20 -1.803 28.403 10.059 1.00 4.00 ATOM 286 C TRP 20 -3.879 30.834 10.496 1.00 4.00 ATOM 287 O TRP 20 -3.245 30.925 11.544 1.00 4.00 ATOM 288 N ALA 21 -3.635 31.649 9.459 1.00 2.94 ATOM 290 CA ALA 21 -2.591 32.674 9.508 1.00 2.94 ATOM 292 CB ALA 21 -2.161 33.131 8.111 1.00 2.94 ATOM 296 C ALA 21 -3.012 33.886 10.351 1.00 2.94 ATOM 297 O ALA 21 -2.178 34.436 11.072 1.00 2.94 ATOM 298 N SER 22 -4.277 34.321 10.291 1.00 3.43 ATOM 300 CA SER 22 -4.741 35.411 11.165 1.00 3.43 ATOM 302 CB SER 22 -6.098 35.949 10.708 1.00 3.43 ATOM 305 OG SER 22 -7.057 34.919 10.623 1.00 3.43 ATOM 307 C SER 22 -4.716 35.045 12.661 1.00 3.43 ATOM 308 O SER 22 -4.226 35.841 13.477 1.00 3.43 ATOM 309 N LEU 23 -5.152 33.822 12.996 1.00 3.54 ATOM 311 CA LEU 23 -4.994 33.212 14.321 1.00 3.54 ATOM 313 CB LEU 23 -5.653 31.819 14.340 1.00 3.54 ATOM 316 CG LEU 23 -7.193 31.839 14.315 1.00 3.54 ATOM 318 CD1 LEU 23 -7.720 30.422 14.088 1.00 3.54 ATOM 322 CD2 LEU 23 -7.794 32.356 15.624 1.00 3.54 ATOM 326 C LEU 23 -3.519 33.157 14.732 1.00 3.54 ATOM 327 O LEU 23 -3.128 33.922 15.605 1.00 3.54 ATOM 328 N ALA 24 -2.667 32.402 14.030 1.00 2.64 ATOM 330 CA ALA 24 -1.247 32.240 14.366 1.00 2.64 ATOM 332 CB ALA 24 -0.574 31.379 13.289 1.00 2.64 ATOM 336 C ALA 24 -0.506 33.573 14.575 1.00 2.64 ATOM 337 O ALA 24 0.261 33.729 15.528 1.00 2.64 ATOM 338 N ALA 25 -0.770 34.569 13.726 1.00 3.76 ATOM 340 CA ALA 25 -0.218 35.908 13.880 1.00 3.76 ATOM 342 CB ALA 25 -0.620 36.705 12.637 1.00 3.76 ATOM 346 C ALA 25 -0.684 36.601 15.180 1.00 3.76 ATOM 347 O ALA 25 0.146 37.132 15.925 1.00 3.76 ATOM 348 N ASN 26 -1.995 36.608 15.462 1.00 3.42 ATOM 350 CA ASN 26 -2.527 37.279 16.658 1.00 3.42 ATOM 352 CB ASN 26 -4.027 37.547 16.467 1.00 3.42 ATOM 355 CG ASN 26 -4.259 38.747 15.571 1.00 3.42 ATOM 356 OD1 ASN 26 -3.706 39.816 15.774 1.00 3.42 ATOM 357 ND2 ASN 26 -5.061 38.623 14.540 1.00 3.42 ATOM 360 C ASN 26 -2.238 36.551 17.982 1.00 3.42 ATOM 361 O ASN 26 -2.136 37.198 19.025 1.00 3.42 ATOM 362 N GLU 27 -2.053 35.237 17.968 1.00 2.15 ATOM 364 CA GLU 27 -1.678 34.418 19.120 1.00 2.15 ATOM 366 CB GLU 27 -2.061 32.954 18.842 1.00 2.15 ATOM 369 CG GLU 27 -3.578 32.721 18.815 1.00 2.15 ATOM 372 CD GLU 27 -3.897 31.263 18.455 1.00 2.15 ATOM 373 OE1 GLU 27 -3.787 30.930 17.253 1.00 2.15 ATOM 374 OE2 GLU 27 -4.231 30.496 19.385 1.00 2.15 ATOM 375 C GLU 27 -0.183 34.534 19.434 1.00 2.15 ATOM 376 O GLU 27 0.180 34.844 20.570 1.00 2.15 ATOM 377 N LEU 28 0.689 34.355 18.434 1.00 2.20 ATOM 379 CA LEU 