####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS322_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.74 4.74 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 8 - 32 1.88 6.10 LONGEST_CONTINUOUS_SEGMENT: 25 9 - 33 1.84 6.30 LCS_AVERAGE: 43.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.53 6.57 LCS_AVERAGE: 18.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 44 0 3 3 7 11 16 25 31 33 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT V 3 V 3 4 8 44 1 3 4 9 10 13 16 25 29 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT Q 4 Q 4 4 8 44 2 3 4 5 9 15 20 28 32 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 2 3 5 12 17 24 28 31 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 1 4 5 7 9 13 20 26 32 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 1 4 5 7 8 10 13 16 28 32 36 39 41 41 43 43 43 43 43 43 LCS_GDT V 8 V 8 4 25 44 1 4 5 8 18 26 29 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT G 9 G 9 10 25 44 8 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 10 S 10 10 25 44 8 10 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 11 S 11 10 25 44 8 10 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT Y 12 Y 12 10 25 44 8 10 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT V 13 V 13 10 25 44 8 10 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT A 14 A 14 10 25 44 8 10 14 20 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT E 15 E 15 10 25 44 8 10 14 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT T 16 T 16 10 25 44 8 10 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT G 17 G 17 10 25 44 5 10 14 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT Q 18 Q 18 10 25 44 4 5 12 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT N 19 N 19 7 25 44 4 5 7 8 20 26 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT W 20 W 20 13 25 44 10 14 15 18 23 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT A 21 A 21 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 22 S 22 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT L 23 L 23 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT A 24 A 24 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT A 25 A 25 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT N 26 N 26 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT E 27 E 27 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT L 28 L 28 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT R 29 R 29 13 25 44 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT V 30 V 30 13 25 44 8 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT T 31 T 31 13 25 44 5 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT E 32 E 32 13 25 44 4 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT R 33 R 33 5 25 44 3 3 5 11 16 24 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT P 34 P 34 4 18 44 0 3 5 6 7 14 16 21 25 29 33 39 40 41 43 43 43 43 43 43 LCS_GDT F 35 F 35 3 18 44 3 9 13 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT W 36 W 36 6 18 44 4 4 6 17 19 25 29 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT I 37 I 37 6 18 44 4 4 6 17 19 25 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 38 S 38 6 9 44 4 4 6 9 19 26 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 39 S 39 6 9 44 4 4 8 19 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT F 40 F 40 6 9 44 4 4 6 9 20 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT I 41 I 41 6 9 44 4 4 8 19 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT G 42 G 42 4 9 44 3 4 5 6 9 14 20 30 33 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT R 43 R 43 4 9 44 3 4 6 9 10 13 16 25 29 36 39 40 41 41 43 43 43 43 43 43 LCS_GDT S 44 S 44 4 9 44 0 4 5 9 10 12 15 17 19 20 21 26 34 38 43 43 43 43 43 43 LCS_GDT K 45 K 45 0 3 44 0 0 0 3 3 3 3 6 9 11 12 13 15 15 18 19 19 28 29 33 LCS_AVERAGE LCS_A: 53.94 ( 18.75 43.08 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 14 15 21 24 27 30 33 34 36 39 40 41 41 43 43 43 43 43 43 GDT PERCENT_AT 22.73 31.82 34.09 47.73 54.55 61.36 68.18 75.00 77.27 81.82 88.64 90.91 93.18 93.18 97.73 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.36 0.55 0.73 1.43 1.65 1.85 2.09 2.35 2.55 3.17 3.46 3.52 3.65 3.65 4.10 4.10 4.10 4.10 4.10 4.10 GDT RMS_ALL_AT 6.58 6.40 6.36 6.34 6.04 5.86 5.76 5.84 5.58 4.98 4.84 4.86 4.85 4.86 4.78 4.78 4.78 4.78 4.78 4.78 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.136 0 0.617 0.641 8.432 0.000 0.000 - LGA V 3 V 3 9.002 0 0.092 0.991 10.000 0.000 0.000 8.912 LGA Q 4 Q 4 9.006 0 0.091 1.142 16.013 0.000 0.000 14.178 LGA G 5 G 5 6.723 0 0.088 0.088 10.370 0.000 0.000 - LGA P 6 P 6 9.281 0 0.021 0.059 10.332 0.000 0.000 10.332 LGA W 7 W 7 9.458 0 0.055 1.089 17.148 0.000 0.000 15.101 LGA V 8 V 8 4.050 0 0.602 0.647 6.605 15.455 10.649 3.565 LGA G 9 G 9 2.616 0 0.539 0.539 2.616 35.455 35.455 - LGA S 10 S 10 1.142 0 0.035 0.518 1.749 74.545 71.515 1.470 LGA S 11 S 11 1.309 0 0.173 0.789 1.936 65.455 65.758 0.605 LGA Y 12 Y 12 1.435 0 0.037 1.039 13.201 74.545 28.030 13.201 LGA V 13 V 13 1.549 0 0.099 1.327 5.286 51.364 44.156 5.286 LGA A 14 A 14 2.079 0 0.026 0.025 2.851 42.273 41.455 - LGA E 15 E 15 2.095 0 0.000 1.322 4.104 44.545 28.283 4.104 LGA T 16 T 16 1.204 0 0.021 0.070 1.930 58.182 68.571 0.564 LGA G 17 G 17 2.054 0 0.184 0.184 2.782 38.636 38.636 - LGA Q 18 Q 18 1.794 0 0.018 1.019 3.385 41.818 40.000 3.000 LGA N 19 N 19 3.364 0 0.532 1.376 9.377 26.364 13.182 8.297 LGA W 20 W 20 3.177 0 0.553 1.101 10.056 34.545 9.870 10.056 LGA A 21 A 21 1.454 0 0.047 0.052 2.008 62.727 63.273 - LGA S 22 S 22 1.315 0 0.080 0.619 1.991 65.455 60.606 1.627 LGA L 23 L 23 1.940 0 0.025 0.916 5.654 50.909 35.000 5.654 LGA A 24 A 24 1.947 0 0.055 0.070 2.054 50.909 48.364 - LGA A 25 A 25 0.908 0 0.033 0.037 1.182 73.636 75.273 - LGA N 26 N 26 0.319 0 0.047 0.920 3.579 86.364 64.545 2.626 LGA E 27 E 27 1.270 0 0.071 0.287 2.319 65.909 56.364 2.233 LGA L 28 L 28 1.631 0 0.030 1.209 4.136 54.545 38.864 4.136 LGA R 29 R 29 1.281 0 0.101 1.656 8.031 58.636 33.719 8.031 LGA V 30 V 30 1.275 0 0.193 0.957 3.248 69.545 58.961 3.248 LGA T 31 T 31 1.425 0 0.098 0.101 2.532 55.000 46.234 2.532 LGA E 32 E 32 1.471 0 0.517 1.329 7.125 