28 2.131 34.223 18.675 1.00 2.20 ATOM 381 CB LEU 28 2.733 33.173 17.717 1.00 2.20 ATOM 384 CG LEU 28 2.445 31.684 18.018 1.00 2.20 ATOM 386 CD1 LEU 28 3.132 31.224 19.304 1.00 2.20 ATOM 390 CD2 LEU 28 0.972 31.301 18.108 1.00 2.20 ATOM 394 C LEU 28 2.892 35.545 18.575 1.00 2.20 ATOM 395 O LEU 28 4.012 35.611 19.072 1.00 2.20 ATOM 396 N ARG 29 2.355 36.580 17.908 1.00 2.59 ATOM 398 CA ARG 29 3.081 37.820 17.527 1.00 2.59 ATOM 400 CB ARG 29 3.508 38.664 18.755 1.00 2.59 ATOM 403 CG ARG 29 2.571 38.667 19.969 1.00 2.59 ATOM 406 CD ARG 29 1.189 39.281 19.695 1.00 2.59 ATOM 409 NE ARG 29 0.079 38.475 20.241 1.00 2.59 ATOM 411 CZ ARG 29 -0.095 37.977 21.452 1.00 2.59 ATOM 412 NH1 ARG 29 -1.140 37.245 21.684 1.00 2.59 ATOM 415 NH2 ARG 29 0.737 38.185 22.440 1.00 2.59 ATOM 418 C ARG 29 4.314 37.588 16.625 1.00 2.59 ATOM 419 O ARG 29 4.875 38.558 16.132 1.00 2.59 ATOM 420 N VAL 30 4.756 36.335 16.441 1.00 2.38 ATOM 422 CA VAL 30 6.091 35.995 15.929 1.00 2.38 ATOM 424 CB VAL 30 7.067 35.608 17.069 1.00 2.38 ATOM 426 CG1 VAL 30 8.475 35.297 16.540 1.00 2.38 ATOM 430 CG2 VAL 30 7.222 36.735 18.100 1.00 2.38 ATOM 434 C VAL 30 6.090 34.906 14.846 1.00 2.38 ATOM 435 O VAL 30 6.649 35.108 13.777 1.00 2.38 ATOM 436 N THR 31 5.538 33.727 15.126 1.00 2.46 ATOM 438 CA THR 31 6.150 32.474 14.644 1.00 2.46 ATOM 440 CB THR 31 5.408 31.272 15.249 1.00 2.46 ATOM 442 CG2 THR 31 6.099 29.923 15.049 1.00 2.46 ATOM 446 OG1 THR 31 5.339 31.456 16.646 1.00 2.46 ATOM 448 C THR 31 6.313 32.280 13.133 1.00 2.46 ATOM 449 O THR 31 7.351 31.776 12.720 1.00 2.46 ATOM 450 N GLU 32 5.304 32.582 12.312 1.00 2.67 ATOM 452 CA GLU 32 5.219 32.023 10.955 1.00 2.67 ATOM 454 CB GLU 32 4.789 30.542 11.090 1.00 2.67 ATOM 457 CG GLU 32 5.787 29.562 10.467 1.00 2.67 ATOM 460 CD GLU 32 5.666 29.623 8.949 1.00 2.67 ATOM 461 OE1 GLU 32 6.242 30.556 8.349 1.00 2.67 ATOM 462 OE2 GLU 32 4.856 28.841 8.403 1.00 2.67 ATOM 463 C GLU 32 4.209 32.780 10.074 1.00 2.67 ATOM 464 O GLU 32 3.270 33.367 10.608 1.00 2.67 ATOM 465 N ARG 33 4.397 32.742 8.738 1.00 2.10 ATOM 467 CA ARG 33 3.613 33.400 7.647 1.00 2.10 ATOM 469 CB ARG 33 3.122 32.325 6.654 1.00 2.10 ATOM 472 CG ARG 33 4.225 31.708 5.771 1.00 2.10 ATOM 475 CD ARG 33 3.750 30.434 5.064 1.00 2.10 ATOM 478 NE ARG 33 3.498 29.370 6.048 1.00 2.10 ATOM 480 CZ ARG 33 2.354 28.827 6.403 1.00 2.10 ATOM 481 NH1 ARG 33 2.310 28.132 7.496 1.00 2.10 ATOM 484 NH2 ARG 33 1.254 28.995 5.720 1.00 2.10 ATOM 487 C ARG 33 2.432 34.310 8.090 1.00 2.10 ATOM 