61.818 34.343 6.645 LGA R 33 R 33 3.785 0 0.151 1.093 7.876 7.273 14.545 5.082 LGA P 34 P 34 6.643 0 0.632 0.675 8.811 0.000 0.000 8.811 LGA F 35 F 35 2.409 0 0.594 0.665 9.283 28.182 13.223 9.283 LGA W 36 W 36 4.034 0 0.620 0.651 10.843 17.727 5.065 10.843 LGA I 37 I 37 3.721 0 0.034 0.904 7.656 30.000 15.000 7.656 LGA S 38 S 38 3.266 0 0.103 0.623 6.465 20.909 14.242 6.465 LGA S 39 S 39 2.905 0 0.190 0.741 5.118 24.091 21.515 4.177 LGA F 40 F 40 3.056 0 0.135 0.875 9.706 22.273 9.752 9.706 LGA I 41 I 41 3.018 0 0.583 1.079 6.109 17.273 10.682 5.148 LGA G 42 G 42 8.962 0 0.149 0.149 11.523 0.000 0.000 - LGA R 43 R 43 9.997 0 0.728 1.521 11.825 0.000 0.000 10.825 LGA S 44 S 44 14.870 0 0.427 0.407 18.302 0.000 0.000 12.444 LGA K 45 K 45 20.593 0 0.122 0.938 29.261 0.000 0.000 29.261 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.740 4.878 6.576 34.690 27.617 12.727 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.35 63.068 60.112 1.349 LGA_LOCAL RMSD: 2.346 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.839 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.740 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.278581 * X + 0.908213 * Y + 0.312315 * Z + -71.863678 Y_new = 0.850998 * X + 0.384166 * Y + -0.358076 * Z + -4.758421 Z_new = -0.445190 * X + 0.166027 * Y + -0.879910 * Z + 71.749550 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.887160 0.461386 2.955099 [DEG: 108.1263 26.4355 169.3147 ] ZXZ: 0.717245 2.646468 -1.213838 [DEG: 41.0951 151.6315 -69.5478 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS322_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS322_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.35 60.112 4.74 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS322_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 17 N ALA 2 9.112 39.229 6.717 1.00 5.20 ATOM 19 CA ALA 2 9.775 38.514 5.629 1.00 5.20 ATOM 21 CB ALA 2 9.137 37.123 5.521 1.00 5.20 ATOM 25 C ALA 2 9.932 39.117 4.216 1.00 5.20 ATOM 26 O ALA 2 11.036 39.074 3.675 1.00 5.20 ATOM 27 N VAL 3 8.847 39.539 3.578 1.00 5.03 ATOM 29 CA VAL 3 8.749 39.889 2.144 1.00 5.03 ATOM 31 CB VAL 3 8.591 38.655 1.219 1.00 5.03 ATOM 33 CG1 VAL 3 9.906 37.894 1.021 1.00 5.03 ATOM 37 CG2 VAL 3 7.527 37.637 1.668 1.00 5.03 ATOM 41 C VAL 3 7.533 40.774 1.954 1.00 5.03 ATOM 42 O VAL 3 6.565 40.495 2.666 1.00 5.03 ATOM 43 N GLN 4 7.467 41.737 1.003 1.00 4.91 ATOM 45 CA GLN 4 6.108 42.240 0.749 1.00 4.91 ATOM 47 CB GLN 4 5.765 43.444 -0.091 1.00 4.91 ATOM 50 CG GLN 4 5.236 44.581 0.816 1.00 4.91 ATOM 53 CD GLN 4 3.925 44.456 1.606 1.00 4.91 ATOM 54 OE1 GLN 4 3.581 43.458 2.195 1.00 4.91 ATOM 55 NE2 GLN 4 3.115 45.476 1.722 1.00 4.91 ATOM 58 C GLN 4 5.206 41.117 0.316 1.00 4.91 ATOM 59 O GLN 4 5.495 40.329 -0.585 1.00 4.91 ATOM 60 N GLY 5 4.072 41.117 0.975 1.00 4.06 ATOM 62 CA GLY 5 3.156 40.018 0.885 1.00 4.06 ATOM 65 C GLY 5 1.769 40.212 1.489 1.00 4.06 ATOM 66 O GLY 5 1.473 41.167 2.202 1.00 4.06 ATOM 67 N PRO 6 0.850 39.326 1.088 1.00 4.30 ATOM 68 CD PRO 6 1.161 38.087 0.364 1.00 4.30 ATOM 71 CG PRO 6 -0.163 37.486 -0.057 1.00 4.30 ATOM 74 CB PRO 6 -1.024 38.741 -0.120 1.00 4.30 ATOM 77 CA PRO 6 -0.577 39.656 1.036 1.00 4.30 ATOM 79 C PRO 6 -1.341 39.211 2.258 1.00 4.30 ATOM 80 O PRO 6 -2.441 39.744 2.434 1.00 4.30 ATOM 81 N TRP 7 -0.778 38.215 2.972 1.00 3.31 ATOM 83 CA TRP 7 -1.430 37.294 3.905 1.00 3.31 ATOM 85 CB TRP 7 -2.509 36.449 3.198 1.00 3.31 ATOM 88 CG TRP 7 -3.619 36.000 4.111 1.00 3.31 ATOM 89 CD1 TRP 7 -4.601 36.806 4.574 1.00 3.31 ATOM 91 NE1 TRP 7 -5.467 36.085 5.370 1.00 3.31 ATOM 93 CE2 TRP 7 -5.072 34.769 5.486 1.00 3.31 ATOM 94 CZ2 TRP 7 -5.604 33.672 6.181 1.00 3.31 ATOM 96 CH2 TRP 7 -4.962 32.428 6.085 1.00 3.31 ATOM 98 CZ3 TRP 7 -3.803 32.300 5.298 1.00 3.31 ATOM 100 CE3 TRP 7 -3.268 33.414 4.619 1.00 3.31 ATOM 102 CD2 TRP 7 -3.888 34.680 4.688 1.00 3.31 ATOM 103 C TRP 7 -0.476 36.431 4.750 1.00 3.31 ATOM 104 O TRP 7 -0.525 35.206 4.721 1.00 3.31 ATOM 105 N VAL 8 0.405 37.086 5.509 1.00 2.49 ATOM 107 CA VAL 8 1.522 36.456 6.249 1.00 2.49 ATOM 109 CB VAL 8 0.981 35.616 7.445 1.00 2.49 ATOM 111 CG1 VAL 8 2.030 35.036 8.409 1.00 2.49 ATOM 115 CG2 VAL 8 0.130 36.562 8.302 1.00 2.49 ATOM 119 C VAL 8 2.492 35.765 5.271 1.00 2.49 ATOM 120 O VAL 8 2.394 35.936 4.055 1.00 2.49 ATOM 121 N GLY 9 3.527 35.119 5.792 1.00 2.67 ATOM 123 CA GLY 9 4.671 34.606 5.059 1.00 2.67 ATOM 126 C GLY 9 5.125 33.299 5.677 1.00 2.67 ATOM 127 O GLY 9 4.959 33.093 6.882 1.00 2.67 ATOM 128 N SER 10 5.621 32.395 4.831 1.00 2.37 ATOM 130 CA SER 10 5.700 30.960 5.140 1.00 2.37 ATOM 132 CB SER 10 6.307 30.195 3.957 1.00 2.37 ATOM 135 OG SER 10 5.743 30.637 2.735 1.00 2.37 ATOM 137 C SER 10 6.518 30.622 6.391 1.00 2.37 ATOM 138 O SER 10 6.259 29.610 7.033 1.00 2.37 ATOM 139 N SER 11 7.471 31.485 6.748 1.00 2.44 ATOM 141 CA SER 11 8.130 31.497 8.052 1.00 2.44 ATOM 143 CB SER 11 9.110 32.682 8.118 1.00 2.44 ATOM 146 OG SER 11 8.557 33.876 7.569 1.00 2.44 ATOM 148 C SER 11 7.102 31.581 9.181 1.00 2.44 ATOM 149 O SER 11 6.814 30.574 9.816 1.00 2.44 ATOM 150 N TYR 12 6.450 32.734 9.356 1.00 1.69 ATOM 152 CA TYR 12 5.457 32.930 10.414 1.00 1.69 ATOM 154 CB TYR 12 4.924 34.370 10.436 1.00 1.69 ATOM 157 CG TYR 12 5.669 35.283 11.394 1.00 1.69 ATOM 158 CD1 TYR 12 6.840 35.952 10.991 1.00 1.69 ATOM 160 CE1 TYR 12 7.542 36.771 11.896 1.00 1.69 ATOM 162 CZ TYR 12 7.099 36.888 13.228 1.00 1.69 ATOM 163 OH TYR 12 7.801 37.647 14.112 1.00 1.69 ATOM 165 CE2 TYR 12 5.934 36.204 13.640 1.00 1.69 ATOM 167 CD2 TYR 12 5.215 35.415 12.721 1.00 1.69 ATOM 169 C TYR 12 4.290 31.919 10.384 1.00 1.69 ATOM 170 O TYR 12 3.787 31.525 11.448 1.00 1.69 ATOM 171 N VAL 13 3.863 31.465 9.190 1.00 1.65 ATOM 173 CA VAL 13 2.827 30.415 9.087 1.00 1.65 ATOM 175 CB VAL 13 2.214 30.227 7.681 1.00 1.65 ATOM 177 CG1 VAL 13 2.023 31.512 6.874 1.00 1.65 ATOM 181 CG2 VAL 13 2.810 29.150 6.766 1.00 1.65 ATOM 185 C VAL 13 3.300 29.047 9.571 1.00 1.65 ATOM 186 O VAL 13 2.477 28.286 10.070 1.00 1.65 ATOM 187 N ALA 14 4.582 28.707 9.415 1.00 2.12 ATOM 189 CA ALA 14 5.126 27.448 9.918 1.00 2.12 ATOM 191 CB ALA 14 6.365 27.085 9.090 1.00 2.12 ATOM 195 C ALA 14 5.470 27.518 11.417 1.00 2.12 ATOM 196 O ALA 14 5.257 26.554 12.147 