488 O ARG 33 1.272 33.923 7.932 1.00 2.10 ATOM 489 N PRO 34 2.684 35.528 8.618 1.00 2.04 ATOM 490 CD PRO 34 3.984 36.030 9.032 1.00 2.04 ATOM 493 CG PRO 34 3.790 36.560 10.455 1.00 2.04 ATOM 496 CB PRO 34 2.283 36.586 10.694 1.00 2.04 ATOM 499 CA PRO 34 1.661 36.291 9.328 1.00 2.04 ATOM 501 C PRO 34 1.194 37.586 8.647 1.00 2.04 ATOM 502 O PRO 34 1.982 38.427 8.187 1.00 2.04 ATOM 503 N PHE 35 -0.124 37.823 8.681 1.00 2.71 ATOM 505 CA PHE 35 -0.680 39.110 8.255 1.00 2.71 ATOM 507 CB PHE 35 -2.210 39.149 8.383 1.00 2.71 ATOM 510 CG PHE 35 -2.703 39.663 9.716 1.00 2.71 ATOM 511 CD1 PHE 35 -3.057 41.019 9.862 1.00 2.71 ATOM 513 CE1 PHE 35 -3.417 41.517 11.126 1.00 2.71 ATOM 515 CZ PHE 35 -3.418 40.663 12.241 1.00 2.71 ATOM 517 CE2 PHE 35 -3.062 39.311 12.093 1.00 2.71 ATOM 519 CD2 PHE 35 -2.716 38.808 10.829 1.00 2.71 ATOM 521 C PHE 35 0.018 40.302 8.959 1.00 2.71 ATOM 522 O PHE 35 0.288 41.309 8.314 1.00 2.71 ATOM 523 N TRP 36 0.459 40.143 10.214 1.00 2.57 ATOM 525 CA TRP 36 1.343 41.103 10.887 1.00 2.57 ATOM 527 CB TRP 36 1.550 40.708 12.364 1.00 2.57 ATOM 530 CG TRP 36 0.442 41.141 13.281 1.00 2.57 ATOM 531 CD1 TRP 36 -0.341 40.349 14.053 1.00 2.57 ATOM 533 NE1 TRP 36 -1.286 41.119 14.705 1.00 2.57 ATOM 535 CE2 TRP 36 -1.149 42.456 14.400 1.00 2.57 ATOM 536 CZ2 TRP 36 -1.861 43.606 14.769 1.00 2.57 ATOM 538 CH2 TRP 36 -1.427 44.860 14.304 1.00 2.57 ATOM 540 CZ3 TRP 36 -0.276 44.949 13.500 1.00 2.57 ATOM 542 CE3 TRP 36 0.431 43.785 13.137 1.00 2.57 ATOM 544 CD2 TRP 36 -0.010 42.507 13.543 1.00 2.57 ATOM 545 C TRP 36 2.693 41.373 10.191 1.00 2.57 ATOM 546 O TRP 36 3.155 42.510 10.206 1.00 2.57 ATOM 547 N ILE 37 3.317 40.403 9.507 1.00 2.80 ATOM 549 CA ILE 37 4.430 40.722 8.595 1.00 2.80 ATOM 551 CB ILE 37 5.290 39.503 8.216 1.00 2.80 ATOM 553 CG2 ILE 37 4.954 38.856 6.862 1.00 2.80 ATOM 557 CG1 ILE 37 6.795 39.822 8.294 1.00 2.80 ATOM 560 CD1 ILE 37 7.350 40.963 7.432 1.00 2.80 ATOM 564 C ILE 37 3.970 41.507 7.371 1.00 2.80 ATOM 565 O ILE 37 4.706 42.356 6.882 1.00 2.80 ATOM 566 N SER 38 2.745 41.274 6.880 1.00 3.41 ATOM 568 CA SER 38 2.209 42.155 5.807 1.00 3.41 ATOM 570 CB SER 38 0.789 41.758 5.401 1.00 3.41 ATOM 573 OG SER 38 0.698 40.354 5.460 1.00 3.41 ATOM 575 C SER 38 2.171 43.623 6.229 1.00 3.41 ATOM 576 O SER 38 2.730 44.471 5.531 1.00 3.41 ATOM 577 N SER 39 1.575 43.903 7.395 1.00 3.36 ATOM 579 CA SER 39 1.517 45.269 7.922 1.00 3.36 ATOM 581 CB SER 39 0.540 45.387 9.091 1.00 3.36 ATOM 584 OG SER 39 0.888 44.528 10.152 1.00 