1.00 2.12 ATOM 197 N GLU 15 5.963 28.670 11.873 1.00 2.65 ATOM 199 CA GLU 15 6.361 28.975 13.251 1.00 2.65 ATOM 201 CB GLU 15 7.108 30.324 13.241 1.00 2.65 ATOM 204 CG GLU 15 8.498 30.237 12.571 1.00 2.65 ATOM 207 CD GLU 15 8.943 31.527 11.853 1.00 2.65 ATOM 208 OE1 GLU 15 9.803 31.411 10.948 1.00 2.65 ATOM 209 OE2 GLU 15 8.425 32.624 12.161 1.00 2.65 ATOM 210 C GLU 15 5.157 29.045 14.206 1.00 2.65 ATOM 211 O GLU 15 5.253 28.595 15.347 1.00 2.65 ATOM 212 N THR 16 4.006 29.548 13.736 1.00 2.36 ATOM 214 CA THR 16 2.754 29.562 14.521 1.00 2.36 ATOM 216 CB THR 16 2.086 30.945 14.507 1.00 2.36 ATOM 218 CG2 THR 16 3.040 32.029 15.012 1.00 2.36 ATOM 222 OG1 THR 16 1.656 31.304 13.214 1.00 2.36 ATOM 224 C THR 16 1.766 28.456 14.125 1.00 2.36 ATOM 225 O THR 16 0.852 28.130 14.890 1.00 2.36 ATOM 226 N GLY 17 1.965 27.845 12.951 1.00 2.45 ATOM 228 CA GLY 17 1.417 26.566 12.468 1.00 2.45 ATOM 231 C GLY 17 -0.043 26.549 12.008 1.00 2.45 ATOM 232 O GLY 17 -0.425 25.803 11.107 1.00 2.45 ATOM 233 N GLN 18 -0.881 27.364 12.632 1.00 2.33 ATOM 235 CA GLN 18 -2.326 27.180 12.686 1.00 2.33 ATOM 237 CB GLN 18 -2.740 27.075 14.156 1.00 2.33 ATOM 240 CG GLN 18 -2.187 25.823 14.853 1.00 2.33 ATOM 243 CD GLN 18 -2.385 25.917 16.358 1.00 2.33 ATOM 244 OE1 GLN 18 -3.291 25.334 16.929 1.00 2.33 ATOM 245 NE2 GLN 18 -1.553 26.664 17.048 1.00 2.33 ATOM 248 C GLN 18 -3.019 28.345 12.009 1.00 2.33 ATOM 249 O GLN 18 -2.602 29.476 12.216 1.00 2.33 ATOM 250 N ASN 19 -4.061 28.049 11.214 1.00 2.27 ATOM 252 CA ASN 19 -4.889 29.011 10.462 1.00 2.27 ATOM 254 CB ASN 19 -6.195 29.257 11.243 1.00 2.27 ATOM 257 CG ASN 19 -7.230 30.049 10.453 1.00 2.27 ATOM 258 OD1 ASN 19 -6.962 31.042 9.797 1.00 2.27 ATOM 259 ND2 ASN 19 -8.473 29.633 10.467 1.00 2.27 ATOM 262 C ASN 19 -4.112 30.299 10.150 1.00 2.27 ATOM 263 O ASN 19 -4.251 31.317 10.830 1.00 2.27 ATOM 264 N TRP 20 -3.158 30.141 9.232 1.00 2.17 ATOM 266 CA TRP 20 -1.851 30.805 9.218 1.00 2.17 ATOM 268 CB TRP 20 -1.352 30.661 7.786 1.00 2.17 ATOM 271 CG TRP 20 -1.062 29.253 7.345 1.00 2.17 ATOM 272 CD1 TRP 20 -0.823 28.189 8.154 1.00 2.17 ATOM 274 NE1 TRP 20 -0.478 27.093 7.396 1.00 2.17 ATOM 276 CE2 TRP 20 -0.450 27.393 6.052 1.00 2.17 ATOM 277 CZ2 TRP 20 -0.122 26.649 4.910 1.00 2.17 ATOM 279 CH2 TRP 20 -0.172 27.271 3.650 1.00 2.17 ATOM 281 CZ3 TRP 20 -0.540 28.625 3.552 1.00 2.17 ATOM 283 CE3 TRP 20 -0.858 29.366 4.708 1.00 2.17 ATOM 285 CD2 TRP 20 -0.830 28.768 5.986 1.00 2.17 ATOM 286 C TRP 20 -1.831 32.248 9.725 1.00 2.17 ATOM 287 O TRP 20 -1.207 32.554 10.742 1.00 2.17 ATOM 288 N ALA 21 -2.559 33.137 9.059 1.00 1.57 ATOM 290 CA ALA 21 -2.573 34.530 9.456 1.00 1.57 ATOM 292 CB ALA 21 -3.083 35.340 8.268 1.00 1.57 ATOM 296 C ALA 21 -3.360 34.841 10.740 1.00 1.57 ATOM 297 O ALA 21 -3.026 35.788 11.459 1.00 1.57 ATOM 298 N SER 22 -4.376 34.041 11.047 1.00 1.87 ATOM 300 CA SER 22 -5.159 34.155 12.274 1.00 1.87 ATOM 302 CB SER 22 -6.396 33.252 12.225 1.00 1.87 ATOM 305 OG SER 22 -7.120 33.446 11.022 1.00 1.87 ATOM 307 C SER 22 -4.310 33.830 13.496 1.00 1.87 ATOM 308 O SER 22 -4.218 34.663 14.403 1.00 1.87 ATOM 309 N LEU 23 -3.636 32.671 13.514 1.00 1.94 ATOM 311 CA LEU 23 -2.831 32.323 14.693 1.00 1.94 ATOM 313 CB LEU 23 -2.792 30.796 14.913 1.00 1.94 ATOM 316 CG LEU 23 -3.156 30.274 16.321 1.00 1.94 ATOM 318 CD1 LEU 23 -2.172 30.706 17.397 1.00 1.94 ATOM 322 CD2 LEU 23 -4.583 30.638 16.750 1.00 1.94 ATOM 326 C LEU 23 -1.482 33.059 14.743 1.00 1.94 ATOM 327 O LEU 23 -1.016 33.369 15.838 1.00 1.94 ATOM 328 N ALA 24 -0.935 33.509 13.606 1.00 1.40 ATOM 330 CA ALA 24 0.151 34.495 13.628 1.00 1.40 ATOM 332 CB ALA 24 0.652 34.702 12.197 1.00 1.40 ATOM 336 C ALA 24 -0.259 35.817 14.319 1.00 1.40 ATOM 337 O ALA 24 0.449 36.296 15.213 1.00 1.40 ATOM 338 N ALA 25 -1.417 36.397 13.960 1.00 1.05 ATOM 340 CA ALA 25 -1.925 37.613 14.615 1.00 1.05 ATOM 342 CB ALA 25 -3.171 38.099 13.864 1.00 1.05 ATOM 346 C ALA 25 -2.194 37.436 16.119 1.00 1.05 ATOM 347 O ALA 25 -1.836 38.309 16.917 1.00 1.05 ATOM 348 N ASN 26 -2.782 36.300 16.505 1.00 1.71 ATOM 350 CA ASN 26 -3.000 35.955 17.907 1.00 1.71 ATOM 352 CB ASN 26 -3.763 34.622 17.939 1.00 1.71 ATOM 355 CG ASN 26 -4.261 34.272 19.327 1.00 1.71 ATOM 356 OD1 ASN 26 -5.313 34.712 19.751 1.00 1.71 ATOM 357 ND2 ASN 26 -3.548 33.474 20.086 1.00 1.71 ATOM 360 C ASN 26 -1.678 35.862 18.697 1.00 1.71 ATOM 361 O ASN 26 -1.585 36.446 19.777 1.00 1.71 ATOM 362 N GLU 27 -0.644 35.190 18.174 1.00 2.20 ATOM 364 CA GLU 27 0.633 35.017 18.883 1.00 2.20 ATOM 366 CB GLU 27 1.434 33.814 18.352 1.00 2.20 ATOM 369 CG GLU 27 0.777 32.463 18.676 1.00 2.20 ATOM 372 CD GLU 27 0.281 32.407 20.124 1.00 2.20 ATOM 373 OE1 GLU 27 -0.923 32.667 20.360 1.00 2.20 ATOM 374 OE2 GLU 27 1.107 32.320 21.058 1.00 2.20 ATOM 375 C GLU 27 1.516 36.260 18.954 1.00 2.20 ATOM 376 O GLU 27 2.126 36.496 20.001 1.00 2.20 ATOM 377 N LEU 28 1.502 37.121 17.933 1.00 2.16 ATOM 379 CA LEU 28 2.060 38.474 18.065 1.00 2.16 ATOM 381 CB LEU 28 2.606 38.962 16.703 1.00 2.16 ATOM 384 CG LEU 28 4.150 38.945 16.625 1.00 2.16 ATOM 386 CD1 LEU 28 4.765 37.589 16.985 1.00 2.16 ATOM 390 CD2 LEU 28 4.636 39.320 15.222 1.00 2.16 ATOM 394 C LEU 28 1.126 39.458 18.792 1.00 2.16 ATOM 395 O LEU 28 1.410 40.655 18.819 1.00 2.16 ATOM 396 N ARG 29 0.044 38.956 19.416 1.00 2.42 ATOM 398 CA ARG 29 -0.941 39.682 20.243 1.00 2.42 ATOM 400 CB ARG 29 -0.318 40.046 21.613 1.00 2.42 ATOM 403 CG ARG 29 0.464 38.919 22.323 1.00 2.42 ATOM 406 CD ARG 29 -0.395 37.704 22.706 1.00 2.42 ATOM 409 NE ARG 29 0.446 36.525 23.011 1.00 2.42 ATOM 411 CZ ARG 29 0.218 35.272 22.646 1.00 2.42 ATOM 412 NH1 ARG 29 1.114 34.354 22.857 1.00 2.42 ATOM 415 NH2 ARG 29 -0.873 34.901 22.045 1.00 2.42 ATOM 418 C ARG 29 -1.583 40.892 19.548 1.00 2.42 ATOM 419 O ARG 29 -2.234 41.706 20.200 1.00 2.42 ATOM 420 N VAL 30 -1.443 40.996 18.228 1.00 2.19 ATOM 422 CA VAL 30 -2.049 42.045 17.409 1.00 2.19 ATOM 424 CB VAL 30 -1.199 42.423 16.184 1.00 2.19 ATOM 426 CG1 VAL 30 -0.025 43.306 16.621 1.00 2.19 ATOM 430 CG2 VAL 30 -0.639 41.222 15.413 1.00 2.19 ATOM 434 C VAL 30 -3.475 41.635 17.081 1.00 2.19 ATOM 435 O VAL 30 -3.781 41.170 15.984 1.00 2.19 ATOM 436 N THR 31 -4.346 41.781 18.085 1.00 2.34 ATOM 438 CA THR 31 -5.752 41.354 18.050 1.00 2.34 ATOM 440 CB THR 31 -6.538 41.824 19.283 1.00 2.34 ATOM 442 CG2 THR 31 -5.994 41.237 20.584 1.00 2.34 ATOM 446 OG1 THR 31 -6.476 43.221 19.398 1.00 2.34 ATOM 448 C THR 31 -6.478 41.802 16.787 1.00 2.34 ATOM 449 O THR 31 -7.360 41.083 16.329 1.00 2.34 ATOM 450 N GLU 32 -6.082 42.916 16.160 1.00 3.54 ATOM 452 CA GLU 32 -6.766 43.519 15.010 1.00 3.54 ATOM 454 CB GLU 32 -6.786 45.056 15.120 1.00 3.54 ATOM 457 CG GLU 32 -7.360 45.552 16.467 1.00 3.54 ATOM 460 CD GLU 32 -8.605 44.763 16.911 1.00 3.54 ATOM 461 OE1 GLU 32 -9.625 44.771 16.189 1.00 3.54 ATOM 462 OE2 GLU 32 -8.522 43.991 17.893 1.00 3.54 ATOM 463 C GLU 32 -6.426 42.929 13.627 1.00 3.54 ATOM 464 O GLU 32 -6.374 43.638 12.626 1.00 3.54 ATOM 465 N ARG 33 -6.281 41.596 13.602 1.00 2.82 ATOM 467 CA ARG 33 -6.658 40.641 12.531 1.00 2.82 ATOM 469 CB ARG 33 -7.956 41.063 11.783 1.00 2.82 ATOM 472 CG ARG 33 -9.293 40.650 12.455 1.00 2.82 ATOM 475 CD ARG 33 -9.345 41.033 13.941 1.00 2.82 ATOM 478 NE ARG 33 -10.690 41.153 14.541 1.00 2.82 ATOM 480 CZ ARG 33 -10.899 41.732 15.719 1.00 2.82 ATOM 481 NH1 ARG 33 -12.082 42.121 16.094 1.00 2.82 ATOM 484 NH2 ARG 33 -9.954 41.938 16.579 1.00 2.82 ATOM 487 C ARG 33 -5.431 40.176 11.688 1.00 2.82 ATOM 488 O ARG 33 -4.323 40.735 11.762 1.00 2.82 ATOM 489 N PRO 34 -5.608 39.112 10.873 1.00 3.28 ATOM 490 CD PRO 34 -6.698 38.134 10.937 1.00 3.28 ATOM 493 CG PRO 34 -6.411 37.089 9.860 1.00 3.28 ATOM 496 CB PRO 34 -5.551 37.876 8.880 1.00 3.28 ATOM 499 CA PRO 34 -4.673 38.704 9.822 1.00 3.28 ATOM 501 C PRO 34 -3.996 39.847 9.039 1.00 3.28 ATOM 502 O PRO 34 -2.863 39.696 8.579 1.00 3.28 ATOM 503 N PHE 35 -4.660 41.008 8.903 1.00 2.83 ATOM 505 CA PHE 35 -4.068 42.270 8.442 1.00 2.83 ATOM 507 CB PHE 35 -5.051 43.418 8.693 1.00 2.83 ATOM 510 CG PHE 35 -4.474 44.808 8.932 1.00 2.83 ATOM 511 CD1 PHE 35 -3.626 45.410 7.985 1.00 2.83 ATOM 513 CE1 PHE 35 -3.079 46.683 8.228 1.00 2.83 ATOM 515 CZ PHE 35 -3.390 47.368 9.414 1.00 2.83 ATOM 517 CE2 PHE 35 -4.251 46.779 10.355 1.00 2.83 ATOM 519 CD2 PHE 35 -4.782 45.500 10.120 1.00 2.83 ATOM 521 C PHE 35 -2.731 42.618 9.095 1.00 2.83 ATOM 522 O PHE 35 -1.785 42.969 8.386 1.00 2.83 ATOM 523 N TRP 36 -2.634 42.541 10.421 1.00 2.42 ATOM 525 CA TRP 36 -1.439 43.017 11.102 1.00 2.42 ATOM 527 CB TRP 36 -1.668 43.198 12.600 1.00 2.42 ATOM 530 CG TRP 36 -2.175 44.549 12.970 1.00 2.42 ATOM 531 CD1 TRP 36 -3.324 44.806 13.623 1.00 2.42 ATOM 533 NE1 TRP 36 -3.458 46.168 13.800 1.00 2.42 ATOM 535 CE2 TRP 36 -2.401 46.862 13.256 1.00 2.42 ATOM 536 CZ2 TRP 36 -2.092 48.226 13.166 1.00 2.42 ATOM 538 CH2 TRP 36 -0.910 48.617 12.516 1.00 2.42 ATOM 540 CZ3 TRP 36 -0.046 47.643 11.985 1.00 2.42 ATOM 542 CE3 TRP 36 -0.359 46.274 12.098 1.00 2.42 ATOM 544 CD2 TRP 36 -1.553 45.849 12.722 1.00 2.42 ATOM 545 C TRP 36 -0.250 42.124 10.847 1.00 2.42 ATOM 546 O TRP 36 0.825 42.667 10.596 1.00 2.42 ATOM 547 N ILE 37 -0.418 40.793 10.812 1.00 1.60 ATOM 549 CA ILE 37 0.767 39.966 10.461 1.00 1.60 ATOM 551 CB ILE 37 0.921 38.680 11.299 1.00 1.60 ATOM 553 CG2 ILE 37 2.278 37.995 11.025 1.00 1.60 ATOM 557 CG1 ILE 37 0.863 39.035 12.802 1.00 