3.36 ATOM 586 C SER 39 2.897 45.859 8.251 1.00 3.36 ATOM 587 O SER 39 3.135 47.049 8.047 1.00 3.36 ATOM 588 N PHE 40 3.849 45.018 8.659 1.00 3.24 ATOM 590 CA PHE 40 5.253 45.408 8.806 1.00 3.24 ATOM 592 CB PHE 40 5.965 44.311 9.612 1.00 3.24 ATOM 595 CG PHE 40 7.389 44.619 10.038 1.00 3.24 ATOM 596 CD1 PHE 40 7.637 45.187 11.302 1.00 3.24 ATOM 598 CE1 PHE 40 8.952 45.472 11.709 1.00 3.24 ATOM 600 CZ PHE 40 10.026 45.202 10.843 1.00 3.24 ATOM 602 CE2 PHE 40 9.785 44.628 9.582 1.00 3.24 ATOM 604 CD2 PHE 40 8.470 44.332 9.182 1.00 3.24 ATOM 606 C PHE 40 5.992 45.720 7.485 1.00 3.24 ATOM 607 O PHE 40 6.946 46.498 7.509 1.00 3.24 ATOM 608 N ILE 41 5.588 45.160 6.328 1.00 3.56 ATOM 610 CA ILE 41 6.429 45.172 5.102 1.00 3.56 ATOM 612 CB ILE 41 6.693 43.726 4.608 1.00 3.56 ATOM 614 CG2 ILE 41 5.558 43.186 3.724 1.00 3.56 ATOM 618 CG1 ILE 41 8.070 43.597 3.915 1.00 3.56 ATOM 621 CD1 ILE 41 8.463 42.152 3.579 1.00 3.56 ATOM 625 C ILE 41 6.010 46.167 4.023 1.00 3.56 ATOM 626 O ILE 41 6.526 46.163 2.903 1.00 3.56 ATOM 627 N GLY 42 5.084 47.068 4.343 1.00 2.82 ATOM 629 CA GLY 42 4.833 48.268 3.546 1.00 2.82 ATOM 632 C GLY 42 4.083 48.012 2.239 1.00 2.82 ATOM 633 O GLY 42 3.667 49.018 1.670 1.00 2.82 ATOM 634 N ARG 43 3.970 46.765 1.707 1.00 3.83 ATOM 636 CA ARG 43 3.321 46.466 0.401 1.00 3.83 ATOM 638 CB ARG 43 3.903 47.378 -0.735 1.00 3.83 ATOM 641 CG ARG 43 5.410 47.242 -1.053 1.00 3.83 ATOM 644 CD ARG 43 6.365 48.029 -0.136 1.00 3.83 ATOM 647 NE ARG 43 5.929 49.431 0.031 1.00 3.83 ATOM 649 CZ ARG 43 6.247 50.482 -0.695 1.00 3.83 ATOM 650 NH1 ARG 43 5.632 51.612 -0.493 1.00 3.83 ATOM 653 NH2 ARG 43 7.150 50.436 -1.638 1.00 3.83 ATOM 656 C ARG 43 3.216 45.054 -0.217 1.00 3.83 ATOM 657 O ARG 43 2.710 44.965 -1.336 1.00 3.83 ATOM 658 N SER 44 3.439 43.932 0.459 1.00 4.03 ATOM 660 CA SER 44 2.421 42.866 0.295 1.00 4.03 ATOM 662 CB SER 44 2.954 41.522 0.800 1.00 4.03 ATOM 665 OG SER 44 3.322 41.598 2.160 1.00 4.03 ATOM 667 C SER 44 1.232 43.415 1.076 1.00 4.03 ATOM 668 O SER 44 1.077 43.147 2.255 1.00 4.03 ATOM 669 N LYS 45 0.538 44.334 0.407 1.00 2.72 ATOM 671 CA LYS 45 -0.625 45.140 0.765 1.00 2.72 ATOM 673 CB LYS 45 -1.761 44.590 -0.136 1.00 2.72 ATOM 676 CG LYS 45 -2.105 43.090 0.054 1.00 2.72 ATOM 679 CD LYS 45 -2.035 42.266 -1.246 1.00 2.72 ATOM 682 CE LYS 45 -3.318 42.309 -2.088 1.00 2.72 ATOM 685 NZ LYS 45 -3.607 43.625 -2.708 1.00 2.72 ATOM 689 C LYS 45 -1.168 45.206 2.197 1.00 2.72 ATOM 690 O LYS 45 -1.367 44.191 2.871 1.00 2.72 TER END