1.60 ATOM 560 CD1 ILE 37 1.876 40.090 13.277 1.00 1.60 ATOM 564 C ILE 37 1.019 39.874 8.956 1.00 1.60 ATOM 565 O ILE 37 2.156 39.665 8.540 1.00 1.60 ATOM 566 N SER 38 0.028 40.173 8.117 1.00 1.81 ATOM 568 CA SER 38 0.269 40.485 6.699 1.00 1.81 ATOM 570 CB SER 38 -1.033 40.729 5.938 1.00 1.81 ATOM 573 OG SER 38 -1.911 39.641 6.110 1.00 1.81 ATOM 575 C SER 38 1.163 41.708 6.533 1.00 1.81 ATOM 576 O SER 38 2.031 41.714 5.671 1.00 1.81 ATOM 577 N SER 39 0.979 42.726 7.372 1.00 2.58 ATOM 579 CA SER 39 1.762 43.962 7.323 1.00 2.58 ATOM 581 CB SER 39 1.032 45.079 8.072 1.00 2.58 ATOM 584 OG SER 39 -0.267 45.194 7.527 1.00 2.58 ATOM 586 C SER 39 3.183 43.750 7.856 1.00 2.58 ATOM 587 O SER 39 4.165 44.161 7.236 1.00 2.58 ATOM 588 N PHE 40 3.291 43.036 8.979 1.00 2.22 ATOM 590 CA PHE 40 4.549 42.652 9.616 1.00 2.22 ATOM 592 CB PHE 40 4.218 41.919 10.925 1.00 2.22 ATOM 595 CG PHE 40 5.339 41.839 11.941 1.00 2.22 ATOM 596 CD1 PHE 40 5.373 42.742 13.024 1.00 2.22 ATOM 598 CE1 PHE 40 6.338 42.599 14.039 1.00 2.22 ATOM 600 CZ PHE 40 7.272 41.552 13.975 1.00 2.22 ATOM 602 CE2 PHE 40 7.260 40.672 12.879 1.00 2.22 ATOM 604 CD2 PHE 40 6.297 40.810 11.865 1.00 2.22 ATOM 606 C PHE 40 5.424 41.817 8.688 1.00 2.22 ATOM 607 O PHE 40 6.565 42.201 8.468 1.00 2.22 ATOM 608 N ILE 41 4.872 40.762 8.079 1.00 1.81 ATOM 610 CA ILE 41 5.537 40.017 7.005 1.00 1.81 ATOM 612 CB ILE 41 4.690 38.820 6.547 1.00 1.81 ATOM 614 CG2 ILE 41 4.995 38.390 5.097 1.00 1.81 ATOM 618 CG1 ILE 41 4.874 37.681 7.576 1.00 1.81 ATOM 621 CD1 ILE 41 6.218 36.945 7.524 1.00 1.81 ATOM 625 C ILE 41 5.910 40.929 5.857 1.00 1.81 ATOM 626 O ILE 41 7.044 40.869 5.396 1.00 1.81 ATOM 627 N GLY 42 4.998 41.806 5.459 1.00 3.75 ATOM 629 CA GLY 42 5.263 42.796 4.447 1.00 3.75 ATOM 632 C GLY 42 6.532 43.587 4.682 1.00 3.75 ATOM 633 O GLY 42 7.142 43.950 3.700 1.00 3.75 ATOM 634 N ARG 43 6.955 43.829 5.937 1.00 5.13 ATOM 636 CA ARG 43 8.029 44.782 6.293 1.00 5.13 ATOM 638 CB ARG 43 8.149 44.941 7.813 1.00 5.13 ATOM 641 CG ARG 43 6.930 45.592 8.469 1.00 5.13 ATOM 644 CD ARG 43 7.214 46.013 9.920 1.00 5.13 ATOM 647 NE ARG 43 7.481 44.869 10.815 1.00 5.13 ATOM 649 CZ ARG 43 8.651 44.322 11.096 1.00 5.13 ATOM 650 NH1 ARG 43 8.727 43.424 12.028 1.00 5.13 ATOM 653 NH2 ARG 43 9.760 44.647 10.490 1.00 5.13 ATOM 656 C ARG 43 9.453 44.638 5.711 1.00 5.13 ATOM 657 O ARG 43 10.245 45.556 5.931 1.00 5.13 ATOM 658 N SER 44 9.801 43.579 4.993 1.00 6.98 ATOM 660 CA SER 44 10.961 43.585 4.082 1.00 6.98 ATOM 662 CB SER 44 11.896 42.386 4.310 1.00 6.98 ATOM 665 OG SER 44 12.376 42.406 5.636 1.00 6.98 ATOM 667 C SER 44 10.337 43.623 2.615 1.00 6.98 ATOM 668 O SER 44 10.700 42.732 1.849 1.00 6.98 ATOM 669 N LYS 45 9.358 44.433 2.066 1.00 3.72 ATOM 671 CA LYS 45 8.725 45.820 2.208 1.00 3.72 ATOM 673 CB LYS 45 9.952 46.757 2.450 1.00 3.72 ATOM 676 CG LYS 45 9.884 48.303 2.405 1.00 3.72 ATOM 679 CD LYS 45 10.223 48.926 1.031 1.00 3.72 ATOM 682 CE LYS 45 10.146 50.468 1.000 1.00 3.72 ATOM 685 NZ LYS 45 8.759 50.981 0.925 1.00 3.72 ATOM 689 C LYS 45 7.930 46.232 0.971 1.00 3.72 ATOM 690 O LYS 45 7.843 45.456 0.023 1.00 3.72 TER END